MC04g1558 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1558
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	CASP-like protein
Location	MC04: 23343048 .. 23343975 (-)
RNA-Seq Expression	MC04g1558
Synteny	MC04g1558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTAGAAGATATCAGAGAAATGGAAGCCACAATCACAATGGGTTCAAAGATTGCTTCTCTTGTGCTCAGAGTTGTCACTTTCGTTTTCCTCTTCATTTCCATCATAGTGTTGGCCACCAATTCCCAAGGCAATATTCATTTCCATAATGTCAATTCCTATAGGTATAATAACTATCCTTCTTAATTTATTTATTTACTTTTTTTTTCTAACGATGTATTTTATTAAGTGATGGAAAGAACTTTGGAATTTTGAAGGTTTGCGATGGCAACCATCATTATTGGAGGTGCATTCAATCTCTTGCAAATTGCCTTGTCCCTTTATTATATCATATCCAAAAGCCACGGCAATCTTTTATTCTATTTCTACGGTGACAAGGTATATAGTAAAGTAATGTTTGAGTATTGTTTTTACAATTTAGTTAGATATTCATTAAATTTATCCGGTCCATGAGTAATGGTTTATTCATCTTAAGATGATATCAGTATGGAATATTCGAATTTGTGTTGTTGTTTCTTCTTCGTTTATCATGATTTCCACTTATTGGGTGGTTAGGTTTTGTCGTACGTTCTGCTGTCGGGAGCTGCGGCGGGACTGGGTGGCGGCATAGATTTGAATGCGAATATTGAAGGGATGGGGTCGTTCTTCGGGAAGGGCAATGCGGCGGCGGCTCTTCTGCTGATTGCGTTTCTTTGCAGTGCTGCCATCTCAATTCTTTCCTCTCTGGCCCTCTCCAACAAACCTAATTAAAAATAAATGTACTCTCTTTTTTACTAGGAAAATTATACCATCTCTTTTTTCTTGATTTATTTTTTGCAATTTACCTTTTAAATTACTTGGCTGTGCGGTATGAGTTTTAGCATTTTCCTTTGCAGAAGAAGTGAAGTAAAGATTTGATTTTGTTTCTCCTTTCACGTGCCAATGAATA

mRNA sequence

CATTTAGAAGATATCAGAGAAATGGAAGCCACAATCACAATGGGTTCAAAGATTGCTTCTCTTGTGCTCAGAGTTGTCACTTTCGTTTTCCTCTTCATTTCCATCATAGTGTTGGCCACCAATTCCCAAGGCAATATTCATTTCCATAATGTCAATTCCTATAGGTTTGCGATGGCAACCATCATTATTGGAGGTGCATTCAATCTCTTGCAAATTGCCTTGTCCCTTTATTATATCATATCCAAAAGCCACGGCAATCTTTTATTCTATTTCTACGGTGACAAGGTTTTGTCGTACGTTCTGCTGTCGGGAGCTGCGGCGGGACTGGGTGGCGGCATAGATTTGAATGCGAATATTGAAGGGATGGGGTCGTTCTTCGGGAAGGGCAATGCGGCGGCGGCTCTTCTGCTGATTGCGTTTCTTTGCAGTGCTGCCATCTCAATTCTTTCCTCTCTGGCCCTCTCCAACAAACCTAATTAAAAATAAATGTACTCTCTTTTTTACTAGGAAAATTATACCATCTCTTTTTTCTTGATTTATTTTTTGCAATTTACCTTTTAAATTACTTGGCTGTGCGGTATGAGTTTTAGCATTTTCCTTTGCAGAAGAAGTGAAGTAAAGATTTGATTTTGTTTCTCCTTTCACGTGCCAATGAATA

Coding sequence (CDS)

ATGGAAGCCACAATCACAATGGGTTCAAAGATTGCTTCTCTTGTGCTCAGAGTTGTCACTTTCGTTTTCCTCTTCATTTCCATCATAGTGTTGGCCACCAATTCCCAAGGCAATATTCATTTCCATAATGTCAATTCCTATAGGTTTGCGATGGCAACCATCATTATTGGAGGTGCATTCAATCTCTTGCAAATTGCCTTGTCCCTTTATTATATCATATCCAAAAGCCACGGCAATCTTTTATTCTATTTCTACGGTGACAAGGTTTTGTCGTACGTTCTGCTGTCGGGAGCTGCGGCGGGACTGGGTGGCGGCATAGATTTGAATGCGAATATTGAAGGGATGGGGTCGTTCTTCGGGAAGGGCAATGCGGCGGCGGCTCTTCTGCTGATTGCGTTTCTTTGCAGTGCTGCCATCTCAATTCTTTCCTCTCTGGCCCTCTCCAACAAACCTAATTAA

Protein sequence

MEATITMGSKIASLVLRVVTFVFLFISIIVLATNSQGNIHFHNVNSYRFAMATIIIGGAFNLLQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKGNAAAALLLIAFLCSAAISILSSLALSNKPN

Homology

[Close]

BLAST of MC04g1558 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.0e-25
Identity = 68/158 (43.04%), Postives = 106/158 (67.09%), Query Frame = 0


Query: 6   TMGSKIASLVLRVVTFVFLFISIIVLATNS--------QGNIHFHNVNSYRFAMATIIIG 65
           ++ S++A+L+LR++TF+FL  S+++L TN+        +  +HF +V +YR+ +ATI+IG
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIG 66

Query: 66  GAFNLLQIALSLYYI-----ISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANI 125
            A+ +LQIA +LYY+     +    GNL F F+GDKV+SY+L++GAAAG     D+    
Sbjct: 67  LAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVF 126

Query: 126 EGMG---SFFGKGNAAAALLLIAFLCSAAISILSSLAL 148
            G G   +F  KG A+A+LLLI F+C+A +S+ SS AL
Sbjct: 127 SGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of MC04g1558 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 69/154 (44.81%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 8   GSKIASLVLRVVTFVFLFISIIVLATNSQGN------IHFHNVNSYRFAMATIIIGGAFN 67
           GS+   L+LRV+TFVFL I++I++A   Q +      I F+++ +YR+ ++TIIIG A+N
Sbjct: 16  GSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIGFAYN 75

Query: 68  LLQIALSLYYIIS-----KSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMG 127
           LLQ+ALS++ ++S        G  LF F+GDK++SY+L+SG+AAG G  ++L   +    
Sbjct: 76  LLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGVPS-N 135

Query: 128 SFFGKGNAAAALLLIAFLCSAAISILSSLALSNK 151
           SF  K NA+A+LLLIAFL +A  S  +S AL  K
Sbjct: 136 SFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of MC04g1558 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-21
Identity = 65/161 (40.37%), Postives = 101/161 (62.73%), Query Frame = 0


Query: 6   TMGSKIASLVLRVVTFVFLFISIIVLATNS--------QGNIHFHNVNSYRFAMATIIIG 65
           +M S++ +L LRV+TF FL +S++++ TN+        +  +   +  SYR+ +A I  G
Sbjct: 16  SMVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGIDEFKVRSKDFYSYRYMLAAIAFG 75

Query: 66  GAFNLLQIALSLYYIISKS------HGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNAN 125
             + +LQIAL+L +I  ++       GNL+F FYGDKV+SY+L +GAAA  G   +L   
Sbjct: 76  LTYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQ 135

Query: 126 IEGMG--SFFGKGNAAAALLLIAFLCSAAISILSSLALSNK 151
           + G+G   FF KG A+A+LLL+ F+C+A +S+ SS AL  K
Sbjct: 136 LAGLGGDKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of MC04g1558 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-15
Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 0


Query: 13  SLVLRVVTFVFLFISIIVLATNSQG--------NIHFHNVNSYRFAMATIIIGGAFNLLQ 72
           SL++R++T + L IS IV+ATN+Q          I F +  +YR+ +AT+IIG A+ LLQ
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTVSTVAGDVKIKFKDFYAYRYLIATVIIGMAYTLLQ 73

Query: 73  IALSLYYIISKS----HGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEG---MGS 132
           IA S+  + + +     G LLF FYGDK +SY L++GAAA  G   DL   +EG      
Sbjct: 74  IAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLK-QLEGSDNYSK 133

Query: 133 FFGKGNAAAALLLIAFLCSAAISILSSLALSNK 151
           F    NAAA+L LI F  + A SI SS  L  +
Sbjct: 134 FLNTSNAAASLCLIGFFFAVASSIFSSYNLPKR 165

[Close]

BLAST of MC04g1558 vs. ExPASy Swiss-Prot
Match: D7LD59 (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-15
Identity = 61/164 (37.20%), Postives = 99/164 (60.37%), Query Frame = 0


Query: 10  KIASLVLRVVTFVFLFISIIVLATN-----SQGN---IHFHNVNSYRFAMATIIIGGAFN 69
           K++ L+LRV+T VFL I++I+L+TN     SQG+    HF +V +YR+ ++  +IG    
Sbjct: 14  KVSLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIG---- 73

Query: 70  LLQIALSLYYIIS------KSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLN------ 129
           LL   + L++ IS      K+  N    FYGDK++SY++ +G+AAG G   DL       
Sbjct: 74  LLYAVIQLFFTISEFATGMKNPFNYQLDFYGDKLISYLVATGSAAGFGVSKDLKDAFIAL 133

Query: 130 ---ANIEGMGSFFGKGNAAAALLLIAFLCSAAISILSSLALSNK 151
               + + +  FF +G A+A+LLL +F+C A +S+ SSLA++ +
Sbjct: 134 VALDSTDPVDKFFSRGYASASLLLFSFICLAVLSVFSSLAIAKR 173

[Close]

BLAST of MC04g1558 vs. NCBI nr
Match: XP_022134262.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 272 bits (695), Expect = 2.03e-91
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MEATITMGSKIASLVLRVVTFVFLFISIIVLATNSQGNIHFHNVNSYRFAMATIIIGGAF 60
           MEATITMGSKIASLVLRVVTFVFLFISIIVLATNSQGNIHFHNVNSYRFAMATIIIGGAF
Sbjct: 1   MEATITMGSKIASLVLRVVTFVFLFISIIVLATNSQGNIHFHNVNSYRFAMATIIIGGAF 60

Query: 61  NLLQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFG 120
           NLLQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFG
Sbjct: 61  NLLQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFG 120

Query: 121 KGNAAAALLLIAFLCSAAISILSSLALSNKPN 152
           KGNAAAALLLIAFLCSAAISILSSLALSNKPN
Sbjct: 121 KGNAAAALLLIAFLCSAAISILSSLALSNKPN 152

[Close]

BLAST of MC04g1558 vs. NCBI nr
Match: XP_038877615.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 197 bits (501), Expect = 7.81e-62
Identity = 114/150 (76.00%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQ----GNIHFHNVNSYRFAMATIIIGGAFNL 66
           MGSKIASLVLRVVTFVFL ISIIVLATNS+       HFHNVNSYR+A+ TIIIGGAFNL
Sbjct: 5   MGSKIASLVLRVVTFVFLLISIIVLATNSKTIGDAKFHFHNVNSYRYAITTIIIGGAFNL 64

Query: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126
           LQIAL+LY +++K+ GNLLF FYGDKVLSYVLLSGAAA LG GIDL AN+E + SFF  G
Sbjct: 65  LQIALALYRLVTKTDGNLLFDFYGDKVLSYVLLSGAAAALGSGIDLKANLEVLASFFDHG 124

Query: 127 NAAAALLLIAFLCSAAISILSSLALSNKPN 152
           NA AALLL+AF CSA +S+LSSLALSNK N
Sbjct: 125 NAGAALLLLAFFCSAVVSVLSSLALSNKAN 154

[Close]

BLAST of MC04g1558 vs. NCBI nr
Match: XP_008458887.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 191 bits (484), Expect = 3.02e-59
Identity = 109/150 (72.67%), Postives = 130/150 (86.67%), Query Frame = 0


Query: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQ--GN--IHFHNVNSYRFAMATIIIGGAFNL 66
           M +KIAS VLRV+TFVFL +SIIVL TNS+  GN  +HFHNVNSYR+AMATIIIGGAFNL
Sbjct: 5   MATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGGAFNL 64

Query: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126
           LQIAL+LY +++K+ G++LF FYGDKVLSY LL+GAAA LG  +DL AN++ + SFF +G
Sbjct: 65  LQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSFFDQG 124

Query: 127 NAAAALLLIAFLCSAAISILSSLALSNKPN 152
           NAAAALLL+AFLCSA IS+LSSLALSNKPN
Sbjct: 125 NAAAALLLLAFLCSAIISVLSSLALSNKPN 154

[Close]

BLAST of MC04g1558 vs. NCBI nr
Match: XP_031741109.1 (CASP-like protein 4D1 isoform X1 [Cucumis sativus] >KAE8648540.1 hypothetical protein Csa_007999 [Cucumis sativus])

HSP 1 Score: 190 bits (483), Expect = 4.28e-59
Identity = 112/150 (74.67%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQ--GNI--HFHNVNSYRFAMATIIIGGAFNL 66
           MG+KIAS VLRV+ F FL ISIIVL TNS+  GN   HFHNVNSYRFAMATII+GGAFNL
Sbjct: 5   MGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGGAFNL 64

Query: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126
           LQIALSLY +I+K+ G++LF FYGDK+LSYVLL+GAAA LG  IDL AN+    SFF +G
Sbjct: 65  LQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSFFDQG 124

Query: 127 NAAAALLLIAFLCSAAISILSSLALSNKPN 152
           NAAAALLL+AFLCSA IS+LSSLALSNKPN
Sbjct: 125 NAAAALLLLAFLCSAIISVLSSLALSNKPN 154

[Close]

BLAST of MC04g1558 vs. NCBI nr
Match: XP_023551429.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182 bits (461), Expect = 9.51e-56
Identity = 106/149 (71.14%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQ----GNIHFHNVNSYRFAMATIIIGGAFNL 66
           MG+KIAS VLRV+TFVFL ISIIVL T S+      + FHNVNSYRFAMATIIIGGAFNL
Sbjct: 5   MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDDKVQFHNVNSYRFAMATIIIGGAFNL 64

Query: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126
           LQIAL+LY +I+K+ G +LF F+GDKVLSY LL+GAAA LG  IDL ANI+ + SFF +G
Sbjct: 65  LQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSFFDQG 124

Query: 127 NAAAALLLIAFLCSAAISILSSLALSNKP 151
           NAAAALLL+AFLCSA +S+LSS ALS+KP
Sbjct: 125 NAAAALLLLAFLCSAVVSVLSSFALSHKP 153

[Close]

BLAST of MC04g1558 vs. ExPASy TrEMBL
Match: A0A6J1BZ60 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1)

HSP 1 Score: 272 bits (695), Expect = 9.85e-92
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MEATITMGSKIASLVLRVVTFVFLFISIIVLATNSQGNIHFHNVNSYRFAMATIIIGGAF 60
           MEATITMGSKIASLVLRVVTFVFLFISIIVLATNSQGNIHFHNVNSYRFAMATIIIGGAF
Sbjct: 1   MEATITMGSKIASLVLRVVTFVFLFISIIVLATNSQGNIHFHNVNSYRFAMATIIIGGAF 60

Query: 61  NLLQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFG 120
           NLLQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFG
Sbjct: 61  NLLQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFG 120

Query: 121 KGNAAAALLLIAFLCSAAISILSSLALSNKPN 152
           KGNAAAALLLIAFLCSAAISILSSLALSNKPN
Sbjct: 121 KGNAAAALLLIAFLCSAAISILSSLALSNKPN 152

[Close]

BLAST of MC04g1558 vs. ExPASy TrEMBL
Match: A0A1S3C911 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1)

HSP 1 Score: 191 bits (484), Expect = 1.46e-59
Identity = 109/150 (72.67%), Postives = 130/150 (86.67%), Query Frame = 0


Query: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQ--GN--IHFHNVNSYRFAMATIIIGGAFNL 66
           M +KIAS VLRV+TFVFL +SIIVL TNS+  GN  +HFHNVNSYR+AMATIIIGGAFNL
Sbjct: 5   MATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGGAFNL 64

Query: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126
           LQIAL+LY +++K+ G++LF FYGDKVLSY LL+GAAA LG  +DL AN++ + SFF +G
Sbjct: 65  LQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSFFDQG 124

Query: 127 NAAAALLLIAFLCSAAISILSSLALSNKPN 152
           NAAAALLL+AFLCSA IS+LSSLALSNKPN
Sbjct: 125 NAAAALLLLAFLCSAIISVLSSLALSNKPN 154

[Close]

BLAST of MC04g1558 vs. ExPASy TrEMBL
Match: A0A6J1FMS6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1)

HSP 1 Score: 182 bits (461), Expect = 4.60e-56
Identity = 107/149 (71.81%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQG----NIHFHNVNSYRFAMATIIIGGAFNL 66
           MG+KIAS VLRV+TFVFL ISIIVL T S+      + FHNVNSYRFAMATIIIGGAFNL
Sbjct: 5   MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNL 64

Query: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126
           LQIAL+LY +I+KS G +LF F+GDKVLSY LL+GAAA LG  IDL ANI+ + SFF +G
Sbjct: 65  LQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSFFDQG 124

Query: 127 NAAAALLLIAFLCSAAISILSSLALSNKP 151
           NAAAALLL+AFLCSA +S+LSS ALS+KP
Sbjct: 125 NAAAALLLLAFLCSAIVSVLSSFALSHKP 153

[Close]

BLAST of MC04g1558 vs. ExPASy TrEMBL
Match: A0A6J1JYE7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1)

HSP 1 Score: 181 bits (459), Expect = 9.28e-56
Identity = 106/149 (71.14%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQG----NIHFHNVNSYRFAMATIIIGGAFNL 66
           MG+KIAS VLRV+TFVFL ISIIVL T S+      + FHNVNSYRFAMATIIIGGAFNL
Sbjct: 5   MGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGGAFNL 64

Query: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126
           LQIAL+LY +I+K+ G +LF F+GDKVLSY LL+GAAA LG  IDL ANI+ + SFF +G
Sbjct: 65  LQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSFFDQG 124

Query: 127 NAAAALLLIAFLCSAAISILSSLALSNKP 151
           NAAAALLL+AFLCSA +S+LSS ALS+KP
Sbjct: 125 NAAAALLLLAFLCSAVVSVLSSFALSHKP 153

[Close]

BLAST of MC04g1558 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 141 bits (356), Expect = 5.34e-40
Identity = 82/158 (51.90%), Postives = 116/158 (73.42%), Query Frame = 0


Query: 8   GSKIASLVLRVVTFVFLFISIIVLATNS---------QGNIHFHNVNSYRFAMATIIIGG 67
           GS+IASL+LR++TFV +FIS++++ATNS         +  + F +V SYR+  A  +IG 
Sbjct: 6   GSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAAAVIGA 65

Query: 68  AFNLLQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGM--- 127
           A +LLQIAL+LY++++KS G   F  + DK+L+Y+LLSGA+AGLG GIDL +N + +   
Sbjct: 66  ALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYKDLVGN 125

Query: 128 --GSFFGKGNAAAALLLIAFLCSAAISILSSLALSNKP 151
              SFF KG+A+AA+LL+AF+CSA +SILSSLAL  KP
Sbjct: 126 IFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRKP 163

[Close]

BLAST of MC04g1558 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 80.9 bits (198), Expect = 9.9e-16
Identity = 59/160 (36.88%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 10  KIASLVLRVVTFVFLFISIIVLATN-----SQGN---IHFHNVNSYRFAMATIIIGGAFN 69
           K+  L+LRV+T VFL I++I+L+TN     SQG+    HF +V +YR+ ++  +IG  + 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYA 73

Query: 70  LLQI--ALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLN---------A 129
           ++Q+   +S +    K+  N    FYGDK++SY++ +G+AAG G   DL           
Sbjct: 74  VIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVALD 133

Query: 130 NIEGMGSFFGKGNAAAALLLIAFLCSAAISILSSLALSNK 151
           + + +  FF KG A+A+LLL AF+C A +S+ SS A++ +
Sbjct: 134 STDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of MC04g1558 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-15
Identity = 57/157 (36.31%), Postives = 95/157 (60.51%), Query Frame = 0


Query: 14  LVLRVVTFVFLFISIIVLATN--------SQGNIHFHNVNSYRFAMATIIIGGAFNLLQI 73
           L+LRV+T  FL I++++++TN        +   + F++V +YR+ ++  +IG  + ++Q+
Sbjct: 18  LLLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQL 77

Query: 74  ALSL-YYIISKSHG-NLLFYFYGDKVLSYVLLSGAAAGLGGGIDLN---------ANIEG 133
            L++  +   K+H     F FYGDKV+SY+L +G+AAG G   DL           + + 
Sbjct: 78  FLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDP 137

Query: 134 MGSFFGKGNAAAALLLIAFLCSAAISILSSLALSNKP 152
           +  FF KG A+A+LLL AF+  A +S+ SSLALS +P
Sbjct: 138 VDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

The following BLAST results are available for this feature:

BLAST of MC04g1558 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	3.0e-25	43.04	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
C6T1Z6	1.8e-22	44.81	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9NBE5	2.6e-21	40.37	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
A1XGB4	2.2e-15	42.48	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
D7LD59	4.8e-15	37.20	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of MC04g1558 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134262.1	2.03e-91	100.00	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_038877615.1	7.81e-62	76.00	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_008458887.1	3.02e-59	72.67	PREDICTED: CASP-like protein 4D1 [Cucumis melo]	[more]
XP_031741109.1	4.28e-59	74.67	CASP-like protein 4D1 isoform X1 [Cucumis sativus] >KAE8648540.1 hypothetical pr...	[more]
XP_023551429.1	9.51e-56	71.14	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC04g1558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ60	9.85e-92	100.00	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1	[more]
A0A1S3C911	1.46e-59	72.67	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1	[more]
A0A6J1FMS6	4.60e-56	71.81	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1	[more]
A0A6J1JYE7	9.28e-56	71.14	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1	[more]
A0A6J1C1A4	5.34e-40	51.90	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]

BLAST of MC04g1558 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	9.9e-16	36.88	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	2.9e-15	36.31	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 8..135 e-value: 7.8E-20 score: 71.2
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 8..150
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 8..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1558.1	MC04g1558.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding