MC04g1831 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1831
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	LOB domain-containing protein 15-like
Location	MC04: 25556187 .. 25557753 (+)
RNA-Seq Expression	MC04g1831
Synteny	MC04g1831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGATGAAGAGAGAAACAGAAGTTTTATGCAGTGGTAATAACTATAGGCATATTTTGAGCAGTAATGGAGGAAGGCTGAATACAATAACGCCATGCGCAGCTTGTAAGCTTCTGAGAAGAAGGTGTGCTCAAGAATGTCCATTTTCTCCATATTTCTCTCCACATGAACCCCACAAATTTGCTTCTGTCCACAAGGTTTTTGGTGCCAGCAATGTCGCTAAGATGCTCATGGTAATTAATTCTAAACCCTAATCTCATAACTTTTCCTTTCATTTTCAGTTCGTATTAGTCATATGGAAAAAAGAGAAAAGAAAAAATTTTACATTTTTCTACTGTGTACTTCAGATCCACTCTCTATTAAATTAATGGAAATTAATAGATCTGACTTTGGTTTTTGCTGTATCAGTTAAGAATATTATTTTACTGTGCTACGGACTATATACACTGATTTCATATCAATTTTTGTTCAGGTAAATTGACAAATTTCAAATCTGAAGTTTGATGATAATAGTTTGTCTTTAATTTTCTGCTTCCAAAAATATTTTTGTTTTTTTTTTAACCACACATCATTCATACTTGTGAGAAACTTTCATAAACTTTTTTTTCACCAAAAACATATTTGAATTCTTTGTTAATGATCTTCTATGGAAATTAGATAATGCAAACCTAACAATTTATAGCGAATTGATTTTGAGATTGAATCCTATAAATTATTAATACTTTTAGCCTAATTTTGAAAATTTTATTGTTTTTTAGTTTTCAAAATTTGGTTTGAATTTTGAAAATATTTTTTAAAAATTAGATTATAAAATAGTTATCAAGTTAAACCAATTTAGAAGTGTGATGAGTCATTTTAACTTTTAATTTTATATCTAATAAATTTTGTCATGAGCCGGTCGATCTAAGTACACTTATATAAAGATGTTTATTTAAGAATGACGTAGGTTAAAAATGAATAAACCACCATTCAATCGATAAGCTTAAGTAAATTTAATTGAATATTATCTCAAATTAATTTCGAACAAATTTAAGTCAAAGTAAACAGTTTATATAATTAAATTTAACCTTTTTAATTTGTTTGTTTTGTTTTGGTGTAGAAAGGGAAGAATATTAATTCTGTTTGTTTGGTGGTGGAAATTTTCAGGAGGTACCAGAGAGTCAAAGAGCCGACGCGGCAAACAGCCTGGTTTATGAAGCCAATCTGAGGCTGAGAGATCCAGTCTACGGCTGCATGGGCGCCATTTCAGCTCTTCAGCACCAACTCCAAACTTTACAAGCTGACCTCAATTCGATAAGATCTGAGATTTTGAAGTACAAGTATAGAGATGCTATTATTCCCTCTTCTTCTTCCTCTCCACACATCGCTTTGATTTCGGGCGCCGCCGGAGTCGTCGTTTCCACCACCGCAACCCCGCCTGCAGCACCCCCGACTCCCCCACATTCTCAGCCGCCTCCACTTTCTCTTCCGCCGCCTCCTCCGTCCTCCTCCGCGATCTATTCCTCGCCAATCAGTAGTGCTGCCCCTGAATTTAACACCATCTCGGCTGAACATATTTCCTACTTT

mRNA sequence

AAGAAGATGAAGAGAGAAACAGAAGTTTTATGCAGTGGTAATAACTATAGGCATATTTTGAGCAGTAATGGAGGAAGGCTGAATACAATAACGCCATGCGCAGCTTGTAAGCTTCTGAGAAGAAGGTGTGCTCAAGAATGTCCATTTTCTCCATATTTCTCTCCACATGAACCCCACAAATTTGCTTCTGTCCACAAGGTTTTTGGTGCCAGCAATGTCGCTAAGATGCTCATGGAGGTACCAGAGAGTCAAAGAGCCGACGCGGCAAACAGCCTGGTTTATGAAGCCAATCTGAGGCTGAGAGATCCAGTCTACGGCTGCATGGGCGCCATTTCAGCTCTTCAGCACCAACTCCAAACTTTACAAGCTGACCTCAATTCGATAAGATCTGAGATTTTGAAGTACAAGTATAGAGATGCTATTATTCCCTCTTCTTCTTCCTCTCCACACATCGCTTTGATTTCGGGCGCCGCCGGAGTCGTCGTTTCCACCACCGCAACCCCGCCTGCAGCACCCCCGACTCCCCCACATTCTCAGCCGCCTCCACTTTCTCTTCCGCCGCCTCCTCCGTCCTCCTCCGCGATCTATTCCTCGCCAATCAGTAGTGCTGCCCCTGAATTTAACACCATCTCGGCTGAACATATTTCCTACTTT

Coding sequence (CDS)

AAGAAGATGAAGAGAGAAACAGAAGTTTTATGCAGTGGTAATAACTATAGGCATATTTTGAGCAGTAATGGAGGAAGGCTGAATACAATAACGCCATGCGCAGCTTGTAAGCTTCTGAGAAGAAGGTGTGCTCAAGAATGTCCATTTTCTCCATATTTCTCTCCACATGAACCCCACAAATTTGCTTCTGTCCACAAGGTTTTTGGTGCCAGCAATGTCGCTAAGATGCTCATGGAGGTACCAGAGAGTCAAAGAGCCGACGCGGCAAACAGCCTGGTTTATGAAGCCAATCTGAGGCTGAGAGATCCAGTCTACGGCTGCATGGGCGCCATTTCAGCTCTTCAGCACCAACTCCAAACTTTACAAGCTGACCTCAATTCGATAAGATCTGAGATTTTGAAGTACAAGTATAGAGATGCTATTATTCCCTCTTCTTCTTCCTCTCCACACATCGCTTTGATTTCGGGCGCCGCCGGAGTCGTCGTTTCCACCACCGCAACCCCGCCTGCAGCACCCCCGACTCCCCCACATTCTCAGCCGCCTCCACTTTCTCTTCCGCCGCCTCCTCCGTCCTCCTCCGCGATCTATTCCTCGCCAATCAGTAGTGCTGCCCCTGAATTTAACACCATCTCGGCTGAACATATTTCCTACTTT

Protein sequence

KKMKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYKYRDAIIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPLSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF

Homology

[Close]

BLAST of MC04g1831 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-58
Identity = 139/223 (62.33%), Postives = 162/223 (72.65%), Query Frame = 0


Query: 1   KKMKRETEVL-CSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH 60
           KK+KRE +         R  +S   G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPH
Sbjct: 13  KKIKREADAWPHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH 72

Query: 61  KFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQ 120
           KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGAISALQ Q+Q
Sbjct: 73  KFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQ 132

Query: 121 TLQADLNSIRSEILKYKYRDA----IIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTP 180
            LQA+L ++RSEILKYK R+A    I+PS+S    +A    + G  VS  A PP  P TP
Sbjct: 133 ALQAELTAVRSEILKYKQREAVATLIVPSNS---QVAGFHNSGG--VSVIAPPPQRPTTP 192

Query: 181 PHSQPPPLSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF 219
           P     P +  PP P SS ++S P ++   E+  I +E+ +YF
Sbjct: 193 PQ----PTTAHPPSP-SSCVFSQP-TTRDLEYGNIESEN-NYF 223

[Close]

BLAST of MC04g1831 vs. ExPASy Swiss-Prot
Match: Q9AT61 (LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-53
Identity = 123/232 (53.02%), Postives = 160/232 (68.97%), Query Frame = 0


Query: 17  RHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 76
           RH+    G  LNT+TPCAACKLLRRRCA+ECPFSPYFSPHEPHKFA+VHKVFGASNV+KM
Sbjct: 37  RHVAVPPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKM 96

Query: 77  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYK 136
           L+EV ESQR DAANSLVYEANLRLRDP+YGCMGAISALQH +Q+LQ++L ++R+EIL++K
Sbjct: 97  LLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHK 156

Query: 137 YRDAIIPSS-----SSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPL--SLPPPP 196
           Y++A   +S     +S+   + +S     + S    PP  PP PP  +PP L  S P PP
Sbjct: 157 YQEATTITSLQNNFNSTTTTSSVSCDQHALASAILLPP-PPPPPPTPRPPRLLSSQPAPP 216

Query: 197 P----------------------SSSAIYSSPISSAAPEFNTISAE-HISYF 219
           P                      +++++Y+ P SS A   N++S++ ++ YF
Sbjct: 217 PTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYF 267

[Close]

BLAST of MC04g1831 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.9e-37
Identity = 78/131 (59.54%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 28  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 87
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  SQR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 88  AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYKYRDAIIPSSSS 147
           A NSL YEA++RLRDPVYGC+G IS LQHQL+ LQ DL+  +SE+ KY+    I+ ++  
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSL-GILAATHQ 124

Query: 148 SPHIALISGAA 159
           S  I L++GAA
Sbjct: 125 SLGINLLAGAA 134

[Close]

BLAST of MC04g1831 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 71/103 (68.93%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 31  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 90
           +PCA+CKLLRRRCA++C F+PYF P +PHKFA VHKVFGASNV+KML E+P  QRADA N
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 91  SLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEIL 134
           SLV+EAN R+RDPVYGC+GAIS LQ+Q+  LQ  L   ++EIL
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEIL 109

[Close]

BLAST of MC04g1831 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 77/135 (57.04%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 31  TPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAAN 90
           +PCAACKLLRRRCAQ+C FSPYF   EP KFA+VH+VFGASNV KML E+P  QR DA +
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 91  SLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYKYRDAI--------- 150
           S+VYEAN R+RDPVYGC+GAIS+LQ Q+  LQA L   ++E++  + R +          
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 151 -IPSSSSSPHIALIS 156
             PSSS SP    +S
Sbjct: 132 DSPSSSGSPSSKQVS 146

[Close]

BLAST of MC04g1831 vs. NCBI nr
Match: XP_022134071.1 (LOB domain-containing protein 15-like [Momordica charantia])

HSP 1 Score: 414 bits (1064), Expect = 1.61e-145
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 3   MKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFA 62
           MKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFA
Sbjct: 1   MKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFA 60

Query: 63  SVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQ 122
           SVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQ
Sbjct: 61  SVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQ 120

Query: 123 ADLNSIRSEILKYKYRDAIIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPP 182
           ADLNSIRSEILKYKYRDAIIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPP
Sbjct: 121 ADLNSIRSEILKYKYRDAIIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPP 180

Query: 183 LSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF 218
           LSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF
Sbjct: 181 LSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF 216

[Close]

BLAST of MC04g1831 vs. NCBI nr
Match: KAG7016037.1 (LOB domain-containing protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303 bits (775), Expect = 2.86e-101
Identity = 171/207 (82.61%), Postives = 181/207 (87.44%), Query Frame = 0


Query: 17  RHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 76
           R  + S  G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM
Sbjct: 27  RRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 86

Query: 77  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYK 136
           LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLN+IR+EILKYK
Sbjct: 87  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYK 146

Query: 137 YRDAIIPS--SSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPLSLPPP-PPSSS 196
           YR+AIIPS  SSSS HIA IS     +VSTTATPP APPTPP SQPPPLSLPPP PPSSS
Sbjct: 147 YREAIIPSPSSSSSSHIAFISATG--LVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSS 206

Query: 197 AIYSSPISSA-APEF-NTISAEHISYF 218
           +I+S PIS+  AP+  N IS +HI YF
Sbjct: 207 SIFSPPISTTTAPQLINPISTQHIPYF 231

[Close]

BLAST of MC04g1831 vs. NCBI nr
Match: KAG6578472.1 (LOB domain-containing protein 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300 bits (769), Expect = 2.42e-100
Identity = 171/208 (82.21%), Postives = 180/208 (86.54%), Query Frame = 0


Query: 17  RHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 76
           R  + S  G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM
Sbjct: 27  RRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 86

Query: 77  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYK 136
           LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLN+IRSEILKYK
Sbjct: 87  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRSEILKYK 146

Query: 137 YRDAIIPS--SSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPLSLPPP--PPSS 196
           YR+AIIPS  SSSS HIA IS     +VSTTATPP APPTPP SQPPPLSLPPP  P SS
Sbjct: 147 YREAIIPSPSSSSSSHIAFISATG--LVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSS 206

Query: 197 SAIYSSPISSA-APEF-NTISAEHISYF 218
           S+I+S PIS+  AP+  N IS +HI YF
Sbjct: 207 SSIFSPPISTTTAPQLINPISTQHIPYF 232

[Close]

BLAST of MC04g1831 vs. NCBI nr
Match: XP_022939235.1 (LOB domain-containing protein 15-like [Cucurbita moschata] >XP_022993125.1 LOB domain-containing protein 15-like [Cucurbita maxima])

HSP 1 Score: 299 bits (766), Expect = 6.93e-100
Identity = 170/208 (81.73%), Postives = 180/208 (86.54%), Query Frame = 0


Query: 17  RHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 76
           R  + S  G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM
Sbjct: 27  RRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 86

Query: 77  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYK 136
           LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLN+IR+EILKYK
Sbjct: 87  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYK 146

Query: 137 YRDAIIPS--SSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPLSLPPP--PPSS 196
           YR+AIIPS  SSSS HIA IS     +VSTTATPP APPTPP SQPPPLSLPPP  P SS
Sbjct: 147 YREAIIPSPSSSSSSHIAFISATG--LVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSS 206

Query: 197 SAIYSSPISSA-APEF-NTISAEHISYF 218
           S+I+S PIS+  AP+  N IS +HI YF
Sbjct: 207 SSIFSPPISTTTAPQLINPISTQHIPYF 232

[Close]

BLAST of MC04g1831 vs. NCBI nr
Match: XP_023551227.1 (LOB domain-containing protein 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298 bits (763), Expect = 2.05e-99
Identity = 170/209 (81.34%), Postives = 180/209 (86.12%), Query Frame = 0


Query: 17  RHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 76
           R  + S  G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM
Sbjct: 27  RRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 86

Query: 77  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYK 136
           LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLN+IR+EILKYK
Sbjct: 87  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYK 146

Query: 137 YRDAIIPS--SSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPLSLPPPPP---S 196
           YR+AIIPS  SSSS HIA IS     +VSTTATPP APPTPP SQPPPLSLPPP P   S
Sbjct: 147 YREAIIPSPSSSSSSHIAFISATG--LVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSS 206

Query: 197 SSAIYSSPISSA-APEF-NTISAEHISYF 218
           SS+I+S PIS+  AP+  N IS +HI YF
Sbjct: 207 SSSIFSPPISTTTAPQLINPISTQHIPYF 233

[Close]

BLAST of MC04g1831 vs. ExPASy TrEMBL
Match: A0A6J1BWY3 (LOB domain-containing protein 15-like OS=Momordica charantia OX=3673 GN=LOC111006433 PE=3 SV=1)

HSP 1 Score: 414 bits (1064), Expect = 7.77e-146
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 3   MKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFA 62
           MKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFA
Sbjct: 1   MKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFA 60

Query: 63  SVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQ 122
           SVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQ
Sbjct: 61  SVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQ 120

Query: 123 ADLNSIRSEILKYKYRDAIIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPP 182
           ADLNSIRSEILKYKYRDAIIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPP
Sbjct: 121 ADLNSIRSEILKYKYRDAIIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPP 180

Query: 183 LSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF 218
           LSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF
Sbjct: 181 LSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF 216

[Close]

BLAST of MC04g1831 vs. ExPASy TrEMBL
Match: A0A6J1JXN5 (LOB domain-containing protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC111489239 PE=3 SV=1)

HSP 1 Score: 299 bits (766), Expect = 3.35e-100
Identity = 170/208 (81.73%), Postives = 180/208 (86.54%), Query Frame = 0


Query: 17  RHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 76
           R  + S  G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM
Sbjct: 27  RRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 86

Query: 77  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYK 136
           LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLN+IR+EILKYK
Sbjct: 87  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYK 146

Query: 137 YRDAIIPS--SSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPLSLPPP--PPSS 196
           YR+AIIPS  SSSS HIA IS     +VSTTATPP APPTPP SQPPPLSLPPP  P SS
Sbjct: 147 YREAIIPSPSSSSSSHIAFISATG--LVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSS 206

Query: 197 SAIYSSPISSA-APEF-NTISAEHISYF 218
           S+I+S PIS+  AP+  N IS +HI YF
Sbjct: 207 SSIFSPPISTTTAPQLINPISTQHIPYF 232

[Close]

BLAST of MC04g1831 vs. ExPASy TrEMBL
Match: A0A6J1FM44 (LOB domain-containing protein 15-like OS=Cucurbita moschata OX=3662 GN=LOC111445211 PE=3 SV=1)

HSP 1 Score: 299 bits (766), Expect = 3.35e-100
Identity = 170/208 (81.73%), Postives = 180/208 (86.54%), Query Frame = 0


Query: 17  RHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 76
           R  + S  G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM
Sbjct: 27  RRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 86

Query: 77  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYK 136
           LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLN+IR+EILKYK
Sbjct: 87  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYK 146

Query: 137 YRDAIIPS--SSSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPLSLPPP--PPSS 196
           YR+AIIPS  SSSS HIA IS     +VSTTATPP APPTPP SQPPPLSLPPP  P SS
Sbjct: 147 YREAIIPSPSSSSSSHIAFISATG--LVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSS 206

Query: 197 SAIYSSPISSA-APEF-NTISAEHISYF 218
           S+I+S PIS+  AP+  N IS +HI YF
Sbjct: 207 SSIFSPPISTTTAPQLINPISTQHIPYF 232

[Close]

BLAST of MC04g1831 vs. ExPASy TrEMBL
Match: A0A067JNV9 (LOB domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_03351 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 7.87e-86
Identity = 155/220 (70.45%), Postives = 176/220 (80.00%), Query Frame = 0


Query: 1   KKMKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK 60
           KK+KRET+   S    RH+L   G  LNTITPCAACKLLRRRCAQECPFSPYFSPHEP K
Sbjct: 13  KKIKRETDA-SSQMGRRHMLGPPG-TLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQK 72

Query: 61  FASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQT 120
           FASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGAISALQ Q+Q+
Sbjct: 73  FASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQS 132

Query: 121 LQADLNSIRSEILKYKYRDA-IIPSSSSSPHIALIS-GAAGVVVSTTATPPAAPPTPPHS 180
           LQA+LN+IR+EILKYKYR+A IIPSS    HIAL+S GA  VV  + +  P  PP PP  
Sbjct: 133 LQAELNAIRAEILKYKYREANIIPSS--HQHIALLSSGAVSVVTQSPSLTPQQPPQPPPP 192

Query: 181 QPPPLSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF 218
            PPP  LPP   SSS+IY+   +SAA ++ TIS EH+S+F
Sbjct: 193 PPPPPPLPPTSSSSSSIYTHQPTSAA-DYTTISNEHVSFF 227

[Close]

BLAST of MC04g1831 vs. ExPASy TrEMBL
Match: D7T4G0 (LOB domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_13s0067g02380 PE=3 SV=1)

HSP 1 Score: 262 bits (670), Expect = 9.76e-86
Identity = 154/222 (69.37%), Postives = 178/222 (80.18%), Query Frame = 0


Query: 1   KKMKRETEVLCSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHK 60
           KK+KRET+        RH+L   G  LN+ITPCAACKLLRRRCAQECPFSPYFSPHEP K
Sbjct: 13  KKIKRETDAFTQMGR-RHMLGPPG-TLNSITPCAACKLLRRRCAQECPFSPYFSPHEPQK 72

Query: 61  FASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQT 120
           FASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGAISALQ Q+Q+
Sbjct: 73  FASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQS 132

Query: 121 LQADLNSIRSEILKYKYRDA-IIPSSSSSPHIALISGAAGVVVSTTATPPAAPPT---PP 180
           LQA+LN++R+EILKYKYR+A IIP S    HIAL+S  A   VS  A PPA PP    PP
Sbjct: 133 LQAELNAVRAEILKYKYREANIIPPS----HIALLSSGA---VSVAAPPPAQPPAQAPPP 192

Query: 181 HSQPPPLSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF 218
              PPP+ LP PP SSS++Y+ P SSA  +++TIS+E++SYF
Sbjct: 193 PPPPPPIPLPLPPNSSSSMYTQPSSSA--DYSTISSENVSYF 223

[Close]

BLAST of MC04g1831 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 227.3 bits (578), Expect = 1.2e-59
Identity = 139/223 (62.33%), Postives = 162/223 (72.65%), Query Frame = 0


Query: 1   KKMKRETEVL-CSGNNYRHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH 60
           KK+KRE +         R  +S   G LNTITPCAACKLLRRRCAQECPFSPYFSPHEPH
Sbjct: 13  KKIKREADAWPHQMAGIRRPMSGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPH 72

Query: 61  KFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQ 120
           KFASVHKVFGASNV+KMLMEVPESQRADAANSLVYEAN+RLRDPVYGCMGAISALQ Q+Q
Sbjct: 73  KFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQ 132

Query: 121 TLQADLNSIRSEILKYKYRDA----IIPSSSSSPHIALISGAAGVVVSTTATPPAAPPTP 180
            LQA+L ++RSEILKYK R+A    I+PS+S    +A    + G  VS  A PP  P TP
Sbjct: 133 ALQAELTAVRSEILKYKQREAVATLIVPSNS---QVAGFHNSGG--VSVIAPPPQRPTTP 192

Query: 181 PHSQPPPLSLPPPPPSSSAIYSSPISSAAPEFNTISAEHISYF 219
           P     P +  PP P SS ++S P ++   E+  I +E+ +YF
Sbjct: 193 PQ----PTTAHPPSP-SSCVFSQP-TTRDLEYGNIESEN-NYF 223

[Close]

BLAST of MC04g1831 vs. TAIR 10
Match: AT2G30340.1 (LOB domain-containing protein 13 )

HSP 1 Score: 209.9 bits (533), Expect = 2.0e-54
Identity = 123/232 (53.02%), Postives = 160/232 (68.97%), Query Frame = 0


Query: 17  RHILSSNGGRLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKM 76
           RH+    G  LNT+TPCAACKLLRRRCA+ECPFSPYFSPHEPHKFA+VHKVFGASNV+KM
Sbjct: 37  RHVAVPPGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKM 96

Query: 77  LMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYK 136
           L+EV ESQR DAANSLVYEANLRLRDP+YGCMGAISALQH +Q+LQ++L ++R+EIL++K
Sbjct: 97  LLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHK 156

Query: 137 YRDAIIPSS-----SSSPHIALISGAAGVVVSTTATPPAAPPTPPHSQPPPL--SLPPPP 196
           Y++A   +S     +S+   + +S     + S    PP  PP PP  +PP L  S P PP
Sbjct: 157 YQEATTITSLQNNFNSTTTTSSVSCDQHALASAILLPP-PPPPPPTPRPPRLLSSQPAPP 216

Query: 197 P----------------------SSSAIYSSPISSAAPEFNTISAE-HISYF 219
           P                      +++++Y+ P SS A   N++S++ ++ YF
Sbjct: 217 PTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYF 267

[Close]

BLAST of MC04g1831 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-38
Identity = 78/131 (59.54%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 28  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 87
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  SQR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 88  AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYKYRDAIIPSSSS 147
           A NSL YEA++RLRDPVYGC+G IS LQHQL+ LQ DL+  +SE+ KY+    I+ ++  
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSL-GILAATHQ 124

Query: 148 SPHIALISGAA 159
           S  I L++GAA
Sbjct: 125 SLGINLLAGAA 134

[Close]

BLAST of MC04g1831 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-38
Identity = 78/131 (59.54%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 28  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 87
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  SQR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 88  AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYKYRDAIIPSSSS 147
           A NSL YEA++RLRDPVYGC+G IS LQHQL+ LQ DL+  +SE+ KY+    I+ ++  
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSL-GILAATHQ 124

Query: 148 SPHIALISGAA 159
           S  I L++GAA
Sbjct: 125 SLGINLLAGAA 134

[Close]

BLAST of MC04g1831 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-38
Identity = 78/131 (59.54%), Postives = 99/131 (75.57%), Query Frame = 0


Query: 28  NTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRAD 87
           +T +PCAACK LRR+C  EC F+PYF P +P KFA+VHKVFGASNV K+L E+  SQR D
Sbjct: 5   STNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQRED 64

Query: 88  AANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNSIRSEILKYKYRDAIIPSSSS 147
           A NSL YEA++RLRDPVYGC+G IS LQHQL+ LQ DL+  +SE+ KY+    I+ ++  
Sbjct: 65  AVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSL-GILAATHQ 124

Query: 148 SPHIALISGAA 159
           S  I L++GAA
Sbjct: 125 SLGINLLAGAA 134

The following BLAST results are available for this feature:

BLAST of MC04g1831 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L5T5	1.7e-58	62.33	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9AT61	2.9e-53	53.02	LOB domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=LBD13 PE=1 S...	[more]
O04479	4.9e-37	59.54	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q8LBW3	1.2e-35	68.93	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	1.2e-35	57.04	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]

BLAST of MC04g1831 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134071.1	1.61e-145	100.00	LOB domain-containing protein 15-like [Momordica charantia]	[more]
KAG7016037.1	2.86e-101	82.61	LOB domain-containing protein 13, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6578472.1	2.42e-100	82.21	LOB domain-containing protein 15, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022939235.1	6.93e-100	81.73	LOB domain-containing protein 15-like [Cucurbita moschata] >XP_022993125.1 LOB d...	[more]
XP_023551227.1	2.05e-99	81.34	LOB domain-containing protein 15-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC04g1831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BWY3	7.77e-146	100.00	LOB domain-containing protein 15-like OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1JXN5	3.35e-100	81.73	LOB domain-containing protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC11148923...	[more]
A0A6J1FM44	3.35e-100	81.73	LOB domain-containing protein 15-like OS=Cucurbita moschata OX=3662 GN=LOC111445...	[more]
A0A067JNV9	7.87e-86	70.45	LOB domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_03351 PE=3 SV...	[more]
D7T4G0	9.76e-86	69.37	LOB domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_13s0067g02380 PE...	[more]

BLAST of MC04g1831 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40470.1	1.2e-59	62.33	LOB domain-containing protein 15	[more]
AT2G30340.1	2.0e-54	53.02	LOB domain-containing protein 13	[more]
AT1G65620.1	3.5e-38	59.54	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	3.5e-38	59.54	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	3.5e-38	59.54	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..194
None	No IPR available	PANTHER	PTHR31301:SF161	BNAA03G19070D PROTEIN	coord: 18..218
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 18..218
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 32..128 e-value: 1.5E-40 score: 137.8
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 31..132 score: 25.567112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1831.1	MC04g1831.1	mRNA