MC04g1877 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1877
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	GATA type zinc finger transcription factor family protein
Location	MC04: 25911672 .. 25914197 (+)
RNA-Seq Expression	MC04g1877
Synteny	MC04g1877

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCTCATCTCCCCTTTATCTTTTTCATTAAATTATTTCTAATGCGTTGTAATCACAGACACTAAAGAATAAATCTTCTTTTCAATTCTATTTTTGTAACAATTCTTTGTCCCAAATTCGAACATAAAACTTCCACTACCCTGCGGCAAAAGGGGGTCCAATCCGATCCCCTTTGATTTTCTCCTCTATATTTCTCCCCTCTCCGGCCGCCCCTTCTTCCCCCCTCGAGTTTTCTGAGGCTAACGCTTTTGGGGTTCATTAATTTGGCTCTGTTCTTCGCAGATCCACCATTTCTACAGCCCCTAATCTCAGGTATGCGATTTTATCTCAATTTTGTTTCACATTTCCCAGCTCTCACATCCCAGATCATGATTGTTTTTTTTTCTTAAGATCTTTGTCGCCTTCTTCCATTGTTAAACAGTCTGATTTCTGGGTTTATTGGAATGAGATTCATGTTTGTTCATTGTAATTTTGTATTCCAGTTATGGATGGGTGATGGAAGTTTAATGTTAATCTCTCTCTGATGATTTGAGGGGCATCTATTTTTTATCTAACAGGACAGAGAGGGGAAGTTAGGCGCGAGGGTTGGGTGGAAAAGGGGTCGGATCTAATTCCAAGGGCTTAGCTATGTCTTTCACTGGCACACTAATAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCCGATGGAGTTATCTATCATAAGTCTTGCTTCAAATGCACCCATTGCAAAGGAACTCTAAAGGTATATTGCACTTTGTTTATAAGATTTCTTAATCACCTCTAATCTCAAAAGTTTATGTTGAGAAGCTATGGTGCATTTTATTGTTTTATATGTATTCTTAACATGAGATCCGACGAGTGACTATTATATTAATTTGGAAGGAAGGAGATGACGTTATTGGAGTTTGAGTTCAGAAGCTCTGATACCGTATTAAATTACCACTTAATCCAAAAACACTTAAGTTGATAAGTTATGGTCTATTTAATTATTTATACTGTATTCTTAACAAAGATACATCTATCTTGAGTTTTTGCTTTCTGCCCAATTTACAGGGAATATAATGTATCTTGCCAAACTATTTGTAAAGGATGTTTAAAATTTGGTATCAACTTGTGTCTCAAGTGTCCATCTGCTGGTATATCACAAGTAAACACAACAAAGTATAGGAGTTACATCAAAGGTTTCAAATTATGGTTACAATTGGGACATGGCAATTAAACAATAAATAGGAGCTAAAAAATCTAATTTAACGACTTTCGGTCTTGTACCGGATGATTGCGAGTTTTTCTGGAAGGATTGGAAGGTTGTTTTTGTTATGAAGATTGGAATCTATCTTACTGTTTGACCTTGTTCTTTGCTTGCCTTCAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTGTACTGCAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACAGGAAACTTCAACAAGAACTTCCAATCACGTACGTTCTTGTCTTCTTTCCGGAAAACTTGATGTTTCACTTCACAAAAATTTTGCTTTATGTTTAATTGTTTTTGAGTTTTGTTTTCAACAGCTGCAAAGTCAGCCGACAAGTTAACCCCAGAGCTGGTAATTTCCTGCTGTAATTTGTTATGATTCGATCTTGAGGAGATTTCTCCACAAGGACATAAAATTATGCTGTGTATTGCAACTGATTCTTGTAACCAATAATTGGTTTCAGACTAGATCACCTAGCAAAGCTGCTGGCATGTTTTCTGGGACTCAAGACAAATGTACTACTTGTGGTAAAACTGTTTATCCACTGGAGAAGGTAAACCACTTAGTGAGATCTTGACAAATAACAAATTTTTGCTCGATGGATATATTTGAAACGGTTATGAAAGTTCAAGGATAGTATTGAAACTTTTGAAAGGATAGAGGTATTTTAGATATCAGTTTTGGCGTGCGCTACCATTTTTCCAACAACCCCACATCAAAAGAGAAAAAAAAATGCATCAAATCCATGGCTATTGATTCATAAATTTGATATTTGCAAAGTTTGTAGAGCATTTTAGACGAATTCGTTATTACAAATACTTGCAGGTAACAGTTGAAAGCCAATGCTTTCACAAGTGCTGTTTCAAGTGCTCTCATGGAGGGTGTGCTATATCCCCATCAAATTATGCAGCTCTAGAGGGTATTCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTACCGCTGCCTCCGTTCCCGAAGCTTGAAGTTCTAATCCTTGCATCATCATTATTCACGGTTTCGGGCCTAACTCTCTATATACCTAATGTGTTTAACTTAAAAATTTATGGTTTTGAGATGGGAAGAGGGAAAGGAAAAATTTATATATATATATTTACCATCATTTCGGCTTGTGTGTTTGTTTGGGCCAAACTGTTGCTTTTGATCGATATTTGAGGTGGAAACTTTATATATGGTTTACAGAACTTGC

mRNA sequence

CAACCTCATCTCCCCTTTATCTTTTTCATTAAATTATTTCTAATGCGTTGTAATCACAGACACTAAAGAATAAATCTTCTTTTCAATTCTATTTTTGTAACAATTCTTTGTCCCAAATTCGAACATAAAACTTCCACTACCCTGCGGCAAAAGGGGGTCCAATCCGATCCCCTTTGATTTTCTCCTCTATATTTCTCCCCTCTCCGGCCGCCCCTTCTTCCCCCCTCGAGTTTTCTGAGGCTAACGCTTTTGGGGTTCATTAATTTGGCTCTGTTCTTCGCAGATCCACCATTTCTACAGCCCCTAATCTCAGGACAGAGAGGGGAAGTTAGGCGCGAGGGTTGGGTGGAAAAGGGGTCGGATCTAATTCCAAGGGCTTAGCTATGTCTTTCACTGGCACACTAATAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCCGATGGAGTTATCTATCATAAGTCTTGCTTCAAATGCACCCATTGCAAAGGAACTCTAAAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTGTACTGCAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACAGGAAACTTCAACAAGAACTTCCAATCACCTGCAAAGTCAGCCGACAAGTTAACCCCAGAGCTGACTAGATCACCTAGCAAAGCTGCTGGCATGTTTTCTGGGACTCAAGACAAATGTACTACTTGTGGTAAAACTGTTTATCCACTGGAGAAGGTAACAGTTGAAAGCCAATGCTTTCACAAGTGCTGTTTCAAGTGCTCTCATGGAGGGTGTGCTATATCCCCATCAAATTATGCAGCTCTAGAGGGTATTCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTACCGCTGCCTCCGTTCCCGAAGCTTGAAGTTCTAATCCTTGCATCATCATTATTCACGGTTTCGGGCCTAACTCTCTATATACCTAATGTGTTTAACTTAAAAATTTATGGTTTTGAGATGGGAAGAGGGAAAGGAAAAATTTATATATATATATTTACCATCATTTCGGCTTGTGTGTTTGTTTGGGCCAAACTGTTGCTTTTGATCGATATTTGAGGTGGAAACTTTATATATGGTTTACAGAACTTGC

Coding sequence (CDS)

ATGTCTTTCACTGGCACACTAATAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCCGATGGAGTTATCTATCATAAGTCTTGCTTCAAATGCACCCATTGCAAAGGAACTCTAAAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTGTACTGCAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACAGGAAACTTCAACAAGAACTTCCAATCACCTGCAAAGTCAGCCGACAAGTTAACCCCAGAGCTGACTAGATCACCTAGCAAAGCTGCTGGCATGTTTTCTGGGACTCAAGACAAATGTACTACTTGTGGTAAAACTGTTTATCCACTGGAGAAGGTAACAGTTGAAAGCCAATGCTTTCACAAGTGCTGTTTCAAGTGCTCTCATGGAGGGTGTGCTATATCCCCATCAAATTATGCAGCTCTAGAGGGTATTCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTACCGCTGCCTCCGTTCCCGAAGCTTGA

Protein sequence

MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKPHFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEKVTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRTAASVPEA

Homology

[Close]

BLAST of MC04g1877 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.0e-91
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of MC04g1877 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.8e-89
Identity = 152/190 (80.00%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KC+ACEKTVYPVE LSADG+ YHK+CFKC+HCK  L+LSNYSSMEGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKS-ADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLE 120
           HFEQLFKE+G+F+KNFQSPAK   DK TPEL R+PS+ AGMFSGTQDKC TC KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASM 180
           KVTVESQC+HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KRTAASVPEA 190
           KR  A+   A
Sbjct: 181 KRATAAATAA 190

[Close]

BLAST of MC04g1877 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.1e-72
Identity = 119/184 (64.67%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTL KC  C+KTVY V+ LS +G+ YHKSCF+CTHCKGTL++SNYSSM+GVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+GNF+KNFQ P K+     PELTR+PSK + +F GTQDKC  C KTVYPLEK
Sbjct: 61  HFEQLFKESGNFSKNFQ-PGKTE---KPELTRTPSKISSIFCGTQDKCAACEKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           + +E +CFHK CF+C+HGGC ++ S+YA+L+ +LYC+HHF+QLF EKG+Y H++++A+ +
Sbjct: 121 IQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHR 180

Query: 181 RTAA 185
           RTA+
Sbjct: 181 RTAS 180

[Close]

BLAST of MC04g1877 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.0e-70
Identity = 121/185 (65.41%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTL KCKAC+KTVY ++ L+ +G  YHKSCF+CTHCKGTL +SNYSSM+GVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+GN++KNFQ  A   +K    LTR+PSK +  FSGTQDKC TC KTVYPLEK
Sbjct: 61  HFEQLFKESGNYSKNFQ--AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VT+E + +HK CF+C+H GC ++ S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+  
Sbjct: 121 VTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANH 180

Query: 181 RTAAS 186
           R +AS
Sbjct: 181 RRSAS 183

[Close]

BLAST of MC04g1877 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.1e-67
Identity = 120/189 (63.49%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KC AC+KTV+ ++ L+ADGV YHK+CFKC+HCKG L + +YSSM+GVLYCK 
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETG+F+K F    +S DK   EL R+PSK    FSGTQDKC  C KTVYPLEK
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDK---ELARAPSKICSAFSGTQDKCAACQKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSASM 180
           +T+E + +HK CFKCSHGGC ++ S+YAAL G+LYCK HF QLF EKGSYNH+  KS S 
Sbjct: 121 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQ 180

Query: 181 KRTAASVPE 189
           +     VPE
Sbjct: 181 EVLPEVVPE 186

[Close]

BLAST of MC04g1877 vs. NCBI nr
Match: XP_022134482.1 (LIM domain-containing protein WLIM2b-like [Momordica charantia])

HSP 1 Score: 399 bits (1026), Expect = 1.12e-140
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           RTAASVPEA
Sbjct: 181 RTAASVPEA 189

[Close]

BLAST of MC04g1877 vs. NCBI nr
Match: XP_038884117.1 (LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM domain-containing protein WLIM2b [Benincasa hispida])

HSP 1 Score: 374 bits (961), Expect = 9.18e-131
Identity = 177/189 (93.65%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVYPVEQLSADG+ YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPVEQLSADGISYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of MC04g1877 vs. NCBI nr
Match: XP_004138434.1 (LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_008441431.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_011656401.1 LIM domain-containing protein WLIM2b [Cucumis sativus] >KGN45769.1 hypothetical protein Csa_005194 [Cucumis sativus])

HSP 1 Score: 372 bits (954), Expect = 1.07e-129
Identity = 176/189 (93.12%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of MC04g1877 vs. NCBI nr
Match: XP_010067487.1 (LIM domain-containing protein WLIM2b [Eucalyptus grandis] >XP_010067488.1 LIM domain-containing protein WLIM2b [Eucalyptus grandis] >XP_010067489.1 LIM domain-containing protein WLIM2b [Eucalyptus grandis] >KCW65631.1 hypothetical protein EUGRSUZ_G03023 [Eucalyptus grandis])

HSP 1 Score: 372 bits (954), Expect = 1.07e-129
Identity = 174/189 (92.06%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT +KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQVKCKACEKTVYPVEQLSADGVAYHKSCFKCSHCKGTLKLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSADKLTPEL RSPSKAAGMFSGTQDKC TCGKT YPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELARSPSKAAGMFSGTQDKCATCGKTAYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC I+PSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           R AAS+PEA
Sbjct: 181 RAAASIPEA 189

[Close]

BLAST of MC04g1877 vs. NCBI nr
Match: XP_023550254.1 (LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371 bits (952), Expect = 2.17e-129
Identity = 176/189 (93.12%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLS DGV YHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           R AASVPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of MC04g1877 vs. ExPASy TrEMBL
Match: A0A6J1BZQ6 (LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC111006716 PE=4 SV=1)

HSP 1 Score: 399 bits (1026), Expect = 5.43e-141
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           RTAASVPEA
Sbjct: 181 RTAASVPEA 189

[Close]

BLAST of MC04g1877 vs. ExPASy TrEMBL
Match: A0A1S3B3E4 (LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=4 SV=1)

HSP 1 Score: 372 bits (954), Expect = 5.19e-130
Identity = 176/189 (93.12%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of MC04g1877 vs. ExPASy TrEMBL
Match: A0A059BIA9 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G03023 PE=4 SV=1)

HSP 1 Score: 372 bits (954), Expect = 5.19e-130
Identity = 174/189 (92.06%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT +KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQVKCKACEKTVYPVEQLSADGVAYHKSCFKCSHCKGTLKLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSADKLTPEL RSPSKAAGMFSGTQDKC TCGKT YPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELARSPSKAAGMFSGTQDKCATCGKTAYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC I+PSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           R AAS+PEA
Sbjct: 181 RAAASIPEA 189

[Close]

BLAST of MC04g1877 vs. ExPASy TrEMBL
Match: A0A0A0KAA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1)

HSP 1 Score: 372 bits (954), Expect = 5.19e-130
Identity = 176/189 (93.12%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of MC04g1877 vs. ExPASy TrEMBL
Match: A0A6J1K140 (LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197 PE=4 SV=1)

HSP 1 Score: 369 bits (948), Expect = 4.27e-129
Identity = 175/189 (92.59%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLS DGV YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 189
           R AASVPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of MC04g1877 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of MC04g1877 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of MC04g1877 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of MC04g1877 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of MC04g1877 vs. TAIR 10
Match: AT3G55770.5 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

The following BLAST results are available for this feature:

BLAST of MC04g1877 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M047	1.0e-91	83.60	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	2.8e-89	80.00	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q1ECF5	4.1e-72	64.67	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	1.0e-70	65.41	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q7F9R9	5.1e-67	63.49	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of MC04g1877 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134482.1	1.12e-140	100.00	LIM domain-containing protein WLIM2b-like [Momordica charantia]	[more]
XP_038884117.1	9.18e-131	93.65	LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM dom...	[more]
XP_004138434.1	1.07e-129	93.12	LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED...	[more]
XP_010067487.1	1.07e-129	92.06	LIM domain-containing protein WLIM2b [Eucalyptus grandis] >XP_010067488.1 LIM do...	[more]
XP_023550254.1	2.17e-129	93.12	LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC04g1877 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZQ6	5.43e-141	100.00	LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A1S3B3E4	5.19e-130	93.12	LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=...	[more]
A0A059BIA9	5.19e-130	92.06	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G03023 PE=4 SV...	[more]
A0A0A0KAA4	5.19e-130	93.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1	[more]
A0A6J1K140	4.27e-129	92.59	LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197...	[more]

BLAST of MC04g1877 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55770.1	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.5	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 8.5E-13 score: 58.5 coord: 107..159 e-value: 5.7E-8 score: 42.5
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 108..163 e-value: 4.4E-8 score: 33.2 coord: 10..65 e-value: 1.0E-11 score: 44.8
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.4542
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 106..166 score: 11.8009
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 102..172 e-value: 2.2E-17 score: 65.0 coord: 8..74 e-value: 1.6E-20 score: 75.0
None	No IPR available	PANTHER	PTHR24206:SF94	LIM DOMAIN-CONTAINING PROTEIN WLIM2B	coord: 1..189
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..189
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 1.72749E-39 score: 127.196
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 5..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 134..173
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 100..133
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1877.1	MC04g1877.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding