MC04g_new0153 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g_new0153
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 4571533 .. 4571904 (+)
RNA-Seq ExpressionMC04g_new0153
SyntenyMC04g_new0153
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCCAGATGGATTTGAGGGCTTAAACACTGAATTTCAAGGCTGGGAAAAACTTGGGTTGCTCTGTTTTTTGCTTTTCTTGAAATTTCAGATGGACCCAGATGAATTTGAGTGCTTAAACACTGAATTTCAAGGCTGGGAAAAACTTGGGTTGCTCTGTTTTTTGCTTTTCTTGAAATTTCAGATGGACCCAGATGGATTTGAGGGCTTAAACACTGAATTTCAAGGCTGGGAAAAACTTGGGTTGCTCTGTTTTTTGCTTTTCTTGAAATTTCAGATGGACCCAGATGAATTTGAGTGCTTAAACACTGAAATTGGAGGCTGGGGAAACTTGGGTTTCTCTGTTTTTGTTGAAACAGGTGAATATTGA

mRNA sequence

ATGGACCCAGATGGATTTGAGGGCTTAAACACTGAATTTCAAGGCTGGGAAAAACTTGGGTTGCTCTGTTTTTTGCTTTTCTTGAAATTTCAGATGGACCCAGATGAATTTGAGTGCTTAAACACTGAATTTCAAGGCTGGGAAAAACTTGGGTTGCTCTGTTTTTTGCTTTTCTTGAAATTTCAGATGGACCCAGATGGATTTGAGGGCTTAAACACTGAATTTCAAGGCTGGGAAAAACTTGGGTTGCTCTGTTTTTTGCTTTTCTTGAAATTTCAGATGGACCCAGATGAATTTGAGTGCTTAAACACTGAAATTGGAGGCTGGGGAAACTTGGGTTTCTCTGTTTTTGTTGAAACAGGTGAATATTGA

Coding sequence (CDS)

ATGGACCCAGATGGATTTGAGGGCTTAAACACTGAATTTCAAGGCTGGGAAAAACTTGGGTTGCTCTGTTTTTTGCTTTTCTTGAAATTTCAGATGGACCCAGATGAATTTGAGTGCTTAAACACTGAATTTCAAGGCTGGGAAAAACTTGGGTTGCTCTGTTTTTTGCTTTTCTTGAAATTTCAGATGGACCCAGATGGATTTGAGGGCTTAAACACTGAATTTCAAGGCTGGGAAAAACTTGGGTTGCTCTGTTTTTTGCTTTTCTTGAAATTTCAGATGGACCCAGATGAATTTGAGTGCTTAAACACTGAAATTGGAGGCTGGGGAAACTTGGGTTTCTCTGTTTTTGTTGAAACAGGTGAATATTGA

Protein sequence

MDPDGFEGLNTEFQGWEKLGLLCFLLFLKFQMDPDEFECLNTEFQGWEKLGLLCFLLFLKFQMDPDGFEGLNTEFQGWEKLGLLCFLLFLKFQMDPDEFECLNTEIGGWGNLGFSVFVETGEY
Homology
[Close]
BLAST of MC04g_new0153 vs. NCBI nr
Match: CAD7445157.1 (unnamed protein product [Timema bartmani])

HSP 1 Score: 51.2 bits (121), Expect = 1.95e-04
Identity = 38/109 (34.86%), Postives = 58/109 (53.21%), Query Frame = 0 

Query: 1   MDPDGFEGLNTEFQGWEKLGLLCFLLFLKFQMDPDEFECLNTEFQGWEKLGLLCFLL-FL 60
           ++  GFE L  E+QG+E     CFLL      +   FECL  E+QG+E     CFL+ + 
Sbjct: 344 LEYHGFECLLVEYQGFE-----CFLL------EYQVFECLLLEYQGFE-----CFLVEYQ 403

Query: 61  KFQ---MDPDGFEGLNTEFQGWEKLGLLCFLLFLKFQMDPDEFECLNTE 105
           +F    ++  GFE +  E+Q ++ L LL + +F    ++   FECL  E
Sbjct: 404 EFDCLILEYQGFECILVEYQEFDCL-LLEYQMFECLLLEYQVFECLLLE 435

[Close]
BLAST of MC04g_new0153 vs. ExPASy TrEMBL
Match: A0A7R9F1Z7 (Hypothetical protein OS=Timema bartmani OX=61472 GN=TBIB3V08_LOCUS7515 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.45e-05
Identity = 38/109 (34.86%), Postives = 58/109 (53.21%), Query Frame = 0 

Query: 1   MDPDGFEGLNTEFQGWEKLGLLCFLLFLKFQMDPDEFECLNTEFQGWEKLGLLCFLL-FL 60
           ++  GFE L  E+QG+E     CFLL      +   FECL  E+QG+E     CFL+ + 
Sbjct: 344 LEYHGFECLLVEYQGFE-----CFLL------EYQVFECLLLEYQGFE-----CFLVEYQ 403

Query: 61  KFQ---MDPDGFEGLNTEFQGWEKLGLLCFLLFLKFQMDPDEFECLNTE 105
           +F    ++  GFE +  E+Q ++ L LL + +F    ++   FECL  E
Sbjct: 404 EFDCLILEYQGFECILVEYQEFDCL-LLEYQMFECLLLEYQVFECLLLE 435

The following BLAST results are available for this feature:
BLAST of MC04g_new0153 vs.
Match NameE-valueIdentityDescription
BLAST of MC04g_new0153 vs. NCBI nr
Match NameE-valueIdentityDescription
CAD7445157.11.95e-0434.86unnamed protein product [Timema bartmani][more]
BLAST of MC04g_new0153 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7R9F1Z79.45e-0534.86Hypothetical protein OS=Timema bartmani OX=61472 GN=TBIB3V08_LOCUS7515 PE=4 SV=1[more]
BLAST of MC04g_new0153 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g_new0153.1MC04g_new0153.1mRNA