MC04g1889 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g1889
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionimmediate early response 3-interacting protein 1-like
LocationMC04: 25987840 .. 25988070 (-)
RNA-Seq ExpressionMC04g1889
SyntenyMC04g1889
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTGTGGACGCTATTAGAGGGTTGTCTGCTTCTTGCGAATGCACTAGCAATACTAAATGAAGATCGTTTTCTTGCTCCTCGTGGATTGAGCTTCTCCGAGTTCTCAGGAGGTAGAACAAAGTCATTCAAGGGGCAGCTTATAGGCCTTATCTACGCAACACAATATTTGAGGGTTCCTCTCATAATGCTCAATGCAATCTGTATCTTTGTAAAGTTGGTATCTGGA

mRNA sequence

ATGGGTTTGTGGACGCTATTAGAGGGTTGTCTGCTTCTTGCGAATGCACTAGCAATACTAAATGAAGATCGTTTTCTTGCTCCTCGTGGATTGAGCTTCTCCGAGTTCTCAGGAGGTAGAACAAAGTCATTCAAGGGGCAGCTTATAGGCCTTATCTACGCAACACAATATTTGAGGGTTCCTCTCATAATGCTCAATGCAATCTGTATCTTTGTAAAGTTGGTATCTGGA

Coding sequence (CDS)

ATGGGTTTGTGGACGCTATTAGAGGGTTGTCTGCTTCTTGCGAATGCACTAGCAATACTAAATGAAGATCGTTTTCTTGCTCCTCGTGGATTGAGCTTCTCCGAGTTCTCAGGAGGTAGAACAAAGTCATTCAAGGGGCAGCTTATAGGCCTTATCTACGCAACACAATATTTGAGGGTTCCTCTCATAATGCTCAATGCAATCTGTATCTTTGTAAAGTTGGTATCTGGA

Protein sequence

MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRVPLIMLNAICIFVKLVSG
Homology
BLAST of MC04g1889 vs. ExPASy Swiss-Prot
Match: Q3B8G7 (Immediate early response 3-interacting protein 1 OS=Xenopus laevis OX=8355 GN=ier3ip1 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-05
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L+TLL+  LL  NA+A+L+E+RFL+  G       G  G     K QL+ LI + +  +R
Sbjct: 5  LYTLLQAALLCVNAVAVLHEERFLSKIGWGVDHGIGGFGEEPGMKSQLMNLIRSVRTVMR 64

Query: 63 VPLIMLNAICIFVKLVSG 78
          VPLI++N++ I + L+ G
Sbjct: 65 VPLIIVNSVTIVLLLLFG 82

BLAST of MC04g1889 vs. ExPASy Swiss-Prot
Match: Q4VBI2 (Immediate early response 3-interacting protein 1 OS=Danio rerio OX=7955 GN=ier3ip1 PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.9e-05
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L+ L++  +L  NA+A+L+E+RFL+  G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYALIQTAILFTNAIAVLHEERFLSKIGWGAEQGVGGFGDDPGIKAQLLNLIRSVRTVMR 64

Query: 63 VPLIMLNAICIFVKLVSG 78
          VPLI +N++CI + L+ G
Sbjct: 65 VPLIAVNSVCIVLLLLFG 82

BLAST of MC04g1889 vs. ExPASy Swiss-Prot
Match: Q1JQC2 (Immediate early response 3-interacting protein 1 OS=Bos taurus OX=9913 GN=IER3IP1 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 6.6e-05
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L++LL+  LL  NA+A+L+E+RFL   G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMR 64

Query: 63 VPLIMLNAICIFVKLVSG 78
          VPLI++N+I I + L+ G
Sbjct: 65 VPLIIVNSIAIVLLLLFG 82

BLAST of MC04g1889 vs. ExPASy Swiss-Prot
Match: Q9Y5U9 (Immediate early response 3-interacting protein 1 OS=Homo sapiens OX=9606 GN=IER3IP1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 6.6e-05
Identity = 31/78 (39.74%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L++LL+  LL  NA+A+L+E+RFL   G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYSLLQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLMNLIRSVRTVMR 64

Query: 63 VPLIMLNAICIFVKLVSG 78
          VPLI++N+I I + L+ G
Sbjct: 65 VPLIIVNSIAIVLLLLFG 82

BLAST of MC04g1889 vs. ExPASy Swiss-Prot
Match: P85007 (Immediate early response 3-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Ier3ip1 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.1e-04
Identity = 30/78 (38.46%), Postives = 48/78 (61.54%), Query Frame = 0

Query: 3  LWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSG--GRTKSFKGQLIGLIYATQ-YLR 62
          L++L++  LL  NA+A+L+E+RFL   G    +  G  G     K QL+ LI + +  +R
Sbjct: 5  LYSLMQAALLCVNAIAVLHEERFLKNIGWGTDQGIGGFGEEPGIKSQLLNLIRSVRTVMR 64

Query: 63 VPLIMLNAICIFVKLVSG 78
          VPLI++N+I I + L+ G
Sbjct: 65 VPLIIVNSITIVLLLLFG 82

BLAST of MC04g1889 vs. NCBI nr
Match: XP_022134292.1 (immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_022134293.1 immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_038892190.1 immediate early response 3-interacting protein 1-like [Benincasa hispida] >XP_038892191.1 immediate early response 3-interacting protein 1-like [Benincasa hispida] >XP_038892192.1 immediate early response 3-interacting protein 1-like [Benincasa hispida] >XP_038892193.1 immediate early response 3-interacting protein 1-like [Benincasa hispida] >XP_038892194.1 immediate early response 3-interacting protein 1-like [Benincasa hispida])

HSP 1 Score: 150 bits (379), Expect = 1.33e-45
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNAICIFVKLVSG
Sbjct: 61 PLIMLNAICIFVKLVSG 77

BLAST of MC04g1889 vs. NCBI nr
Match: XP_031743934.1 (immediate early response 3-interacting protein 1 [Cucumis sativus])

HSP 1 Score: 149 bits (376), Expect = 3.81e-45
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGL+FSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNAICIFVKLVSG
Sbjct: 61 PLIMLNAICIFVKLVSG 77

BLAST of MC04g1889 vs. NCBI nr
Match: XP_008441413.1 (PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo] >XP_008441414.1 PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo] >XP_008441415.1 PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo])

HSP 1 Score: 149 bits (375), Expect = 5.41e-45
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGL+FSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNAICIFVKL+SG
Sbjct: 61 PLIMLNAICIFVKLISG 77

BLAST of MC04g1889 vs. NCBI nr
Match: XP_022952849.1 (immediate early response 3-interacting protein 1-like [Cucurbita moschata])

HSP 1 Score: 145 bits (367), Expect = 9.00e-44
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLA RGLSFSEFSGGRTKSFKGQLIGL+YATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLARRGLSFSEFSGGRTKSFKGQLIGLVYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNA+CIFVKLVSG
Sbjct: 61 PLIMLNALCIFVKLVSG 77

BLAST of MC04g1889 vs. NCBI nr
Match: XP_022990010.1 (immediate early response 3-interacting protein 1-like [Cucurbita maxima])

HSP 1 Score: 143 bits (361), Expect = 7.41e-43
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLA RGLSFSEFSGGRTKS KGQLIGL+YATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLARRGLSFSEFSGGRTKSLKGQLIGLVYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNA+CIFVKLVSG
Sbjct: 61 PLIMLNALCIFVKLVSG 77

BLAST of MC04g1889 vs. ExPASy TrEMBL
Match: A0A6J1C1M0 (immediate early response 3-interacting protein 1-like OS=Momordica charantia OX=3673 GN=LOC111006591 PE=3 SV=1)

HSP 1 Score: 150 bits (379), Expect = 6.42e-46
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNAICIFVKLVSG
Sbjct: 61 PLIMLNAICIFVKLVSG 77

BLAST of MC04g1889 vs. ExPASy TrEMBL
Match: A0A0A0KBI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009360 PE=3 SV=1)

HSP 1 Score: 149 bits (376), Expect = 1.84e-45
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGL+FSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNAICIFVKLVSG
Sbjct: 61 PLIMLNAICIFVKLVSG 77

BLAST of MC04g1889 vs. ExPASy TrEMBL
Match: A0A1S3B419 (immediate early response 3-interacting protein 1-like OS=Cucumis melo OX=3656 GN=LOC103485539 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 2.62e-45
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLAPRGL+FSEFSGGRTKSFKGQLIGLIYATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLNFSEFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNAICIFVKL+SG
Sbjct: 61 PLIMLNAICIFVKLISG 77

BLAST of MC04g1889 vs. ExPASy TrEMBL
Match: A0A6J1GMX2 (immediate early response 3-interacting protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455413 PE=3 SV=1)

HSP 1 Score: 145 bits (367), Expect = 4.36e-44
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLA RGLSFSEFSGGRTKSFKGQLIGL+YATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLARRGLSFSEFSGGRTKSFKGQLIGLVYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNA+CIFVKLVSG
Sbjct: 61 PLIMLNALCIFVKLVSG 77

BLAST of MC04g1889 vs. ExPASy TrEMBL
Match: A0A6J1JNY1 (immediate early response 3-interacting protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111487030 PE=3 SV=1)

HSP 1 Score: 143 bits (361), Expect = 3.59e-43
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEFSGGRTKSFKGQLIGLIYATQYLRV 60
          MGLWTLLEGCLLLANALAILNEDRFLA RGLSFSEFSGGRTKS KGQLIGL+YATQYLRV
Sbjct: 1  MGLWTLLEGCLLLANALAILNEDRFLARRGLSFSEFSGGRTKSLKGQLIGLVYATQYLRV 60

Query: 61 PLIMLNAICIFVKLVSG 77
          PLIMLNA+CIFVKLVSG
Sbjct: 61 PLIMLNALCIFVKLVSG 77

BLAST of MC04g1889 vs. TAIR 10
Match: AT2G37975.1 (Yos1-like protein )

HSP 1 Score: 90.9 bits (224), Expect = 4.9e-19
Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEF-SGGRTKSFKGQLIGLIYATQYLR 60
          MG WTL+EG LL ANALAILNEDRFLAP+G + +E    G+  S KGQ+IGLI+A  Y+R
Sbjct: 1  MGFWTLMEGLLLFANALAILNEDRFLAPKGWTLAELHQTGKRNSLKGQIIGLIHACHYMR 60

Query: 61 VPLIMLNAICIFVKLVSG 78
          +PL++ N I I  KL SG
Sbjct: 61 LPLMLFNLIVIVFKLFSG 78

BLAST of MC04g1889 vs. TAIR 10
Match: AT3G54085.1 (Yos1-like protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-18
Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEF-SGGRTKSFKGQLIGLIYATQYLR 60
          MG WTLL+G LL ANALAILNEDRFL PRG +  E     R  S KGQ+IGLI+A QY+R
Sbjct: 1  MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQIIGLIHACQYMR 60

Query: 61 VPLIMLNAICIFVKLVSG 78
          +PL+++N   I +KL+SG
Sbjct: 61 LPLMLINTAVIVLKLISG 78

BLAST of MC04g1889 vs. TAIR 10
Match: AT3G54085.2 (Yos1-like protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-18
Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0

Query: 1  MGLWTLLEGCLLLANALAILNEDRFLAPRGLSFSEF-SGGRTKSFKGQLIGLIYATQYLR 60
          MG WTLL+G LL ANALAILNEDRFL PRG +  E     R  S KGQ+IGLI+A QY+R
Sbjct: 1  MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQIIGLIHACQYMR 60

Query: 61 VPLIMLNAICIFVKLVSG 78
          +PL+++N   I +KL+SG
Sbjct: 61 LPLMLINTAVIVLKLISG 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q3B8G73.0e-0539.74Immediate early response 3-interacting protein 1 OS=Xenopus laevis OX=8355 GN=ie... [more]
Q4VBI23.9e-0537.18Immediate early response 3-interacting protein 1 OS=Danio rerio OX=7955 GN=ier3i... [more]
Q1JQC26.6e-0539.74Immediate early response 3-interacting protein 1 OS=Bos taurus OX=9913 GN=IER3IP... [more]
Q9Y5U96.6e-0539.74Immediate early response 3-interacting protein 1 OS=Homo sapiens OX=9606 GN=IER3... [more]
P850071.1e-0438.46Immediate early response 3-interacting protein 1 OS=Rattus norvegicus OX=10116 G... [more]
Match NameE-valueIdentityDescription
XP_022134292.11.33e-45100.00immediate early response 3-interacting protein 1-like [Momordica charantia] >XP_... [more]
XP_031743934.13.81e-4598.70immediate early response 3-interacting protein 1 [Cucumis sativus][more]
XP_008441413.15.41e-4597.40PREDICTED: immediate early response 3-interacting protein 1-like [Cucumis melo] ... [more]
XP_022952849.19.00e-4496.10immediate early response 3-interacting protein 1-like [Cucurbita moschata][more]
XP_022990010.17.41e-4394.81immediate early response 3-interacting protein 1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1C1M06.42e-46100.00immediate early response 3-interacting protein 1-like OS=Momordica charantia OX=... [more]
A0A0A0KBI31.84e-4598.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009360 PE=3 SV=1[more]
A0A1S3B4192.62e-4597.40immediate early response 3-interacting protein 1-like OS=Cucumis melo OX=3656 GN... [more]
A0A6J1GMX24.36e-4496.10immediate early response 3-interacting protein 1-like OS=Cucurbita moschata OX=3... [more]
A0A6J1JNY13.59e-4394.81immediate early response 3-interacting protein 1-like OS=Cucurbita maxima OX=366... [more]
Match NameE-valueIdentityDescription
AT2G37975.14.9e-1960.26Yos1-like protein [more]
AT3G54085.11.1e-1860.26Yos1-like protein [more]
AT3G54085.21.1e-1860.26Yos1-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013880Yos1-likePFAMPF08571Yos1coord: 3..77
e-value: 2.6E-23
score: 82.1
IPR013880Yos1-likePANTHERPTHR15858UNCHARACTERIZEDcoord: 1..77
NoneNo IPR availablePANTHERPTHR15858:SF4YOS1-LIKE PROTEINcoord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g1889.1MC04g1889.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process GO:0015031 protein transport
cellular_component GO:0030134 COPII-coated ER to Golgi transport vesicle
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0030173 integral component of Golgi membrane