MC04g1616 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1616
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	cyclin-dependent protein kinase inhibitor SMR6-like
Location	MC04: 23693200 .. 23693505 (-)
RNA-Seq Expression	MC04g1616
Synteny	MC04g1616

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTCTCGAAGAAGTCCCAAATCGACGAATCGGAGGGGAAAAAATGGGTAATCGCCGGGTTGCCGCCGAGAGCGTCGTTGAAGCCGATAAAGACGAAATCGAGGGCGAAACACGGCGACGGCGACGGCGACGACGGCGAGAAGTCGTGTTCGACAACGCCGACGGCGAAGGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGCCGGCGCCGAGGAAGCGCAGATCTCTAAAATCGAGCTCTAATCATGTCAGGGAGTTCTTTAATCCTCCAGATTTAGAATCTGTCTTCAAGCTCCGAGTT

mRNA sequence

ATGGGGTTCTCGAAGAAGTCCCAAATCGACGAATCGGAGGGGAAAAAATGGGTAATCGCCGGGTTGCCGCCGAGAGCGTCGTTGAAGCCGATAAAGACGAAATCGAGGGCGAAACACGGCGACGGCGACGGCGACGACGGCGAGAAGTCGTGTTCGACAACGCCGACGGCGAAGGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGCCGGCGCCGAGGAAGCGCAGATCTCTAAAATCGAGCTCTAATCATGTCAGGGAGTTCTTTAATCCTCCAGATTTAGAATCTGTCTTCAAGCTCCGAGTT

Coding sequence (CDS)

ATGGGGTTCTCGAAGAAGTCCCAAATCGACGAATCGGAGGGGAAAAAATGGGTAATCGCCGGGTTGCCGCCGAGAGCGTCGTTGAAGCCGATAAAGACGAAATCGAGGGCGAAACACGGCGACGGCGACGGCGACGACGGCGAGAAGTCGTGTTCGACAACGCCGACGGCGAAGGAAGCGAGAATACCGGAGAAACTGAGTTGCCCGCCGGCGCCGAGGAAGCGCAGATCTCTAAAATCGAGCTCTAATCATGTCAGGGAGTTCTTTAATCCTCCAGATTTAGAATCTGTCTTCAAGCTCCGAGTT

Protein sequence

MGFSKKSQIDESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVREFFNPPDLESVFKLRV

Homology

[Close]

BLAST of MC04g1616 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-25
Identity = 70/111 (63.06%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRA-----KHGDGDGDDGEKSCS 60
           MGFSKKSQ +   ES+GKKWVIAG+  RASLKP+KTK RA        + D  + E+ CS
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  TTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHVREFFNPP-DLESVFKLR 102
           TTPTAKE +IPE L CPPAPRKRR +LK  SN VREFF PP DLE+VF  R
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKCRSNVVREFFTPPSDLETVFLRR 111

[Close]

BLAST of MC04g1616 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.6e-14
Identity = 50/108 (46.30%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 1   MGFSKKS--QIDE-----SEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCST 60
           MGFS K+  Q D      +EGKK VI G+   +++KPI   S A     D    E  C T
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTED----EDLCPT 60

Query: 61  TPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVREFFNPPDLESVFKLR 102
           TPTA   RIP  + CPPAP+KR+     S   REFF+PPDLE+VF  R
Sbjct: 61  TPTADSVRIPTVIPCPPAPKKRKLTLKVSYGPREFFSPPDLETVFIYR 104

[Close]

BLAST of MC04g1616 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-12
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 1   MGFSKK--SQID-----ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCST 60
           MG+S K   Q+D      ++GKKWVIAG+P R+ LK I         + +  D    C T
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEEQD---QCPT 60

Query: 61  TPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHV-REFFNPPDLESVF 99
           TPTA   RIP    CP AP+KR+ SLK S   V R++F+PPDLE+VF
Sbjct: 61  TPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of MC04g1616 vs. ExPASy Swiss-Prot
Match: Q9LVX6 (Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 GN=SMR7 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.1e-10
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 1  MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
          MG SKKSQ+    +++GKK++ A    RASLKP+KTK      + + +DG      TPTA
Sbjct: 1  MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTK--LIKPERESEDG---ICITPTA 60

Query: 61 KEARIPEKLSCPPAPRKRRSLKSSSNHVR-EFFNPP-DLESVF 99
          + A+ PE   CP APRKR  +    N++R E+F PP D E VF
Sbjct: 61 RGAKTPE---CPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

[Close]

BLAST of MC04g1616 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 8.8e-05
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 54  TPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVRE--FFNPPDLESVF 99
           TP AK++RIPE L+CPPAP+K+R  K+     R+  FF PP++E  F
Sbjct: 56  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of MC04g1616 vs. NCBI nr
Match: XP_023550994.1 (cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160 bits (405), Expect = 9.09e-49
Identity = 90/107 (84.11%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFSKKSQID   E EGKKWVIAGLP R+SLKPI TKSRAK GD   DDGEKS STTPTA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKDGD---DDGEKSRSTTPTA 60

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKLSCP APRKRRSLKSSSN  H REFFNPPDLESVFK+RV
Sbjct: 61  KEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of MC04g1616 vs. NCBI nr
Match: KAG6578666.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159 bits (401), Expect = 3.70e-48
Identity = 89/107 (83.18%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFSKKSQID   E EGKKWVIAGLP R+SLKPI TKSRAK G+   DDGEKS STTPTA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKDGE---DDGEKSRSTTPTA 60

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKLSCP APRKRRSLKSSSN  H REFFNPPDLESVFK+RV
Sbjct: 61  KEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of MC04g1616 vs. NCBI nr
Match: KAG7016206.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159 bits (401), Expect = 6.90e-48
Identity = 89/107 (83.18%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFSKKSQID   E EGKKWVIAGLP R+SLKPI TKSRAK G+   DDGEKS STTPTA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKSRAKDGE---DDGEKSRSTTPTA 60

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKLSCP APRKRRSLKSSSN  H REFFNPPDLESVFK+RV
Sbjct: 61  KEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of MC04g1616 vs. NCBI nr
Match: XP_022993176.1 (cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita maxima])

HSP 1 Score: 156 bits (395), Expect = 3.04e-47
Identity = 88/107 (82.24%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFSKKSQID   E+EGKKWVIAGLP R+SLKPI TKSRAK G+   DD EKS STTPTA
Sbjct: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGE---DDCEKSRSTTPTA 60

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKLSCP APRKRRSLKSSSN  H REFFNPPDLESVFK+RV
Sbjct: 61  KEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of MC04g1616 vs. NCBI nr
Match: XP_022939509.1 (cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita moschata])

HSP 1 Score: 154 bits (390), Expect = 1.76e-46
Identity = 87/107 (81.31%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFSKKSQID   E EGKKWVIAGLP R+SLKPI TK RAK G+   DDGEKS STTPTA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKPRAKDGE---DDGEKSHSTTPTA 60

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKL CP APRKRRSLKSSSN  H REFFNPPDLESVFK+RV
Sbjct: 61  KEARIPEKLICPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of MC04g1616 vs. ExPASy TrEMBL
Match: A0A6J1JVL3 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 GN=LOC111489273 PE=4 SV=1)

HSP 1 Score: 156 bits (395), Expect = 1.47e-47
Identity = 88/107 (82.24%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFSKKSQID   E+EGKKWVIAGLP R+SLKPI TKSRAK G+   DD EKS STTPTA
Sbjct: 1   MGFSKKSQIDGGLEAEGKKWVIAGLPARSSLKPISTKSRAKDGE---DDCEKSRSTTPTA 60

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKLSCP APRKRRSLKSSSN  H REFFNPPDLESVFK+RV
Sbjct: 61  KEARIPEKLSCPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of MC04g1616 vs. ExPASy TrEMBL
Match: A0A6J1FHD8 (cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=LOC111445393 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 8.52e-47
Identity = 87/107 (81.31%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFSKKSQID   E EGKKWVIAGLP R+SLKPI TK RAK G+   DDGEKS STTPTA
Sbjct: 1   MGFSKKSQIDGGFEPEGKKWVIAGLPARSSLKPITTKPRAKDGE---DDGEKSHSTTPTA 60

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKL CP APRKRRSLKSSSN  H REFFNPPDLESVFK+RV
Sbjct: 61  KEARIPEKLICPAAPRKRRSLKSSSNQNHGREFFNPPDLESVFKIRV 104

[Close]

BLAST of MC04g1616 vs. ExPASy TrEMBL
Match: A0A6J1JPL5 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 GN=LOC111487749 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 9.11e-43
Identity = 81/107 (75.70%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFS KSQID   E+E KKWVIAG P R+SLK I TK + K GD   DDGE+SCSTTPTA
Sbjct: 6   MGFSNKSQIDGGFEAETKKWVIAGFPARSSLKQINTKPKVKDGD---DDGERSCSTTPTA 65

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKLSCPPAPRKRRS K SSN  HVREFF P DLESVFKL V
Sbjct: 66  KEARIPEKLSCPPAPRKRRSRKLSSNQNHVREFFQPSDLESVFKLLV 109

[Close]

BLAST of MC04g1616 vs. ExPASy TrEMBL
Match: A0A0A0KUE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523070 PE=4 SV=1)

HSP 1 Score: 143 bits (361), Expect = 1.98e-42
Identity = 80/107 (74.77%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFSKKSQID   E E KKWVIAGL  R+SLKPI TKS+ K G+ DGD        TPT 
Sbjct: 1   MGFSKKSQIDTGFEPEPKKWVIAGLSARSSLKPINTKSKTKEGEDDGD-------KTPTG 60

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKL CPPAPRKRRSLKSSSN  H+REFFNPPDLESVFKLRV
Sbjct: 61  KEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of MC04g1616 vs. ExPASy TrEMBL
Match: A0A5D3BY33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00180 PE=4 SV=1)

HSP 1 Score: 142 bits (359), Expect = 4.00e-42
Identity = 81/107 (75.70%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
           MGFSKKSQID   E+E KKWVIAGL  R+SLKPI TKS+ K G+   +DGEK    TPT 
Sbjct: 1   MGFSKKSQIDSGFEAEQKKWVIAGLSARSSLKPINTKSKTKEGE---EDGEK----TPTG 60

Query: 61  KEARIPEKLSCPPAPRKRRSLKSSSN--HVREFFNPPDLESVFKLRV 102
           KEARIPEKL CPPAPRKRRSLKSSSN  H+REFFNPPDLESVFKLRV
Sbjct: 61  KEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV 100

[Close]

BLAST of MC04g1616 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 117.1 bits (292), Expect = 8.4e-27
Identity = 70/111 (63.06%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 1   MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRA-----KHGDGDGDDGEKSCS 60
           MGFSKKSQ +   ES+GKKWVIAG+  RASLKP+KTK RA        + D  + E+ CS
Sbjct: 1   MGFSKKSQFEGGLESDGKKWVIAGISIRASLKPVKTKLRAPPEIVTEVEEDCYNEEEECS 60

Query: 61  TTPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHVREFFNPP-DLESVFKLR 102
           TTPTAKE +IPE L CPPAPRKRR +LK  SN VREFF PP DLE+VF  R
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKCRSNVVREFFTPPSDLETVFLRR 111

[Close]

BLAST of MC04g1616 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 2.5e-15
Identity = 50/108 (46.30%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 1   MGFSKKS--QIDE-----SEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCST 60
           MGFS K+  Q D      +EGKK VI G+   +++KPI   S A     D    E  C T
Sbjct: 1   MGFSGKTYHQFDRKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTED----EDLCPT 60

Query: 61  TPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVREFFNPPDLESVFKLR 102
           TPTA   RIP  + CPPAP+KR+     S   REFF+PPDLE+VF  R
Sbjct: 61  TPTADSVRIPTVIPCPPAPKKRKLTLKVSYGPREFFSPPDLETVFIYR 104

[Close]

BLAST of MC04g1616 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 1.4e-13
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 1   MGFSKK--SQID-----ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCST 60
           MG+S K   Q+D      ++GKKWVIAG+P R+ LK I         + +  D    C T
Sbjct: 1   MGYSGKPHHQLDGEIRESTDGKKWVIAGIPSRSPLKQINLSPGVTVTETEEQD---QCPT 60

Query: 61  TPTAKEARIPEKLSCPPAPRKRR-SLKSSSNHV-REFFNPPDLESVF 99
           TPTA   RIP    CP AP+KR+ SLK S   V R++F+PPDLE+VF
Sbjct: 61  TPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of MC04g1616 vs. TAIR 10
Match: AT3G27630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40460.1); Has 36 Blast hits to 36 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 2.9e-11
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 1  MGFSKKSQID---ESEGKKWVIAGLPPRASLKPIKTKSRAKHGDGDGDDGEKSCSTTPTA 60
          MG SKKSQ+    +++GKK++ A    RASLKP+KTK      + + +DG      TPTA
Sbjct: 1  MGISKKSQVSRELDTDGKKFIFAKTSIRASLKPVKTK--LIKPERESEDG---ICITPTA 60

Query: 61 KEARIPEKLSCPPAPRKRRSLKSSSNHVR-EFFNPP-DLESVF 99
          + A+ PE   CP APRKR  +    N++R E+F PP D E VF
Sbjct: 61 RGAKTPE---CPAAPRKRPPVLKCQNNIRIEYFVPPSDFELVF 95

[Close]

BLAST of MC04g1616 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 6.2e-06
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 54  TPTAKEARIPEKLSCPPAPRKRRSLKSSSNHVRE--FFNPPDLESVF 99
           TP AK++RIPE L+CPPAP+K+R  K+     R+  FF PP++E  F
Sbjct: 56  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

The following BLAST results are available for this feature:

BLAST of MC04g1616 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q29Q81	1.2e-25	63.06	Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q1G3Y4	3.6e-14	46.30	Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SAD3	2.0e-12	45.79	Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9LVX6	4.1e-10	44.66	Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 G...	[more]
F4IWB3	8.8e-05	51.06	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MC04g1616 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550994.1	9.09e-49	84.11	cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo]	[more]
KAG6578666.1	3.70e-48	83.18	Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma ...	[more]
KAG7016206.1	6.90e-48	83.18	Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma ...	[more]
XP_022993176.1	3.04e-47	82.24	cyclin-dependent protein kinase inhibitor SMR6-like [Cucurbita maxima]	[more]
XP_022939509.1	1.76e-46	81.31	cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita moschata]	[more]

BLAST of MC04g1616 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVL3	1.47e-47	82.24	cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1FHD8	8.52e-47	81.31	cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JPL5	9.11e-43	75.70	cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A0A0KUE2	1.98e-42	74.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523070 PE=4 SV=1	[more]
A0A5D3BY33	4.00e-42	75.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MC04g1616 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40460.1	8.4e-27	63.06	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G60783.1	2.5e-15	46.30	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10690.1	1.4e-13	45.79	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G27630.1	2.9e-11	44.66	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G20898.1	6.2e-06	51.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..86
None	No IPR available	PANTHER	PTHR33142:SF40	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR6-RELATED	coord: 1..102
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1616.1	MC04g1616.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045839	negative regulation of mitotic nuclear division
biological_process	GO:0016310	phosphorylation
biological_process	GO:0032875	regulation of DNA endoreduplication
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016301	kinase activity