MC04g1822 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1822
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING-H2 finger protein ATL74
Location	MC04: 25492327 .. 25492926 (-)
RNA-Seq Expression	MC04g1822
Synteny	MC04g1822

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCGATCACCACCGTCACCGTCCCCACCGCTTCCTCCTCGACGGCGACGCGACGGCGCCGCCGTCGAATGGAAACAGAACGCGAAGTTCGTACAGCAACGAAGCGAATTTCGACACGAATATGGTGATAATCCTCGCGGCGTTACTCTGCGCGCTGATTTGCGCTCTCGGACTGAATTCGATCGTCCGCTGCGCCCTCCGCTGCAGCCGGCGGTTCGCCTTCGAGACGGCCGGCGGCACATCCACGCGCCTCGCCGCCACGGGGCTGAAGAAAAGCGCATTACGCCAAATTCCGGTGGCCGTGTACGGGTCGGAGTCTGGTCTAGAGATCCGAGAAACGGACTGCCCTATTTGCTTGGGAGATTTCATCGCCGGCGAGAAAATCAAAGTTCTGCCCAAATGTAACCACGAGTTTCACGTACGATGTATCGACACGTGGTTGGCTTCCCACTCGTCTTGTCCGACATGTCGTCAGTCGCTGCTCGAACAACAGTCGTGTTCTGAATCGGCGGTAGCTGAAGCCGGAAACCGACCCGCCGGAAATTCGTCGGCCGGCGGCCAAGGTGAGATCTCGATTACTGTAGATGAAATTAGC

mRNA sequence

ATGGCGTCCGATCACCACCGTCACCGTCCCCACCGCTTCCTCCTCGACGGCGACGCGACGGCGCCGCCGTCGAATGGAAACAGAACGCGAAGTTCGTACAGCAACGAAGCGAATTTCGACACGAATATGGTGATAATCCTCGCGGCGTTACTCTGCGCGCTGATTTGCGCTCTCGGACTGAATTCGATCGTCCGCTGCGCCCTCCGCTGCAGCCGGCGGTTCGCCTTCGAGACGGCCGGCGGCACATCCACGCGCCTCGCCGCCACGGGGCTGAAGAAAAGCGCATTACGCCAAATTCCGGTGGCCGTGTACGGGTCGGAGTCTGGTCTAGAGATCCGAGAAACGGACTGCCCTATTTGCTTGGGAGATTTCATCGCCGGCGAGAAAATCAAAGTTCTGCCCAAATGTAACCACGAGTTTCACGTACGATGTATCGACACGTGGTTGGCTTCCCACTCGTCTTGTCCGACATGTCGTCAGTCGCTGCTCGAACAACAGTCGTGTTCTGAATCGGCGGTAGCTGAAGCCGGAAACCGACCCGCCGGAAATTCGTCGGCCGGCGGCCAAGGTGAGATCTCGATTACTGTAGATGAAATTAGC

Coding sequence (CDS)

ATGGCGTCCGATCACCACCGTCACCGTCCCCACCGCTTCCTCCTCGACGGCGACGCGACGGCGCCGCCGTCGAATGGAAACAGAACGCGAAGTTCGTACAGCAACGAAGCGAATTTCGACACGAATATGGTGATAATCCTCGCGGCGTTACTCTGCGCGCTGATTTGCGCTCTCGGACTGAATTCGATCGTCCGCTGCGCCCTCCGCTGCAGCCGGCGGTTCGCCTTCGAGACGGCCGGCGGCACATCCACGCGCCTCGCCGCCACGGGGCTGAAGAAAAGCGCATTACGCCAAATTCCGGTGGCCGTGTACGGGTCGGAGTCTGGTCTAGAGATCCGAGAAACGGACTGCCCTATTTGCTTGGGAGATTTCATCGCCGGCGAGAAAATCAAAGTTCTGCCCAAATGTAACCACGAGTTTCACGTACGATGTATCGACACGTGGTTGGCTTCCCACTCGTCTTGTCCGACATGTCGTCAGTCGCTGCTCGAACAACAGTCGTGTTCTGAATCGGCGGTAGCTGAAGCCGGAAACCGACCCGCCGGAAATTCGTCGGCCGGCGGCCAAGGTGAGATCTCGATTACTGTAGATGAAATTAGC

Protein sequence

MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITVDEIS

Homology

[Close]

BLAST of MC04g1822 vs. ExPASy Swiss-Prot
Match: Q9SG96 (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.4e-44
Identity = 99/163 (60.74%), Postives = 115/163 (70.55%), Query Frame = 0


Query: 12  RFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCS 71
           R LL+  A A P+N N       N+  FDTNMVIILAALLCALICAL LNS +RC LR +
Sbjct: 3   RLLLEPQANA-PANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRIT 62

Query: 72  RRFAFE-------TAGGTSTRL-AATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGD 131
           RRF  +        A     RL AATGLKK AL+QIPV +YGS   ++++ T+C ICLGD
Sbjct: 63  RRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGS-GIIDMKATECLICLGD 122

Query: 132 FIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQ 167
           F  GEK++VLPKCNH FHVRCIDTWL S SSCPTCRQSLL +Q
Sbjct: 123 FEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQ 163

[Close]

BLAST of MC04g1822 vs. ExPASy Swiss-Prot
Match: Q9FLC6 (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.6e-42
Identity = 93/163 (57.06%), Postives = 113/163 (69.33%), Query Frame = 0


Query: 12  RFLLDGDAT-------APPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIV 71
           RFLL   AT       A P     + S+  N A+ DT+MVIILAALLCALICALG+NS++
Sbjct: 3   RFLLATQATPTISATDANPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVL 62

Query: 72  RCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDF 131
           RC LRC+RRF        +    A G+KK AL+ IPV  Y  E  L+++ T+C ICLGDF
Sbjct: 63  RCVLRCTRRFTPNEDPVDTNANVAKGIKKRALKVIPVDSYSPE--LKMKATECLICLGDF 122

Query: 132 IAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQS 168
           + GE ++VLPKCNH FHV+CIDTWL SHSSCPTCRQSLLE Q+
Sbjct: 123 VEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLEHQT 163

[Close]

BLAST of MC04g1822 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-40
Identity = 85/154 (55.19%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 11  HRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRC 70
           HR LL+       ++G+     Y+ + NFD NMVIILAALLCALI ALGLNSI+RCA+RC
Sbjct: 2   HRLLLESHGGGNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRC 61

Query: 71  SRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI 130
               +   A GT    A  GLKK  L++ PVA YGS   ++I  T+C ICLG+F  GE++
Sbjct: 62  GFGLSSSAAAGTVADRA--GLKKRELKKFPVAEYGS-GEVKIAATECAICLGEFADGERV 121

Query: 131 KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE 165
           +VLP CNH FH+ CIDTWL SHSSCP CR SL+E
Sbjct: 122 RVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIE 152

[Close]

BLAST of MC04g1822 vs. ExPASy Swiss-Prot
Match: Q6NQG7 (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.8e-36
Identity = 78/167 (46.71%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 31  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGT-STRLAAT 90
           S Y  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS     E  G     RL  T
Sbjct: 44  SPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNT 103

Query: 91  GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWL 150
           G+K+ AL+      Y +E  L   +T+C ICL +F+A E++K+LP C+H FHVRCID WL
Sbjct: 104 GVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWL 163

Query: 151 ASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITV 197
           +SHSSCPTCR  L+  Q+C +  +A+     + NS+   Q  I + +
Sbjct: 164 SSHSSCPTCRHCLI--QTCEK--IADCSQTSSLNSTQPPQDSIILQI 206

[Close]

BLAST of MC04g1822 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.1e-30
Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 34  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE--TAGGTSTRLAAT-G 93
           ++E N   N++++L+ L+C +IC LGL+ I+RCALR S RF         +STR ++  G
Sbjct: 49  THENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKG 108

Query: 94  LKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLA 153
           +KK ALR  PV  Y  E  L   + +C ICL DF++GE++++LPKCNH FHVRCID WL 
Sbjct: 109 IKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQ 168

Query: 154 SHSSCPTCRQSLLE 165
            H +CP CR  L+E
Sbjct: 169 QHLTCPKCRNCLVE 182

[Close]

BLAST of MC04g1822 vs. NCBI nr
Match: XP_022134542.1 (RING-H2 finger protein ATL74 [Momordica charantia])

HSP 1 Score: 378 bits (970), Expect = 7.03e-132
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL
Sbjct: 3   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 62

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC
Sbjct: 63  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 122

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP
Sbjct: 123 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 182

Query: 181 AGNSSAGGQG 190
           AGNSSAGGQG
Sbjct: 183 AGNSSAGGQG 192

[Close]

BLAST of MC04g1822 vs. NCBI nr
Match: KAA0052006.1 (RING-H2 finger protein ATL72 [Cucumis melo var. makuwa] >TYK04553.1 RING-H2 finger protein ATL72 [Cucumis melo var. makuwa])

HSP 1 Score: 349 bits (896), Expect = 1.72e-120
Identity = 177/199 (88.94%), Postives = 186/199 (93.47%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           M S+HHR R HR LLD D TA PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGL
Sbjct: 1   MESNHHRPRSHRLLLDADTTAAPSNGSRTRNSYNNEANFDTNMVIILAALLCALICALGL 60

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCALRCSRRFAFET GGT++RL A+GLKKSALRQIPVAVYGSE+GLEIRETDCPIC
Sbjct: 61  NSIVRCALRCSRRFAFETGGGTASRLTASGLKKSALRQIPVAVYGSETGLEIRETDCPIC 120

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL+EQQS SESA AEAGNRP
Sbjct: 121 LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLVEQQSVSESAGAEAGNRP 180

Query: 181 AGNSSAGGQGEISITVDEI 199
           AGNSSA GQGEISITVDEI
Sbjct: 181 AGNSSASGQGEISITVDEI 199

[Close]

BLAST of MC04g1822 vs. NCBI nr
Match: XP_023550807.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo] >XP_023550808.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (878), Expect = 1.02e-117
Identity = 171/200 (85.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           M SDHHR RPHR LLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGL
Sbjct: 3   MVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGL 62

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCALRCSRRF+FET GGT++RLAATGLKKSALR++PV VYGSESGL IRETDCPIC
Sbjct: 63  NSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPIC 122

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRP
Sbjct: 123 LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGNRP 182

Query: 181 AGNSSAGGQGEISITVDEIS 200
           AGNSSA GQGEISI +D+IS
Sbjct: 183 AGNSSASGQGEISIPIDQIS 202

[Close]

BLAST of MC04g1822 vs. NCBI nr
Match: XP_022938777.1 (RING-H2 finger protein ATL74-like [Cucurbita moschata])

HSP 1 Score: 341 bits (874), Expect = 4.16e-117
Identity = 170/200 (85.00%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           M SDHHR RPHR LLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGL
Sbjct: 3   MVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGL 62

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCA RCSRRF+FET GGT++RLAATGLKKSALR++PV VYGSESGL IRETDCPIC
Sbjct: 63  NSIVRCAFRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPIC 122

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRP
Sbjct: 123 LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGNRP 182

Query: 181 AGNSSAGGQGEISITVDEIS 200
           AGNSSA GQGEISI +D+IS
Sbjct: 183 AGNSSASGQGEISIPIDQIS 202

[Close]

BLAST of MC04g1822 vs. NCBI nr
Match: KAG7016045.1 (RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 342 bits (878), Expect = 4.45e-117
Identity = 171/200 (85.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           M SDHHR RPHR LLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGL
Sbjct: 45  MVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGL 104

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCALRCSRRF+FET GGT++RLAATGLKKSALR++PV VYGSESGL IRETDCPIC
Sbjct: 105 NSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPIC 164

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRP
Sbjct: 165 LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGNRP 224

Query: 181 AGNSSAGGQGEISITVDEIS 200
           AGNSSA GQGEISI +D+IS
Sbjct: 225 AGNSSASGQGEISIPIDQIS 244

[Close]

BLAST of MC04g1822 vs. ExPASy TrEMBL
Match: A0A6J1BZW4 (RING-H2 finger protein ATL74 OS=Momordica charantia OX=3673 GN=LOC111006761 PE=4 SV=1)

HSP 1 Score: 378 bits (970), Expect = 3.40e-132
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL
Sbjct: 3   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 62

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC
Sbjct: 63  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 122

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP
Sbjct: 123 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 182

Query: 181 AGNSSAGGQG 190
           AGNSSAGGQG
Sbjct: 183 AGNSSAGGQG 192

[Close]

BLAST of MC04g1822 vs. ExPASy TrEMBL
Match: A0A5D3BXT6 (RING-H2 finger protein ATL72 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001810 PE=4 SV=1)

HSP 1 Score: 349 bits (896), Expect = 8.33e-121
Identity = 177/199 (88.94%), Postives = 186/199 (93.47%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           M S+HHR R HR LLD D TA PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGL
Sbjct: 1   MESNHHRPRSHRLLLDADTTAAPSNGSRTRNSYNNEANFDTNMVIILAALLCALICALGL 60

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCALRCSRRFAFET GGT++RL A+GLKKSALRQIPVAVYGSE+GLEIRETDCPIC
Sbjct: 61  NSIVRCALRCSRRFAFETGGGTASRLTASGLKKSALRQIPVAVYGSETGLEIRETDCPIC 120

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL+EQQS SESA AEAGNRP
Sbjct: 121 LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLVEQQSVSESAGAEAGNRP 180

Query: 181 AGNSSAGGQGEISITVDEI 199
           AGNSSA GQGEISITVDEI
Sbjct: 181 AGNSSASGQGEISITVDEI 199

[Close]

BLAST of MC04g1822 vs. ExPASy TrEMBL
Match: A0A0A0KAH2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014550 PE=4 SV=1)

HSP 1 Score: 347 bits (890), Expect = 7.34e-120
Identity = 176/199 (88.44%), Postives = 185/199 (92.96%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           M S+HHR RP R LLD D TAPPSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGL
Sbjct: 3   MESNHHRPRPPRLLLDPDTTAPPSNGSRTRNSYNNEANFDTNMVIILAALLCALICALGL 62

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCALRCSRRFAFET GGT++RL ATGLKKSALRQIPVAVYGSE+GLEIRETDCPIC
Sbjct: 63  NSIVRCALRCSRRFAFETGGGTASRLTATGLKKSALRQIPVAVYGSETGLEIRETDCPIC 122

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDF+AGEKIK+LPKCNH FHVRCIDTWLASHSSCPTCRQSLLEQQS SESAV EAGNR 
Sbjct: 123 LGDFMAGEKIKILPKCNHGFHVRCIDTWLASHSSCPTCRQSLLEQQSVSESAVTEAGNRG 182

Query: 181 AGNSSAGGQGEISITVDEI 199
           AGNSSA GQGEISITVD I
Sbjct: 183 AGNSSASGQGEISITVDGI 201

[Close]

BLAST of MC04g1822 vs. ExPASy TrEMBL
Match: A0A6J1FF16 (RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111444892 PE=4 SV=1)

HSP 1 Score: 341 bits (874), Expect = 2.01e-117
Identity = 170/200 (85.00%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           M SDHHR RPHR LLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGL
Sbjct: 3   MVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGL 62

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCA RCSRRF+FET GGT++RLAATGLKKSALR++PV VYGSESGL IRETDCPIC
Sbjct: 63  NSIVRCAFRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPIC 122

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRP
Sbjct: 123 LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGNRP 182

Query: 181 AGNSSAGGQGEISITVDEIS 200
           AGNSSA GQGEISI +D+IS
Sbjct: 183 AGNSSASGQGEISIPIDQIS 202

[Close]

BLAST of MC04g1822 vs. ExPASy TrEMBL
Match: A0A6J1JVF4 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111489233 PE=4 SV=1)

HSP 1 Score: 340 bits (873), Expect = 2.86e-117
Identity = 170/200 (85.00%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 1   MASDHHRHRPHRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGL 60
           M SDHHR RPHR LLD + T  PSNG+RTR+SY+NEANFDTNMVIILAALLCALICALGL
Sbjct: 3   MVSDHHRPRPHRLLLDANTTEAPSNGSRTRNSYTNEANFDTNMVIILAALLCALICALGL 62

Query: 61  NSIVRCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPIC 120
           NSIVRCALRCSRRF+FET GGT++RLAATGLKKSALR++PV VYGSESGL IRETDCPIC
Sbjct: 63  NSIVRCALRCSRRFSFETGGGTASRLAATGLKKSALRKLPVTVYGSESGLGIRETDCPIC 122

Query: 121 LGDFIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQSCSESAVAEAGNRP 180
           LGDFIAGEKIKVLPKCNH FHVRCIDTWLASHSSCPTCRQSL EQQS SES  A+AGNRP
Sbjct: 123 LGDFIAGEKIKVLPKCNHGFHVRCIDTWLASHSSCPTCRQSLFEQQSASESTEADAGNRP 182

Query: 181 AGNSSAGGQGEISITVDEIS 200
           AGN SA GQGEISI +D+IS
Sbjct: 183 AGNPSASGQGEISIPIDQIS 202

[Close]

BLAST of MC04g1822 vs. TAIR 10
Match: AT3G10910.1 (RING/U-box superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 6.0e-45
Identity = 99/163 (60.74%), Postives = 115/163 (70.55%), Query Frame = 0


Query: 12  RFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCS 71
           R LL+  A A P+N N       N+  FDTNMVIILAALLCALICAL LNS +RC LR +
Sbjct: 3   RLLLEPQANA-PANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRIT 62

Query: 72  RRFAFE-------TAGGTSTRL-AATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGD 131
           RRF  +        A     RL AATGLKK AL+QIPV +YGS   ++++ T+C ICLGD
Sbjct: 63  RRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGS-GIIDMKATECLICLGD 122

Query: 132 FIAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQ 167
           F  GEK++VLPKCNH FHVRCIDTWL S SSCPTCRQSLL +Q
Sbjct: 123 FEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQ 163

[Close]

BLAST of MC04g1822 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-43
Identity = 93/163 (57.06%), Postives = 113/163 (69.33%), Query Frame = 0


Query: 12  RFLLDGDAT-------APPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIV 71
           RFLL   AT       A P     + S+  N A+ DT+MVIILAALLCALICALG+NS++
Sbjct: 3   RFLLATQATPTISATDANPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVL 62

Query: 72  RCALRCSRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDF 131
           RC LRC+RRF        +    A G+KK AL+ IPV  Y  E  L+++ T+C ICLGDF
Sbjct: 63  RCVLRCTRRFTPNEDPVDTNANVAKGIKKRALKVIPVDSYSPE--LKMKATECLICLGDF 122

Query: 132 IAGEKIKVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLEQQS 168
           + GE ++VLPKCNH FHV+CIDTWL SHSSCPTCRQSLLE Q+
Sbjct: 123 VEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLEHQT 163

[Close]

BLAST of MC04g1822 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 85/154 (55.19%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 11  HRFLLDGDATAPPSNGNRTRSSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRC 70
           HR LL+       ++G+     Y+ + NFD NMVIILAALLCALI ALGLNSI+RCA+RC
Sbjct: 2   HRLLLESHGGGNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRC 61

Query: 71  SRRFAFETAGGTSTRLAATGLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKI 130
               +   A GT    A  GLKK  L++ PVA YGS   ++I  T+C ICLG+F  GE++
Sbjct: 62  GFGLSSSAAAGTVADRA--GLKKRELKKFPVAEYGS-GEVKIAATECAICLGEFADGERV 121

Query: 131 KVLPKCNHEFHVRCIDTWLASHSSCPTCRQSLLE 165
           +VLP CNH FH+ CIDTWL SHSSCP CR SL+E
Sbjct: 122 RVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIE 152

[Close]

BLAST of MC04g1822 vs. TAIR 10
Match: AT1G49230.1 (RING/U-box superfamily protein )

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-37
Identity = 78/167 (46.71%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 31  SSYSNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETAGGT-STRLAAT 90
           S Y  + NFD N+V++L+ LLCAL+C+LGLNSI+RCALRCS     E  G     RL  T
Sbjct: 44  SPYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNT 103

Query: 91  GLKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWL 150
           G+K+ AL+      Y +E  L   +T+C ICL +F+A E++K+LP C+H FHVRCID WL
Sbjct: 104 GVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWL 163

Query: 151 ASHSSCPTCRQSLLEQQSCSESAVAEAGNRPAGNSSAGGQGEISITV 197
           +SHSSCPTCR  L+  Q+C +  +A+     + NS+   Q  I + +
Sbjct: 164 SSHSSCPTCRHCLI--QTCEK--IADCSQTSSLNSTQPPQDSIILQI 206

[Close]

BLAST of MC04g1822 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 6.4e-31
Identity = 64/134 (47.76%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 34  SNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFE--TAGGTSTRLAAT-G 93
           ++E N   N++++L+ L+C +IC LGL+ I+RCALR S RF         +STR ++  G
Sbjct: 49  THENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKG 108

Query: 94  LKKSALRQIPVAVYGSESGLEIRETDCPICLGDFIAGEKIKVLPKCNHEFHVRCIDTWLA 153
           +KK ALR  PV  Y  E  L   + +C ICL DF++GE++++LPKCNH FHVRCID WL 
Sbjct: 109 IKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQ 168

Query: 154 SHSSCPTCRQSLLE 165
            H +CP CR  L+E
Sbjct: 169 QHLTCPKCRNCLVE 182

The following BLAST results are available for this feature:

BLAST of MC04g1822 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SG96	8.4e-44	60.74	RING-H2 finger protein ATL72 OS=Arabidopsis thaliana OX=3702 GN=ATL72 PE=2 SV=1	[more]
Q9FLC6	1.6e-42	57.06	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1	[more]
Q9LZV8	1.5e-40	55.19	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]
Q6NQG7	3.8e-36	46.71	RING-H2 finger protein ATL78 OS=Arabidopsis thaliana OX=3702 GN=ATL78 PE=2 SV=1	[more]
P0C034	9.1e-30	47.76	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]

BLAST of MC04g1822 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134542.1	7.03e-132	100.00	RING-H2 finger protein ATL74 [Momordica charantia]	[more]
KAA0052006.1	1.72e-120	88.94	RING-H2 finger protein ATL72 [Cucumis melo var. makuwa] >TYK04553.1 RING-H2 fing...	[more]
XP_023550807.1	1.02e-117	85.50	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo] >XP_023550808.1 R...	[more]
XP_022938777.1	4.16e-117	85.00	RING-H2 finger protein ATL74-like [Cucurbita moschata]	[more]
KAG7016045.1	4.45e-117	85.50	RING-H2 finger protein ATL72, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of MC04g1822 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZW4	3.40e-132	100.00	RING-H2 finger protein ATL74 OS=Momordica charantia OX=3673 GN=LOC111006761 PE=4...	[more]
A0A5D3BXT6	8.33e-121	88.94	RING-H2 finger protein ATL72 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0KAH2	7.34e-120	88.44	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014550 P...	[more]
A0A6J1FF16	2.01e-117	85.00	RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111444892 ...	[more]
A0A6J1JVF4	2.86e-117	85.00	RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111489233 PE...	[more]

BLAST of MC04g1822 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10910.1	6.0e-45	60.74	RING/U-box superfamily protein	[more]
AT5G05280.1	1.1e-43	57.06	RING/U-box superfamily protein	[more]
AT5G01880.1	1.1e-41	55.19	RING/U-box superfamily protein	[more]
AT1G49230.1	2.7e-37	46.71	RING/U-box superfamily protein	[more]
AT1G49220.1	6.4e-31	47.76	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 117..158 e-value: 1.1E-7 score: 41.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 116..159 e-value: 5.0E-13 score: 49.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 117..159 score: 12.238477
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 78..164 e-value: 4.9E-23 score: 82.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..200
None	No IPR available	PANTHER	PTHR45798:SF44	RING-H2 FINGER PROTEIN ATL74	coord: 11..183
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 11..183
None	No IPR available	CDD	cd16486	mRING-H2-C3H2C2D_ZSWM2	coord: 117..159 e-value: 1.36707E-16 score: 68.4073
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 110..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1822.1	MC04g1822.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane