MC04g_new0202 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g_new0202
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC04: 6483427 .. 6485347 (+)
RNA-Seq Expression	MC04g_new0202
Synteny	MC04g_new0202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGTAGTCCCGCTAATCTCGCGACGGTTACATTCGGTAATCTCGGGACCGTCGGTTACACCCGGTAATCTCGGGACCGACGGTTACGCCCGATAATCACGCCGCAGACAGTTGCTCACATCGACCCCTATCGAGCTCCCCGGTAGGTCAGACCTGGGCTAGGTTCACCTCGGCCCTCATACTTAGCATTTGTCGGCGTCAGTGGCGGCCATCTCGGCTATCCGAGCTGGGCATGACTCATGAGCCATCTTGGAGCACCAATAGGGGTCCTCCACGTGTCCAGGGTATTCCCTTCCCCAAACATTGGCCCCCTCTCTGTCTGGTCCGATCTCGACCTGGCAGAGAAGTTCATTCGACTTGCTTTGGACACGTGGCGACTTCCTATTCGTGGGAAAATACAACCGTCGCGGAAGATTTATCGTCGGAATATTCAAATATTCCGACGCTACGGATCTCAGAGAGGATCCTAGCCGCTCGTTGATTACACGTGTACGGTGGGGAAATTCTTCCGACGGGCTATAAATGCCCCCAATCCTTCAGATCATACCTTACGTTCCCTGAATTCTTGGAGTTCGATCTGAAGGCAGCTCGAACCCTTGGTAGGTCGGTCTCTTCCCTCTCTCTTTCGAACGTAATTGCCATGTCGTCCTCTATTAGCAGCAACCTAGGATCCGATTTAGCTCGTAGGTTAGAGTCCGAGCTCGAGGAGATAGAAAACTTTAGAATCTCCGATGACGGGGAGGATAGTGACGCCTCCACTTCAGGTCAGGGTTTGGAATACCCTTCTAGGATACCTGAGCACTACCTCGGATCCCTTCGTAGGGGGTTCGCTATCCCTGAGAACATCCTCCTCAGGCTTCCGGAGGAGGGGGAGAGAGCTGACAATCCTCCAGAGGGATGGGTCACTCTCTACTTCAAAATGTTTGAGTACGGCCTCAGACTTCCCCTTCACCCTTTTGTCCAAGAATTTCTCTTCCGGACTGGATTGGCTCCGGCTCAAGTGGCCCCCAATGGGTGGGGTGTCATTTTCGCTTTGGCCATCCTCTTCTGGCTACGAGCTCGGGATAGTGAGGAGGCCGAGCTGTTGGACGTAGACCAGCTCCTCGCGTGCTTCGAAGCGAAAAGGATAGCTAAGAAGCCTGGTCGGTTCTATATGTGCGCAAGGAAAGGCGCAGGCGGTATAGTTAAGGGGCCGACCTCCATCAAGGGATGGGTGAGGAAGTGGTTCTACGCTTCCGGGGAATGGCTCGCAAAAGACGAGTCAGGTCGTTCCTTCTTTGACGTCCCCACTAGGTTTGGGAACCTAGGTACGGAGTAGTTCTTGCTTTTCGTAATTTTCTTCTGTCATTCAGGTCTAACTCGGATTTTGTCTTCGTGCAGTTTCAATCCGACCAGTCCCCGAGCTTACGCAAGCCTCCTTCGACACGTTGAAATACTACAAGGAGCGCTTTCCGAGGGGTAGGAAGGTCGGAACCCTGGTGACCGACGAGCTGCTGCTTGAGTCCGAGCTGCTAGATTACAACCCTGCAGTTCCTCCCATTGAATCCTCAAGGCCGAACTCTGAACTTGTTATGCCGAGCTTGCCTTCCCCTTTTTCCTCTAACCTTGTATTGACCCCTGTTTTTATTTCGCAACCATGGTTTGCGGGTTTGCAAGCAGCGTGAAGCGCAAGTCCAAGGGCCGAGCCCATGTTCTTGAGGCCGCCCAGAGTTCGAAACCTGCCACCCTGCCGTGGCAGGGCCTGCCTCGGAAGATCCAGCCCCAGTGATCGAGCTGGAGTCTTCTGGGGGTCCCTCGAGGGAGAAGCGCCCCAGGGATCAGACCGAGGCGGTGGACGCCCAGCCTTTGGGCGAGGAGGTGAGGGAGGAAGCCCCTCTGAAGCAGAGAAGGAAGAAAAAGAAGGCGATCTCCCCCTAG

mRNA sequence

ATGGGTGGTAGTCCCGCTAATCTCGCGACGGTTACATTCGGTAATCTCGGGACCGTCGGTTACACCCGATCATACCTTACGTTCCCTGAATTCTTGGAGTTCGATCTGAAGGCAGCTCGAACCCTTGGTAGGTCGGTCTCTTCCCTCTCTCTTTCGAACGTAATTGCCATGTCGTCCTCTATTAGCAGCAACCTAGGATCCGATTTAGCTCGTAGGTTAGAGTCCGAGCTCGAGGAGATAGAAAACTTTAGAATCTCCGATGACGGGGAGGATAGTGACGCCTCCACTTCAGTTTCAATCCGACCAGTCCCCGAGCTTACGCAAGCCTCCTTCGACACGTTGAAATACTACAAGGAGCGCTTTCCGAGGGGTAGGAAGGTCGGAACCCTGGTGACCGACGAGCTGCTGCTTGAGTCCGAGCTGCTAGATTACAACCCTGCAGTTCCTCCCATTGAATCCTCAAGGCCGAACTCTGAACTTGTTATGCCGAGCTTGCCTTCCCCTTTTTCCTCTAACCTTGTATTGACCCCTGTTTTTATTTCGCAACCATGGTTTGCGGGGCCTGCCTCGGAAGATCCAGCCCCAGTGATCGAGCTGGAGTCTTCTGGGGGTCCCTCGAGGGAGAAGCGCCCCAGGGATCAGACCGAGGCGGTGGACGCCCAGCCTTTGGGCGAGGAGGTGAGGGAGGAAGCCCCTCTGAAGCAGAGAAGGAAGAAAAAGAAGGCGATCTCCCCCTAG

Coding sequence (CDS)

ATGGGTGGTAGTCCCGCTAATCTCGCGACGGTTACATTCGGTAATCTCGGGACCGTCGGTTACACCCGATCATACCTTACGTTCCCTGAATTCTTGGAGTTCGATCTGAAGGCAGCTCGAACCCTTGGTAGGTCGGTCTCTTCCCTCTCTCTTTCGAACGTAATTGCCATGTCGTCCTCTATTAGCAGCAACCTAGGATCCGATTTAGCTCGTAGGTTAGAGTCCGAGCTCGAGGAGATAGAAAACTTTAGAATCTCCGATGACGGGGAGGATAGTGACGCCTCCACTTCAGTTTCAATCCGACCAGTCCCCGAGCTTACGCAAGCCTCCTTCGACACGTTGAAATACTACAAGGAGCGCTTTCCGAGGGGTAGGAAGGTCGGAACCCTGGTGACCGACGAGCTGCTGCTTGAGTCCGAGCTGCTAGATTACAACCCTGCAGTTCCTCCCATTGAATCCTCAAGGCCGAACTCTGAACTTGTTATGCCGAGCTTGCCTTCCCCTTTTTCCTCTAACCTTGTATTGACCCCTGTTTTTATTTCGCAACCATGGTTTGCGGGGCCTGCCTCGGAAGATCCAGCCCCAGTGATCGAGCTGGAGTCTTCTGGGGGTCCCTCGAGGGAGAAGCGCCCCAGGGATCAGACCGAGGCGGTGGACGCCCAGCCTTTGGGCGAGGAGGTGAGGGAGGAAGCCCCTCTGAAGCAGAGAAGGAAGAAAAAGAAGGCGATCTCCCCCTAG

Protein sequence

MGGSPANLATVTFGNLGTVGYTRSYLTFPEFLEFDLKAARTLGRSVSSLSLSNVIAMSSSISSNLGSDLARRLESELEEIENFRISDDGEDSDASTSVSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRPNSELVMPSLPSPFSSNLVLTPVFISQPWFAGPASEDPAPVIELESSGGPSREKRPRDQTEAVDAQPLGEEVREEAPLKQRRKKKKAISP

Homology

[Close]

BLAST of MC04g_new0202 vs. NCBI nr
Match: XP_022138041.1 (uncharacterized protein LOC111009298 [Momordica charantia])

HSP 1 Score: 203 bits (517), Expect = 1.88e-61
Identity = 118/161 (73.29%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 97  SVSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRP 156
           SV+IRPVPELTQASFDTLKYYKE FPRGRKVGTLVTD+LLLES LLDYNPAV PIESSRP
Sbjct: 37  SVAIRPVPELTQASFDTLKYYKEHFPRGRKVGTLVTDKLLLESGLLDYNPAVRPIESSRP 96

Query: 157 NSELVMPSLPSPFSSNL---------VLTPVFISQPW---FAGPASEDPAPVIELESSGG 216
           NSEL M      F+SN+          L     S+P      GPASEDPAPVIELESS G
Sbjct: 97  NSELAMVC---GFASNVKRKSKGQAHALEAAQSSKPVTPAVVGPASEDPAPVIELESSRG 156

Query: 217 PSREKRPRDQTEAVDAQPLGEEVREEAPLKQRRKKKKAISP 245
           PSREKRPRDQTEAVD  PLGEEVREE PLK+RRKKKK  SP
Sbjct: 157 PSREKRPRDQTEAVDVSPLGEEVREEVPLKRRRKKKKTTSP 194

[Close]

BLAST of MC04g_new0202 vs. NCBI nr
Match: XP_022144034.1 (uncharacterized protein LOC111013826 [Momordica charantia])

HSP 1 Score: 172 bits (437), Expect = 5.45e-49
Identity = 104/147 (70.75%), Postives = 107/147 (72.79%), Query Frame = 0


Query: 98  VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRPN 157
           VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLES LLDYNPAV PIE SRPN
Sbjct: 130 VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGLLDYNPAVRPIEXSRPN 189

Query: 158 SELVMPSLPSPFSSNL---------VLTPVFISQP---WFAGPASEDPAPVIELESSGGP 217
           S L M      F+S +          L     S+P      GPASEDPAPVIELESSGGP
Sbjct: 190 SXLAMVCR---FASGVKRKSKGRAHALEAAQSSKPPTPAVVGPASEDPAPVIELESSGGP 249

Query: 218 SREKRPRDQTEAVDAQ-------PLGE 225
           SREKRPRDQTEAVDAQ       PLGE
Sbjct: 250 SREKRPRDQTEAVDAQTEAADVPPLGE 273

[Close]

BLAST of MC04g_new0202 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 168 bits (426), Expect = 1.52e-46
Identity = 99/134 (73.88%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 98  VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRPN 157
           VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLES LLDYNPAV PIESSRPN
Sbjct: 223 VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGLLDYNPAVRPIESSRPN 282

Query: 158 SELVMPSLPSPFSSNL---------VLTPVFISQPW---FAGPASEDPAPVIELESSGGP 217
           SEL M      F+S +          L     S+P      GPASEDPA VIELESSGGP
Sbjct: 283 SELAMVC---GFASGVKRKSKGRAHALEAAQSSKPATPAVVGPASEDPALVIELESSGGP 342

Query: 218 SREKRPRDQTEAVD 219
           SREKRPRDQTEAVD
Sbjct: 343 SREKRPRDQTEAVD 353

[Close]

BLAST of MC04g_new0202 vs. NCBI nr
Match: XP_022156270.1 (uncharacterized protein LOC111023202 [Momordica charantia])

HSP 1 Score: 135 bits (339), Expect = 2.89e-36
Identity = 68/72 (94.44%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 98  VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRPN 157
           VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLES LLDYNPAV PIESSRPN
Sbjct: 52  VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGLLDYNPAVXPIESSRPN 111

Query: 158 SELVMPSLPSPF 169
           SEL MPSLP PF
Sbjct: 112 SELGMPSLPPPF 123

[Close]

BLAST of MC04g_new0202 vs. NCBI nr
Match: XP_022139697.1 (uncharacterized protein LOC111010544 [Momordica charantia])

HSP 1 Score: 139 bits (349), Expect = 3.83e-36
Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 97  SVSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRP 156
           ++SI+P+PEL QA+FDTLKYYK+ FP+GRK+GTLVTD+LL ES LLDYNP V PIE+SRP
Sbjct: 30  ALSIKPIPELAQATFDTLKYYKDHFPKGRKIGTLVTDKLLWESGLLDYNPLVRPIEASRP 89

Query: 157 NSELVMP-------SLPSPFSSNLVLT-----PVFISQPWF-----AGPASEDPAPVIEL 216
           NSEL M           S   ++ + T     PV  + P       +GP+S  P PVIEL
Sbjct: 90  NSELAMVCGFTGSVKRKSKGRAHALKTVVGTEPVMPTVPRTEAHGNSGPSSTAPTPVIEL 149

Query: 217 ESSGGPSREKRPRDQTEAVDAQPLGEEVREEAPLKQRR 237
           + SG  S EKRPR+++EA+D  PL E VR E PL++RR
Sbjct: 150 DLSGDRSGEKRPREESEALDVSPLNE-VRGEFPLRRRR 186

[Close]

BLAST of MC04g_new0202 vs. ExPASy TrEMBL
Match: A0A6J1C8K9 (uncharacterized protein LOC111009298 OS=Momordica charantia OX=3673 GN=LOC111009298 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 9.11e-62
Identity = 118/161 (73.29%), Postives = 124/161 (77.02%), Query Frame = 0


Query: 97  SVSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRP 156
           SV+IRPVPELTQASFDTLKYYKE FPRGRKVGTLVTD+LLLES LLDYNPAV PIESSRP
Sbjct: 37  SVAIRPVPELTQASFDTLKYYKEHFPRGRKVGTLVTDKLLLESGLLDYNPAVRPIESSRP 96

Query: 157 NSELVMPSLPSPFSSNL---------VLTPVFISQPW---FAGPASEDPAPVIELESSGG 216
           NSEL M      F+SN+          L     S+P      GPASEDPAPVIELESS G
Sbjct: 97  NSELAMVC---GFASNVKRKSKGQAHALEAAQSSKPVTPAVVGPASEDPAPVIELESSRG 156

Query: 217 PSREKRPRDQTEAVDAQPLGEEVREEAPLKQRRKKKKAISP 245
           PSREKRPRDQTEAVD  PLGEEVREE PLK+RRKKKK  SP
Sbjct: 157 PSREKRPRDQTEAVDVSPLGEEVREEVPLKRRRKKKKTTSP 194

[Close]

BLAST of MC04g_new0202 vs. ExPASy TrEMBL
Match: A0A6J1CR42 (uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013826 PE=4 SV=1)

HSP 1 Score: 172 bits (437), Expect = 2.64e-49
Identity = 104/147 (70.75%), Postives = 107/147 (72.79%), Query Frame = 0


Query: 98  VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRPN 157
           VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLES LLDYNPAV PIE SRPN
Sbjct: 130 VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGLLDYNPAVRPIEXSRPN 189

Query: 158 SELVMPSLPSPFSSNL---------VLTPVFISQP---WFAGPASEDPAPVIELESSGGP 217
           S L M      F+S +          L     S+P      GPASEDPAPVIELESSGGP
Sbjct: 190 SXLAMVCR---FASGVKRKSKGRAHALEAAQSSKPPTPAVVGPASEDPAPVIELESSGGP 249

Query: 218 SREKRPRDQTEAVDAQ-------PLGE 225
           SREKRPRDQTEAVDAQ       PLGE
Sbjct: 250 SREKRPRDQTEAVDAQTEAADVPPLGE 273

[Close]

BLAST of MC04g_new0202 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 168 bits (426), Expect = 7.34e-47
Identity = 99/134 (73.88%), Postives = 102/134 (76.12%), Query Frame = 0


Query: 98  VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRPN 157
           VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLES LLDYNPAV PIESSRPN
Sbjct: 223 VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGLLDYNPAVRPIESSRPN 282

Query: 158 SELVMPSLPSPFSSNL---------VLTPVFISQPW---FAGPASEDPAPVIELESSGGP 217
           SEL M      F+S +          L     S+P      GPASEDPA VIELESSGGP
Sbjct: 283 SELAMVC---GFASGVKRKSKGRAHALEAAQSSKPATPAVVGPASEDPALVIELESSGGP 342

Query: 218 SREKRPRDQTEAVD 219
           SREKRPRDQTEAVD
Sbjct: 343 SREKRPRDQTEAVD 353

[Close]

BLAST of MC04g_new0202 vs. ExPASy TrEMBL
Match: A0A6J1DPT7 (uncharacterized protein LOC111023202 OS=Momordica charantia OX=3673 GN=LOC111023202 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 1.40e-36
Identity = 68/72 (94.44%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 98  VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRPN 157
           VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLES LLDYNPAV PIESSRPN
Sbjct: 52  VSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESGLLDYNPAVXPIESSRPN 111

Query: 158 SELVMPSLPSPF 169
           SEL MPSLP PF
Sbjct: 112 SELGMPSLPPPF 123

[Close]

BLAST of MC04g_new0202 vs. ExPASy TrEMBL
Match: A0A6J1CEP5 (uncharacterized protein LOC111010544 OS=Momordica charantia OX=3673 GN=LOC111010544 PE=4 SV=1)

HSP 1 Score: 139 bits (349), Expect = 1.85e-36
Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 97  SVSIRPVPELTQASFDTLKYYKERFPRGRKVGTLVTDELLLESELLDYNPAVPPIESSRP 156
           ++SI+P+PEL QA+FDTLKYYK+ FP+GRK+GTLVTD+LL ES LLDYNP V PIE+SRP
Sbjct: 30  ALSIKPIPELAQATFDTLKYYKDHFPKGRKIGTLVTDKLLWESGLLDYNPLVRPIEASRP 89

Query: 157 NSELVMP-------SLPSPFSSNLVLT-----PVFISQPWF-----AGPASEDPAPVIEL 216
           NSEL M           S   ++ + T     PV  + P       +GP+S  P PVIEL
Sbjct: 90  NSELAMVCGFTGSVKRKSKGRAHALKTVVGTEPVMPTVPRTEAHGNSGPSSTAPTPVIEL 149

Query: 217 ESSGGPSREKRPRDQTEAVDAQPLGEEVREEAPLKQRR 237
           + SG  S EKRPR+++EA+D  PL E VR E PL++RR
Sbjct: 150 DLSGDRSGEKRPREESEALDVSPLNE-VRGEFPLRRRR 186

The following BLAST results are available for this feature:

BLAST of MC04g_new0202 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g_new0202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138041.1	1.88e-61	73.29	uncharacterized protein LOC111009298 [Momordica charantia]	[more]
XP_022144034.1	5.45e-49	70.75	uncharacterized protein LOC111013826 [Momordica charantia]	[more]
XP_022159063.1	1.52e-46	73.88	uncharacterized protein LOC111025502, partial [Momordica charantia]	[more]
XP_022156270.1	2.89e-36	94.44	uncharacterized protein LOC111023202 [Momordica charantia]	[more]
XP_022139697.1	3.83e-36	53.16	uncharacterized protein LOC111010544 [Momordica charantia]	[more]

BLAST of MC04g_new0202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8K9	9.11e-62	73.29	uncharacterized protein LOC111009298 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1CR42	2.64e-49	70.75	uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DXS5	7.34e-47	73.88	uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DPT7	1.40e-36	94.44	uncharacterized protein LOC111023202 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CEP5	1.85e-36	53.16	uncharacterized protein LOC111010544 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of MC04g_new0202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g_new0202.1	MC04g_new0202.1	mRNA