MC05g0028 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0028
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein transport protein Sec61 subunit beta
Location	MC05: 246549 .. 246809 (+)
RNA-Seq Expression	MC05g0028
Synteny	MC05g0028

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTATCATCACAGAATGGCGCTAGGTGGAGCAGCTCCCCAGAGAGGAAGTGCAGCAGCTACTGCAAGCATGCGCAGGAGAAGGACGACGAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGGCTCAAGATATCCCCTAACGTCGTTCTTGTCATGAGCATTGGTTTCATAGCTTTTGTTGCTATTCTCCATGTTATGGGTAAGCTGTACTTCGTGCGAAGGGAAGCT

mRNA sequence

CTTTATCATCACAGAATGGCGCTAGGTGGAGCAGCTCCCCAGAGAGGAAGTGCAGCAGCTACTGCAAGCATGCGCAGGAGAAGGACGACGAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGGCTCAAGATATCCCCTAACGTCGTTCTTGTCATGAGCATTGGTTTCATAGCTTTTGTTGCTATTCTCCATGTTATGGGTAAGCTGTACTTCGTGCGAAGGGAAGCT

Coding sequence (CDS)

CTTTATCATCACAGAATGGCGCTAGGTGGAGCAGCTCCCCAGAGAGGAAGTGCAGCAGCTACTGCAAGCATGCGCAGGAGAAGGACGACGAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGGCTCAAGATATCCCCTAACGTCGTTCTTGTCATGAGCATTGGTTTCATAGCTTTTGTTGCTATTCTCCATGTTATGGGTAAGCTGTACTTCGTGCGAAGGGAAGCT

Protein sequence

LYHHRMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

Homology

[Close]

BLAST of MC05g0028 vs. ExPASy Swiss-Prot
Match: P38389 (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=At2g45070 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.3e-27
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 8  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 67
          +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2  VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 68 SIGFIAFVAILHVMGKLYFVR 85
          SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62 SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of MC05g0028 vs. ExPASy Swiss-Prot
Match: A8I6P9 (Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=3055 GN=SEC61B PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.5e-09
Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLVM 65
          +A GG +       A  ++RRR    SG SG   A    + FYTDD PG K+SP VV+ M
Sbjct: 12 VARGGRSSSNAPTGAAGALRRRPVRGSGGSGTTKAQQAAMNFYTDDTPGWKMSPVVVITM 71

Query: 66 SIGFIAFVAILHVMGK 80
          S+ FIAFV ILHV+GK
Sbjct: 72 SLSFIAFVTILHVVGK 87

[Close]

BLAST of MC05g0028 vs. ExPASy Swiss-Prot
Match: Q9HFC7 (Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SBH1 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-06
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 20 ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK 79
          A AS R   T S G +GG++ TML+ YTD++ GLK+ P VV+V+S+GFI  V  LH++ K
Sbjct: 26 AKASQRPTSTRSVG-AGGSSSTMLKLYTDESQGLKVDPVVVMVLSLGFIFSVVALHILAK 85

Query: 80 L 81
          +
Sbjct: 86 V 85

[Close]

BLAST of MC05g0028 vs. ExPASy Swiss-Prot
Match: P60467 (Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 3.0e-06
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 10 GAAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVL 69
          G +P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VL
Sbjct: 15 GRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVL 74

Query: 70 VMSIGFIAFVAILHVMGK 80
          VMS+ FIA V +LH+ GK
Sbjct: 75 VMSLLFIASVFMLHIWGK 92

[Close]

BLAST of MC05g0028 vs. ExPASy Swiss-Prot
Match: P60468 (Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 3.0e-06
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 10 GAAPQRGSA--AATASMRRRRTTSSG------TSGGAAGTMLQFYTDDAPGLKISPNVVL 69
          G +P +  A  AA +++R+R+  S G      T+    G M +FYT+D+PGLK+ P  VL
Sbjct: 15 GRSPSKAVAARAAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVL 74

Query: 70 VMSIGFIAFVAILHVMGK 80
          VMS+ FIA V +LH+ GK
Sbjct: 75 VMSLLFIASVFMLHIWGK 92

[Close]

BLAST of MC05g0028 vs. NCBI nr
Match: XP_038875187.1 (protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida])

HSP 1 Score: 152 bits (385), Expect = 4.87e-46
Identity = 84/87 (96.55%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 1   LYHHRMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVV 60
           L+  RMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVV
Sbjct: 14  LHTIRMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVV 73

Query: 61  LVMSIGFIAFVAILHVMGKLYFVRREA 87
           LVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 74  LVMSIGFIAFVAILHVMGKLYFVRREA 100

[Close]

BLAST of MC05g0028 vs. NCBI nr
Match: XP_022146520.1 (protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_022924769.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022924770.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022980768.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023526368.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo] >XP_038875266.1 protein transport protein Sec61 subunit beta-like isoform X2 [Benincasa hispida] >KAG6582719.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020688.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 150 bits (379), Expect = 2.33e-45
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 65
          MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 66 GFIAFVAILHVMGKLYFVRREA 87
          GFIAFVAILHVMGKLYFVRREA
Sbjct: 61 GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MC05g0028 vs. NCBI nr
Match: XP_022950482.1 (protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022974254.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_022975750.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023541021.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo] >KAG6597025.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028503.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149 bits (375), Expect = 9.50e-45
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 65
          MALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 66 GFIAFVAILHVMGKLYFVRREA 87
          GFIAFVAILHVMGKLYFVRREA
Sbjct: 61 GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MC05g0028 vs. NCBI nr
Match: XP_011650635.1 (protein transport protein Sec61 subunit beta [Cucumis sativus])

HSP 1 Score: 147 bits (370), Expect = 5.50e-44
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 65
          MALGG  PQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGGGPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 66 GFIAFVAILHVMGKLYFVRREA 87
          GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61 GFIAFVAVLHVMGKLYFVRREA 82

[Close]

BLAST of MC05g0028 vs. NCBI nr
Match: KAB1225231.1 (Protein transport protein Sec61 subunit beta [Morella rubra])

HSP 1 Score: 146 bits (368), Expect = 1.11e-43
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 65
          MALGG APQRGSAAATASMRRRRTTSSG SGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGPAPQRGSAAATASMRRRRTTSSGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 66 GFIAFVAILHVMGKLYFVRREA 87
          GFIAFVA+LHVMGKLYFVRREA
Sbjct: 61 GFIAFVAVLHVMGKLYFVRREA 82

[Close]

BLAST of MC05g0028 vs. ExPASy TrEMBL
Match: A0A6J1EFZ9 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111432170 PE=3 SV=1)

HSP 1 Score: 150 bits (379), Expect = 1.13e-45
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 65
          MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 66 GFIAFVAILHVMGKLYFVRREA 87
          GFIAFVAILHVMGKLYFVRREA
Sbjct: 61 GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MC05g0028 vs. ExPASy TrEMBL
Match: A0A6J1J088 (Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111480059 PE=3 SV=1)

HSP 1 Score: 150 bits (379), Expect = 1.13e-45
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 65
          MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 66 GFIAFVAILHVMGKLYFVRREA 87
          GFIAFVAILHVMGKLYFVRREA
Sbjct: 61 GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MC05g0028 vs. ExPASy TrEMBL
Match: A0A6J1CXG1 (Protein transport protein Sec61 subunit beta OS=Momordica charantia OX=3673 GN=LOC111015719 PE=3 SV=1)

HSP 1 Score: 150 bits (379), Expect = 1.13e-45
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 65
          MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 66 GFIAFVAILHVMGKLYFVRREA 87
          GFIAFVAILHVMGKLYFVRREA
Sbjct: 61 GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MC05g0028 vs. ExPASy TrEMBL
Match: A0A6J1IH25 (Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111472887 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 4.60e-45
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 65
          MALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 66 GFIAFVAILHVMGKLYFVRREA 87
          GFIAFVAILHVMGKLYFVRREA
Sbjct: 61 GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MC05g0028 vs. ExPASy TrEMBL
Match: A0A6J1GEY3 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111453574 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 4.60e-45
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 6  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 65
          MALGG APQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1  MALGGGAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 66 GFIAFVAILHVMGKLYFVRREA 87
          GFIAFVAILHVMGKLYFVRREA
Sbjct: 61 GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of MC05g0028 vs. TAIR 10
Match: AT2G45070.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 121.3 bits (303), Expect = 3.8e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 8  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 67
          +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2  VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 68 SIGFIAFVAILHVMGKLYFVR 85
          SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62 SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of MC05g0028 vs. TAIR 10
Match: AT2G45070.2 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 121.3 bits (303), Expect = 3.8e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 8  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 67
          +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2  VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 68 SIGFIAFVAILHVMGKLYFVR 85
          SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62 SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of MC05g0028 vs. TAIR 10
Match: AT2G45070.3 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 121.3 bits (303), Expect = 3.8e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 8  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 67
          +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2  VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 68 SIGFIAFVAILHVMGKLYFVR 85
          SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62 SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of MC05g0028 vs. TAIR 10
Match: AT2G45070.4 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 121.3 bits (303), Expect = 3.8e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 8  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 67
          +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2  VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 68 SIGFIAFVAILHVMGKLYFVR 85
          SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62 SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of MC05g0028 vs. TAIR 10
Match: AT3G60540.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-27
Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 8  LGGAAPQRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIG 67
          +GG APQRGSAAATASMRRR+    S ++GG AGTMLQFYTDDAPGLKISPNVVL+MSIG
Sbjct: 2  VGGGAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIG 61

Query: 68 FIAFVAILHVMGKLYFVR 85
          FIAFVA+LHVMGKLYFV+
Sbjct: 62 FIAFVAVLHVMGKLYFVK 79

The following BLAST results are available for this feature:

BLAST of MC05g0028 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38389	5.3e-27	81.48	Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=...	[more]
A8I6P9	6.5e-09	48.68	Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=305...	[more]
Q9HFC7	1.0e-06	49.18	Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB...	[more]
P60467	3.0e-06	43.59	Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 G...	[more]
P60468	3.0e-06	43.59	Protein transport protein Sec61 subunit beta OS=Homo sapiens OX=9606 GN=SEC61B P...	[more]

BLAST of MC05g0028 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875187.1	4.87e-46	96.55	protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]	[more]
XP_022146520.1	2.33e-45	100.00	protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_0229...	[more]
XP_022950482.1	9.50e-45	98.78	protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_02297...	[more]
XP_011650635.1	5.50e-44	96.34	protein transport protein Sec61 subunit beta [Cucumis sativus]	[more]
KAB1225231.1	1.11e-43	96.34	Protein transport protein Sec61 subunit beta [Morella rubra]	[more]

BLAST of MC05g0028 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFZ9	1.13e-45	100.00	Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J088	1.13e-45	100.00	Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1CXG1	1.13e-45	100.00	Protein transport protein Sec61 subunit beta OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1IH25	4.60e-45	98.78	Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GEY3	4.60e-45	98.78	Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MC05g0028 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45070.1	3.8e-28	81.48	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.2	3.8e-28	81.48	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.3	3.8e-28	81.48	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.4	3.8e-28	81.48	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT3G60540.1	1.1e-27	82.05	Preprotein translocase Sec, Sec61-beta subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR030671	Protein transport Sec61-beta/Sbh	PIRSF	PIRSF006398	Sec61_beta	coord: 5..85 e-value: 1.3E-26 score: 90.9
IPR030671	Protein transport Sec61-beta/Sbh	PANTHER	PTHR13509	SEC61 SUBUNIT BETA	coord: 6..87
IPR016482	Protein transport protein SecG/Sec61-beta/Sbh	PFAM	PF03911	Sec61_beta	coord: 39..78 e-value: 2.5E-18 score: 65.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	PANTHER	PTHR13509:SF2	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA	coord: 6..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0028.1	MC05g0028.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005784	Sec61 translocon complex