MC04g_new0011 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g_new0011
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 695274 .. 695486 (+)
RNA-Seq ExpressionMC04g_new0011
SyntenyMC04g_new0011
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTTCTTCTGTTGTCCTCCGCCGTGTCGGAATCCCGGGTTCTCGGAGTGGAAAGGCCGATGCTCGTGGCACTCCAGCAGCTGCAAGAGAAGCTGCTGCTTCGGGGGAACAGCGGTGCAGCGTCGGCGGTGAAGGCTGTGGCGGCCGGAAAATCTTATGCGGCGTCGAAGCGGTCTAGCCCCGGTGGACCTGACCCGAGACACCATTGA

mRNA sequence

ATGTTGGTTCTTCTGTTGTCCTCCGCCGTGTCGGAATCCCGGGTTCTCGGAGTGGAAAGGCCGATGCTCGTGGCACTCCAGCAGCTGCAAGAGAAGCTGCTGCTTCGGGGGAACAGCGGTGCAGCGTCGGCGGTGAAGGCTGTGGCGGCCGGAAAATCTTATGCGGCGTCGAAGCGGTCTAGCCCCGGTGGACCTGACCCGAGACACCATTGA

Coding sequence (CDS)

ATGTTGGTTCTTCTGTTGTCCTCCGCCGTGTCGGAATCCCGGGTTCTCGGAGTGGAAAGGCCGATGCTCGTGGCACTCCAGCAGCTGCAAGAGAAGCTGCTGCTTCGGGGGAACAGCGGTGCAGCGTCGGCGGTGAAGGCTGTGGCGGCCGGAAAATCTTATGCGGCGTCGAAGCGGTCTAGCCCCGGTGGACCTGACCCGAGACACCATTGA

Protein sequence

MLVLLLSSAVSESRVLGVERPMLVALQQLQEKLLLRGNSGAASAVKAVAAGKSYAASKRSSPGGPDPRHH
Homology
[Close]
BLAST of MC04g_new0011 vs. NCBI nr
Match: XP_039807528.1 (uncharacterized protein LOC120671295 [Panicum virgatum] >KAG2604307.1 hypothetical protein PVAP13_4NG037008 [Panicum virgatum])

HSP 1 Score: 48.1 bits (113), Expect = 5.08e-05
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 0 

Query: 3  VLLLSSAVSESRV-LGVERPMLVALQQLQ-EKLLLRGNSGAASAV-----------KAVA 62
          VLLLS+AVS  R   G  RP  V +  +   K+L+ GN  AA+A            +A A
Sbjct: 16 VLLLSTAVSHGRCEAGDSRPAAVVVVVVTGRKMLVAGNGSAAAATTRADVGVPRLTRAAA 75

Query: 63 AGKSYAASKRSSPGGPDPRHH 70
          A  +Y+ SKRSSPGGPDP+HH
Sbjct: 76 AAAAYSESKRSSPGGPDPQHH 96

The following BLAST results are available for this feature:
BLAST of MC04g_new0011 vs.
Match NameE-valueIdentityDescription
BLAST of MC04g_new0011 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_039807528.15.08e-0545.68uncharacterized protein LOC120671295 [Panicum virgatum] >KAG2604307.1 hypothetic... [more]
BLAST of MC04g_new0011 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MC04g_new0011 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g_new0011.1MC04g_new0011.1mRNA