MC04g_new0427 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g_new0427
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC04: 16714629 .. 16715766 (-)
RNA-Seq Expression	MC04g_new0427
Synteny	MC04g_new0427

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTGCTAGATTACAACCCTGCAGTTCGTCCCATCGAATCTTCAAGGCTTAACTCTGAACTTGGTATGCCGAACTTGCCTTCCCCCTTTTTCCTCTAACCTTGTGTTGACCCTTGTTTTTATCTTGTAGCCATGGTTTACGGATTTGCAAGCGGCGTGAAGCGCAAGTCTAAGGGCCGAGCCCATGCTCTTGAGGCTGCCCAGAGTTCGAAACCTCCCACCCCTGCCGTGGTAGGGCCTGCCTCGGAAGATCCAGCCCCGGTGATCGAGCTGGAGTCTTCTGGGGGTCCCTCGAGGGAGAAGCGCCCCAGGGATCAGACCGAGGCGGTGGACGCCCAGACCGAGGCGGCGGACGCCCCGCCTTTGGGCGAGGAGGCGAGGGAGGAAGCCCCTCTGAAGCGAAGAAGGAAGAAAAAGAAGGCGATCTCCCCCTCGGAGGTCGGAGCTTGCAGGGTCTTGCCTGCAGGTTTCGCTGATCGGGTGGACGATCCTGCGGCCAGGATGGGCGGGACGTCCGACGTGACGGCGCGGTTCAGAATTGAGCCGTCAAGTTTAGGGGTGGGGGACCAGGTGACCCGCATCTCAGCTGCGAGTTTGGACCGCTGCCTAAGGAGGGCGTCCAAATTTGTGAGCGCCCCTGGGTCCGTTCTGCAGAGGACCATCGACTACGCCGCCGAGGTAAGACTAGTGCCCCATTTTTGCTTGATTTCGCCCAACAGGTAGTTCGATCTAACTTTTTCCTTGTACCATTTCTCAGGTGTTCGTTGCTTCCATTCAATCGGCTCTGGTTGTAAAGGCCGAGATGGATGGGAGGGAAGCTTTGCCAGCGAGGGAGAAAGAGGAGTTCTCCGCTGCCTTGGAGGCTGCTTCCTCCACCATGAAGGATGAGCTGCTGAAGGCTCACTTCGAGGTGGAGACTTTGAAGGCCGAGGTGGAGTCTCAGGCCGAGCTGCTGAAGAAGGAGGAGGACAGGCGCAAGGCTCAACTCCGAGCTGCCCACGCTATCACCAGGGGCTTGGAGAGGGAGAAGTTCCAGCTCCTGAAGGAGAAGGACGACATGCTCCAGGCGCTTGAAGCGAAGGATAAGGAGTTGGAGCATGCGACTGCCGAGCTGGAGACGGCGAAGGAGCGCCTCAGCA

mRNA sequence

ATGGTTTACGGATTTGCAAGCGGCGTGAAGCGCAAGTCTAAGGGCCGAGCCCATGCTCTTGAGGCTGCCCAGAGTTCGAAACCTCCCACCCCTGCCGTGGTAGGGCCTGCCTCGGAAGATCCAGCCCCGGTGATCGAGCTGGAGTCTTCTGGGGGTCCCTCGAGGGAGAAGCGCCCCAGGGATCAGACCGAGGCGGTGGACGCCCAGACCGAGGCGGCGGACGCCCCGCCTTTGGGCGAGGAGGCGAGGGAGGAAGCCCCTCTGAAGCGAAGAAGGAAGAAAAAGAAGGCGATCTCCCCCTCGGAGGTCGGAGCTTGCAGGGTCTTGCCTGCAGGTTTCGCTGATCGGGTGGACGATCCTGCGGCCAGGATGGGCGGGACGTCCGACGTGACGGCGCGGTTCAGAATTGAGCCGTCAAGTTTAGGGGTGGGGGACCAGGTGACCCGCATCTCAGCTGCGAGTTTGGACCGCTGCCTAAGGAGGGCGTCCAAATTTGTGAGCGCCCCTGGGTCCGTTCTGCAGAGGACCATCGACTACGCCGCCGAGGTAAGACTAGTGCCCCATTTTTGCTTGATTTCGCCCAACAGGTAG

Coding sequence (CDS)

ATGGTTTACGGATTTGCAAGCGGCGTGAAGCGCAAGTCTAAGGGCCGAGCCCATGCTCTTGAGGCTGCCCAGAGTTCGAAACCTCCCACCCCTGCCGTGGTAGGGCCTGCCTCGGAAGATCCAGCCCCGGTGATCGAGCTGGAGTCTTCTGGGGGTCCCTCGAGGGAGAAGCGCCCCAGGGATCAGACCGAGGCGGTGGACGCCCAGACCGAGGCGGCGGACGCCCCGCCTTTGGGCGAGGAGGCGAGGGAGGAAGCCCCTCTGAAGCGAAGAAGGAAGAAAAAGAAGGCGATCTCCCCCTCGGAGGTCGGAGCTTGCAGGGTCTTGCCTGCAGGTTTCGCTGATCGGGTGGACGATCCTGCGGCCAGGATGGGCGGGACGTCCGACGTGACGGCGCGGTTCAGAATTGAGCCGTCAAGTTTAGGGGTGGGGGACCAGGTGACCCGCATCTCAGCTGCGAGTTTGGACCGCTGCCTAAGGAGGGCGTCCAAATTTGTGAGCGCCCCTGGGTCCGTTCTGCAGAGGACCATCGACTACGCCGCCGAGGTAAGACTAGTGCCCCATTTTTGCTTGATTTCGCCCAACAGGTAG

Protein sequence

MVYGFASGVKRKSKGRAHALEAAQSSKPPTPAVVGPASEDPAPVIELESSGGPSREKRPRDQTEAVDAQTEAADAPPLGEEAREEAPLKRRRKKKKAISPSEVGACRVLPAGFADRVDDPAARMGGTSDVTARFRIEPSSLGVGDQVTRISAASLDRCLRRASKFVSAPGSVLQRTIDYAAEVRLVPHFCLISPNR

Homology

[Close]

BLAST of MC04g_new0427 vs. NCBI nr
Match: XP_022159164.1 (uncharacterized protein LOC111025590 [Momordica charantia])

HSP 1 Score: 301 bits (772), Expect = 7.30e-102
Identity = 166/191 (86.91%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MVYGFASGVKRKSKGRAHALEAAQSSKPPTPAVVGPASEDPAPVIELESSGGPSREKRPR 60
           MV GFAS VKRKSKGRAHALEAAQSSKP TPAV GPASEDPAPVIELESSGGPSREKRPR
Sbjct: 1   MVCGFASSVKRKSKGRAHALEAAQSSKPTTPAVAGPASEDPAPVIELESSGGPSREKRPR 60

Query: 61  DQTEAVDAQTEAADAPPLGEEAREEAPLKRRRKKKKAISPSEVGACRVLPAGFADRVDDP 120
           DQTEAVDA        PLGEE REEAPLKRRRKKKK ISP EVGACRVLPA FADRVDDP
Sbjct: 61  DQTEAVDAL-------PLGEEVREEAPLKRRRKKKKTISPLEVGACRVLPASFADRVDDP 120

Query: 121 AARMGGTSDVTARFRIEPSSLGVGDQVTRISAASLDRCLRRASKFVSAPGSVLQRTIDYA 180
           AARMGGTSDV+ARFR+EPSS GV DQV+RISAASLDRCLRRASKFVS PGSVLQRTIDYA
Sbjct: 121 AARMGGTSDVSARFRVEPSSSGVRDQVSRISAASLDRCLRRASKFVSDPGSVLQRTIDYA 180

Query: 181 AEVRLVPHFCL 191
           AEVRLV  F L
Sbjct: 181 AEVRLVSPFLL 184

[Close]

BLAST of MC04g_new0427 vs. NCBI nr
Match: XP_022159185.1 (uncharacterized protein LOC111025606 [Momordica charantia])

HSP 1 Score: 285 bits (730), Expect = 1.11e-94
Identity = 156/182 (85.71%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 1   MVYGFASGVKRKSKGRAHALEAAQSSKPPTPAVVGPASEDPAPVIELESSGGPSREKRPR 60
           MV GFAS VKRKSKGRAHA EAAQSSKP TPAV GPASEDPAPVIELESSGGPSREKRPR
Sbjct: 1   MVCGFASSVKRKSKGRAHAXEAAQSSKPATPAVAGPASEDPAPVIELESSGGPSREKRPR 60

Query: 61  DQTEAVDAQTEAADAPPLGEEAREEAPLKRRRKKKKAISPSEVGACRVLPAGFADRVDDP 120
           DQTEAVDA        PLGEE REE PLKRRRKKKK ISP EVGAC VLPA FADRVDDP
Sbjct: 61  DQTEAVDAL-------PLGEEVREEVPLKRRRKKKKTISPLEVGACGVLPASFADRVDDP 120

