MC04g1724 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1724
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Transmembrane protein 230
Location	MC04: 24736107 .. 24737526 (-)
RNA-Seq Expression	MC04g1724
Synteny	MC04g1724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCTAGGCGGAATGTTCGTTACAGCTCCCTTCCCACTGATGATAACGATCTTGATTATGAAGGAAGTCAGTATGACCCTCGCTTTTCTTATACACCCAAATCTTTTGACAAGGTCCCCTGGAAATCCATCGCTCTTGCAATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTTGTATTAAGAGGTCACATGCCAGGAGAGAAATCTCAAGCCTATGGTCTTCTAGCGTTGGGGGTTCTGACCTTCCTCCCAGGTATTGAAATTTCTCTCTTTTATATGGTTTTTGACATGTGGCTTTTGTTATATGTTTATAAATGTTAGCTGTTTATTCCGATGCTGGATATGTGAATCTTGGCTGCTAGGTCAAGCCATAGTTGACGTAATGGAATCGATTTTGTTGATCTATTACAAGTAATAAGGTGTGAGCTAACATTTTGAAAGAGAGTTGTGAGTGAACTGGCTTCTTGCTTTTCTAACATTTGGAGGGCCTGTAGCATTTATGAGAGCTGAAGAAAAATAACAGAAAAGAGCAGGGACTATATTTTATTATGCTGTCGATGTTAAATTGGATGACTCTAAAGCCCCTCCAGTATTAGTTATCCTGATTGTTGTACTCCTTTTTGAAGTCTCGCTCTTAATTATTATTGTAGTTGTAACTTTCGTTCTTTTTCTTTTCTCAAGTAAAATAGAGACACATCTAATGGACATTTCTGTTTCATGTCTTTGTGAACACTTTTATTCAATAGATGTGCATTTAATAGCCATATTTTATATCTCTTTAAGAGAAAAAACACAATCTTTTGAATTTTATGTTTATTTGAATATTTGAATATTTTTAGTATTTAAAATGGTCAGGATCGTCCAGGAAAGAAACATTGAAATAATGATAAAAATATATACGAACAGGAACATTCCTGGCCCATAGGACTTGTAAAAAACACTCAAATTGCACAGATGGAGGAAGAATATATTACAACAAAATGTGAAGCGTACCAAATCTCCAGAAAGAAAGTACTAGTTAATACTTGTTAGTGTTTTGCTATTAAGCTGCCCTGACTATCAATTTAATTTATTTGGTTCGTACATCTCATACAAGTATGGTACTTGTTTCTGTCATTCTGTCATGGACAGTTTTGTTCTTAGAAATTTGATTCTTATTTATTTTCTTATTTTTCCTTTAAACAATACAAAATGTATCCAGAAATCCAAAATGGAGTGTGAATCAAAGTTCTATTTCTATTGAAAATGATGTCGGTAGAAGTGCTGTTGGCTCATCCTATCCTAGAATTTTGATAATCTGAGCAACTATTGCTTTTTTGGTGCAGGCTTTTACGAAACCAGGATTGCATATTATGCATGGAGGGGAGTTAATGGATATCGCTTTGCTTACATCCCCGATTAC

mRNA sequence

ATGGCATCTAGGCGGAATGTTCGTTACAGCTCCCTTCCCACTGATGATAACGATCTTGATTATGAAGGAAGTCAGTATGACCCTCGCTTTTCTTATACACCCAAATCTTTTGACAAGGTCCCCTGGAAATCCATCGCTCTTGCAATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTTGTATTAAGAGGTCACATGCCAGGAGAGAAATCTCAAGCCTATGGTCTTCTAGCGTTGGGGGTTCTGACCTTCCTCCCAGGCTTTTACGAAACCAGGATTGCATATTATGCATGGAGGGGAGTTAATGGATATCGCTTTGCTTACATCCCCGATTAC

Coding sequence (CDS)

ATGGCATCTAGGCGGAATGTTCGTTACAGCTCCCTTCCCACTGATGATAACGATCTTGATTATGAAGGAAGTCAGTATGACCCTCGCTTTTCTTATACACCCAAATCTTTTGACAAGGTCCCCTGGAAATCCATCGCTCTTGCAATCTTCCTGTTACTTCTTGGATCATTGCTTCTCTTTCTTTCGTACTTTGTATTAAGAGGTCACATGCCAGGAGAGAAATCTCAAGCCTATGGTCTTCTAGCGTTGGGGGTTCTGACCTTCCTCCCAGGCTTTTACGAAACCAGGATTGCATATTATGCATGGAGGGGAGTTAATGGATATCGCTTTGCTTACATCCCCGATTAC

