MC04g1949 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1949
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC04: 26326485 .. 26326619 (-)
RNA-Seq Expression	MC04g1949
Synteny	MC04g1949

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTGCCGTTGGTCTTCATACTGCCGAACTCAAACTGCCGATTATTCCCCGGGAACTGGAACAGAAGCCCCGGCGAGAGCAGCACGAACAGTACAACGCCGATCACCACTGGCGCCCAATCCGACATCGTT

mRNA sequence

ATGGCCTTGCCGTTGGTCTTCATACTGCCGAACTCAAACTGCCGATTATTCCCCGGGAACTGGAACAGAAGCCCCGGCGAGAGCAGCACGAACAGTACAACGCCGATCACCACTGGCGCCCAATCCGACATCGTT

Coding sequence (CDS)

ATGGCCTTGCCGTTGGTCTTCATACTGCCGAACTCAAACTGCCGATTATTCCCCGGGAACTGGAACAGAAGCCCCGGCGAGAGCAGCACGAACAGTACAACGCCGATCACCACTGGCGCCCAATCCGACATCGTT

Protein sequence

MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDIV

Homology

[Close]

BLAST of MC04g1949 vs. NCBI nr
Match: MBA0697719.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 72.4 bits (176), Expect = 4.83e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDI 44
          MALPLVF+LPNS+C LFPGN N+SPG+S+TNSTTPI TGAQS I
Sbjct: 1  MALPLVFMLPNSSCLLFPGNENKSPGDSNTNSTTPIRTGAQSAI 44

[Close]

BLAST of MC04g1949 vs. NCBI nr
Match: KJB76379.1 (hypothetical protein B456_012G085800 [Gossypium raimondii])

HSP 1 Score: 72.4 bits (176), Expect = 6.09e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDI 44
          MALPLVF+LPNS+C LFPGN N+SPG+S+TNSTTPI TGAQS I
Sbjct: 11 MALPLVFMLPNSSCLLFPGNENKSPGDSNTNSTTPIRTGAQSAI 54

[Close]

BLAST of MC04g1949 vs. NCBI nr
Match: KAG4151611.1 (hypothetical protein ERO13_D04G076050v2 [Gossypium hirsutum])

HSP 1 Score: 72.4 bits (176), Expect = 6.25e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDI 44
          MALPLVF+LPNS+C LFPGN N+SPG+S+TNSTTPI TGAQS I
Sbjct: 11 MALPLVFMLPNSSCLLFPGNENKSPGDSNTNSTTPIRTGAQSAI 54

[Close]

BLAST of MC04g1949 vs. NCBI nr
Match: TYI86728.1 (hypothetical protein E1A91_D04G085500v1 [Gossypium mustelinum])

HSP 1 Score: 72.4 bits (176), Expect = 6.25e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDI 44
          MALPLVF+LPNS+C LFPGN N+SPG+S+TNSTTPI TGAQS I
Sbjct: 11 MALPLVFMLPNSSCLLFPGNENKSPGDSNTNSTTPIRTGAQSAI 54

[Close]

BLAST of MC04g1949 vs. NCBI nr
Match: KAB2084759.1 (hypothetical protein ES319_A05G355500v1 [Gossypium barbadense] >KAG4202427.1 hypothetical protein ERO13_A05G337466v2 [Gossypium hirsutum])

HSP 1 Score: 72.4 bits (176), Expect = 6.25e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDI 44
          MALPLVF+LPNS+C LFPGN N+SPG+S+TNSTTPI TGAQS I
Sbjct: 11 MALPLVFMLPNSSCLLFPGNENKSPGDSNTNSTTPIRTGAQSAI 54

[Close]

BLAST of MC04g1949 vs. ExPASy TrEMBL
Match: A0A7J8YFC7 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_021247 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.34e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDI 44
          MALPLVF+LPNS+C LFPGN N+SPG+S+TNSTTPI TGAQS I
Sbjct: 1  MALPLVFMLPNSSCLLFPGNENKSPGDSNTNSTTPIRTGAQSAI 44

[Close]

BLAST of MC04g1949 vs. ExPASy TrEMBL
Match: A0A0D2V3W8 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G085800 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.95e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDI 44
          MALPLVF+LPNS+C LFPGN N+SPG+S+TNSTTPI TGAQS I
Sbjct: 11 MALPLVFMLPNSSCLLFPGNENKSPGDSNTNSTTPIRTGAQSAI 54

[Close]

BLAST of MC04g1949 vs. ExPASy TrEMBL
Match: A0A5J5VYN1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G355500v1 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.03e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDI 44
          MALPLVF+LPNS+C LFPGN N+SPG+S+TNSTTPI TGAQS I
Sbjct: 11 MALPLVFMLPNSSCLLFPGNENKSPGDSNTNSTTPIRTGAQSAI 54

[Close]

BLAST of MC04g1949 vs. ExPASy TrEMBL
Match: A0A5D2VBH2 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G085500v1 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.03e-15
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDI 44
          MALPLVF+LPNS+C LFPGN N+SPG+S+TNSTTPI TGAQS I
Sbjct: 11 MALPLVFMLPNSSCLLFPGNENKSPGDSNTNSTTPIRTGAQSAI 54

[Close]

BLAST of MC04g1949 vs. ExPASy TrEMBL
Match: A0A2P2QIQ8 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.04e-14
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 0


Query: 1  MALPLVFILPNSNCRLFPGNWNRSPGESSTNSTTPITTGAQSDIV 45
          MALPLVF +PNS  RLFPG WN+SPG SSTNSTTPI+TG QS I+
Sbjct: 1  MALPLVFKVPNSRLRLFPGIWNKSPGVSSTNSTTPISTGPQSAIL 45

The following BLAST results are available for this feature:

BLAST of MC04g1949 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g1949 vs. NCBI nr


Match Name	E-value	Identity	Description
MBA0697719.1	4.83e-15	79.55	hypothetical protein [Gossypium aridum]	[more]
KJB76379.1	6.09e-15	79.55	hypothetical protein B456_012G085800 [Gossypium raimondii]	[more]
KAG4151611.1	6.25e-15	79.55	hypothetical protein ERO13_D04G076050v2 [Gossypium hirsutum]	[more]
TYI86728.1	6.25e-15	79.55	hypothetical protein E1A91_D04G085500v1 [Gossypium mustelinum]	[more]
KAB2084759.1	6.25e-15	79.55	hypothetical protein ES319_A05G355500v1 [Gossypium barbadense] >KAG4202427.1 hyp...	[more]

BLAST of MC04g1949 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J8YFC7	2.34e-15	79.55	Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_021247 PE=4 SV=1	[more]
A0A0D2V3W8	2.95e-15	79.55	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G085800 PE=4 ...	[more]
A0A5J5VYN1	3.03e-15	79.55	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G355500v1 PE...	[more]
A0A5D2VBH2	3.03e-15	79.55	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G085500v1 P...	[more]
A0A2P2QIQ8	3.04e-14	75.56	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]

BLAST of MC04g1949 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1949.1	MC04g1949.1	mRNA