Query: 121 AARMGGTSDVTARFRIEPSSLGVGDQVTRISAASLDRCLRRASKFVSAPGSVLQRTIDYA 180
            ARMGGTSDVTARFR++PSS GV DQV+RISAASLDRCLRRASKFVS PGSVLQRTIDYA
Sbjct: 121 EARMGGTSDVTARFRVQPSSAGVRDQVSRISAASLDRCLRRASKFVSDPGSVLQRTIDYA 175

Query: 181 AE 182
           AE
Sbjct: 181 AE 175

[Close]

BLAST of MC04g_new0427 vs. NCBI nr
Match: XP_022138041.1 (uncharacterized protein LOC111009298 [Momordica charantia])

HSP 1 Score: 210 bits (535), Expect = 6.03e-65
Identity = 118/146 (80.82%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 1   MVYGFASGVKRKSKGRAHALEAAQSSKPPTPAVVGPASEDPAPVIELESSGGPSREKRPR 60
           MV GFAS VKRKSKG+AHALEAAQSSKP TPAVVGPASEDPAPVIELESS GPSREKRPR
Sbjct: 102 MVCGFASNVKRKSKGQAHALEAAQSSKPVTPAVVGPASEDPAPVIELESSRGPSREKRPR 161

Query: 61  DQTEAVDAQTEAADAPPLGEEAREEAPLKRRRKKKKAISPSEVGACRVLPAGFADRVDDP 120
           DQTEAVD         PLGEE REE PLKRRRKKKK  SP EVGA  VLPA FADRVDDP
Sbjct: 162 DQTEAVDVS-------PLGEEVREEVPLKRRRKKKKTTSPLEVGARGVLPASFADRVDDP 221

Query: 121 AARMGGTSDVTARFRIEPSSLGVGDQ 146
            ARMGGT DVT RFR+EPSS GV DQ
Sbjct: 222 EARMGGTPDVTTRFRVEPSSSGVRDQ 240

[Close]

BLAST of MC04g_new0427 vs. NCBI nr
Match: XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])

HSP 1 Score: 181 bits (459), Expect = 1.62e-50
Identity = 113/190 (59.47%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 1   MVYGFASGVKRKSKGRAHALEAAQSSKPPTPAVV--------GPASEDPAPVIELESSGG 60
           MV GF   VKRKSKGRAHAL+    ++P TP V         GP+S  P PVIEL+ SGG
Sbjct: 116 MVCGFTGSVKRKSKGRAHALKTVVGTEPVTPTVPRTXAQGNSGPSSAVPTPVIELDLSGG 175

Query: 61  PSREKRPRDQTEAVDAQTEAADAPPLGEEAREEAPLKRRRKKKKAISPSEVGACRVLPAG 120
            S EKR R+++EA+D         PL E  R E+PL+RRRKKKK  S SE GA   LP  
Sbjct: 176 RSGEKRSREESEALDVS-------PLNE-VRGESPLRRRRKKKKTSSSSEAGARGTLPTS 235

Query: 121 FADRVDDPAARMGGTSDVTARFRIEPSSLGVGDQVTRISAASLDRCLRRASKFVSAPGSV 180
            AD VDDP ARM GTS+V  RF +EPSS GV DQV+RISA  LDR LRRASKFVS PGSV
Sbjct: 236 HADLVDDPEARMRGTSNVRMRFGMEPSSSGVKDQVSRISATCLDRYLRRASKFVSDPGSV 295

Query: 181 LQRTIDYAAE 182
           LQRTID  AE
Sbjct: 296 LQRTIDNVAE 297

[Close]

BLAST of MC04g_new0427 vs. NCBI nr
Match: XP_022142326.1 (uncharacterized protein LOC111012467 [Momordica charantia])

HSP 1 Score: 164 bits (415), Expect = 6.22e-44
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 90  RRRKKKKAISPSEVGACRVLPAGFADRVDDPAARMGGTSDVTARFRIEPSSLGVGDQVTR 149
           +RRKKKKAIS SEVGACRVLPAGFADRVDDPAARMGGTSDVTARFRIEPSS GV DQV+R
Sbjct: 30  KRRKKKKAISSSEVGACRVLPAGFADRVDDPAARMGGTSDVTARFRIEPSSSGVRDQVSR 89

Query: 150 ISAASLDRCLRRASKFVSAPGSVLQRTIDYAAE 182
           ISAASLDRCLRRASKFVS PGSVL R IDYAAE
Sbjct: 90  ISAASLDRCLRRASKFVSXPGSVLXRXIDYAAE 122

[Close]

BLAST of MC04g_new0427 vs. ExPASy TrEMBL
Match: A0A6J1E1K8 (uncharacterized protein LOC111025590 OS=Momordica charantia OX=3673 GN=LOC111025590 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 3.53e-102
Identity = 166/191 (86.91%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MVYGFASGVKRKSKGRAHALEAAQSSKPPTPAVVGPASEDPAPVIELESSGGPSREKRPR 60
           MV GFAS VKRKSKGRAHALEAAQSSKP TPAV GPASEDPAPVIELESSGGPSREKRPR
Sbjct: 1   MVCGFASSVKRKSKGRAHALEAAQSSKPTTPAVAGPASEDPAPVIELESSGGPSREKRPR 60

Query: 61  DQTEAVDAQTEAADAPPLGEEAREEAPLKRRRKKKKAISPSEVGACRVLPAGFADRVDDP 120
           DQTEAVDA        PLGEE REEAPLKRRRKKKK ISP EVGACRVLPA FADRVDDP
Sbjct: 61  DQTEAVDAL-------PLGEEVREEAPLKRRRKKKKTISPLEVGACRVLPASFADRVDDP 120

Query: 121 AARMGGTSDVTARFRIEPSSLGVGDQVTRISAASLDRCLRRASKFVSAPGSVLQRTIDYA 180
           AARMGGTSDV+ARFR+EPSS GV DQV+RISAASLDRCLRRASKFVS PGSVLQRTIDYA
Sbjct: 121 AARMGGTSDVSARFRVEPSSSGVRDQVSRISAASLDRCLRRASKFVSDPGSVLQRTIDYA 180

Query: 181 AEVRLVPHFCL 191
           AEVRLV  F L
Sbjct: 181 AEVRLVSPFLL 184

[Close]

BLAST of MC04g_new0427 vs. ExPASy TrEMBL
Match: A0A6J1DXZ1 (uncharacterized protein LOC111025606 OS=Momordica charantia OX=3673 GN=LOC111025606 PE=4 SV=1)

HSP 1 Score: 285 bits (730), Expect = 5.38e-95
Identity = 156/182 (85.71%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 1   MVYGFASGVKRKSKGRAHALEAAQSSKPPTPAVVGPASEDPAPVIELESSGGPSREKRPR 60
           MV GFAS VKRKSKGRAHA EAAQSSKP TPAV GPASEDPAPVIELESSGGPSREKRPR
Sbjct: 1   MVCGFASSVKRKSKGRAHAXEAAQSSKPATPAVAGPASEDPAPVIELESSGGPSREKRPR 60

Query: 61  DQTEAVDAQTEAADAPPLGEEAREEAPLKRRRKKKKAISPSEVGACRVLPAGFADRVDDP 120
           DQTEAVDA        PLGEE REE PLKRRRKKKK ISP EVGAC VLPA FADRVDDP
Sbjct: 61  DQTEAVDAL-------PLGEEVREEVPLKRRRKKKKTISPLEVGACGVLPASFADRVDDP 120

Query: 121 AARMGGTSDVTARFRIEPSSLGVGDQVTRISAASLDRCLRRASKFVSAPGSVLQRTIDYA 180
            ARMGGTSDVTARFR++PSS GV DQV+RISAASLDRCLRRASKFVS PGSVLQRTIDYA
Sbjct: 121 EARMGGTSDVTARFRVQPSSAGVRDQVSRISAASLDRCLRRASKFVSDPGSVLQRTIDYA 175

Query: 181 AE 182
           AE
Sbjct: 181 AE 175

[Close]

BLAST of MC04g_new0427 vs. ExPASy TrEMBL
Match: A0A6J1C8K9 (uncharacterized protein LOC111009298 OS=Momordica charantia OX=3673 GN=LOC111009298 PE=4 SV=1)

HSP 1 Score: 210 bits (535), Expect = 2.92e-65
Identity = 118/146 (80.82%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 1   MVYGFASGVKRKSKGRAHALEAAQSSKPPTPAVVGPASEDPAPVIELESSGGPSREKRPR 60
           MV GFAS VKRKSKG+AHALEAAQSSKP TPAVVGPASEDPAPVIELESS GPSREKRPR
Sbjct: 102 MVCGFASNVKRKSKGQAHALEAAQSSKPVTPAVVGPASEDPAPVIELESSRGPSREKRPR 161

Query: 61  DQTEAVDAQTEAADAPPLGEEAREEAPLKRRRKKKKAISPSEVGACRVLPAGFADRVDDP 120
           DQTEAVD         PLGEE REE PLKRRRKKKK  SP EVGA  VLPA FADRVDDP
Sbjct: 162 DQTEAVDVS-------PLGEEVREEVPLKRRRKKKKTTSPLEVGARGVLPASFADRVDDP 221

Query: 121 AARMGGTSDVTARFRIEPSSLGVGDQ 146
            ARMGGT DVT RFR+EPSS GV DQ
Sbjct: 222 EARMGGTPDVTTRFRVEPSSSGVRDQ 240

[Close]

BLAST of MC04g_new0427 vs. ExPASy TrEMBL
Match: A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)

HSP 1 Score: 181 bits (459), Expect = 7.82e-51
Identity = 113/190 (59.47%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 1   MVYGFASGVKRKSKGRAHALEAAQSSKPPTPAVV--------GPASEDPAPVIELESSGG 60
           MV GF   VKRKSKGRAHAL+    ++P TP V         GP+S  P PVIEL+ SGG
Sbjct: 116 MVCGFTGSVKRKSKGRAHALKTVVGTEPVTPTVPRTXAQGNSGPSSAVPTPVIELDLSGG 175

Query: 61  PSREKRPRDQTEAVDAQTEAADAPPLGEEAREEAPLKRRRKKKKAISPSEVGACRVLPAG 120
            S EKR R+++EA+D         PL E  R E+PL+RRRKKKK  S SE GA   LP  
Sbjct: 176 RSGEKRSREESEALDVS-------PLNE-VRGESPLRRRRKKKKTSSSSEAGARGTLPTS 235

Query: 121 FADRVDDPAARMGGTSDVTARFRIEPSSLGVGDQVTRISAASLDRCLRRASKFVSAPGSV 180
            AD VDDP ARM GTS+V  RF +EPSS GV DQV+RISA  LDR LRRASKFVS PGSV
Sbjct: 236 HADLVDDPEARMRGTSNVRMRFGMEPSSSGVKDQVSRISATCLDRYLRRASKFVSDPGSV 295

Query: 181 LQRTIDYAAE 182
           LQRTID  AE
Sbjct: 296 LQRTIDNVAE 297

[Close]

BLAST of MC04g_new0427 vs. ExPASy TrEMBL
Match: A0A6J1CLV1 (uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012467 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 3.01e-44
Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 90  RRRKKKKAISPSEVGACRVLPAGFADRVDDPAARMGGTSDVTARFRIEPSSLGVGDQVTR 149
           +RRKKKKAIS SEVGACRVLPAGFADRVDDPAARMGGTSDVTARFRIEPSS GV DQV+R
Sbjct: 30  KRRKKKKAISSSEVGACRVLPAGFADRVDDPAARMGGTSDVTARFRIEPSSSGVRDQVSR 89

Query: 150 ISAASLDRCLRRASKFVSAPGSVLQRTIDYAAE 182
           ISAASLDRCLRRASKFVS PGSVL R IDYAAE
Sbjct: 90  ISAASLDRCLRRASKFVSXPGSVLXRXIDYAAE 122

The following BLAST results are available for this feature:

BLAST of MC04g_new0427 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g_new0427 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159164.1	7.30e-102	86.91	uncharacterized protein LOC111025590 [Momordica charantia]	[more]
XP_022159185.1	1.11e-94	85.71	uncharacterized protein LOC111025606 [Momordica charantia]	[more]
XP_022138041.1	6.03e-65	80.82	uncharacterized protein LOC111009298 [Momordica charantia]	[more]
XP_022159252.1	1.62e-50	59.47	uncharacterized protein LOC111025665 [Momordica charantia]	[more]
XP_022142326.1	6.22e-44	91.40	uncharacterized protein LOC111012467 [Momordica charantia]	[more]

BLAST of MC04g_new0427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1K8	3.53e-102	86.91	uncharacterized protein LOC111025590 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DXZ1	5.38e-95	85.71	uncharacterized protein LOC111025606 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1C8K9	2.92e-65	80.82	uncharacterized protein LOC111009298 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1DZB3	7.82e-51	59.47	uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CLV1	3.01e-44	91.40	uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of MC04g_new0427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g_new0427.1	MC04g_new0427.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0046872	metal ion binding