MC05g0242 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0242
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	sister chromatid cohesion protein DCC1
Location	MC05: 1734676 .. 1737414 (+)
RNA-Seq Expression	MC05g0242
Synteny	MC05g0242

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGGCCGACCTGTATCAGTTTCTGTAGTAAGTTTTTCGCTCCCGCCGTTTCGCTTTTTCTCTTCATTCATTGCTGATGTTCAAATCTGAAGTGTCGTCTGTGTAATCTTAGGTTTGTTTCTGAATCTGTAATTGTTTTTTTAGTTTCTTCAGTTTCTCCCGAAGACGATGAATGAAATGATAGAGGAGGTAATTATGTTGATGATCGGACTTGAAACGTTGCGTCTAGCAGCTTTAATTTGATTGATTTGTGTTGCAAACTTGTTCTAGGGTTTCGTTTTATATTCCATAGATTTGTGTTTCGAACTCTTCTTTGTCCCTCTTACAAACATGTTCTAGGGTTTCGTTTTATAGTTGATAGATTTATGTTACGAACTCTTATTTCTCCCTCTTACTCTATTCCAAGCGATACATGGTTAGGACAACGCACAAATCTCTCTCTCACGGTCACTTTGCTATTCTCTCCCCCTCACCTCCTAGTTCCCTTCATCTACAGGCCTCGAGCAGCCGACACTACGGATTCTTTTAGCAAAAATGTGGCGGGCGAGTAATATGGTTTATGGAATCTTGATTGTCTAGATACTCGAAAGGCCTCGCACACAATGTTAAGGTCAATTGGTTTTTGTTAGATACAGAGAATTAAGATCTACATTTTTCATTATCTATCCCAATCTTGTGGAAGCCTTCTCATGGTTGCGTTAGGTTTTATGGCTTTCTGTATATACAATATTTAGTTAGTTCATGACTATTCAATGTTGGGATTAATGGTCATCTCGACAAGTGGTTAGACATAGCCCACTTAATACATTTTGATTCATTTTTGGAAGATGGAGCAGCAACTTCCGAATGGAAGTGGAGCCGATGCAGTTTTACATCTTCGGACAAACTCCTCCATTTCTATTGCATATCATTCACTCTTTGGTCCACATGATGATTTAGTCCTCCTTGAGGTCGACGAAAAGCTTCTGGAAGAAGTTCTCCACCAACGGTAAACAGGGGTGGCCTTAAGTTACTTGCTAATCTCTTAGAACTATTTGAATTGGTCTAACTTTGGGGTTTTCTTTTCTCAGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCCGTCTTTTGCACTAAGTCAAAAACTTATGGAATCAAATATGTTGGAACTTCCAATTCTGTACTCCTCATACCCCCATCAGGTCGTTTGGAATATTATGAGAATGATCTTGATAGCCATGGGAAGGATAGCAGTAGGAAAGTTGCATCTGTGATCAAAGTTGCTCCTGGCATCATGGAACTTGTTGAGATTGCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGAAACCTTACAGCTTAGCCGATGAGTGGGAAAGCGATGAGGTGGACAAATATGAAAAAAAGCTGTATAATTGGGATGATCTTATCAACAAGATTCAAGCTAGCGATGATGAAATGAAAGCCGGATTACAAGAACTTTCTGCGGTTGAGATTGACGGGTACTGGAGAGTTGTGGATGAAAAATACATGGACTCCATACTACAGATGCTTTTGCATAACGCAGTTTTGAATGACTGGTCACTGGACGCACTTAATGAAAATGAAGTTATGAAAGTTATGGAAGTAGATGGCTTTCCTGAAAAGCTTGTGCGTCATTGTCTCCATGTTTATGGCGATAAATTGGATGAAGATGAGTGCAAGAGCTGTTTATGGAGATTGGACCAAAAACGGGTATGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAGGGAAAGATGAAGTTGGAGAGTTTCATGGATGAATGGACACGGAAAATCCCACTAGGAATGCGTGCTGTCTTTGACCTGTTGGAAGGTGAAGTTCTGACTGAGAGGATCGGTGTCGAGACATGGGTTCGCGGTTTCAGAGTTTCTTCATTGCCATCAAATCCCGCTGAGCGTTTCTCCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAGGATCTGCAGCCCTACATCAGGTTTGTTTGTGTCTTATTGATTATTTGTTACTTATACAGAAAGTTTTAACAACTGTATTGTGATTTCCAGGGATCTTACCGTTCCAGGTCTTTCATCAGAGGGTTTGCTTCTGAAATACACCCGAAGAACCCAACCGAACCCCAATTCAGAACCTGTGTTCAGTGCAAGATGATGATATGATGTGCCATGGCCTCACTTGCTCCTAATGACAGGTTTGGTAGATTGTTCAATGTCACATCTGGCTTAGGCTTATCGTATTTATGTACCCGAAATCTTGCAGTTTCAATGGAGAAATCTACTCGATCGCGATCACAGACGACGTTATAATAAGTACCCTTTAACTTTGCATGGTCTAGAGGGCTCCATTACTCCCAGAATAGAGATCCAAAGGTTCCCCATTATCAGAAGTCTCTATTTCAGTTTCAGGCATGGAAAGGGAAACCTTGAGGAGAAGCAAATTTTTAATGTGCTCTCAGAGTTTGTATAAGTCAGATCAAATGGCTATTGGAAGGTGAAAGTAGGGAAAAAGACCTGCTCTAAAGGTTTCTACTTTCTACTTTCAAAATTAGCCTGGCCCTGTACATAGTCTTTTGAAACAAATTGTGTGTGAGAAATGAGAATCAAACATTTTCATGAAATTTTAATATCTGGTTGAAGTTTTGAAGTTCTAAATTTTCAACGTTTCCTCGATGTCATTGTCAAAATATTATAAATAATGTAAAATAAATATCATGAGATAATATTGAAAAC

mRNA sequence

CTCGGCCGACCTGTATCAGTTTCTGTATTTCTTCAGTTTCTCCCGAAGACGATGAATGAAATGATAGAGGAGATGGAGCAGCAACTTCCGAATGGAAGTGGAGCCGATGCAGTTTTACATCTTCGGACAAACTCCTCCATTTCTATTGCATATCATTCACTCTTTGGTCCACATGATGATTTAGTCCTCCTTGAGGTCGACGAAAAGCTTCTGGAAGAAGTTCTCCACCAACGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCCGTCTTTTGCACTAAGTCAAAAACTTATGGAATCAAATATGTTGGAACTTCCAATTCTGTACTCCTCATACCCCCATCAGGTCGTTTGGAATATTATGAGAATGATCTTGATAGCCATGGGAAGGATAGCAGTAGGAAAGTTGCATCTGTGATCAAAGTTGCTCCTGGCATCATGGAACTTGTTGAGATTGCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGAAACCTTACAGCTTAGCCGATGAGTGGGAAAGCGATGAGGTGGACAAATATGAAAAAAAGCTGTATAATTGGGATGATCTTATCAACAAGATTCAAGCTAGCGATGATGAAATGAAAGCCGGATTACAAGAACTTTCTGCGGTTGAGATTGACGGGTACTGGAGAGTTGTGGATGAAAAATACATGGACTCCATACTACAGATGCTTTTGCATAACGCAGTTTTGAATGACTGGTCACTGGACGCACTTAATGAAAATGAAGTTATGAAAGTTATGGAAGTAGATGGCTTTCCTGAAAAGCTTGTGCGTCATTGTCTCCATGTTTATGGCGATAAATTGGATGAAGATGAGTGCAAGAGCTGTTTATGGAGATTGGACCAAAAACGGGTATGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAGGGAAAGATGAAGTTGGAGAGTTTCATGGATGAATGGACACGGAAAATCCCACTAGGAATGCGTGCTGTCTTTGACCTGTTGGAAGGTGAAGTTCTGACTGAGAGGATCGGTGTCGAGACATGGGTTCGCGGTTTCAGAGTTTCTTCATTGCCATCAAATCCCGCTGAGCGTTTCTCCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAGGATCTGCAGCCCTACATCAGGGATCTTACCGTTCCAGGTCTTTCATCAGAGGGTTTGCTTCTGAAATACACCCGAAGAACCCAACCGAACCCCAATTCAGAACCTGTGTTCAGTGCAAGATGATGATATGATGTGCCATGGCCTCACTTGCTCCTAATGACAGTTTCAATGGAGAAATCTACTCGATCGCGATCACAGACGACGTTATAATAAGTACCCTTTAACTTTGCATGGTCTAGAGGGCTCCATTACTCCCAGAATAGAGATCCAAAGGTTCCCCATTATCAGAAGTCTCTATTTCAGTTTCAGGCATGGAAAGGGAAACCTTGAGGAGAAGCAAATTTTTAATGTGCTCTCAGAGTTTGTATAAGTCAGATCAAATGGCTATTGGAAGGTGAAAGTAGGGAAAAAGACCTGCTCTAAAGGTTTCTACTTTCTACTTTCAAAATTAGCCTGGCCCTGTACATAGTCTTTTGAAACAAATTGTGTGTGAGAAATGAGAATCAAACATTTTCATGAAATTTTAATATCTGGTTGAAGTTTTGAAGTTCTAAATTTTCAACGTTTCCTCGATGTCATTGTCAAAATATTATAAATAATGTAAAATAAATATCATGAGATAATATTGAAAAC

Coding sequence (CDS)

ATGAATGAAATGATAGAGGAGATGGAGCAGCAACTTCCGAATGGAAGTGGAGCCGATGCAGTTTTACATCTTCGGACAAACTCCTCCATTTCTATTGCATATCATTCACTCTTTGGTCCACATGATGATTTAGTCCTCCTTGAGGTCGACGAAAAGCTTCTGGAAGAAGTTCTCCACCAACGAGTAAGCATCAGAGGACAGCCAGAAGAAGATGCCGTCTTTTGCACTAAGTCAAAAACTTATGGAATCAAATATGTTGGAACTTCCAATTCTGTACTCCTCATACCCCCATCAGGTCGTTTGGAATATTATGAGAATGATCTTGATAGCCATGGGAAGGATAGCAGTAGGAAAGTTGCATCTGTGATCAAAGTTGCTCCTGGCATCATGGAACTTGTTGAGATTGCTCCCAGGATTGATAAGCTTAAATTGCTTCTCTCAGAGAAACCTTACAGCTTAGCCGATGAGTGGGAAAGCGATGAGGTGGACAAATATGAAAAAAAGCTGTATAATTGGGATGATCTTATCAACAAGATTCAAGCTAGCGATGATGAAATGAAAGCCGGATTACAAGAACTTTCTGCGGTTGAGATTGACGGGTACTGGAGAGTTGTGGATGAAAAATACATGGACTCCATACTACAGATGCTTTTGCATAACGCAGTTTTGAATGACTGGTCACTGGACGCACTTAATGAAAATGAAGTTATGAAAGTTATGGAAGTAGATGGCTTTCCTGAAAAGCTTGTGCGTCATTGTCTCCATGTTTATGGCGATAAATTGGATGAAGATGAGTGCAAGAGCTGTTTATGGAGATTGGACCAAAAACGGGTATGTGTGCATTTTGCAAGAGAAGTCTTGAGGAAGGGAAAGATGAAGTTGGAGAGTTTCATGGATGAATGGACACGGAAAATCCCACTAGGAATGCGTGCTGTCTTTGACCTGTTGGAAGGTGAAGTTCTGACTGAGAGGATCGGTGTCGAGACATGGGTTCGCGGTTTCAGAGTTTCTTCATTGCCATCAAATCCCGCTGAGCGTTTCTCCATTTTGTTTAAAGAGCGACCAAAATGGGAGTGGAAGGATCTGCAGCCCTACATCAGGGATCTTACCGTTCCAGGTCTTTCATCAGAGGGTTTGCTTCTGAAATACACCCGAAGAACCCAACCGAACCCCAATTCAGAACCTGTGTTCAGTGCAAGATGA

Protein sequence

MNEMIEEMEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAPGIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMKAGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPEKLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPLGMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR

Homology

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BLAST of MC05g0242 vs. ExPASy Swiss-Prot
Match: Q14AI0 (Sister chromatid cohesion protein DCC1 OS=Mus musculus OX=10090 GN=DSCC1 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.0e-40
Identity = 110/351 (31.34%), Postives = 172/351 (49.00%), Query Frame = 0


Query: 43  DLVLLEVDEKLLEEV-LHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRL 102
           D  LLE++  L +++       IRG  +E AV C+K KTY +K   TSN +L IP     
Sbjct: 48  DFCLLELEPALCQQLEAGDSFVIRGDKDEQAVLCSKDKTYDLKIADTSNMLLFIPGCKT- 107

Query: 103 EYYENDLDSHGKDSSRKVASVIKVAPGIMELVEIAPRIDKLKLLLSEKPYSLADEWESDE 162
               + L      S+     +   +    EL    P++ KLK LL E  Y   D  + ++
Sbjct: 108 ---PDQLKEEETPSAIVHTEIFGFSNNYWELRRCRPKLKKLKRLLMENTYEGPDSQKEED 167

Query: 163 VDKYEKKLYNWDDLINKIQASDDEMKAGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNA 222
             + +   Y  +DL+N IQAS++E+ A LQ L+A EI GYWR+++  Y   +L  +    
Sbjct: 168 ASRSK---YTTEDLLNHIQASEEEIMAQLQVLNACEIGGYWRILEFDYEIKLLNHVTQLV 227

Query: 223 VLNDWSLDALNENEVMKVMEVDGFPEKLVRHCLHVYGDK-LDEDECKSCLWRLDQKRVCV 282
               WSLD +     ++ +     PE+++ HCL  YG + +D+D+     + LD  ++C 
Sbjct: 228 DSESWSLDRVPLTVCLQELG-PLEPEEMIEHCLKCYGKRYVDKDD---VYFELDADKICR 287

Query: 283 HFAREVLRKG-KMKLESFMDEWTRKIPLGMRAVFDLLEGEVLTERIGVETWVRGFRVSSL 342
             A  +L+   K  L  F + W + +P GM    D L+G  L +R      +   +V  L
Sbjct: 288 VTAEMLLQNAVKFNLAEFQEVWQQSVPEGMTTRLDQLKGLALVDRNSRPEIIFLLKVDDL 347

Query: 343 PSNPAERFSILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPN 391
           P    +RF+ LF  R KW  +D+ PYI+DL     +   LL KY+R +  N
Sbjct: 348 PEGTQDRFNSLFSLREKWTEEDITPYIQDLCGEKQTIGALLTKYSRSSMQN 387

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BLAST of MC05g0242 vs. ExPASy Swiss-Prot
Match: Q9BVC3 (Sister chromatid cohesion protein DCC1 OS=Homo sapiens OX=9606 GN=DSCC1 PE=1 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 3.9e-40
Identity = 123/384 (32.03%), Postives = 187/384 (48.70%), Query Frame = 0


Query: 19  DAVLHLRTNSSISI--AYHSL-FGP------HDDLVLLEVDEKLLEEVLH-QRVSIRGQP 78
           DA L +   ++  +  A H L FGP        D  LLE++  L +++     + IRG  
Sbjct: 9   DATLQIAKLNAAELLPAVHCLGFGPGASGAAAGDFCLLELEPTLCQQLEDGHSLVIRGDK 68

Query: 79  EEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAPG 138
           +E AV C+K KTY +K   TSN +L IP     +  + + DSH    +     +   +  
Sbjct: 69  DEQAVLCSKDKTYDLKIADTSNMLLFIPGCKTPDQLKKE-DSH---CNIIHTEIFGFSNN 128

Query: 139 IMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMKA 198
             EL    P++ KLK LL E PY   D     E D    K Y  +DL+++IQAS++E+  
Sbjct: 129 YWELRRRRPKLKKLKKLLMENPYEGPD--SQKEKDSNSSK-YTTEDLLDQIQASEEEIMT 188

Query: 199 GLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPEK 258
            LQ L+A +I GYWR+++  Y   +L  +        WS   +  N  ++ +     PE+
Sbjct: 189 QLQVLNACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVPLNTCLQELG-PLEPEE 248

Query: 259 LVRHCLHVYGDK-LDEDECKSCLWRLDQKRVCVHFAREVLRKG-KMKLESFMDEWTRKIP 318
           ++ HCL  YG K +DE E     + LD  ++C   AR +L+   K  L  F + W + +P
Sbjct: 249 MIEHCLKCYGKKYVDEGE---VYFELDADKICRAAARMLLQNAVKFNLAEFQEVWQQSVP 308

Query: 319 LGMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYI 378
            GM    D L+G  L +R      +   +V  LP +  ERF+ LF  R KW  +D+ PYI
Sbjct: 309 EGMVTSLDQLKGLALVDRHSRPEIIFLLKVDDLPEDNQERFNSLFSLREKWTEEDIAPYI 368

Query: 379 RDLTVPGLSSEGLLLKYTRRTQPN 391
           +DL     +   LL KY+  +  N
Sbjct: 369 QDLCGEKQTIGALLTKYSHSSMQN 381

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BLAST of MC05g0242 vs. ExPASy Swiss-Prot
Match: Q66I84 (Sister chromatid cohesion protein DCC1 OS=Danio rerio OX=7955 GN=dscc1 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-39
Identity = 109/351 (31.05%), Postives = 170/351 (48.43%), Query Frame = 0


Query: 43  DLVLLEVDEKLLEEV-LHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRL 102
           D  L+EVDE L + +   + + IRG  +E AV C++ KTY +K   TSN +L +P     
Sbjct: 38  DYCLMEVDENLCKHIESGKSLIIRGDKDEHAVLCSEDKTYDLKIADTSNLLLFVPGCKT- 97

Query: 103 EYYENDLDSHGKDSSRKVASVIKVAPGIMELVEIAPRIDKLKLLLSEKPYSLADEWESDE 162
               + L             +   +    EL    PR+ KLK LL E PY        +E
Sbjct: 98  ---PDQLSDIPASPQLMHTQIWGFSNCYWELRRQRPRLKKLKKLLMENPYDGPPVGMQEE 157

Query: 163 VDKYEKKLYNWDDLINKIQASDDEMKAGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNA 222
               +   Y+ +DL+ +IQAS +E++A L  + A EIDG+WR++D  Y   +L  +    
Sbjct: 158 APGLK---YSMEDLLERIQASKEELEAHLGNVHACEIDGFWRILDFDYEMKLLGHVTQLV 217

Query: 223 VLNDWSLDALNENEVMKVMEVDGF-PEKLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCV 282
               WS   +  +  ++  E+    P+ ++ HCL+ YG +   DE    ++ LD+ +VC 
Sbjct: 218 DSESWSFSKVPLSVCLE--ELGSLEPKAMIEHCLNCYG-RRHSDEDNQVMYALDEDKVCR 277

Query: 283 HFAREVLRKG-KMKLESFMDEWTRKIPLGMRAVFDLLEGEVLTERIGVETWVRGFRVSSL 342
             A+ +L+   K  L  F + W + +P GM    D L G  L +R      +   RV  L
Sbjct: 278 ATAQLLLQNAVKFNLSEFQEVWQQSVPEGMGTRLDQLRGLALIDRSSKPETISLLRVEDL 337

Query: 343 PSNPAERFSILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPN 391
           P +  ERF+ LF  R KW   D++PYI+DL     ++  LL K+ R +  N
Sbjct: 338 PEDTLERFNSLFSLREKWTQDDIEPYIQDLCGEKQTTGALLTKHARSSMQN 378

[Close]

BLAST of MC05g0242 vs. ExPASy Swiss-Prot
Match: Q6GL75 (Sister chromatid cohesion protein DCC1 OS=Xenopus tropicalis OX=8364 GN=dscc1 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.0e-36
Identity = 100/350 (28.57%), Postives = 167/350 (47.71%), Query Frame = 0


Query: 43  DLVLLEVDEKLLEEV-LHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRL 102
           D  L+E+D+ L +++     + IRG   + AV C++ KTY +K   TSN +L IP     
Sbjct: 39  DYSLMELDDTLCKQIEAGDSLVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPGCKT- 98

Query: 103 EYYENDLDSHGKDSSRKVASVIKVAPGIMELVEIAPRIDKLKLLLSEKPYSLADEWESDE 162
               + L +  +  +     +   +    EL    P++ KLK LL E  Y+       +E
Sbjct: 99  ---PDQLPADQQPLTIINCEIAGFSNHYWELRRCRPKLKKLKKLLMENTYN----GPENE 158

Query: 163 VDKYEKKLYNWDDLINKIQASDDEMKAGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNA 222
            +  +  L+  +DL+N IQAS++E+   L+ + A  I+G+WR++D  Y   +L  +    
Sbjct: 159 RESQDNSLHTTEDLLNMIQASNEELVDHLKAIHACSINGFWRLLDFDYEMKLLNHITQLI 218

Query: 223 VLNDWSLDALNENEVMKVMEVDGFPEKLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVH 282
               WS   +     ++ +     PE+++ HCL  YG +L ++      + LD+ ++C  
Sbjct: 219 DSESWSFSKVPLPVCLQELR-SLEPEEMIEHCLTCYGKRLIDEGTGGDFFALDEDKICRA 278

Query: 283 FAREVLRKG-KMKLESFMDEWTRKIPLGMRAVFDLLEGEVLTERIGVETWVRGFRVSSLP 342
            A  +L+   K  L  F + W + +P GM    D L+G  L +R      +   +   LP
Sbjct: 279 TALMLLQNAVKFNLAEFQEVWQQSVPEGMNTRLDQLKGLALVDRTSRPETIFLLKTEDLP 338

Query: 343 SNPAERFSILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPN 391
            +  ERF+ LF  R KW   D+ PYI+DL     +   LL KY R +  N
Sbjct: 339 EDTQERFNTLFGMREKWAEADIAPYIKDLCGEKQTIGALLTKYARSSMQN 379

[Close]

BLAST of MC05g0242 vs. ExPASy Swiss-Prot
Match: Q6GMB0 (Sister chromatid cohesion protein DCC1 OS=Xenopus laevis OX=8355 GN=dscc1 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.4e-35
Identity = 104/350 (29.71%), Postives = 165/350 (47.14%), Query Frame = 0


Query: 43  DLVLLEVDEKLLEEV-LHQRVSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRL 102
           D  L+E+D+ L +++     + IRG   + AV C++ KTY +K   TSN +L IP     
Sbjct: 39  DYSLMELDDTLCKQIEAGDSLVIRGDKSDHAVLCSQDKTYDLKIADTSNLLLFIPGC--- 98

Query: 103 EYYENDLDSHGKDSSRKVASVIKVAPGIMELVEIAPRIDKLKLLLSEKPYSLADEWESDE 162
               + L +  +  S     +   +    EL    P++ KLK LL E  Y+     E++ 
Sbjct: 99  -KLPDQLPADQQPLSVIHCEIAGFSNHYWELRRCRPKLKKLKKLLMENTYNGP---ENES 158

Query: 163 VDKYEKKLYNWDDLINKIQASDDEMKAGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNA 222
               E  LY  +DL++ IQ+S +E+   L+ + A  I G WR++D  Y   +L  +    
Sbjct: 159 ESSQETSLYTTEDLLSVIQSSTEELMDHLKAIHACNIKGIWRLLDFDYEMKLLNHITQLI 218

Query: 223 VLNDWSLDALNENEVMKVMEVDGFPEKLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVH 282
               WS   +     ++ +     PE+++ HCL  YG +L E E   C + LD+ ++C  
Sbjct: 219 DSESWSFSKVPLQVCLQELR-SLEPEEMIEHCLTCYGKRLME-EGGDC-FALDEDKICRA 278

Query: 283 FAREVLRKG-KMKLESFMDEWTRKIPLGMRAVFDLLEGEVLTERIGVETWVRGFRVSSLP 342
            A  +L+   K  L  F + W + +P GM    D L+G  L +R      +   +   LP
Sbjct: 279 TALMLLQNAVKFNLAEFQEVWQQSVPDGMNTRLDQLKGLALVDRTSRPETIFLLQTEDLP 338

Query: 343 SNPAERFSILFKERPKWEWKDLQPYIRDLTVPGLSSEGLLLKYTRRTQPN 391
            +  ERF+ LF  R KW   D+ PYI+DL     +   LL KY R +  N
Sbjct: 339 EDTQERFNTLFGMREKWTEADIAPYIQDLCGEKQTIGALLTKYARSSMQN 378

[Close]

BLAST of MC05g0242 vs. NCBI nr
Match: XP_022147138.1 (sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147139.1 sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147140.1 sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147141.1 sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147142.1 sister chromatid cohesion protein DCC1 [Momordica charantia])

HSP 1 Score: 798 bits (2060), Expect = 2.56e-291
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK
Sbjct: 121 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE
Sbjct: 181 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
           KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL
Sbjct: 241 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
           GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR
Sbjct: 301 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 393

[Close]

BLAST of MC05g0242 vs. NCBI nr
Match: XP_008438251.1 (PREDICTED: sister chromatid cohesion protein DCC1 [Cucumis melo] >KAA0049092.1 sister chromatid cohesion protein DCC1 [Cucumis melo var. makuwa] >TYK17471.1 sister chromatid cohesion protein DCC1 [Cucumis melo var. makuwa])

HSP 1 Score: 696 bits (1796), Expect = 4.37e-251
Identity = 336/393 (85.50%), Postives = 368/393 (93.64%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQQ P+G GADAVL+L+ NSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGR EYY+N+LDSH  D+S++VA VIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYKNELDSHQTDNSKEVAPVIKVAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMEL EIAPRIDKLKLLLSE+PYS ADEWE++  DKYEK++Y+WDDLINK+QASDDE+K
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSFADEWENEAADKYEKRMYSWDDLINKVQASDDELK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGLQ LSAVEIDGYWR+VDEKYMDS+LQMLLHN +LNDWSLDAL+E+ +MKVM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEDVIMKVMKMDGFPE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
           KLV+HCLHVYGDKLD +E KSCLWRLD+KRVCVHFAREVLRKGKMKLE  MDEW +KIPL
Sbjct: 241 KLVQHCLHVYGDKLDGNEGKSCLWRLDEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
           GM A FD+LEGEVLTER+GVETWVRGFRV  LPSNPAERF+ILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQPNP +E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of MC05g0242 vs. NCBI nr
Match: XP_004133954.1 (sister chromatid cohesion protein DCC1 [Cucumis sativus] >KGN56663.1 hypothetical protein Csa_010867 [Cucumis sativus])

HSP 1 Score: 692 bits (1786), Expect = 1.46e-249
Identity = 335/393 (85.24%), Postives = 366/393 (93.13%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQ+ P+G GADAVL+L+ NSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGR EYY N+LDSH KD+S++VA VIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMEL EIAPRIDKLKLLLSE+ YS ADEWE++ VDKYEK++YNWDDLINK+QASD+E+K
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGLQ LSAVEIDGYWR+VDEKYMDS+LQMLLHN +LNDWSLDAL+E  +M VM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
           KLV+HCLHVYGDKLDE E KSCLWRL++KRVCVHFAREVLRKGKMKLE  MDEW +KIPL
Sbjct: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
           GM A FD+LEGEVLTER+GVETWVRGFRV  LPSNPAERF+ILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQPNP +E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of MC05g0242 vs. NCBI nr
Match: XP_038879383.1 (sister chromatid cohesion protein DCC1 [Benincasa hispida] >XP_038879394.1 sister chromatid cohesion protein DCC1 [Benincasa hispida])

HSP 1 Score: 691 bits (1783), Expect = 4.18e-249
Identity = 336/393 (85.50%), Postives = 366/393 (93.13%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQQ  +G GADAVLHL+ NSSISIAYH LF PHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQYLHGRGADAVLHLQPNSSISIAYHPLFCPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
           PE+DAVFCTKS+TYGIKYVGTSNSVLLIPPSG  EYYEN+LDSH KD +++VA VIKVAP
Sbjct: 61  PEDDAVFCTKSRTYGIKYVGTSNSVLLIPPSGLSEYYENELDSHQKDGTKEVAHVIKVAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMEL EIAPRIDKLKLLLSE+PYSLADEWES EVDK+EK++YNWDDLINK+QASDDE+K
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSLADEWESKEVDKHEKRMYNWDDLINKVQASDDELK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGLQ LSAVEIDGYWRVVDEKYM+S+LQMLL+N +LNDWS DAL+E  +MKVM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRVVDEKYMESMLQMLLNNTILNDWSPDALDEGVIMKVMKMDGFPE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
           KLV+HCLHVYGDKLD DE KSCLWRLD+KRVCVHFAREVLR+GKMKLE FMDEW RKIPL
Sbjct: 241 KLVQHCLHVYGDKLDGDEGKSCLWRLDEKRVCVHFAREVLREGKMKLEHFMDEWRRKIPL 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
           GMRA FD+LEGEVLTER+GVETWVRGFRV SLPSNPAERF+ILF+ERPKWEWKDLQPYIR
Sbjct: 301 GMRANFDMLEGEVLTERLGVETWVRGFRVCSLPSNPAERFTILFRERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQ NP +E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQSNPEAEAVFSAR 393

[Close]

BLAST of MC05g0242 vs. NCBI nr
Match: KAG7028709.1 (Sister chromatid cohesion protein DCC1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 674 bits (1740), Expect = 1.48e-242
Identity = 325/393 (82.70%), Postives = 363/393 (92.37%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQQ P+G GADAVLHL+ NSS++IAYHSLFGPHDDLVLLEVDEKLLEEVLH+RVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLHLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
            EE+AVFCTKSKTYGIKYVGTSNSVLLIPPSGR EYYEN+LDSHG DS+++V  VIK+AP
Sbjct: 61  AEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSHGNDSTKEVVPVIKLAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMELVEIAPRIDKLKLLLSE PYSLADEWES+E+DK EK+ Y+W+DL++K+QASDDE+K
Sbjct: 121 GIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQKYSWNDLLDKVQASDDELK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGLQ LSAVEIDGYWR+VDE+YMDS+LQMLL+N +LNDWSLDAL+E  +MKVM++DGF E
Sbjct: 181 AGLQALSAVEIDGYWRLVDEQYMDSMLQMLLNNRILNDWSLDALDEVVLMKVMKMDGFSE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
            LV HCL VYGDKL+ DE  SCLWRLD+KRVCVHFAREVLRKGKMK+E FMDEW +KIP+
Sbjct: 241 TLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPV 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
            M A FD+LEGEVLTER+GVETWVRGFRVSSLP NP ERFSILF+ERPKWEWKDLQPYIR
Sbjct: 301 EMHANFDMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQPNP +EPVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEPVFSAR 393

[Close]

BLAST of MC05g0242 vs. ExPASy TrEMBL
Match: A0A6J1CZB2 (sister chromatid cohesion protein DCC1 OS=Momordica charantia OX=3673 GN=LOC111016141 PE=3 SV=1)

HSP 1 Score: 798 bits (2060), Expect = 1.24e-291
Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK
Sbjct: 121 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE
Sbjct: 181 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
           KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL
Sbjct: 241 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
           GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR
Sbjct: 301 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 393

[Close]

BLAST of MC05g0242 vs. ExPASy TrEMBL
Match: A0A5D3CZT5 (Sister chromatid cohesion protein DCC1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003360 PE=3 SV=1)

HSP 1 Score: 696 bits (1796), Expect = 2.12e-251
Identity = 336/393 (85.50%), Postives = 368/393 (93.64%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQQ P+G GADAVL+L+ NSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGR EYY+N+LDSH  D+S++VA VIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYKNELDSHQTDNSKEVAPVIKVAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMEL EIAPRIDKLKLLLSE+PYS ADEWE++  DKYEK++Y+WDDLINK+QASDDE+K
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSFADEWENEAADKYEKRMYSWDDLINKVQASDDELK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGLQ LSAVEIDGYWR+VDEKYMDS+LQMLLHN +LNDWSLDAL+E+ +MKVM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEDVIMKVMKMDGFPE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
           KLV+HCLHVYGDKLD +E KSCLWRLD+KRVCVHFAREVLRKGKMKLE  MDEW +KIPL
Sbjct: 241 KLVQHCLHVYGDKLDGNEGKSCLWRLDEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
           GM A FD+LEGEVLTER+GVETWVRGFRV  LPSNPAERF+ILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQPNP +E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of MC05g0242 vs. ExPASy TrEMBL
Match: A0A1S3AWK7 (sister chromatid cohesion protein DCC1 OS=Cucumis melo OX=3656 GN=LOC103483416 PE=3 SV=1)

HSP 1 Score: 696 bits (1796), Expect = 2.12e-251
Identity = 336/393 (85.50%), Postives = 368/393 (93.64%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQQ P+G GADAVL+L+ NSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGR EYY+N+LDSH  D+S++VA VIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYKNELDSHQTDNSKEVAPVIKVAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMEL EIAPRIDKLKLLLSE+PYS ADEWE++  DKYEK++Y+WDDLINK+QASDDE+K
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEPYSFADEWENEAADKYEKRMYSWDDLINKVQASDDELK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGLQ LSAVEIDGYWR+VDEKYMDS+LQMLLHN +LNDWSLDAL+E+ +MKVM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEDVIMKVMKMDGFPE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
           KLV+HCLHVYGDKLD +E KSCLWRLD+KRVCVHFAREVLRKGKMKLE  MDEW +KIPL
Sbjct: 241 KLVQHCLHVYGDKLDGNEGKSCLWRLDEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
           GM A FD+LEGEVLTER+GVETWVRGFRV  LPSNPAERF+ILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQPNP +E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of MC05g0242 vs. ExPASy TrEMBL
Match: A0A0A0L4H9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127250 PE=3 SV=1)

HSP 1 Score: 692 bits (1786), Expect = 7.06e-250
Identity = 335/393 (85.24%), Postives = 366/393 (93.13%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQ+ P+G GADAVL+L+ NSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ
Sbjct: 1   MEQKNPHGKGADAVLNLQPNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
           PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGR EYY N+LDSH KD+S++VA VIKVAP
Sbjct: 61  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYTNELDSHQKDNSKEVAPVIKVAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMEL EIAPRIDKLKLLLSE+ YS ADEWE++ VDKYEK++YNWDDLINK+QASD+E+K
Sbjct: 121 GIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGLQ LSAVEIDGYWR+VDEKYMDS+LQMLLHN +LNDWSLDAL+E  +M VM++DGFPE
Sbjct: 181 AGLQALSAVEIDGYWRIVDEKYMDSMLQMLLHNRILNDWSLDALDEGVIMNVMKMDGFPE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
           KLV+HCLHVYGDKLDE E KSCLWRL++KRVCVHFAREVLRKGKMKLE  MDEW +KIPL
Sbjct: 241 KLVQHCLHVYGDKLDEHEGKSCLWRLNEKRVCVHFAREVLRKGKMKLEHLMDEWRQKIPL 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
           GM A FD+LEGEVLTER+GVETWVRGFRV  LPSNPAERF+ILFKERPKWEWKDLQPYIR
Sbjct: 301 GMCANFDMLEGEVLTERLGVETWVRGFRVCQLPSNPAERFTILFKERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQPNP +E VFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEAVFSAR 393

[Close]

BLAST of MC05g0242 vs. ExPASy TrEMBL
Match: A0A6J1IFE0 (sister chromatid cohesion protein DCC1 OS=Cucurbita maxima OX=3661 GN=LOC111473829 PE=3 SV=1)

HSP 1 Score: 673 bits (1737), Expect = 2.06e-242
Identity = 324/393 (82.44%), Postives = 363/393 (92.37%), Query Frame = 0


Query: 8   MEQQLPNGSGADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQ 67
           MEQQ P+G GADAVL+L+ NSS++IAYHSLFGPHDDLVLLEVDEKLLEEVLH+RVSIRGQ
Sbjct: 1   MEQQNPHGRGADAVLNLQPNSSVAIAYHSLFGPHDDLVLLEVDEKLLEEVLHERVSIRGQ 60

Query: 68  PEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAP 127
            EE+AVFCTKSKTYGIKYVGTSNSVLLIPPSGR EYYEN+LDS G DS+++V  VIK+AP
Sbjct: 61  AEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSQGNDSTKEVVPVIKLAP 120

Query: 128 GIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMK 187
           GIMELVEIAPRIDKLKLLLSE PYSLADEWES+E+DK EK++YNW+DL++K+QASDDE+K
Sbjct: 121 GIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQMYNWNDLLDKVQASDDELK 180

Query: 188 AGLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPE 247
           AGL+ LSAVEIDGYWR+VDEKYMDS+LQMLL+N +LNDWSLDAL+E  +MKVM++DGF E
Sbjct: 181 AGLRALSAVEIDGYWRLVDEKYMDSMLQMLLNNRILNDWSLDALDEGVLMKVMKMDGFSE 240

Query: 248 KLVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPL 307
            LV HCL VYGDKL+ DE  SCLWRLD+KRVCVHFAREVLRKGKMK+E FMDEW +KIP+
Sbjct: 241 TLVHHCLDVYGDKLEGDEGNSCLWRLDEKRVCVHFAREVLRKGKMKVEHFMDEWQKKIPV 300

Query: 308 GMRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIR 367
            M A FD+LEGEVLTER+GVETWVRGFRVSSLP NP ERFSILF+ERPKWEWKDLQPYIR
Sbjct: 301 EMHANFDMLEGEVLTERLGVETWVRGFRVSSLPLNPVERFSILFRERPKWEWKDLQPYIR 360

Query: 368 DLTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 400
           DLTVPGLSSEGLLLKYTRRTQPNP +EPVFSAR
Sbjct: 361 DLTVPGLSSEGLLLKYTRRTQPNPEAEPVFSAR 393

[Close]

BLAST of MC05g0242 vs. TAIR 10
Match: AT2G44580.1 (zinc ion binding )

HSP 1 Score: 451.1 bits (1159), Expect = 9.6e-127
Identity = 220/392 (56.12%), Postives = 292/392 (74.49%), Query Frame = 0


Query: 17  GADAVLHLRTNSSISIAYHSLFGPHDDLVLLEVDEKLLEEVLHQRVSIRGQPEEDAVFCT 76
           GA+AV++L++  S+ I+YH  FGPH+DL+LLE D+KL+ ++ HQRV++RG P+EDAV CT
Sbjct: 6   GAEAVINLKSGYSLPISYHPCFGPHEDLLLLEADDKLVSDIFHQRVTLRGLPDEDAVLCT 65

Query: 77  KSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKDSSRKVASVIKVAPGIMELVEIA 136
           KSKTY IK+VG SNS+ LIPPS     +    D+   D++  V SV+K+APG MELVE +
Sbjct: 66  KSKTYAIKFVGNSNSMFLIPPS----IFPG--DAQVSDTNNNV-SVLKIAPGNMELVEAS 125

Query: 137 PRIDKLKLLLSEKPYSLAD-----EWESDEVDKYEKK---LYNWDDLINKIQASDDEMKA 196
           PR+DKLK +L   P+   +     + ++D++D   KK   LY W DL+N +QASD+E++ 
Sbjct: 126 PRLDKLKQILLANPFGAGEVEAMMDVDNDDLDHSGKKDLALYTWSDLVNTVQASDEELRN 185

Query: 197 GLQELSAVEIDGYWRVVDEKYMDSILQMLLHNAVLNDWSLDALNENEVMKVMEVDGFPEK 256
           GLQ LSA+EIDG+WRV+DE Y+D IL+MLLHN VL DWS D L+E+EV+  +  D FP +
Sbjct: 186 GLQSLSAIEIDGFWRVIDENYLDVILRMLLHNCVLKDWSFDDLDEDEVVNALVADEFPSQ 245

Query: 257 LVRHCLHVYGDKLDEDECKSCLWRLDQKRVCVHFAREVLRKGKMKLESFMDEWTRKIPLG 316
           L  HCL V+G K++E +     W+L+ + VC+HFAR++LR+ KM+LESFM+EW +KIP G
Sbjct: 246 LASHCLRVFGSKVNETD----KWKLEPRLVCLHFARQILREEKMRLESFMEEWKKKIPDG 305

Query: 317 MRAVFDLLEGEVLTERIGVETWVRGFRVSSLPSNPAERFSILFKERPKWEWKDLQPYIRD 376
           M   F++LEGEVLTE+IG+ET V  F V SLPS P ERFS+LFK R KWEWKDL+PY+RD
Sbjct: 306 MEERFEMLEGEVLTEKIGIETRVYTFSVRSLPSTPEERFSVLFKHRSKWEWKDLEPYLRD 365

Query: 377 LTVPGLSSEGLLLKYTRRTQPNPNSEPVFSAR 401
           L VP LS EGLLLKYTRR QP  ++ PVFSAR
Sbjct: 366 LHVPRLSMEGLLLKYTRRAQPKADAPPVFSAR 386

The following BLAST results are available for this feature:

BLAST of MC05g0242 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q14AI0	3.0e-40	31.34	Sister chromatid cohesion protein DCC1 OS=Mus musculus OX=10090 GN=DSCC1 PE=2 SV...	[more]
Q9BVC3	3.9e-40	32.03	Sister chromatid cohesion protein DCC1 OS=Homo sapiens OX=9606 GN=DSCC1 PE=1 SV=...	[more]
Q66I84	1.5e-39	31.05	Sister chromatid cohesion protein DCC1 OS=Danio rerio OX=7955 GN=dscc1 PE=2 SV=1	[more]
Q6GL75	2.0e-36	28.57	Sister chromatid cohesion protein DCC1 OS=Xenopus tropicalis OX=8364 GN=dscc1 PE...	[more]
Q6GMB0	6.4e-35	29.71	Sister chromatid cohesion protein DCC1 OS=Xenopus laevis OX=8355 GN=dscc1 PE=2 S...	[more]

BLAST of MC05g0242 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147138.1	2.56e-291	100.00	sister chromatid cohesion protein DCC1 [Momordica charantia] >XP_022147139.1 sis...	[more]
XP_008438251.1	4.37e-251	85.50	PREDICTED: sister chromatid cohesion protein DCC1 [Cucumis melo] >KAA0049092.1 s...	[more]
XP_004133954.1	1.46e-249	85.24	sister chromatid cohesion protein DCC1 [Cucumis sativus] >KGN56663.1 hypothetica...	[more]
XP_038879383.1	4.18e-249	85.50	sister chromatid cohesion protein DCC1 [Benincasa hispida] >XP_038879394.1 siste...	[more]
KAG7028709.1	1.48e-242	82.70	Sister chromatid cohesion protein DCC1 [Cucurbita argyrosperma subsp. argyrosper...	[more]

BLAST of MC05g0242 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZB2	1.24e-291	100.00	sister chromatid cohesion protein DCC1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D3CZT5	2.12e-251	85.50	Sister chromatid cohesion protein DCC1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3AWK7	2.12e-251	85.50	sister chromatid cohesion protein DCC1 OS=Cucumis melo OX=3656 GN=LOC103483416 P...	[more]
A0A0A0L4H9	7.06e-250	85.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127250 PE=3 SV=1	[more]
A0A6J1IFE0	2.06e-242	82.44	sister chromatid cohesion protein DCC1 OS=Cucurbita maxima OX=3661 GN=LOC1114738...	[more]

BLAST of MC05g0242 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44580.1	9.6e-127	56.12	zinc ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019128	Sister chromatid cohesion protein Dcc1	PFAM	PF09724	Dcc1	coord: 45..366 e-value: 7.0E-93 score: 311.5
IPR019128	Sister chromatid cohesion protein Dcc1	PANTHER	PTHR13395	SISTER CHROMATID COHESION PROTEIN DCC1-RELATED	coord: 20..400

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0242.1	MC05g0242.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:0034088	maintenance of mitotic sister chromatid cohesion
biological_process	GO:0007064	mitotic sister chromatid cohesion
cellular_component	GO:0000785	chromatin
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0031390	Ctf18 RFC-like complex
cellular_component	GO:0005634	nucleus