MC04g1994 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g1994
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA-binding protein 48
LocationMC04: 26688332 .. 26692398 (-)
RNA-Seq ExpressionMC04g1994
SyntenyMC04g1994
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTAGCTTTTGTGACAATGGTGAATTTTAACTTGATTTTTTTTTTCTAAACAAATTTTCTACTTTTAAAATTGTAAATACTTCAAAACTTGGAATTTGTGGAAGACGACTTGTAGCTGTAGGGGATGCCGCGCTACACAGACGAGCACCCTGCGGTTCGCGTCTATACGATTTGCGACGAGTCAAGGTCTGCTCCGCCTCTGTTATTTCTCCTCTGCAGAATAGAAGATCTATGGAGCTCATCTTTACTTGTTCTTTGTGAAATCCAACAGGTTTCTGATTGTGAGGAATGTTCCGGCATTGGGTTGCGGCGATGACTTGCTCAAATTGTTTTCCTCATACGGAAACGTCGAAGAGTACTTCTCTTTTGCCTTTTGTTCTGTCTTTCAGACTCGTCTTTACATGCTTCTTCTTTAGCGTGCTGTGCTTCCTTTTCTTTTTATCTTATTTTATACTCTTTCAGGTGTAAACCAATGGATGCAGAAGAATGTGATGAATTTACGGATGTTTATTTTGTCAAATTTCACTTGGTCGCCAATGCCAGGTAATTTGGTTCTCTTTTGATCAAAAGCATGCGCTATAGAGCCCCCCGACCCCCGAGGACAAAAGTTTCTTAATCATGTATGCCCTTTATTCAACTGTAAGAAATTGAACTATAATGATTTATTTTTTAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTTGATACAAAAGAGAAGCTTGAAGTCAGGAGACGAGAAGTTTTAGCACGATTGGATTGTAAGTTTTTGTGTTTGAGAAATGTAGCTTCAGCATTTTGTATGCATATAATAGGAAGATGTTGTTTTGAGTATATGTGCAAGGCATTCATTTAAAAATCCAAGACATGAACATTATAATAGGGAAATCGTGTTTCCTTCTAATTAGTTCACTTTTAAGCATGTTATAACTCTGATATCAGCTGGAAGATCAAAGGGATCTGCAGTAAGATCAACTACCACAAAGCTTACAAATCCTGCACATTCTCATTATACCCTTGAACAGAAGAACTCTCTTGAAAAGAGGTATAAGCAAATGAAAATTTGCAGTTTCTTCAAACTCGACAATCTTGTTTTGATTGTCCTTCTCTGGTAGGAATTATGGAGATGCAGCACTCATTGCCAACCCACATGTTTCTCAAATGACAAAAGTATCCTCCGATCAGGTTTGTTTATTATAGTTGTTTTCCTTCCTTCACCTTTTGTTATAGTTGTTATTAACAATTCTAGGAGAAATTATTCATGTGTTCTTTTAGTTCATGTTTTCTCTTGTACTTGATGAAATTTGAACTTAGTTTCAATACTTGTGTTTCAAGTGTGAACACAAAATTATGAAGAGTGTTTCTCCTTTATTTTTTATTGGGCCCAAAAATTCTCAGGCATTTGAGAAGTATAGACTCTCCCAACCATATCCATTATCCAGATTTTTCCTTGGGGCTTTTGCTATAATACCGAAGTGAGCCTAAATAATTGCAAATTTGTAGTATGATAAAATATTTTGCAAAAATGGTTCAAATGTAAGAACTTGTACATTAATGGTATATGTCTATTAATGATGTACTTCATATTAGATATATAAGTTATATGAGAGAAAATTATCATATTTGCAATTTTTTTTTAATGTGAGAAATTTGTAAATATAGAAACTAGTTTTACCACCTATTATAATTTTCCTTTTTCTTTCTTTCACCGTTCAATCCTTGCCCTTTTACTGCTTAATTCAAATTAGTTAGATTCCTAGCTATAATTATTTGCTATCAACTTAGTTGTGCCAGTGGGGTAACAATATTAACTATCGACTTTATGACCTGCCTTGTCTGGCATGAGTATAGGTATAAAGGGTTGACTATCACCATTAGGTGTAGCTTTTTGCATTTTCATCTCTCCATTTTGGCATTTAAGAATTCAACTAATATGTTGATAGACACAATATAATTGCCACCAATTCTTCCATAACAGTGTCTTCAATTTTTGGTGCTTCAAGATTCTCATCAGTGCATAGTTCTATGAGTTGGGATAATCTTGACTTTAAATATCTCTTTTGTATTTTGGGTCAGATTTGTGTGACCAAAATATTTAAAGCAAATAGCATCATTCTTCTCTTGCTAAGAATCATTGAGCCACTTACATCAATATCTAAATCAATTTTCATACTCGAGGTCTAGATTCTTCCTCAAATTCATTGTTGGAGATATTTCCATCAATTTCGATTACCTCTTCAAAACTACTCTAAAATCATTTTCAATTTCTTGAATTCAATCACATCTGAATATACGGATTGGAAATGAGATTTTGGTGATCTCTGACAAGGAGGGGTGGAGATAAAGGTCCAACAACACCTTTGAGAAATGAGCATGATGCATTGGAGACTTTTCATTGAATTTGGATTTGAATATTTGAAGGTAGTGGGGTTAGCTCACAGATTTTTATATCCGTGTATATGAAGGAATAGCTTCTTGATGGATCAACAGTGAAGATGACGTGATTTTGTAACAGAATTGGTATTAGGCCGGTGGGTGGAAATTGGGGCAGGGGCCTAGATTTTGTCTCGATGAAGCAATAGTTTTTGGTGGGTTAATTGTGGAATGTTGTCGTGAAAGCGAGCATAGCTCAGCGGTAATTAACATAGATCTCCAACCAAGAGATTCTTCGATCCTCCTCTCCCACAGTTAGAAGTGAAGGTGTATAATGTTTGAGGATGTGGTTTTGCATCCGAATCTAGATTGGTCTTGATGATGTGGTGAAGAATTTGAAGATGTAGGTGATGGAAAAAGTAGTTTAATAGGCTGCGGTGTTGGATCTAACAAAGCAAGCAATTGCTGCTGTGCTCACTCCACCTCCAATATGTCAGCTCCATCCGTCATTTATGGCTAAAAGGGTGACTTTTTTTTGTTGAGTGTACAGGATCACTTCGCATCTGAATCTATGAATCGAACTGTGCATCTCGTCAGGGAAAAGCTGGACAAGGTGATATAATTTGTTTGTTATGGTTTATTTTGTAGATGATGAGCAATTGTAATGTAAACATTGGTTATTATTTTCTTGTGTTTTAGATTCAATCAAGCAGTGAACATCTTGAAGGTGGACCCATGAGCAAGAAGTCACGTGTAGACAACAGAAGAAGAATCTAGTGCTTCCCGGACCGGCCTTTTCTGTTATGTTGTGAGAATGATAATTAAAAATATAAAAGTGGTGGGCCGACTGAATTGTAAGTGTTTGGTAGAGGTTAAAAATTCAGGGTCAAAACTATCACTCTTATTAATTTTTCTGGGGCTTGTCCCAACATCTAAATCAAATTATTGGCGCCCACCAAAAGCCTATATTTCCTTAGCTGTCAAGTTGAAGTTATTTTGCACAAGTAATATTGTAGAATATTTTGCATGTATTTTATGTACAGCCCATTGTCCTCCACTTGAGAATCAACACCCCGTTCTCTTCATCTTGATCGGAAAATAATCAATAGAAAAAGAAAGGATCGGAATTGATCAGGCCAATGGAATTGATTGTGTGCGCAATCCTTTCACCATAGAGTTTGAATCAATAGTGAGTTGTTTACGGCACGAAAATAATTGCTCCAGCTTCAGCCACTCGAATTTTGTAGGTTCGAGTCCTACTAAGCCTACCACCCCTTATCTTCTTCACCTGATACAAGGCCGTCTAAGTCCCGGTCCAATCGGGTGTCAAAAGATCCTCATTTTAACCACTGTAAAAGAAATTATTTTGAAAAGATTGCCTTTTTTTCGACTTGCCTTGTGTGGGGTGGCTCCTCCATTGTGGGTAAACGGGAAACCCGACGAGAGTTGCTCCTTCTCGTTAAGGATCATCAAATGAGAGATCTTCCTCTGATTCCGAGAAATCGGGCAAGACTTCTCAATCGAGTATTTAGGAAGCAGTTGAATCGAATAAGTCAACTTCAAAGTGGATTTGGATCAATCATAGATTCTCGGTCCCGTCGTTTGGCTTCCACTCCAGTTGACCTTCGATACTCTGCATTCG

mRNA sequence

GGTAGCTTTTGTGACAATGGTGAATTTTAACTTGATTTTTTTTTTCTAAACAAATTTTCTACTTTTAAAATTGTAAATACTTCAAAACTTGGAATTTGTGGAAGACGACTTGTAGCTGTAGGGGATGCCGCGCTACACAGACGAGCACCCTGCGGTTCGCGTCTATACGATTTGCGACGAGTCAAGGTTTCTGATTGTGAGGAATGTTCCGGCATTGGGTTGCGGCGATGACTTGCTCAAATTGTTTTCCTCATACGGAAACGTCGAAGAGTGTAAACCAATGGATGCAGAAGAATGTGATGAATTTACGGATGTTTATTTTGTCAAATTTCACTTGGTCGCCAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTTGATACAAAAGAGAAGCTTGAAGTCAGGAGACGAGAAGTTTTAGCACGATTGGATTCTGGAAGATCAAAGGGATCTGCAGTAAGATCAACTACCACAAAGCTTACAAATCCTGCACATTCTCATTATACCCTTGAACAGAAGAACTCTCTTGAAAAGAGGAATTATGGAGATGCAGCACTCATTGCCAACCCACATGTTTCTCAAATGACAAAAGTATCCTCCGATCAGGATCACTTCGCATCTGAATCTATGAATCGAACTGTGCATCTCGTCAGGGAAAAGCTGGACAAGATTCAATCAAGCAGTGAACATCTTGAAGGTGGACCCATGAGCAAGAAGTCACGTGTAGACAACAGAAGAAGAATCTAGTGCTTCCCGGACCGGCCTTTTCTGTTATGTTGTGAGAATGATAATTAAAAATATAAAAGTGGTGGGCCGACTGAATTGTAAGTGTTTGGTAGAGGTTAAAAATTCAGGGTCAAAACTATCACTCTTATTAATTTTTCTGGGGCTTGTCCCAACATCTAAATCAAATTATTGGCGCCCACCAAAAGCCTATATTTCCTTAGCTGTCAAGTTGAAGTTATTTTGCACAAGTAATATTGTAGAATATTTTGCATGTATTTTATGTACAGCCCATTGTCCTCCACTTGAGAATCAACACCCCGTTCTCTTCATCTTGATCGGAAAATAATCAATAGAAAAAGAAAGGATCGGAATTGATCAGGCCAATGGAATTGATTGTGTGCGCAATCCTTTCACCATAGAGTTTGAATCAATAGTGAGTTGTTTACGGCACGAAAATAATTGCTCCAGCTTCAGCCACTCGAATTTTGTAGGTTCGAGTCCTACTAAGCCTACCACCCCTTATCTTCTTCACCTGATACAAGGCCGTCTAAGTCCCGGTCCAATCGGGTGTCAAAAGATCCTCATTTTAACCACTGTAAAAGAAATTATTTTGAAAAGATTGCCTTTTTTTCGACTTGCCTTGTGTGGGGTGGCTCCTCCATTGTGGGTAAACGGGAAACCCGACGAGAGTTGCTCCTTCTCGTTAAGGATCATCAAATGAGAGATCTTCCTCTGATTCCGAGAAATCGGGCAAGACTTCTCAATCGAGTATTTAGGAAGCAGTTGAATCGAATAAGTCAACTTCAAAGTGGATTTGGATCAATCATAGATTCTCGGTCCCGTCGTTTGGCTTCCACTCCAGTTGACCTTCGATACTCTGCATTCG

Coding sequence (CDS)

ATGCCGCGCTACACAGACGAGCACCCTGCGGTTCGCGTCTATACGATTTGCGACGAGTCAAGGTTTCTGATTGTGAGGAATGTTCCGGCATTGGGTTGCGGCGATGACTTGCTCAAATTGTTTTCCTCATACGGAAACGTCGAAGAGTGTAAACCAATGGATGCAGAAGAATGTGATGAATTTACGGATGTTTATTTTGTCAAATTTCACTTGGTCGCCAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTTGGTAATCGGCTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTTGATACAAAAGAGAAGCTTGAAGTCAGGAGACGAGAAGTTTTAGCACGATTGGATTCTGGAAGATCAAAGGGATCTGCAGTAAGATCAACTACCACAAAGCTTACAAATCCTGCACATTCTCATTATACCCTTGAACAGAAGAACTCTCTTGAAAAGAGGAATTATGGAGATGCAGCACTCATTGCCAACCCACATGTTTCTCAAATGACAAAAGTATCCTCCGATCAGGATCACTTCGCATCTGAATCTATGAATCGAACTGTGCATCTCGTCAGGGAAAAGCTGGACAAGATTCAATCAAGCAGTGAACATCTTGAAGGTGGACCCATGAGCAAGAAGTCACGTGTAGACAACAGAAGAAGAATCTAG

Protein sequence

MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI
Homology
[Close]
BLAST of MC04g1994 vs. ExPASy Swiss-Prot
Match: A4FVJ7 (RNA-binding protein 48 OS=Danio rerio OX=7955 GN=rbm48 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23
Identity = 65/164 (39.63%), Postives = 103/164 (62.80%), Query Frame = 0 

Query: 2   PRYTDEH--PAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECD 61
           P+Y +     AV+VYTI  ESR+L+V+ VPA+G   +L++LF+ YG +EE +P+D    +
Sbjct: 30  PKYREGRRLKAVKVYTINLESRYLLVQGVPAIGVMAELVQLFALYGVIEEYRPLDEYPAE 89

Query: 62  EFTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREV-- 121
           +FT+VY ++F  + +AR AKR  DE  F G +L V YAPE+E++ +TK+KL+ RRR V  
Sbjct: 90  QFTEVYLIQFQKLTSARAAKRHTDEKSFFGGQLHVCYAPEYETVEETKQKLQDRRRYVNW 149

Query: 122 ----LARLDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKR 158
                A+L S +++   V + ++  T+   +   + QKN  E R
Sbjct: 150 ASQNAAKLHSQQAE---VNTESSSSTDTRTAEAPIMQKNPEEAR 190

[Close]
BLAST of MC04g1994 vs. ExPASy Swiss-Prot
Match: Q5R4U2 (RNA-binding protein 48 OS=Pongo abelii OX=9601 GN=RBM48 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.8e-21
Identity = 49/109 (44.95%), Postives = 78/109 (71.56%), Query Frame = 0 

Query: 10  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKF 69
           AV+VYTI  ES++L+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY +KF
Sbjct: 35  AVKVYTINLESQYLLIQGVPAVGVMKELVERFALYGTIEQYNALDEYPAEDFTEVYLIKF 94

Query: 70  HLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL 119
             + +AR AKRK+DE  F G  L V YAPEFE++ +T++KL+VR+  V+
Sbjct: 95  MNLQSARAAKRKMDEQSFFGGLLHVCYAPEFETVEETRKKLQVRKAYVV 143

[Close]
BLAST of MC04g1994 vs. ExPASy Swiss-Prot
Match: Q5RL73 (RNA-binding protein 48 OS=Homo sapiens OX=9606 GN=RBM48 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.7e-21
Identity = 48/109 (44.04%), Postives = 78/109 (71.56%), Query Frame = 0 

Query: 10  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKF 69
           AV+VYTI  ES++L+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY +KF
Sbjct: 35  AVKVYTINLESQYLLIQGVPAVGVMKELVERFALYGAIEQYNALDEYPAEDFTEVYLIKF 94

Query: 70  HLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVL 119
             + +AR AKRK+DE  F G  L V YAPEFE++ +T++KL++R+  V+
Sbjct: 95  MNLQSARTAKRKMDEQSFFGGLLHVCYAPEFETVEETRKKLQMRKAYVV 143

[Close]
BLAST of MC04g1994 vs. ExPASy Swiss-Prot
Match: Q561R3 (RNA-binding protein 48 OS=Rattus norvegicus OX=10116 GN=Rbm48 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.7e-21
Identity = 47/105 (44.76%), Postives = 75/105 (71.43%), Query Frame = 0 

Query: 10  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKF 69
           AV+VYTI  ES++L+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY +KF
Sbjct: 35  AVKVYTINLESQYLLIQGVPAVGAMKELVERFALYGAIEQYNALDEYPAEDFTEVYLIKF 94

Query: 70  HLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR 115
             + +AR AK+K+DE  F G  L V YAPEFE++ +T++KLE R+
Sbjct: 95  VKLQSARIAKKKMDEQSFFGGLLHVCYAPEFETVEETRKKLEERK 139

[Close]
BLAST of MC04g1994 vs. ExPASy Swiss-Prot
Match: Q8K2X2 (RNA-binding protein 48 OS=Mus musculus OX=10090 GN=Rbm48 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-20
Identity = 46/105 (43.81%), Postives = 75/105 (71.43%), Query Frame = 0 

Query: 10  AVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKF 69
           AV+VYTI  ES++L+++ VPA+G   +L++ F+ YG +E+   +D    ++FT+VY +KF
Sbjct: 35  AVKVYTINLESQYLLIQGVPAVGAMKELVERFALYGAIEQYNALDEYPAEDFTEVYLIKF 94

Query: 70  HLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR 115
             + +AR AK+K+DE  F G  L V YAPEFE++ +T++KL+ R+
Sbjct: 95  VKLQSARVAKKKMDEQSFFGGLLHVCYAPEFETVEETRKKLQERK 139

[Close]
BLAST of MC04g1994 vs. NCBI nr
Match: XP_022152542.1 (RNA-binding protein 48-like [Momordica charantia])

HSP 1 Score: 446 bits (1146), Expect = 9.68e-158
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE
Sbjct: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ
Sbjct: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI
Sbjct: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226

[Close]
BLAST of MC04g1994 vs. NCBI nr
Match: XP_022997621.1 (RNA-binding protein 48 isoform X1 [Cucurbita maxima])

HSP 1 Score: 407 bits (1046), Expect = 1.70e-142
Identity = 203/226 (89.82%), Postives = 218/226 (96.46%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           LDSGR +GSAV S TTK TNP+HSHYTLEQKNSLEKRNYGDAAL +NPHVSQ+T+VSSDQ
Sbjct: 121 LDSGRPRGSAVNSATTKFTNPSHSHYTLEQKNSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLDKIQS SEHLE GP+SK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC04g1994 vs. NCBI nr
Match: KAG6598220.1 (RNA-binding protein 48, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 404 bits (1037), Expect = 4.00e-141
Identity = 202/226 (89.38%), Postives = 217/226 (96.02%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           LDSGR +GSAV S TTK TNP+HSHYTLEQKNSLEKRNYGDAAL +NPHVSQ+T+VSSDQ
Sbjct: 121 LDSGRPRGSAVNSATTKFTNPSHSHYTLEQKNSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLDKIQS SE LE GP+SK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEDLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC04g1994 vs. NCBI nr
Match: XP_022961642.1 (RNA-binding protein 48 isoform X1 [Cucurbita moschata])

HSP 1 Score: 403 bits (1036), Expect = 5.68e-141
Identity = 201/226 (88.94%), Postives = 218/226 (96.46%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           L+SGR +GSAV S TTK TNP+HSHYTLEQK+SLEKRNYGDAAL +NPHVSQ+T+VSSDQ
Sbjct: 121 LNSGRPRGSAVNSATTKFTNPSHSHYTLEQKSSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLDKIQS SEHLE GP+SK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC04g1994 vs. NCBI nr
Match: XP_023545649.1 (RNA-binding protein 48 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403 bits (1035), Expect = 8.07e-141
Identity = 201/226 (88.94%), Postives = 216/226 (95.58%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           LDSGR +GSAV S TTK TNP+HSHYTLEQKNSLEKRNY DAAL +NPHVSQ+T+VSSDQ
Sbjct: 121 LDSGRPRGSAVNSATTKFTNPSHSHYTLEQKNSLEKRNYADAALSSNPHVSQITRVSSDQ 180

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLDKIQS  EHLE GP+SK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCCEHLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC04g1994 vs. ExPASy TrEMBL
Match: A0A6J1DGJ2 (RNA-binding protein 48 OS=Momordica charantia OX=3673 GN=LOC111020241 PE=3 SV=1)

HSP 1 Score: 446 bits (1146), Expect = 4.69e-158
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE
Sbjct: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ
Sbjct: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI
Sbjct: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226

[Close]
BLAST of MC04g1994 vs. ExPASy TrEMBL
Match: A0A6J1K7Z4 (RNA-binding protein 48 OS=Cucurbita maxima OX=3661 GN=LOC111492499 PE=3 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 8.23e-143
Identity = 203/226 (89.82%), Postives = 218/226 (96.46%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           LDSGR +GSAV S TTK TNP+HSHYTLEQKNSLEKRNYGDAAL +NPHVSQ+T+VSSDQ
Sbjct: 121 LDSGRPRGSAVNSATTKFTNPSHSHYTLEQKNSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLDKIQS SEHLE GP+SK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC04g1994 vs. ExPASy TrEMBL
Match: A0A6J1HAQ6 (RNA-binding protein 48 OS=Cucurbita moschata OX=3662 GN=LOC111462353 PE=3 SV=1)

HSP 1 Score: 403 bits (1036), Expect = 2.75e-141
Identity = 201/226 (88.94%), Postives = 218/226 (96.46%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYT+E PAVRVYTICDESR+LIVRNVPALGCGD+LLKLFSSYGN+EECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYTICDESRYLIVRNVPALGCGDELLKLFSSYGNLEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFVKFHLVSNARFAKRKLDEFVFLGNRLQVSYAPDFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           L+SGR +GSAV S TTK TNP+HSHYTLEQK+SLEKRNYGDAAL +NPHVSQ+T+VSSDQ
Sbjct: 121 LNSGRPRGSAVNSATTKFTNPSHSHYTLEQKSSLEKRNYGDAALSSNPHVSQITRVSSDQ 180

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLDKIQS SEHLE GP+SK+SRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDKIQSCSEHLEAGPVSKRSRVDNRRRI 226

[Close]
BLAST of MC04g1994 vs. ExPASy TrEMBL
Match: A0A6J1BRX6 (RNA-binding protein 48 OS=Momordica charantia OX=3673 GN=LOC111005197 PE=3 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 7.88e-141
Identity = 203/226 (89.82%), Postives = 216/226 (95.58%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MPRYT+E PAVRVY ICDESR+LIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE
Sbjct: 1   MPRYTNEPPAVRVYAICDESRYLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYF+KFHLV NARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 61  FTDVYFIKFHLVNNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           L+ GRSKGS+VRST T L+NP+HSHY LEQK SLEKRNYGDAALI+NP VSQMTKVSSDQ
Sbjct: 121 LNLGRSKGSSVRSTATDLSNPSHSHYALEQKYSLEKRNYGDAALISNPRVSQMTKVSSDQ 180

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLD+IQSSSEHL+ GP+SKKSRVDNRRRI
Sbjct: 181 DYFASESMNQTVHLVREKLDQIQSSSEHLQAGPVSKKSRVDNRRRI 226

[Close]
BLAST of MC04g1994 vs. ExPASy TrEMBL
Match: A0A0A0LQL2 (RNA-binding protein 48 OS=Cucumis sativus OX=3659 GN=Csa_2G348830 PE=3 SV=1)

HSP 1 Score: 391 bits (1004), Expect = 6.47e-136
Identity = 197/226 (87.17%), Postives = 212/226 (93.81%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           MP + DE  AVR YT+CDESR+LIVRNVPALGCGDDL KLFSSYGN+EECKPMDAEECDE
Sbjct: 33  MPCFRDESLAVRAYTVCDESRYLIVRNVPALGCGDDLHKLFSSYGNLEECKPMDAEECDE 92

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVYFVKFHLV NARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Sbjct: 93  FTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 152

Query: 121 LDSGRSKGSAVRSTTTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQ 180
           LDSGR +G+AV STT KLTN + SHYTL+QKNSLEKRNYGDAALI+NPHVSQ+T+VSSDQ
Sbjct: 153 LDSGRPRGTAVSSTTAKLTNQSRSHYTLKQKNSLEKRNYGDAALISNPHVSQITRVSSDQ 212

Query: 181 DHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMSKKSRVDNRRRI 226
           D+FASESMN+TVHLVREKLDKIQSSSEHL+ GP SKKSR+DNRRRI
Sbjct: 213 DYFASESMNQTVHLVREKLDKIQSSSEHLQAGPASKKSRMDNRRRI 258

[Close]
BLAST of MC04g1994 vs. TAIR 10
Match: AT2G27790.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-64
Identity = 136/251 (54.18%), Postives = 169/251 (67.33%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           M RY DE PAVRVYT+CDESR++IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C E
Sbjct: 1   MGRYKDETPAVRVYTVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVY++KF L+ NARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Sbjct: 61  FTDVYWIKFRLITNARFAKRKLDESSFLGNRLQISYAPEYENVNDTKDKLESRRKEVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPA--HSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSS 180
           L+  + K +   S  TKL  PA   +     Q+  +E + +   A         +T+VSS
Sbjct: 121 LNPQKEKST---SQVTKLAGPALTQTDNVSSQRREMEYQFHRGNA--------PVTRVSS 180

Query: 181 DQDHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMS----------------------- 227
           DQ++FAS SMN+TV  VREKL+KI+ S       P S                       
Sbjct: 181 DQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQIQPDL 240

[Close]
BLAST of MC04g1994 vs. TAIR 10
Match: AT2G27790.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 244.2 bits (622), Expect = 1.0e-64
Identity = 136/251 (54.18%), Postives = 169/251 (67.33%), Query Frame = 0 

Query: 1   MPRYTDEHPAVRVYTICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDE 60
           M RY DE PAVRVYT+CDESR++IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C E
Sbjct: 1   MGRYKDETPAVRVYTVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAE 60

Query: 61  FTDVYFVKFHLVANARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR 120
           FTDVY++KF L+ NARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Sbjct: 61  FTDVYWIKFRLITNARFAKRKLDESSFLGNRLQISYAPEYENVNDTKDKLESRRKEVLAR 120

Query: 121 LDSGRSKGSAVRSTTTKLTNPA--HSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSS 180
           L+  + K +   S  TKL  PA   +     Q+  +E + +   A         +T+VSS
Sbjct: 121 LNPQKEKST---SQVTKLAGPALTQTDNVSSQRREMEYQFHRGNA--------PVTRVSS 180

Query: 181 DQDHFASESMNRTVHLVREKLDKIQSSSEHLEGGPMS----------------------- 227
           DQ++FAS SMN+TV  VREKL+KI+ S       P S                       
Sbjct: 181 DQEYFASSSMNQTVKTVREKLNKIEESGNQKRLQPSSQTQPEESGNQKRLQPSSQIQPDL 240

[Close]
BLAST of MC04g1994 vs. TAIR 10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 211.5 bits (537), Expect = 7.2e-55
Identity = 120/218 (55.05%), Postives = 153/218 (70.18%), Query Frame = 0 

Query: 15  TICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVAN 74
           ++CDESR++IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY++KF L+ N
Sbjct: 371 SVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAEFTDVYWIKFRLITN 430

Query: 75  ARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRSKGSAVRST 134
           A    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLARL+  ++K +   S 
Sbjct: 431 A----RKLDESSFLGNRLQISYAPEYESVSDTKEKLETRRKEVLARLNPHKAKST---SQ 490

Query: 135 TTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHL 194
            TKL  PA     L Q ++   R   +     +   + +T+VSS Q++FAS SMN+ V  
Sbjct: 491 VTKLAGPA-----LTQTDNFSPRR-REMDYQFHRGNAPVTRVSSYQEYFASSSMNQMVKT 550

Query: 195 VREKLDKIQSSSEHLEGGPMS------KKSRVDNRRRI 227
           VREKL+KI+ S       P S      K++RVDNRRRI
Sbjct: 551 VREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 575

[Close]
BLAST of MC04g1994 vs. TAIR 10
Match: AT5G27300.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 211.5 bits (537), Expect = 7.2e-55
Identity = 120/218 (55.05%), Postives = 153/218 (70.18%), Query Frame = 0 

Query: 15  TICDESRFLIVRNVPALGCGDDLLKLFSSYGNVEECKPMDAEECDEFTDVYFVKFHLVAN 74
           ++CDESR++IVRNVPALGCGDDL++LF +YG VEECKPMDAE+C EFTDVY++KF L+ N
Sbjct: 346 SVCDESRYMIVRNVPALGCGDDLMRLFMTYGEVEECKPMDAEDCAEFTDVYWIKFRLITN 405

Query: 75  ARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRSKGSAVRST 134
           A    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLARL+  ++K +   S 
Sbjct: 406 A----RKLDESSFLGNRLQISYAPEYESVSDTKEKLETRRKEVLARLNPHKAKST---SQ 465

Query: 135 TTKLTNPAHSHYTLEQKNSLEKRNYGDAALIANPHVSQMTKVSSDQDHFASESMNRTVHL 194
            TKL  PA     L Q ++   R   +     +   + +T+VSS Q++FAS SMN+ V  
Sbjct: 466 VTKLAGPA-----LTQTDNFSPRR-REMDYQFHRGNAPVTRVSSYQEYFASSSMNQMVKT 525

Query: 195 VREKLDKIQSSSEHLEGGPMS------KKSRVDNRRRI 227
           VREKL+KI+ S       P S      K++RVDNRRRI
Sbjct: 526 VREKLNKIEESGNQKRLQPSSQTQPDFKRTRVDNRRRI 550

The following BLAST results are available for this feature:
BLAST of MC04g1994 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A4FVJ71.1e-2339.63RNA-binding protein 48 OS=Danio rerio OX=7955 GN=rbm48 PE=2 SV=1[more]
Q5R4U21.8e-2144.95RNA-binding protein 48 OS=Pongo abelii OX=9601 GN=RBM48 PE=2 SV=1[more]
Q5RL736.7e-2144.04RNA-binding protein 48 OS=Homo sapiens OX=9606 GN=RBM48 PE=1 SV=1[more]
Q561R38.7e-2144.76RNA-binding protein 48 OS=Rattus norvegicus OX=10116 GN=Rbm48 PE=2 SV=1[more]
Q8K2X22.5e-2043.81RNA-binding protein 48 OS=Mus musculus OX=10090 GN=Rbm48 PE=2 SV=2[more]
BLAST of MC04g1994 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152542.19.68e-158100.00RNA-binding protein 48-like [Momordica charantia][more]
XP_022997621.11.70e-14289.82RNA-binding protein 48 isoform X1 [Cucurbita maxima][more]
KAG6598220.14.00e-14189.38RNA-binding protein 48, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022961642.15.68e-14188.94RNA-binding protein 48 isoform X1 [Cucurbita moschata][more]
XP_023545649.18.07e-14188.94RNA-binding protein 48 [Cucurbita pepo subsp. pepo][more]
BLAST of MC04g1994 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DGJ24.69e-158100.00RNA-binding protein 48 OS=Momordica charantia OX=3673 GN=LOC111020241 PE=3 SV=1[more]
A0A6J1K7Z48.23e-14389.82RNA-binding protein 48 OS=Cucurbita maxima OX=3661 GN=LOC111492499 PE=3 SV=1[more]
A0A6J1HAQ62.75e-14188.94RNA-binding protein 48 OS=Cucurbita moschata OX=3662 GN=LOC111462353 PE=3 SV=1[more]
A0A6J1BRX67.88e-14189.82RNA-binding protein 48 OS=Momordica charantia OX=3673 GN=LOC111005197 PE=3 SV=1[more]
A0A0A0LQL26.47e-13687.17RNA-binding protein 48 OS=Cucumis sativus OX=3659 GN=Csa_2G348830 PE=3 SV=1[more]
BLAST of MC04g1994 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27790.11.0e-6454.18RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT2G27790.21.0e-6454.18RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G27300.17.2e-5555.05pentatricopeptide (PPR) repeat-containing protein [more]
AT5G27300.27.2e-5555.05pentatricopeptide (PPR) repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 17..114
e-value: 1.2E-9
score: 40.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 23..92
e-value: 1.3E-6
score: 28.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 21..99
score: 9.916748
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..226
IPR039599RNA-binding protein 48PANTHERPTHR20957UNCHARACTERIZEDcoord: 3..226
IPR034264RBM48, RNA recognition motifCDDcd12442RRM_RBM48coord: 11..110
e-value: 5.2785E-56
score: 171.707
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 8..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g1994.1MC04g1994.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding