
MC04g1887 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.CAAGAAACTGCTACAGATAACTTTGCAATGCTCACAGAGAGGTGAGGCTGATTTGAAAAGGAAAAGAAAAGTTAAAAAAATTGAAAATGGTTTATGTATTGATGAGAATTGAAACCCCATTTTGAGATGTTTTGCTGTATAAAAGTAACGCACACAGTTAAAAGCTTGGTGTTAGTGACATATGGCATAAGGGTCGCACAGAAGGACAAATGTCCCCAACGACTGGCCCTCCCTTTCCAGTTGTCTTCAAATCACTCTCATTTTGAATTTGAACTGTCCCCCAAATGAGCCCTTAATTATAAAGCACAACCTTCTCCTTAACATTCCCCACTCTCCTCCCTTTGCTTTTGGTTTGTAGGGTCCCCCCTCCACCTGCACATCCTCTGCTGCCTCTCATTATTAAATCTTCCTCACGCACCCTCTTCCTTTCCCCAACATCCCCTCTCTCTTTCTATCCCTTTTTCCCACTTCTCTCTCCATTCCCTTCCCATGGCTGAGTCTACACTTGCCTCTAATTTCTGGCTTCCGGCCGGGAAGGAGACTCTCAGCTTCCCCACTGACTTCCCTTACGAGTTTGACTCGCTTGCCTCCAACTTCGACCTCAACTCACCGGTGGAATCCGTTGTCAGCTCCACCGAGTCGACGGACAGCAGCGACGACGACGACTTCTTTGTGGGGCTGGCTCGGCAACTCGCATGGACGTACCTCTGTGAAACTGAGAGCTCCCCCACTCCCTGCTTCAATCCAAACAAATTTGAGGTACCCATTTTGTTGAAATCTTCACTTCTTATCTTTTGGGCGTGTAAATTAGTTTCTGATTTGATTTTGATTTCTGGGCTGCAGAAGAAGTATGTTAAGGCTGGGTCTCCTCAGTCGACGTTGAGTGGAATAGACGCCTGGTTTCGCCCTCATAGTCCGTCTTCTCAGTTGAAATCGCCTCCTATTGCGGTTTTTGGGGCTGAGAACGATGCGAGAGTCCTCGTTCATGCAGCTGCCAGAGAAGCTGCAAGGTTGAAAATGAGCGCCGAAACAACCCCATTTCAGAGCAATGACCCTTTCGTTAGAGGATTTATGGGGGCTCGATCTTCCATTCCAGTTAAATCGACTAGTAATGTGGATTATGGGCTGTTCTCGAATGAGGGCTGTGCTCGGAATCTGGCATTTTCCGCGCAGGTAAATCATTTCAAATCTCCAATCTAAGAACAGAGTATTTTGAACAGTTTGGTCCTCTGTTTTTTCTTTATGGGTTATCTTTCATTTCTGAGGTTTTTGAGATCCCATTGTTTTACAGGTGCAGCAAGTGAGACATGATCTAGTGCTGCAGGCTATTTGTGCCTCTTCTTGGGGTAGACAAGCCAAGGTAGACTGGGCGGCTCCGCCGCACCGGAAGCCGGAGATTCAGAACAGGGAAAGAAACATTGGTCTTGGAGGGGGGAGATGCAGTGGCGCCGCCGGTTTATACCAATCCGCATGGCTCCCGCCGCCCCAAAGTCAGCCGCCACCGCCCAACGCCTCTGCCGTGCGTTGTATTCATCCTGGTGGACCCGCCGTCAAGAGAGCTTCCTCCGGCACCGGCGTTTTCTTGCCTCGCAGATATGTAAATCCCTCGGAATGCCGCCAGAAACAAGGTGCCATTTCACAACCTCTCTTTTGCTCAAATCTCACATGGGGGTTTCTTTGTTGTTTAACTTGATCGTTTAATTTAATTAGGAACCCCAGCCGTTCGATTTCCAGAGGAGATGATAAATCCCATTCAAGCGCCGTTCAATGGCTGCTTATCCCCTGGCTTCGGTAAGCAGAGTTTTCCCCTGTTTTTCCATTTAGCCCCCAAATCTGTGCTTATTTTGATGGGTTTCTTTAATGGGTATAGATGCCATGTTAGCTCGGAGGAATACTTCCCTTTTGCCACTGCCAAGGAGCTTGCGGGGAGAGGCAGCCATAAACCAAGAACTTCATCTCCCTCAAGAATGGACATACTGAAATCAAAAAGTTTGTTTTAGGGTTTGAACAGGGAGAAGCCATTAAAGTAGCAGTAGAGAAGTATTGATTCATGAAGAAGAAGAAGAAGATGATGGGATTGAAAAAAAGGAGTTGTTAGTTTTAGGAGGCAGCAATAAGTAACCAGGAAGTTGTTATTTATTGAAGGATGTCGCAGCTTTAGAATAAAGAAACACTGAAAGTTGTAGAAGTAGTGTGGGAAGAATTGAAGCTTGAAGAAGAACTAAAGGACAGGGAATGGTCTGTGTCCTTGTAATAAAATCTGTAATTTTGTGTTATATTGAGATTTTAGAGATATGTTTTTTTGGGTGAGGGGAAAAATGTAAAATTCCTCTGGCTTGTAGTTTTGTTGAAGGATATGCTTTAATAAATAATAACATATATGTTGCCTTTTGTTATTTTCTCTTCCAC CAAGAAACTGCTACAGATAACTTTGCAATGCTCACAGAGAGGTGAGGCTGATTTGAAAAGGAAAAGAAAAGTTAAAAAAATTGAAAATGGTTTATGTATTGATGAGAATTGAAACCCCATTTTGAGATGTTTTGCTGTATAAAAGTAACGCACACAGTTAAAAGCTTGGTGTTAGTGACATATGGCATAAGGGTCGCACAGAAGGACAAATGTCCCCAACGACTGGCCCTCCCTTTCCAGTTGTCTTCAAATCACTCTCATTTTGAATTTGAACTGTCCCCCAAATGAGCCCTTAATTATAAAGCACAACCTTCTCCTTAACATTCCCCACTCTCCTCCCTTTGCTTTTGGTTTGTAGGGTCCCCCCTCCACCTGCACATCCTCTGCTGCCTCTCATTATTAAATCTTCCTCACGCACCCTCTTCCTTTCCCCAACATCCCCTCTCTCTTTCTATCCCTTTTTCCCACTTCTCTCTCCATTCCCTTCCCATGGCTGAGTCTACACTTGCCTCTAATTTCTGGCTTCCGGCCGGGAAGGAGACTCTCAGCTTCCCCACTGACTTCCCTTACGAGTTTGACTCGCTTGCCTCCAACTTCGACCTCAACTCACCGGTGGAATCCGTTGTCAGCTCCACCGAGTCGACGGACAGCAGCGACGACGACGACTTCTTTGTGGGGCTGGCTCGGCAACTCGCATGGACGTACCTCTGTGAAACTGAGAGCTCCCCCACTCCCTGCTTCAATCCAAACAAATTTGAGAAGAAGTATGTTAAGGCTGGGTCTCCTCAGTCGACGTTGAGTGGAATAGACGCCTGGTTTCGCCCTCATAGTCCGTCTTCTCAGTTGAAATCGCCTCCTATTGCGGTTTTTGGGGCTGAGAACGATGCGAGAGTCCTCGTTCATGCAGCTGCCAGAGAAGCTGCAAGGTTGAAAATGAGCGCCGAAACAACCCCATTTCAGAGCAATGACCCTTTCGTTAGAGGATTTATGGGGGCTCGATCTTCCATTCCAGTTAAATCGACTAGTAATGTGGATTATGGGCTGTTCTCGAATGAGGGCTGTGCTCGGAATCTGGCATTTTCCGCGCAGGTGCAGCAAGTGAGACATGATCTAGTGCTGCAGGCTATTTGTGCCTCTTCTTGGGGTAGACAAGCCAAGGTAGACTGGGCGGCTCCGCCGCACCGGAAGCCGGAGATTCAGAACAGGGAAAGAAACATTGGTCTTGGAGGGGGGAGATGCAGTGGCGCCGCCGGTTTATACCAATCCGCATGGCTCCCGCCGCCCCAAAGTCAGCCGCCACCGCCCAACGCCTCTGCCGTGCGTTGTATTCATCCTGGTGGACCCGCCGTCAAGAGAGCTTCCTCCGGCACCGGCGTTTTCTTGCCTCGCAGATATGTAAATCCCTCGGAATGCCGCCAGAAACAAGGAACCCCAGCCGTTCGATTTCCAGAGGAGATGATAAATCCCATTCAAGCGCCGTTCAATGGCTGCTTATCCCCTGGCTTCGATGCCATGTTAGCTCGGAGGAATACTTCCCTTTTGCCACTGCCAAGGAGCTTGCGGGGAGAGGCAGCCATAAACCAAGAACTTCATCTCCCTCAAGAATGGACATACTGAAATCAAAAAGTTTGTTTTAGGGTTTGAACAGGGAGAAGCCATTAAAGTAGCAGTAGAGAAGTATTGATTCATGAAGAAGAAGAAGAAGATGATGGGATTGAAAAAAAGGAGTTGTTAGTTTTAGGAGGCAGCAATAAGTAACCAGGAAGTTGTTATTTATTGAAGGATGTCGCAGCTTTAGAATAAAGAAACACTGAAAGTTGTAGAAGTAGTGTGGGAAGAATTGAAGCTTGAAGAAGAACTAAAGGACAGGGAATGGTCTGTGTCCTTGTAATAAAATCTGTAATTTTGTGTTATATTGAGATTTTAGAGATATGTTTTTTTGGGTGAGGGGAAAAATGTAAAATTCCTCTGGCTTGTAGTTTTGTTGAAGGATATGCTTTAATAAATAATAACATATATGTTGCCTTTTGTTATTTTCTCTTCCAC ATGGCTGAGTCTACACTTGCCTCTAATTTCTGGCTTCCGGCCGGGAAGGAGACTCTCAGCTTCCCCACTGACTTCCCTTACGAGTTTGACTCGCTTGCCTCCAACTTCGACCTCAACTCACCGGTGGAATCCGTTGTCAGCTCCACCGAGTCGACGGACAGCAGCGACGACGACGACTTCTTTGTGGGGCTGGCTCGGCAACTCGCATGGACGTACCTCTGTGAAACTGAGAGCTCCCCCACTCCCTGCTTCAATCCAAACAAATTTGAGAAGAAGTATGTTAAGGCTGGGTCTCCTCAGTCGACGTTGAGTGGAATAGACGCCTGGTTTCGCCCTCATAGTCCGTCTTCTCAGTTGAAATCGCCTCCTATTGCGGTTTTTGGGGCTGAGAACGATGCGAGAGTCCTCGTTCATGCAGCTGCCAGAGAAGCTGCAAGGTTGAAAATGAGCGCCGAAACAACCCCATTTCAGAGCAATGACCCTTTCGTTAGAGGATTTATGGGGGCTCGATCTTCCATTCCAGTTAAATCGACTAGTAATGTGGATTATGGGCTGTTCTCGAATGAGGGCTGTGCTCGGAATCTGGCATTTTCCGCGCAGGTGCAGCAAGTGAGACATGATCTAGTGCTGCAGGCTATTTGTGCCTCTTCTTGGGGTAGACAAGCCAAGGTAGACTGGGCGGCTCCGCCGCACCGGAAGCCGGAGATTCAGAACAGGGAAAGAAACATTGGTCTTGGAGGGGGGAGATGCAGTGGCGCCGCCGGTTTATACCAATCCGCATGGCTCCCGCCGCCCCAAAGTCAGCCGCCACCGCCCAACGCCTCTGCCGTGCGTTGTATTCATCCTGGTGGACCCGCCGTCAAGAGAGCTTCCTCCGGCACCGGCGTTTTCTTGCCTCGCAGATATGTAAATCCCTCGGAATGCCGCCAGAAACAAGGAACCCCAGCCGTTCGATTTCCAGAGGAGATGATAAATCCCATTCAAGCGCCGTTCAATGGCTGCTTATCCCCTGGCTTCGATGCCATGTTAGCTCGGAGGAATACTTCCCTTTTGCCACTGCCAAGGAGCTTGCGGGGAGAGGCAGCCATAAACCAAGAACTTCATCTCCCTCAAGAATGGACATACTGA MAESTLASNFWLPAGKETLSFPTDFPYEFDSLASNFDLNSPVESVVSSTESTDSSDDDDFFVGLARQLAWTYLCETESSPTPCFNPNKFEKKYVKAGSPQSTLSGIDAWFRPHSPSSQLKSPPIAVFGAENDARVLVHAAAREAARLKMSAETTPFQSNDPFVRGFMGARSSIPVKSTSNVDYGLFSNEGCARNLAFSAQVQQVRHDLVLQAICASSWGRQAKVDWAAPPHRKPEIQNRERNIGLGGGRCSGAAGLYQSAWLPPPQSQPPPPNASAVRCIHPGGPAVKRASSGTGVFLPRRYVNPSECRQKQGTPAVRFPEEMINPIQAPFNGCLSPGFDAMLARRNTSLLPLPRSLRGEAAINQELHLPQEWTY Homology
BLAST of MC04g1887 vs. NCBI nr
Match: XP_022134429.1 (uncharacterized protein LOC111006679 [Momordica charantia]) HSP 1 Score: 765 bits (1976), Expect = 3.00e-279 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of MC04g1887 vs. NCBI nr
Match: XP_038884388.1 (uncharacterized protein LOC120075245 isoform X1 [Benincasa hispida]) HSP 1 Score: 545 bits (1404), Expect = 3.05e-192 Identity = 274/363 (75.48%), Postives = 308/363 (84.85%), Query Frame = 0
BLAST of MC04g1887 vs. NCBI nr
Match: XP_038884389.1 (uncharacterized protein LOC120075245 isoform X2 [Benincasa hispida]) HSP 1 Score: 538 bits (1387), Expect = 1.14e-189 Identity = 273/363 (75.21%), Postives = 307/363 (84.57%), Query Frame = 0
BLAST of MC04g1887 vs. NCBI nr
Match: XP_023515357.1 (uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 535 bits (1377), Expect = 6.27e-188 Identity = 277/389 (71.21%), Postives = 312/389 (80.21%), Query Frame = 0
BLAST of MC04g1887 vs. NCBI nr
Match: XP_022957513.1 (uncharacterized protein LOC111458886 [Cucurbita moschata]) HSP 1 Score: 525 bits (1353), Expect = 2.80e-184 Identity = 273/389 (70.18%), Postives = 308/389 (79.18%), Query Frame = 0
BLAST of MC04g1887 vs. ExPASy TrEMBL
Match: A0A6J1BYQ6 (uncharacterized protein LOC111006679 OS=Momordica charantia OX=3673 GN=LOC111006679 PE=4 SV=1) HSP 1 Score: 765 bits (1976), Expect = 1.45e-279 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of MC04g1887 vs. ExPASy TrEMBL
Match: A0A6J1H0F4 (uncharacterized protein LOC111458886 OS=Cucurbita moschata OX=3662 GN=LOC111458886 PE=4 SV=1) HSP 1 Score: 525 bits (1353), Expect = 1.36e-184 Identity = 273/389 (70.18%), Postives = 308/389 (79.18%), Query Frame = 0
BLAST of MC04g1887 vs. ExPASy TrEMBL
Match: A0A5A7TJ83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001390 PE=4 SV=1) HSP 1 Score: 515 bits (1326), Expect = 8.15e-181 Identity = 268/364 (73.63%), Postives = 299/364 (82.14%), Query Frame = 0
BLAST of MC04g1887 vs. ExPASy TrEMBL
Match: A0A1S3B425 (uncharacterized protein LOC103485542 OS=Cucumis melo OX=3656 GN=LOC103485542 PE=4 SV=1) HSP 1 Score: 515 bits (1326), Expect = 8.15e-181 Identity = 268/364 (73.63%), Postives = 299/364 (82.14%), Query Frame = 0
BLAST of MC04g1887 vs. ExPASy TrEMBL
Match: A0A6J1JLQ9 (uncharacterized protein LOC111487028 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487028 PE=4 SV=1) HSP 1 Score: 511 bits (1315), Expect = 8.77e-179 Identity = 272/391 (69.57%), Postives = 304/391 (77.75%), Query Frame = 0
BLAST of MC04g1887 vs. TAIR 10
Match: AT2G39870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55690.1); Has 73 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 99.0 bits (245), Expect = 8.7e-21 Identity = 109/385 (28.31%), Postives = 161/385 (41.82%), Query Frame = 0
BLAST of MC04g1887 vs. TAIR 10
Match: AT3G55690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39870.1); Has 76 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 3; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 84.0 bits (206), Expect = 2.9e-16 Identity = 99/360 (27.50%), Postives = 143/360 (39.72%), Query Frame = 0
BLAST of MC04g1887 vs. TAIR 10
Match: AT5G59050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 3.2e-07 Identity = 46/168 (27.38%), Postives = 72/168 (42.86%), Query Frame = 0
BLAST of MC04g1887 vs. TAIR 10
Match: AT3G54000.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802); Has 94 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 9.3e-07 Identity = 59/239 (24.69%), Postives = 94/239 (39.33%), Query Frame = 0
BLAST of MC04g1887 vs. TAIR 10
Match: AT3G54000.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 6.7e-05 Identity = 45/169 (26.63%), Postives = 72/169 (42.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|