Protein sequence

MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLFLSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY

Homology

[Close]

BLAST of MC04g1724 vs. ExPASy Swiss-Prot
Match: Q5ZLH4 (Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 44/112 (39.29%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 7   VRYSSL-PTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L  TDD  +D +  +  P          K+P+K+IALA+ L ++G+ L+ +   +
Sbjct: 17  VKYSKLASTDDGYIDLQFKKSPP----------KIPYKAIALAVVLFMIGTFLIIIGALL 76

Query: 67  LRGHM-PGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 117
           L G++  G   +A  +L +G+L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LAGYISKGGTDRAIPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of MC04g1724 vs. ExPASy Swiss-Prot
Match: Q96A57 (Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-13
Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 7   VRYSSL-PTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L  TDD  +D +       F  TP    K+P+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQ-------FKKTP---PKIPYKAIALATVLFLIGAFLIIIGSLL 76

Query: 67  LRGHM-PGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 117
           L G++  G   +A  +L +G+L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of MC04g1724 vs. ExPASy Swiss-Prot
Match: Q5R8X3 (Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.6e-13
Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 7   VRYSSL-PTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L  TDD  +D +       F  TP    K+P+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQ-------FKKTP---PKIPYKAIALATGLFLIGAFLIIIGSLL 76

Query: 67  LRGHM-PGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 117
           L G++  G   +A  +L +G+L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAIPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of MC04g1724 vs. ExPASy Swiss-Prot
Match: Q5E975 (Transmembrane protein 230 OS=Bos taurus OX=9913 GN=TMEM230 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.4e-13
Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 7   VRYSSL-PTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L  TDD  +D +  +  P          K+P+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLSSTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGAFLIIIGSLL 76

Query: 67  LRGHM-PGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 117
           L G++  G   +A  +L +G+L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LAGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of MC04g1724 vs. ExPASy Swiss-Prot
Match: Q8CIB6 (Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.4e-13
Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 7   VRYSSL-PTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLFLSYFV 66
           V+YS L  TDD  +D +  +  P          K+P+K+IALA  L L+G+ L+ +   +
Sbjct: 17  VKYSRLASTDDGYIDLQFKKSPP----------KIPYKAIALATVLFLIGTFLIIIGSLL 76

Query: 67  LRGHM-PGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 117
           L G++  G   +A  +L +G+L FLPGFY  RIAYYA +G  GY +  IPD+
Sbjct: 77  LSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYYASKGYRGYSYDDIPDF 118

[Close]

BLAST of MC04g1724 vs. NCBI nr
Match: XP_022133456.1 (transmembrane protein 230 [Momordica charantia])

HSP 1 Score: 236 bits (602), Expect = 2.13e-78
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY
Sbjct: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116

[Close]

BLAST of MC04g1724 vs. NCBI nr
Match: XP_023521905.1 (transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214 bits (545), Expect = 1.05e-69
Identity = 105/116 (90.52%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL  DDNDLDYEGSQYDPRF YTPK+FDK+PWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVL GHM GEKSQAYGLLALG LTFLPGFYETRIAYYAWRG NGYRFA IPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of MC04g1724 vs. NCBI nr
Match: XP_022961740.1 (transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembrane protein 230-like [Cucurbita moschata] >KAG6602515.1 Transmembrane protein 230, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033189.1 Transmembrane protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213 bits (541), Expect = 4.30e-69
Identity = 104/116 (89.66%), Postives = 107/116 (92.24%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL  DDNDLDYEGSQYDPRF YTPK+FDK+PWKSIALA+FLLLLGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVL GHM GEKSQAYGLLALG LTFLPGFYETRIAYYAWRG NGYRFA IPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of MC04g1724 vs. NCBI nr
Match: XP_022990725.1 (transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane protein 230-like [Cucurbita maxima] >XP_022990727.1 transmembrane protein 230-like [Cucurbita maxima])

HSP 1 Score: 209 bits (532), Expect = 1.01e-67
Identity = 103/116 (88.79%), Postives = 107/116 (92.24%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRR+VRYSSL  DDNDLDYEGSQYDPRF YTPK+FDK+PWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVL GHM GEKSQAYGLLALG LTFLPGFYETRIAYYAWRG NGY FA IPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYCFASIPDY 116

[Close]

BLAST of MC04g1724 vs. NCBI nr
Match: XP_008459349.1 (PREDICTED: transmembrane protein 230 [Cucumis melo])

HSP 1 Score: 207 bits (527), Expect = 5.87e-67
Identity = 101/116 (87.07%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRRN+RYSSL +DDND+D EGS++DPRF YTPK+FDK+PWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVL GHM GEKSQAYGLLALG LTFLPGFYETRIAYYAWRG NGYRFA IPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of MC04g1724 vs. ExPASy TrEMBL
Match: A0A6J1BV57 (Transmembrane protein 230 OS=Momordica charantia OX=3673 GN=LOC111006028 PE=3 SV=1)

HSP 1 Score: 236 bits (602), Expect = 1.03e-78
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY
Sbjct: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116

[Close]

BLAST of MC04g1724 vs. ExPASy TrEMBL
Match: A0A6J1HAY7 (Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=1)

HSP 1 Score: 213 bits (541), Expect = 2.08e-69
Identity = 104/116 (89.66%), Postives = 107/116 (92.24%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL  DDNDLDYEGSQYDPRF YTPK+FDK+PWKSIALA+FLLLLGS LLF
Sbjct: 1   MASRRNVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSFLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVL GHM GEKSQAYGLLALG LTFLPGFYETRIAYYAWRG NGYRFA IPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of MC04g1724 vs. ExPASy TrEMBL
Match: A0A6J1JQW3 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1)

HSP 1 Score: 209 bits (532), Expect = 4.91e-68
Identity = 103/116 (88.79%), Postives = 107/116 (92.24%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRR+VRYSSL  DDNDLDYEGSQYDPRF YTPK+FDK+PWKSIALA+FLLLLGSLLLF
Sbjct: 1   MASRRSVRYSSLAADDNDLDYEGSQYDPRFYYTPKAFDKIPWKSIALALFLLLLGSLLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVL GHM GEKSQAYGLLALG LTFLPGFYETRIAYYAWRG NGY FA IPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYCFASIPDY 116

[Close]

BLAST of MC04g1724 vs. ExPASy TrEMBL
Match: A0A1S3C9X7 (Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1)

HSP 1 Score: 207 bits (527), Expect = 2.84e-67
Identity = 101/116 (87.07%), Postives = 108/116 (93.10%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRRN+RYSSL +DDND+D EGS++DPRF YTPK+FDK+PWKSIALAIFLLLLGSLLLF
Sbjct: 1   MASRRNIRYSSLASDDNDVDSEGSRFDPRFYYTPKAFDKIPWKSIALAIFLLLLGSLLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVL GHM GEKSQAYGLLALG LTFLPGFYETRIAYYAWRG NGYRFA IPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of MC04g1724 vs. ExPASy TrEMBL
Match: A0A6J1K312 (Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1)

HSP 1 Score: 207 bits (526), Expect = 4.03e-67
Identity = 101/116 (87.07%), Postives = 106/116 (91.38%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDYEGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLGSLLLF 60
           MASRRNVRYSSL TDDNDLD +G+Q+DPRF YTPK+FDK+PWKSIALAIFLL LGS LLF
Sbjct: 1   MASRRNVRYSSLSTDDNDLDLDGNQFDPRFYYTPKAFDKIPWKSIALAIFLLFLGSFLLF 60

Query: 61  LSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPDY 116
           LSYFVL GHM GEKSQAYGLLALG LTFLPGFYETRIAYYAWRG NGYRFA IPDY
Sbjct: 61  LSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGANGYRFASIPDY 116

[Close]

BLAST of MC04g1724 vs. TAIR 10
Match: AT3G29170.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 166.8 bits (421), Expect = 1.0e-41
Identity = 80/121 (66.12%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 1   MASRRNVRYSSLPTDDNDLDY-----EGSQYDPRFSYTPKSFDKVPWKSIALAIFLLLLG 60
           MASRR+VRY+ LP D++D  Y     E   +DPRF Y+PK+FD+VPWKSIALA+FLL LG
Sbjct: 1   MASRRSVRYAQLPGDEDDEGYGNGVGERRDFDPRFDYSPKAFDRVPWKSIALAVFLLFLG 60

Query: 61  SLLLFLSYFVLRGHMPGEKSQAYGLLALGVLTFLPGFYETRIAYYAWRGVNGYRFAYIPD 117
            LLL LS+F+  GHM G+ SQ Y LL LG+LTFLPGFYETRIAYY+WRG  GYRFA IP 
Sbjct: 61  CLLLLLSFFIFIGHMEGDSSQGYALLVLGILTFLPGFYETRIAYYSWRGAEGYRFAAIPS 120

[Close]

BLAST of MC04g1724 vs. TAIR 10
Match: AT2G19350.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 68.2 bits (165), Expect = 5.1e-12
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 31  SYTPKSFDKVPWKSIALAIFLLLLGSLLLFLSYFVLRGHMPGEKSQAYGLLALGVLTFLP 90
           SYT    ++ P K I+LA+ LL+ G+L + L +F+    + G++      + LG L F+P
Sbjct: 20  SYTVS--NRPPVKEISLAVGLLVFGTLGIVLGFFMAYNRVGGDRGHGIFFIVLGCLLFIP 79

Query: 91  GFYETRIAYYAWRGVNGYRFAYIP 115
           GFY TRIAYYA++G  G+ F+ IP
Sbjct: 80  GFYYTRIAYYAYKGYKGFSFSNIP 101

[Close]

BLAST of MC04g1724 vs. TAIR 10
Match: AT4G29850.1 (Eukaryotic protein of unknown function (DUF872) )

HSP 1 Score: 67.4 bits (163), Expect = 8.7e-12
Identity = 35/84 (41.67%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 31  SYTPKSFDKVPWKSIALAIFLLLLGSLLLFLSYFVLRGHMPGEKSQAYGLLALGVLTFLP 90
           SYT    ++ P K IALA+ LL+ G+L +   +F+    + G++      + LG L F+P
Sbjct: 20  SYTVN--NRPPVKEIALAVALLVFGTLGIVSGFFMAYNRVGGDRGHGIFFIVLGCLLFIP 79

Query: 91  GFYETRIAYYAWRGVNGYRFAYIP 115
           GFY TRIAYYA++G  G+ F+ IP
Sbjct: 80  GFYYTRIAYYAYKGYKGFSFSNIP 101

The following BLAST results are available for this feature:

BLAST of MC04g1724 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZLH4	1.5e-13	39.29	Transmembrane protein 230 OS=Gallus gallus OX=9031 GN=TMEM230 PE=2 SV=1	[more]
Q96A57	1.5e-13	41.96	Transmembrane protein 230 OS=Homo sapiens OX=9606 GN=TMEM230 PE=1 SV=1	[more]
Q5R8X3	2.6e-13	41.96	Transmembrane protein 230 OS=Pongo abelii OX=9601 GN=TMEM230 PE=2 SV=1	[more]
Q5E975	3.4e-13	40.18	Transmembrane protein 230 OS=Bos taurus OX=9913 GN=TMEM230 PE=2 SV=1	[more]
Q8CIB6	3.4e-13	40.18	Transmembrane protein 230 OS=Mus musculus OX=10090 GN=Tmem230 PE=1 SV=1	[more]

BLAST of MC04g1724 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133456.1	2.13e-78	100.00	transmembrane protein 230 [Momordica charantia]	[more]
XP_023521905.1	1.05e-69	90.52	transmembrane protein 230-like [Cucurbita pepo subsp. pepo] >XP_023521962.1 tran...	[more]
XP_022961740.1	4.30e-69	89.66	transmembrane protein 230-like [Cucurbita moschata] >XP_022961747.1 transmembran...	[more]
XP_022990725.1	1.01e-67	88.79	transmembrane protein 230-like [Cucurbita maxima] >XP_022990726.1 transmembrane ...	[more]
XP_008459349.1	5.87e-67	87.07	PREDICTED: transmembrane protein 230 [Cucumis melo]	[more]

BLAST of MC04g1724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BV57	1.03e-78	100.00	Transmembrane protein 230 OS=Momordica charantia OX=3673 GN=LOC111006028 PE=3 SV...	[more]
A0A6J1HAY7	2.08e-69	89.66	Transmembrane protein 230 OS=Cucurbita moschata OX=3662 GN=LOC111462418 PE=3 SV=...	[more]
A0A6J1JQW3	4.91e-68	88.79	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111487526 PE=3 SV=1	[more]
A0A1S3C9X7	2.84e-67	87.07	Transmembrane protein 230 OS=Cucumis melo OX=3656 GN=LOC103498508 PE=3 SV=1	[more]
A0A6J1K312	4.03e-67	87.07	Transmembrane protein 230 OS=Cucurbita maxima OX=3661 GN=LOC111489607 PE=3 SV=1	[more]

BLAST of MC04g1724 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29170.1	1.0e-41	66.12	Eukaryotic protein of unknown function (DUF872)	[more]
AT2G19350.1	5.1e-12	41.67	Eukaryotic protein of unknown function (DUF872)	[more]
AT4G29850.1	8.7e-12	41.67	Eukaryotic protein of unknown function (DUF872)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008590	Transmembrane protein 230/134	PFAM	PF05915	DUF872	coord: 39..116 e-value: 7.8E-25 score: 87.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR15664:SF0	TRANSMEMBRANE PROTEIN 230	coord: 1..116
IPR044234	Transmembrane protein 230	PANTHER	PTHR15664	C20ORF30 PROTEIN	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1724.1	MC04g1724.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005776	autophagosome
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane