MC04g1951 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1951
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Protein of unknown function (DUF 3339)
Location	MC04: 26329043 .. 26329249 (+)
RNA-Seq Expression	MC04g1951
Synteny	MC04g1951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTGGGGGCCGGTGCTCATCGCGGTAGTACTGTTCGTGGTTCTGAGCCCGGGAGTGCTGTTTCAACTCCCCGGAAAGGGCCGAGTGGTCGAGTTCGTGAACCTGAAGACGAGCGCCATCTCCGTCTTCGTCCACACTCTCATCTTCTTCGGCCTCATCACTATTTTTCTCATTGCTATCGGTGTTCACATCACCACTGGT

mRNA sequence

ATGGCGGATTGGGGGCCGGTGCTCATCGCGGTAGTACTGTTCGTGGTTCTGAGCCCGGGAGTGCTGTTTCAACTCCCCGGAAAGGGCCGAGTGGTCGAGTTCGTGAACCTGAAGACGAGCGCCATCTCCGTCTTCGTCCACACTCTCATCTTCTTCGGCCTCATCACTATTTTTCTCATTGCTATCGGTGTTCACATCACCACTGGT

Coding sequence (CDS)

ATGGCGGATTGGGGGCCGGTGCTCATCGCGGTAGTACTGTTCGTGGTTCTGAGCCCGGGAGTGCTGTTTCAACTCCCCGGAAAGGGCCGAGTGGTCGAGTTCGTGAACCTGAAGACGAGCGCCATCTCCGTCTTCGTCCACACTCTCATCTTCTTCGGCCTCATCACTATTTTTCTCATTGCTATCGGTGTTCACATCACCACTGGT

Protein sequence

MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLIAIGVHITTG

Homology

[Close]

BLAST of MC04g1951 vs. NCBI nr
Match: XP_022134280.1 (uncharacterized protein LOC111006581 [Momordica charantia])

HSP 1 Score: 129 bits (324), Expect = 1.88e-37
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI
Sbjct: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60

Query: 61 AIGVHITTG 69
          AIGVHITTG
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of MC04g1951 vs. NCBI nr
Match: OAY25532.1 (hypothetical protein MANES_17G102200v8 [Manihot esculenta])

HSP 1 Score: 119 bits (298), Expect = 1.74e-33
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPV++AVVLFVVLSPGVLFQLPGKGRVVEF N++TS  SVFVHT+IFFGLITIFLI
Sbjct: 1  MADWGPVVVAVVLFVVLSPGVLFQLPGKGRVVEFANMQTSGASVFVHTIIFFGLITIFLI 60

Query: 61 AIGVHITTG 69
          AIG+HITTG
Sbjct: 61 AIGIHITTG 69

[Close]

BLAST of MC04g1951 vs. NCBI nr
Match: XP_037491426.1 (uncharacterized protein LOC105632430 [Jatropha curcas])

HSP 1 Score: 118 bits (296), Expect = 3.52e-33
Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPV+IAVVLFVVLSPGVLFQLPGK RVVEFVN++TS +SV VHT+IFFGLITIFLI
Sbjct: 1  MADWGPVVIAVVLFVVLSPGVLFQLPGKSRVVEFVNMQTSGVSVLVHTIIFFGLITIFLI 60

Query: 61 AIGVHITTG 69
          AIGVHITTG
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of MC04g1951 vs. NCBI nr
Match: XP_002509498.1 (uncharacterized protein LOC8271433 [Ricinus communis] >EEF50885.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 118 bits (295), Expect = 5.00e-33
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPV+IAVVLFVVLSPGVLFQLPG  RVVEF NL+TS +SVFVHT+IFFGLITIFLI
Sbjct: 1  MADWGPVVIAVVLFVVLSPGVLFQLPGNSRVVEFANLQTSGVSVFVHTIIFFGLITIFLI 60

Query: 61 AIGVHITTG 69
          AIGVHITTG
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of MC04g1951 vs. NCBI nr
Match: XP_021648773.1 (uncharacterized protein LOC110641381 [Hevea brasiliensis])

HSP 1 Score: 117 bits (292), Expect = 1.44e-32
Identity = 59/69 (85.51%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPV++AVVLFVVLSPG+LFQLPGKGRVVEF N++TS  SVFVHT+IFFGLITIFLI
Sbjct: 1  MADWGPVVVAVVLFVVLSPGLLFQLPGKGRVVEFGNMQTSGASVFVHTIIFFGLITIFLI 60

Query: 61 AIGVHITTG 69
          AIG+HITTG
Sbjct: 61 AIGIHITTG 69

[Close]

BLAST of MC04g1951 vs. ExPASy TrEMBL
Match: A0A6J1BXW3 (uncharacterized protein LOC111006581 OS=Momordica charantia OX=3673 GN=LOC111006581 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 9.08e-38
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI
Sbjct: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60

Query: 61 AIGVHITTG 69
          AIGVHITTG
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of MC04g1951 vs. ExPASy TrEMBL
Match: A0A2C9U7J2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102200 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 8.44e-34
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPV++AVVLFVVLSPGVLFQLPGKGRVVEF N++TS  SVFVHT+IFFGLITIFLI
Sbjct: 1  MADWGPVVVAVVLFVVLSPGVLFQLPGKGRVVEFANMQTSGASVFVHTIIFFGLITIFLI 60

Query: 61 AIGVHITTG 69
          AIG+HITTG
Sbjct: 61 AIGIHITTG 69

[Close]

BLAST of MC04g1951 vs. ExPASy TrEMBL
Match: B9RBG4 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1676560 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 2.42e-33
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPV+IAVVLFVVLSPGVLFQLPG  RVVEF NL+TS +SVFVHT+IFFGLITIFLI
Sbjct: 1  MADWGPVVIAVVLFVVLSPGVLFQLPGNSRVVEFANLQTSGVSVFVHTIIFFGLITIFLI 60

Query: 61 AIGVHITTG 69
          AIGVHITTG
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of MC04g1951 vs. ExPASy TrEMBL
Match: A0A165WN85 (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_015109 PE=4 SV=1)

HSP 1 Score: 112 bits (281), Expect = 3.32e-31
Identity = 55/69 (79.71%), Postives = 64/69 (92.75%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPV+IAVVLFV+L+PG+LFQLPGK R +EF N +TS +S+FVHT+IFFGLITIFLI
Sbjct: 1  MADWGPVVIAVVLFVLLTPGLLFQLPGKSRAIEFANFQTSGVSIFVHTIIFFGLITIFLI 60

Query: 61 AIGVHITTG 69
          AIGVHITTG
Sbjct: 61 AIGVHITTG 69

[Close]

BLAST of MC04g1951 vs. ExPASy TrEMBL
Match: A0A1S3B351 (uncharacterized protein LOC103485470 OS=Cucumis melo OX=3656 GN=LOC103485470 PE=4 SV=1)

HSP 1 Score: 112 bits (281), Expect = 3.32e-31
Identity = 57/69 (82.61%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          M DWGPVLIAV+LFVVLSPGVLFQLPG  RVV+FVN++TSAISVFVH++IFFGLITIF+I
Sbjct: 1  MGDWGPVLIAVILFVVLSPGVLFQLPGNDRVVQFVNMQTSAISVFVHSIIFFGLITIFVI 60

Query: 61 AIGVHITTG 69
          AIGVHI++G
Sbjct: 61 AIGVHISSG 69

[Close]

BLAST of MC04g1951 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 99.8 bits (247), Expect = 9.4e-22
Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPVLIAV+LFVVLSPG+LFQ+P  GRVVEF N++TS  S+ VH +IFFGLITIF I
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 AIGVHITTG 70
          AI VHI +G
Sbjct: 61 AINVHIYSG 69

[Close]

BLAST of MC04g1951 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 99.0 bits (245), Expect = 1.6e-21
Identity = 48/69 (69.57%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          MADWGPV++AV+LFV+L+PG+LFQ+P +GRVVEF N++TS  S+ VHT+IFFGLITIF I
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 AIGVHITTG 70
          AI +HI TG
Sbjct: 61 AIRLHIYTG 69

[Close]

BLAST of MC04g1951 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 87.8 bits (216), Expect = 3.7e-18
Identity = 40/69 (57.97%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 1  MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
          M+DWGPVL+ V+LFV+L+PG+LFQLPG+ + VEF N +TSA+SV VH+L++F L+ +FL+
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 AIGVHITTG 70
          A+ +HI  G
Sbjct: 61 ALKIHIYIG 69

[Close]

BLAST of MC04g1951 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.0 bits (206), Expect = 5.3e-17
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 1   MADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLI 60
           MADW PVL+ VVLFV+LSPG+LF LPG  R V+F  LKT+  ++ VHTLIFF + TI ++
Sbjct: 74  MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133

Query: 61  AIGVHITTG 70
           A+ +HI TG
Sbjct: 134 ALNLHIYTG 142

[Close]

BLAST of MC04g1951 vs. TAIR 10
Match: AT3G01940.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 83.6 bits (205), Expect = 6.9e-17
Identity = 42/65 (64.62%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 2  ADWGPVLIAVVLFVVLSPGVLFQLPGKGRVVEFVNLKTSAISVFVHTLIFFGLITIFLIA 61
          ADWGPV +AVVLFVVLSPG+LFQLP + RV+E  N+ TS IS+ VH ++FF +ITI +IA
Sbjct: 4  ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63

Query: 62 IGVHI 67
          I +HI
Sbjct: 64 IQIHI 68

The following BLAST results are available for this feature:

BLAST of MC04g1951 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g1951 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134280.1	1.88e-37	100.00	uncharacterized protein LOC111006581 [Momordica charantia]	[more]
OAY25532.1	1.74e-33	86.96	hypothetical protein MANES_17G102200v8 [Manihot esculenta]	[more]
XP_037491426.1	3.52e-33	88.41	uncharacterized protein LOC105632430 [Jatropha curcas]	[more]
XP_002509498.1	5.00e-33	88.41	uncharacterized protein LOC8271433 [Ricinus communis] >EEF50885.1 conserved hypo...	[more]
XP_021648773.1	1.44e-32	85.51	uncharacterized protein LOC110641381 [Hevea brasiliensis]	[more]

BLAST of MC04g1951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXW3	9.08e-38	100.00	uncharacterized protein LOC111006581 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A2C9U7J2	8.44e-34	86.96	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G102200 PE=4 SV=...	[more]
B9RBG4	2.42e-33	88.41	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1676560 PE=4 SV=1	[more]
A0A165WN85	3.32e-31	79.71	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_015109 ...	[more]
A0A1S3B351	3.32e-31	82.61	uncharacterized protein LOC103485470 OS=Cucumis melo OX=3656 GN=LOC103485470 PE=...	[more]

BLAST of MC04g1951 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63500.1	9.4e-22	73.91	Protein of unknown function (DUF 3339)	[more]
AT3G48660.1	1.6e-21	69.57	Protein of unknown function (DUF 3339)	[more]
AT5G08391.1	3.7e-18	57.97	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	5.3e-17	59.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G01940.1	6.9e-17	64.62	Protein of unknown function (DUF 3339)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..66 e-value: 1.6E-33 score: 114.7
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 1..69
None	No IPR available	PANTHER	PTHR33128:SF69	SUBFAMILY NOT NAMED	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1951.1	MC04g1951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane