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MC04g_new0196 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATATCAATCAAGGTTAAAGCTGGCTCCTCCTCCTCCTCTCAGTTACAATTTGAAGCTCCTTCTGATCTTGAATCGTCAATATCGGTAGTGAAAGAGATCAGGATGGAACTCCAAGTCCAAGCCGAATGTCATCACTTCCAAGTGGTCTCCACTACTCCAACTTTGGTTAGCCATCACCATTCCCCTACATTCTTCACAGCAGCTTACCAACTTCCTGTGCACATCTTCAACCGTGGCATTTGCGACAACACTCTGCAGCGTTTCCTATCATGGTAGTTCAAAGAATATGAAGATTGCATTAACATACCAGCCATGACATACCAAATAATAAACCACTGGCTCCATGTCAAACGAGAAGCAGCTGCAGCAGCTACCACTCGTGATCGTAACAACAATTCCAATTCCATTGCGTTTGGGAGAGTTTTTCCTCTTGAAGTTACCTTGCATTTGTGGAATTCGGTCATTGAAGATGATGATGATGATTATGCTATGGTTCCAGCAAGCGAAGTTGGTATTGAGAAGATGTTAAAGACCGTAAAGTTTGAGGAGATTGTACTGGAATCAGCAACTACTTGTGTGATTTGTTTGGAGGAAATCACCACGATGCCCAACCAAGATATCGACAGTGGAATGTTATTGGTGCAGATGCCTTGCTTGCATGTGTTTCATAAAAAATGCATCCTCAAGTGGCTTAACAATAGTCATTATTGTCCCACTTGTAGATTTCAAATGCCTACAAATTTAACAAATGCTCAACATTCTACATAG ATGGAAATATCAATCAAGGTTAAAGCTGGCTCCTCCTCCTCCTCTCAGTTACAATTTGAAGCTCCTTCTGATCTTGAATCGTCAATATCGGTAGTGAAAGAGATCAGGATGGAACTCCAAGTCCAAGCCGAATGTCATCACTTCCAAGTGGTCTCCACTACTCCAACTTTGTTCAAAGAATATGAAGATTGCATTAACATACCAGCCATGACATACCAAATAATAAACCACTGGCTCCATGTCAAACGAGAAGCAGCTGCAGCAGCTACCACTCGTGATCGTAACAACAATTCCAATTCCATTGCGTTTGGGAGAGTTTTTCCTCTTGAAGTTACCTTGCATTTGTGGAATTCGGTCATTGAAGATGATGATGATGATTATGCTATGGTTCCAGCAAGCGAAGTTGGTATTGAGAAGATGTTAAAGACCGTAAAGTTTGAGGAGATTGTACTGGAATCAGCAACTACTTGTGTGATTTGTTTGGAGGAAATCACCACGATGCCCAACCAAGATATCGACAGTGGAATGTTATTGGTGCAGATGCCTTGCTTGCATGTGTTTCATAAAAAATGCATCCTCAAGTGGCTTAACAATAGTCATTATTGTCCCACTTGTAGATTTCAAATGCCTACAAATTTAACAAATGCTCAACATTCTACATAG ATGGAAATATCAATCAAGGTTAAAGCTGGCTCCTCCTCCTCCTCTCAGTTACAATTTGAAGCTCCTTCTGATCTTGAATCGTCAATATCGGTAGTGAAAGAGATCAGGATGGAACTCCAAGTCCAAGCCGAATGTCATCACTTCCAAGTGGTCTCCACTACTCCAACTTTGTTCAAAGAATATGAAGATTGCATTAACATACCAGCCATGACATACCAAATAATAAACCACTGGCTCCATGTCAAACGAGAAGCAGCTGCAGCAGCTACCACTCGTGATCGTAACAACAATTCCAATTCCATTGCGTTTGGGAGAGTTTTTCCTCTTGAAGTTACCTTGCATTTGTGGAATTCGGTCATTGAAGATGATGATGATGATTATGCTATGGTTCCAGCAAGCGAAGTTGGTATTGAGAAGATGTTAAAGACCGTAAAGTTTGAGGAGATTGTACTGGAATCAGCAACTACTTGTGTGATTTGTTTGGAGGAAATCACCACGATGCCCAACCAAGATATCGACAGTGGAATGTTATTGGTGCAGATGCCTTGCTTGCATGTGTTTCATAAAAAATGCATCCTCAAGTGGCTTAACAATAGTCATTATTGTCCCACTTGTAGATTTCAAATGCCTACAAATTTAACAAATGCTCAACATTCTACATAG MEISIKVKAGSSSSSQLQFEAPSDLESSISVVKEIRMELQVQAECHHFQVVSTTPTLFKEYEDCINIPAMTYQIINHWLHVKREAAAAATTRDRNNNSNSIAFGRVFPLEVTLHLWNSVIEDDDDDYAMVPASEVGIEKMLKTVKFEEIVLESATTCVICLEEITTMPNQDIDSGMLLVQMPCLHVFHKKCILKWLNNSHYCPTCRFQMPTNLTNAQHST Homology
BLAST of MC04g_new0196 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10 Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of MC04g_new0196 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09 Identity = 37/100 (37.00%), Postives = 49/100 (49.00%), Query Frame = 0
BLAST of MC04g_new0196 vs. ExPASy Swiss-Prot
Match: Q8GXF8 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Arabidopsis thaliana OX=3702 GN=SGR9 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 7.4e-09 Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 0
BLAST of MC04g_new0196 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08 Identity = 34/99 (34.34%), Postives = 50/99 (50.51%), Query Frame = 0
BLAST of MC04g_new0196 vs. ExPASy Swiss-Prot
Match: Q9P0P0 (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07 Identity = 34/110 (30.91%), Postives = 57/110 (51.82%), Query Frame = 0
BLAST of MC04g_new0196 vs. NCBI nr
Match: XP_022158633.1 (E3 ubiquitin-protein ligase RING1-like [Momordica charantia]) HSP 1 Score: 310 bits (793), Expect = 3.41e-105 Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of MC04g_new0196 vs. NCBI nr
Match: XP_022158635.1 (RING-H2 finger protein ATL47-like [Momordica charantia]) HSP 1 Score: 275 bits (703), Expect = 6.39e-91 Identity = 137/159 (86.16%), Postives = 144/159 (90.57%), Query Frame = 0
BLAST of MC04g_new0196 vs. NCBI nr
Match: XP_022158634.1 (E3 ubiquitin-protein ligase RING1-like [Momordica charantia]) HSP 1 Score: 270 bits (689), Expect = 1.80e-89 Identity = 129/143 (90.21%), Postives = 134/143 (93.71%), Query Frame = 0
BLAST of MC04g_new0196 vs. NCBI nr
Match: XP_022131659.1 (uncharacterized protein LOC111004784 [Momordica charantia]) HSP 1 Score: 122 bits (307), Expect = 3.03e-30 Identity = 80/220 (36.36%), Postives = 117/220 (53.18%), Query Frame = 0
BLAST of MC04g_new0196 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putative zinc finger protein [Cucumis melo var. makuwa] >TYK06863.1 putative zinc finger protein [Cucumis melo var. makuwa]) HSP 1 Score: 121 bits (304), Expect = 1.06e-29 Identity = 86/236 (36.44%), Postives = 120/236 (50.85%), Query Frame = 0
BLAST of MC04g_new0196 vs. ExPASy TrEMBL
Match: A0A6J1DWN3 (E3 ubiquitin-protein ligase RING1-like OS=Momordica charantia OX=3673 GN=LOC111025082 PE=4 SV=1) HSP 1 Score: 310 bits (793), Expect = 1.65e-105 Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of MC04g_new0196 vs. ExPASy TrEMBL
Match: A0A6J1DWD8 (RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111025085 PE=4 SV=1) HSP 1 Score: 275 bits (703), Expect = 3.09e-91 Identity = 137/159 (86.16%), Postives = 144/159 (90.57%), Query Frame = 0
BLAST of MC04g_new0196 vs. ExPASy TrEMBL
Match: A0A6J1DZZ7 (E3 ubiquitin-protein ligase RING1-like OS=Momordica charantia OX=3673 GN=LOC111025083 PE=4 SV=1) HSP 1 Score: 270 bits (689), Expect = 8.71e-90 Identity = 129/143 (90.21%), Postives = 134/143 (93.71%), Query Frame = 0
BLAST of MC04g_new0196 vs. ExPASy TrEMBL
Match: A0A6J1BQW1 (uncharacterized protein LOC111004784 OS=Momordica charantia OX=3673 GN=LOC111004784 PE=4 SV=1) HSP 1 Score: 122 bits (307), Expect = 1.47e-30 Identity = 80/220 (36.36%), Postives = 117/220 (53.18%), Query Frame = 0
BLAST of MC04g_new0196 vs. ExPASy TrEMBL
Match: A0A5D3C4K6 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001670 PE=4 SV=1) HSP 1 Score: 121 bits (304), Expect = 5.15e-30 Identity = 86/236 (36.44%), Postives = 120/236 (50.85%), Query Frame = 0
BLAST of MC04g_new0196 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein ) HSP 1 Score: 68.6 bits (166), Expect = 7.4e-12 Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of MC04g_new0196 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein ) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10 Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 0
BLAST of MC04g_new0196 vs. TAIR 10
Match: AT4G26400.1 (RING/U-box superfamily protein ) HSP 1 Score: 64.3 bits (155), Expect = 1.4e-10 Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 0
BLAST of MC04g_new0196 vs. TAIR 10
Match: AT3G15740.1 (RING/U-box superfamily protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-10 Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 0
BLAST of MC04g_new0196 vs. TAIR 10
Match: AT3G13228.1 (RING/U-box superfamily protein ) HSP 1 Score: 62.8 bits (151), Expect = 4.0e-10 Identity = 44/155 (28.39%), Postives = 78/155 (50.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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