MC04g1750 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1750
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC04: 24908319 .. 24908651 (+)
RNA-Seq Expression	MC04g1750
Synteny	MC04g1750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTGCAGTGGCAATGGCGGCGATGATGGTGGTGTTCCTCTCTTCCACCAATTGCAGAGCTTCGATACTGATGAAATCCAACGCCACCTACGGCTGCGGCGGCGGCGGCGGCGAATGTTTGGGAATCTCGGAGGCGGTGGCGGCGGAGTTGATGGTGGGTAGCCACGTGGCGCGGTTTCTGGATTTTAAAGACAACAAACCGAAAACAGATGCGACGAAAAACCGTAATGTGGGGACCTGCGGGAGCGGCGCCGGAAACCCTAAGGGCGCCTGCAACGGCGACCCGAAGAGTAAAAAAAAATGCCCCACGTACGGCGGCTCCGCCACCTGC

mRNA sequence

TTTCCTGCAGTGGCAATGGCGGCGATGATGGTGGTGTTCCTCTCTTCCACCAATTGCAGAGCTTCGATACTGATGAAATCCAACGCCACCTACGGCTGCGGCGGCGGCGGCGGCGAATGTTTGGGAATCTCGGAGGCGGTGGCGGCGGAGTTGATGGTGGGTAGCCACGTGGCGCGGTTTCTGGATTTTAAAGACAACAAACCGAAAACAGATGCGACGAAAAACCGTAATGTGGGGACCTGCGGGAGCGGCGCCGGAAACCCTAAGGGCGCCTGCAACGGCGACCCGAAGAGTAAAAAAAAATGCCCCACGTACGGCGGCTCCGCCACCTGC

Coding sequence (CDS)

TTTCCTGCAGTGGCAATGGCGGCGATGATGGTGGTGTTCCTCTCTTCCACCAATTGCAGAGCTTCGATACTGATGAAATCCAACGCCACCTACGGCTGCGGCGGCGGCGGCGGCGAATGTTTGGGAATCTCGGAGGCGGTGGCGGCGGAGTTGATGGTGGGTAGCCACGTGGCGCGGTTTCTGGATTTTAAAGACAACAAACCGAAAACAGATGCGACGAAAAACCGTAATGTGGGGACCTGCGGGAGCGGCGCCGGAAACCCTAAGGGCGCCTGCAACGGCGACCCGAAGAGTAAAAAAAAATGCCCCACGTACGGCGGCTCCGCCACCTGC

Protein sequence

FPAVAMAAMMVVFLSSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC

Homology

[Close]

BLAST of MC04g1750 vs. NCBI nr
Match: KAG6578548.1 (hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 82.8 bits (203), Expect = 7.25e-18
Identity = 50/113 (44.25%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 1   FPAVAMAAMMVVFL--SSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVA 60
           F  VA+AA+MV  +  SS + RAS L ++NATYG              V  EL+V   +A
Sbjct: 7   FWGVAVAALMVTIILCSSNSSRASSLGRANATYG-------------EVEVELLVRREIA 66

Query: 61  RFLDFKDNKPKTDATKNRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
           RFL+FK+ K  TD T+N  V +CG+G GNP G C+G P +KK C +Y G++ C
Sbjct: 67  RFLNFKNMKVYTDKTQNPFVKSCGNGPGNPMGDCSGSPTNKKHCNSYAGASAC 106

[Close]

BLAST of MC04g1750 vs. NCBI nr
Match: KAA0039430.1 (hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa] >TYK00619.1 hypothetical protein E5676_scaffold169G002390 [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 1.47e-12
Identity = 37/100 (37.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 12  VFLSSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTD 71
           +F SS +CR S+L+K+NATY               +  EL++   + R+L F     KT 
Sbjct: 21  IFCSSHSCRGSVLIKANATY------------DVVMTEELLIYPDINRYLMFNGVDAKTG 80

Query: 72  ATKNRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
            T ++NV  CG+GAGN    C+G   +KKKC  Y G   C
Sbjct: 81  KTNDKNVVACGNGAGNSFAGCSGSTSNKKKCNAYKGPKAC 108

[Close]

BLAST of MC04g1750 vs. NCBI nr
Match: KGN52518.1 (hypothetical protein Csa_007870 [Cucumis sativus])

HSP 1 Score: 65.1 bits (157), Expect = 7.69e-11
Identity = 36/100 (36.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 12  VFLSSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTD 71
           +  SS  CRAS+L+K+NATYG              + AEL++   V R+L +     KT 
Sbjct: 26  ILYSSHTCRASVLIKANATYG------------GVMTAELLIYPDVTRYLMYDHADSKTG 85

Query: 72  ATKNRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
            TK++ V  C +G GN    C G   +KK+C  YG    C
Sbjct: 86  KTKDKEVVVCDNGKGNSFSGCGGSSSNKKQCNAYGDPKDC 113

[Close]

BLAST of MC04g1750 vs. NCBI nr
Match: KGN52519.1 (hypothetical protein Csa_008872 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 9.88e-11
Identity = 36/97 (37.11%), Postives = 50/97 (51.55%), Query Frame = 0


Query: 15  SSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTDATK 74
           SS +CR SILMK+NAT G              +  EL++   + R+L FK     T AT 
Sbjct: 25  SSYSCRGSILMKANATLG------------SVMTTELIIKHDITRYLIFKGATAVTGATA 84

Query: 75  NRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
           + N+ TCG+GAGN    C G+  + ++C  Y G   C
Sbjct: 85  DPNIVTCGNGAGNTFSGCGGNANNTQQCNAYQGPNAC 109

[Close]

BLAST of MC04g1750 vs. NCBI nr
Match: KAA0039429.1 (hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa] >TYK00618.1 hypothetical protein E5676_scaffold169G002380 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 2.42e-08
Identity = 34/97 (35.05%), Postives = 51/97 (52.58%), Query Frame = 0


Query: 15  SSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTDATK 74
           SS +CR S+LMK+NATYG         G+S     E+++   + RFL    +KP T  T 
Sbjct: 25  SSYSCRGSVLMKANATYG---------GVS---TTEMIIYHDITRFLMPPGSKPVTGNTG 84

Query: 75  NRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
             N+  C +G GN  G C G+  ++++C  Y  +  C
Sbjct: 85  EPNIVPCNNGPGNQFGQCGGNANNQQQCNRYDTTKPC 109

[Close]

BLAST of MC04g1750 vs. ExPASy TrEMBL
Match: A0A5D3BR80 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002390 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.14e-13
Identity = 37/100 (37.00%), Postives = 52/100 (52.00%), Query Frame = 0


Query: 12  VFLSSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTD 71
           +F SS +CR S+L+K+NATY               +  EL++   + R+L F     KT 
Sbjct: 21  IFCSSHSCRGSVLIKANATY------------DVVMTEELLIYPDINRYLMFNGVDAKTG 80

Query: 72  ATKNRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
            T ++NV  CG+GAGN    C+G   +KKKC  Y G   C
Sbjct: 81  KTNDKNVVACGNGAGNSFAGCSGSTSNKKKCNAYKGPKAC 108

[Close]

BLAST of MC04g1750 vs. ExPASy TrEMBL
Match: A0A0A0KSJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640520 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.72e-11
Identity = 36/100 (36.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 12  VFLSSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTD 71
           +  SS  CRAS+L+K+NATYG              + AEL++   V R+L +     KT 
Sbjct: 26  ILYSSHTCRASVLIKANATYG------------GVMTAELLIYPDVTRYLMYDHADSKTG 85

Query: 72  ATKNRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
            TK++ V  C +G GN    C G   +KK+C  YG    C
Sbjct: 86  KTKDKEVVVCDNGKGNSFSGCGGSSSNKKQCNAYGDPKDC 113

[Close]

BLAST of MC04g1750 vs. ExPASy TrEMBL
Match: A0A0A0KUG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640530 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.78e-11
Identity = 36/97 (37.11%), Postives = 50/97 (51.55%), Query Frame = 0


Query: 15  SSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTDATK 74
           SS +CR SILMK+NAT G              +  EL++   + R+L FK     T AT 
Sbjct: 25  SSYSCRGSILMKANATLG------------SVMTTELIIKHDITRYLIFKGATAVTGATA 84

Query: 75  NRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
           + N+ TCG+GAGN    C G+  + ++C  Y G   C
Sbjct: 85  DPNIVTCGNGAGNTFSGCGGNANNTQQCNAYQGPNAC 109

[Close]

BLAST of MC04g1750 vs. ExPASy TrEMBL
Match: A0A0A0KVT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640510 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.29e-10
Identity = 36/100 (36.00%), Postives = 48/100 (48.00%), Query Frame = 0


Query: 12  VFLSSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTD 71
           +  SS +CR S+L+K+NATY               +  ELM+   + R L    +K KT 
Sbjct: 21  ILFSSHSCRGSVLIKANATY------------DVVMTEELMIYGDINRHLMPSGSKAKTG 80

Query: 72  ATKNRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
            T  RNV  CG+GAGN    C G   ++ KC  Y G   C
Sbjct: 81  KTHERNVVACGNGAGNTYAVCGGSISNENKCDAYKGPNAC 108

[Close]

BLAST of MC04g1750 vs. ExPASy TrEMBL
Match: A0A5D3BNE4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002380 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.17e-08
Identity = 34/97 (35.05%), Postives = 51/97 (52.58%), Query Frame = 0


Query: 15  SSTNCRASILMKSNATYGCGGGGGECLGISEAVAAELMVGSHVARFLDFKDNKPKTDATK 74
           SS +CR S+LMK+NATYG         G+S     E+++   + RFL    +KP T  T 
Sbjct: 25  SSYSCRGSVLMKANATYG---------GVS---TTEMIIYHDITRFLMPPGSKPVTGNTG 84

Query: 75  NRNVGTCGSGAGNPKGACNGDPKSKKKCPTYGGSATC 111
             N+  C +G GN  G C G+  ++++C  Y  +  C
Sbjct: 85  EPNIVPCNNGPGNQFGQCGGNANNQQQCNRYDTTKPC 109

The following BLAST results are available for this feature:

BLAST of MC04g1750 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g1750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578548.1	7.25e-18	44.25	hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0039430.1	1.47e-12	37.00	hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa] >TYK0061...	[more]
KGN52518.1	7.69e-11	36.00	hypothetical protein Csa_007870 [Cucumis sativus]	[more]
KGN52519.1	9.88e-11	37.11	hypothetical protein Csa_008872 [Cucumis sativus]	[more]
KAA0039429.1	2.42e-08	35.05	hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa] >TYK0061...	[more]

BLAST of MC04g1750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BR80	7.14e-13	37.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KSJ4	3.72e-11	36.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640520 PE=4 SV=1	[more]
A0A0A0KUG7	4.78e-11	37.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640530 PE=4 SV=1	[more]
A0A0A0KVT8	1.29e-10	36.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640510 PE=4 SV=1	[more]
A0A5D3BNE4	1.17e-08	35.05	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MC04g1750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1750.1	MC04g1750.1	mRNA