MC04g1559 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1559
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	CASP-like protein
Location	MC04: 23345010 .. 23347225 (-)
RNA-Seq Expression	MC04g1559
Synteny	MC04g1559

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAATTAAGAGAGCGATGACAAATTTAAATTAAGGGAAAAAAAAGGTACAAGTTGCTTGTTTTAAAACATATTGAAGTCCGCCATAAGATAAAGAATAATTGGCCTAGAAAAATACCAAGTCTATTAGGCTGTTTCTTTGTTTTTGTTGCATATTAGAAAATATAAATATATCTTCACACACGGTTTTACTTTTTAATTATATATATATATATATATATAGAAGCAAAAGCGATTGGATTTGCGCAAAAATTTGAAGATTATCAGAGTTTTGAAGGGAGAGATGGCAGCCTCGAAAGGTTCAAGAATTGCTTCACTTATATTAAGAATTCTGACTTTTGTTTTGATCTTCATTTCTCTGTTAATCATCGCCACCAATTCTAAAACCGTGCTCAAAGGAACTGAAGCCGAAGCAAAAGTTGAGTTTAAAGATGTTTATTCCTATCGGTAAGCAATCAATAATTCTTCACTAATTTTTTTTCTTTCTTTCTTTCTTTTTGAAATTAATCTATAAGTGATGATCTTGATTATGTTTTTATAATTAGTTAAAATTATGTGAAGGTACTTGACGGCAGCTGCTGTTATAGGAGCTGCTTTGAGTTTGTTGCAAATTGCTCTCACCCTTTACCATGTCGTTACCAAAAGTGATGGAACTCCCTTCTTCGATATGTTCAGTGATAAGGTATTTTTTCTTAATCCATAGGATTTTGATTAATTTCTCAGGTGTGGGATGTTCAACCTCATTTCCTCTTTTCTTGATAAGTTTTTCATTCGGTCTCTTCAAAAATATTTGAATTCTTAACCAAATTTCATAAAAGAAATTAAACTTACTAGTTTTCTTAATTTGACTTAACTTTTGAAAATATTTATCCTATCAAGATAAATGAAGATACAATACAATGTTTTTAAGTTTAATTTTTATAGACGGAAATTAAAAATGAAATTATTTTCAACAATCTTAAGCATGAATAAACCACCACTATTTTGATATCTAATACAAAACTTAACAAGTGGAAATCATAATAAATGAATAAATCGTCGCTCAATTCAAAAGTTTAAGTAGATAGATTTGATAAATTTAACTCATATATTAAATATCTAATACTCCTCTTATTAGTGTTTAAAGAGTATTAGCATCAGGGATCCTCAAACAAACAAAGGAGTATTAGTATTTAGTATAATAATAATTAAGAAGAAAAATTTCATTCATATGAGACAGTTAATTTTGTTTTATTTAGTTGAGCGAATTTAATTTTGTTTATTAGTTCCTGGATTTTGACGTTATACTATGAATAATTATCATATAAAATATCGAAAATAGAGCAACAAATTGATGAAAAGGAAAGTGCCGTGGGGATAAGAGCTGAGTGTGTGTAGGGTCGTTGACTTCAATTTTTCGATTTCTTCCACATATTCCCTTCAAGAAATAGGGATACAATATTAGAAAAAATATATTTCTATCTAAAAAAGTTTTATCTTTCTCGGGTGTGTGTCTTTTTCTGTTTTATTTGTCAACTGAAAAGAAATAGAAATATAATTCCATTTATTATTTTTAAATTTTATTTCAAAGAAACTCAAATGTTTTACGAGAAAATTTTGATTTATTTTCTTTAAATTAATTGAAATTATATGCAATCTTTTACCTTATGCATTGATTTGAGTGGAAGAAACAAAAAAATAAATAAATTCGTATATAGTTTTTAGAACATTGACGAAATATTATTTATTCATATCATCAGAAACAAGAAATATAAATGTTATCAAACATAACTAACGCGAGTTTGTATACAGCTCTTGACGTACCTTTTATTATCGGGCGCCTCGGCGGGACTGGGCGCTGGAATCGATCTGAGATCGAACTATAAAGATCTAGTTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAGTGCCTCAGCTGCTATTCTTCTCCTTGCCTTTATTTGCAGTGCCGTCGTCTCTATTCTCTCTTCCTTGGCCCTCGTCAGAAAACCCTAATTAATTTTCATTTCTTCCATTTTAATTTCCATAAAGCTTTTTTTTTTCTTTCTTTTGGTTTGTGTTTAAACATTTGTAATGTTGGAGTGCATTTGCTGAATTATGTATTTAACCCCTCTTCTATAATATATGTTAGTGCTATGGTTTAGCTTGTTTATTATTTAAATTATCAATTGTTTGCCATCATCCTACATCAAATCTCGATTTAATGCTTTAAC

mRNA sequence

ATTTAATTAAGAGAGCGATGACAAATTTAAATTAAGGGAAAAAAAAGAAGCAAAAGCGATTGGATTTGCGCAAAAATTTGAAGATTATCAGAGTTTTGAAGGGAGAGATGGCAGCCTCGAAAGGTTCAAGAATTGCTTCACTTATATTAAGAATTCTGACTTTTGTTTTGATCTTCATTTCTCTGTTAATCATCGCCACCAATTCTAAAACCGTGCTCAAAGGAACTGAAGCCGAAGCAAAAGTTGAGTTTAAAGATGTTTATTCCTATCGGTACTTGACGGCAGCTGCTGTTATAGGAGCTGCTTTGAGTTTGTTGCAAATTGCTCTCACCCTTTACCATGTCGTTACCAAAAGTGATGGAACTCCCTTCTTCGATATGTTCAGTGATAAGCTCTTGACGTACCTTTTATTATCGGGCGCCTCGGCGGGACTGGGCGCTGGAATCGATCTGAGATCGAACTATAAAGATCTAGTTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAGTGCCTCAGCTGCTATTCTTCTCCTTGCCTTTATTTGCAGTGCCGTCGTCTCTATTCTCTCTTCCTTGGCCCTCGTCAGAAAACCCTAATTAATTTTCATTTCTTCCATTTTAATTTCCATAAAGCTTTTTTTTTTCTTTCTTTTGGTTTGTGTTTAAACATTTGTAATGTTGGAGTGCATTTGCTGAATTATGTATTTAACCCCTCTTCTATAATATATGTTAGTGCTATGGTTTAGCTTGTTTATTATTTAAATTATCAATTGTTTGCCATCATCCTACATCAAATCTCGATTTAATGCTTTAAC

Coding sequence (CDS)

ATGGCAGCCTCGAAAGGTTCAAGAATTGCTTCACTTATATTAAGAATTCTGACTTTTGTTTTGATCTTCATTTCTCTGTTAATCATCGCCACCAATTCTAAAACCGTGCTCAAAGGAACTGAAGCCGAAGCAAAAGTTGAGTTTAAAGATGTTTATTCCTATCGGTACTTGACGGCAGCTGCTGTTATAGGAGCTGCTTTGAGTTTGTTGCAAATTGCTCTCACCCTTTACCATGTCGTTACCAAAAGTGATGGAACTCCCTTCTTCGATATGTTCAGTGATAAGCTCTTGACGTACCTTTTATTATCGGGCGCCTCGGCGGGACTGGGCGCTGGAATCGATCTGAGATCGAACTATAAAGATCTAGTTGGCAACATTTTCAACTCATTTTTCGACAAGGGCAGTGCCTCAGCTGCTATTCTTCTCCTTGCCTTTATTTGCAGTGCCGTCGTCTCTATTCTCTCTTCCTTGGCCCTCGTCAGAAAACCCTAA

Protein sequence

MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP

Homology

[Close]

BLAST of MC04g1559 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-28
Identity = 76/164 (46.34%), Postives = 112/164 (68.29%), Query Frame = 0


Query: 4   SKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVI 63
           S  SR+A+LILRILTF+ +  SL+I+ TN+ T L+    E KV FKDVY+YRY+ A  VI
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTAT-LELDLVEVKVHFKDVYAYRYMLATIVI 66

Query: 64  GAALSLLQIALTLYHVVT-----KSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSN 123
           G A ++LQIA TLY+V T       DG   FD F DK+++Y+L++GA+AG  +  D++  
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPV 126

Query: 124 YKDLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
           +       F++F +KG ASA++LL+ F+C+AV+S+ SS AL ++
Sbjct: 127 FSG--SGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYALPKQ 167

[Close]

BLAST of MC04g1559 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-26
Identity = 74/167 (44.31%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 2   AASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAA 61
           A S  SR+ +L LR+LTF  + +SL+I+ TN+ T+  G + E KV  KD YSYRY+ AA 
Sbjct: 14  APSMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGID-EFKVRSKDFYSYRYMLAAI 73

Query: 62  VIGAALSLLQIALTLYHV------VTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDL 121
             G   ++LQIALTL H+       T  DG   FD + DK+++Y+L +GA+A  GA  +L
Sbjct: 74  AFGLTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKEL 133

Query: 122 RSNYKDLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
           ++    L G   + FF+KG ASA++LLL F+C+A++S+ SS AL +K
Sbjct: 134 KTQLAGLGG---DKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of MC04g1559 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.9e-24
Identity = 72/168 (42.86%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 2   AASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVE--FKDVYSYRYLTA 61
           ++S GSR   L+LR+LTFV + I+L++IA     ++K T+ E  VE  F D+Y+YRY+ +
Sbjct: 12  SSSTGSRTVLLLLRVLTFVFLLIALILIA-----IVKQTDDETGVEIKFNDIYAYRYMIS 71

Query: 62  AAVIGAALSLLQIALTLYHVVT-----KSDGTPFFDMFSDKLLTYLLLSGASAGLGAGID 121
             +IG A +LLQ+AL+++ VV+       DG   FD F DK+++YLL+SG++AG G  ++
Sbjct: 72  TIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVE 131

Query: 122 LRSNYKDLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
           L        G   NSF DK +ASA++LL+AF+ +AV S  +S AL +K
Sbjct: 132 LGR------GVPSNSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of MC04g1559 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 65/161 (40.37%), Postives = 103/161 (63.98%), Query Frame = 0


Query: 8   RIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAAL 67
           ++  L+LR+LT V + I+L+I++TNS T++    A  K  FKDVY+YRY+ +AAVIG   
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSA-LKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTLYHVVT--KSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDLVG- 127
           +++Q+  T+    T  K+      D + DKL++YL+ +G++AG G   DL+  +  LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
              +  + FF KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of MC04g1559 vs. ExPASy Swiss-Prot
Match: D7LD59 (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.7e-21
Identity = 64/161 (39.75%), Postives = 105/161 (65.22%), Query Frame = 0


Query: 8   RIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAAL 67
           +++ L+LR+LT V + I+L+I++TNS T++    A  K  FKDVY+YRY+ +AAVIG   
Sbjct: 14  KVSLLLLRVLTGVFLVIALIILSTNSVTIVSQGSA-LKFHFKDVYAYRYMLSAAVIGLLY 73

Query: 68  SLLQIALTLYHVVT--KSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDLVG- 127
           +++Q+  T+    T  K+      D + DKL++YL+ +G++AG G   DL+  +  LV  
Sbjct: 74  AVIQLFFTISEFATGMKNPFNYQLDFYGDKLISYLVATGSAAGFGVSKDLKDAFIALVAL 133

Query: 128 ---NIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
              +  + FF +G ASA++LL +FIC AV+S+ SSLA+ ++
Sbjct: 134 DSTDPVDKFFSRGYASASLLLFSFICLAVLSVFSSLAIAKR 173

[Close]

BLAST of MC04g1559 vs. NCBI nr
Match: XP_022134193.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 294 bits (752), Expect = 9.46e-100
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120
           AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of MC04g1559 vs. NCBI nr
Match: XP_038877614.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 251 bits (641), Expect = 7.56e-83
Identity = 133/161 (82.61%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 3   ASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAV 62
           ASKGSRIASLILRILTF+LIF++LLIIATNSKTVL+GT  E K+EFKDV SYRYL A AV
Sbjct: 2   ASKGSRIASLILRILTFILIFVALLIIATNSKTVLEGTVNETKIEFKDVNSYRYLVAVAV 61

Query: 63  IGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDL 122
           IG ALSLLQIA T+YH+VTK DGTP FD+FSDKLL+YLLLSGASAGLGAGID+R N+K+L
Sbjct: 62  IGGALSLLQIAFTIYHLVTKGDGTPLFDLFSDKLLSYLLLSGASAGLGAGIDMRVNFKEL 121

Query: 123 VGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           VGN FNSFFDKGSA+AAILLLAFIC+A+VSILSSLAL+RKP
Sbjct: 122 VGNFFNSFFDKGSAAAAILLLAFICAAIVSILSSLALIRKP 162

[Close]

BLAST of MC04g1559 vs. NCBI nr
Match: XP_022990642.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 229 bits (584), Expect = 3.75e-74
Identity = 127/163 (77.91%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISLLI ATNSKT+ KG E E K +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120
            +IGA LSLLQIAL +Y+VVTKS  T  FDMFSDKLL+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           +LVGN+ NSF DKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MC04g1559 vs. NCBI nr
Match: XP_023525049.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228 bits (582), Expect = 7.57e-74
Identity = 126/163 (77.30%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISL+I ATNSKT  KG + E K +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAQNETKFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120
            +IGA LSLLQIAL +Y+VVTKS  T  FDMFSDKLL+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  MIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           +LVGN+ NSFFDKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MC04g1559 vs. NCBI nr
Match: XP_022954145.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 228 bits (581), Expect = 1.07e-73
Identity = 127/163 (77.91%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISL+I ATNSKT  KG E E   +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120
            VIGA LSLLQIAL +Y+VVTKS  T  FDMFSDKLL+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           +LVGN+ NSFFDKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MC04g1559 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 294 bits (752), Expect = 4.58e-100
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120
           AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of MC04g1559 vs. ExPASy TrEMBL
Match: A0A6J1JJD2 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1)

HSP 1 Score: 229 bits (584), Expect = 1.82e-74
Identity = 127/163 (77.91%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISLLI ATNSKT+ KG E E K +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120
            +IGA LSLLQIAL +Y+VVTKS  T  FDMFSDKLL+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           +LVGN+ NSF DKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MC04g1559 vs. ExPASy TrEMBL
Match: A0A6J1GRM4 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1)

HSP 1 Score: 228 bits (581), Expect = 5.20e-74
Identity = 127/163 (77.91%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           M  SKGSRIASLILRILTF+LIFISL+I ATNSKT  KG E E   +FKDVYSYRYL + 
Sbjct: 1   MEGSKGSRIASLILRILTFILIFISLIINATNSKTFNKGAENETTFKFKDVYSYRYLIST 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120
            VIGA LSLLQIAL +Y+VVTKS  T  FDMFSDKLL+YLLLSGASAGLGAGIDLR   K
Sbjct: 61  TVIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           +LVGN+ NSFFDKG+ASAA+LLLAFIC+AVVSILSSLAL+RKP
Sbjct: 121 ELVGNLLNSFFDKGNASAAVLLLAFICAAVVSILSSLALIRKP 163

[Close]

BLAST of MC04g1559 vs. ExPASy TrEMBL
Match: A0A6J1HET3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1)

HSP 1 Score: 227 bits (579), Expect = 1.05e-73
Identity = 120/163 (73.62%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           MAASKGSRIASLILRILTF+LIFISL+I ATNSKT+ KGTE EAK+EFK+VYSYRYL AA
Sbjct: 1   MAASKGSRIASLILRILTFILIFISLIINATNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120
           AVIG  LSL+QI L++YH+VTKS+GTP F +FSD LL+YLLLS +SA LGAGID+R+N K
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDMRANLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           +L G +F+SFFD+GS +AA+L +AF+C+AVVSILS+LAL+RKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLFIAFVCAAVVSILSALALIRKP 163

[Close]

BLAST of MC04g1559 vs. ExPASy TrEMBL
Match: A0A6J1JSF8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1)

HSP 1 Score: 223 bits (568), Expect = 4.96e-72
Identity = 119/163 (73.01%), Postives = 145/163 (88.96%), Query Frame = 0


Query: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60
           MAASKGSRIA+LILRILT +LIFISL+I A+NSKT+ KGTE EAK+EFK+VYSYRYL AA
Sbjct: 1   MAASKGSRIATLILRILTLILIFISLIINASNSKTLNKGTENEAKLEFKNVYSYRYLIAA 60

Query: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120
           AVIG  LSL+QI L++YH+VTKS+GTP F +FSD LL+YLLLS +SA LGAGID R+N K
Sbjct: 61  AVIGGVLSLIQIILSIYHMVTKSEGTPLFYLFSDYLLSYLLLSSSSAALGAGIDTRANLK 120

Query: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163
           +L G +F+SFFD+GS +AA+LL+AFIC+AVVSILS+LAL+RKP
Sbjct: 121 ELFGTLFDSFFDQGSGAAAVLLIAFICAAVVSILSALALIRKP 163

[Close]

BLAST of MC04g1559 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 65/161 (40.37%), Postives = 103/161 (63.98%), Query Frame = 0


Query: 8   RIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAAL 67
           ++  L+LR+LT V + I+L+I++TNS T++    A  K  FKDVY+YRY+ +AAVIG   
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSA-LKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTLYHVVT--KSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDLVG- 127
           +++Q+  T+    T  K+      D + DKL++YL+ +G++AG G   DL+  +  LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 163
              +  + FF KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of MC04g1559 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 102.1 bits (253), Expect = 4.5e-22
Identity = 65/162 (40.12%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 8   RIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGAAL 67
           R   L+LR+LT   + I++++I+TN+ T L+ +    K+ F DVY+YRY+ +AAVIG   
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVT-LEISSTSIKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALTLYHVVTKSDG--TPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDLV-- 127
           +++Q+ LT+    T      T  FD + DK+++YLL +G++AG G   DL+  Y  L+  
Sbjct: 74  AVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEF 133

Query: 128 --GNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 164
              +  + FF KG ASA++LL AF+  AV+S+ SSLAL ++P
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

The following BLAST results are available for this feature:

BLAST of MC04g1559 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	2.4e-28	46.34	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
B9NBE5	1.3e-26	44.31	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
C6T1Z6	7.9e-24	42.86	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q56X75	2.2e-21	40.37	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
D7LD59	3.7e-21	39.75	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of MC04g1559 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134193.1	9.46e-100	100.00	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_038877614.1	7.56e-83	82.61	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_022990642.1	3.75e-74	77.91	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_023525049.1	7.57e-74	77.30	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022954145.1	1.07e-73	77.91	CASP-like protein 4D1 [Cucurbita moschata]	[more]

BLAST of MC04g1559 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1A4	4.58e-100	100.00	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]
A0A6J1JJD2	1.82e-74	77.91	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487466 PE=3 SV=1	[more]
A0A6J1GRM4	5.20e-74	77.91	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456492 PE=3 SV=1	[more]
A0A6J1HET3	1.05e-73	73.62	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463525 PE=3 SV=1	[more]
A0A6J1JSF8	4.96e-72	73.01	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111487423 PE=3 SV=1	[more]

BLAST of MC04g1559 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	1.5e-22	40.37	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	4.5e-22	40.12	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 12..157 e-value: 1.7E-11 score: 42.1
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..147 e-value: 8.0E-26 score: 90.6
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 4..162
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 4..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1559.1	MC04g1559.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding