MC04g1544 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1544
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Actin-depolymerizing factor
Location	MC04: 23267331 .. 23270971 (+)
RNA-Seq Expression	MC04g1544
Synteny	MC04g1544

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGAAGAAATAATTTCATAGCCCATAACCTAATTTCTAAAGCCATTTTTTTCATATATGAGACGTGTGTCGACTATATCTTAAATATCTACCTGGTTTATACAAAATGTCGGATAGGGAATTTGTCTCAAATGTAGCTTAAGTGATACCCTTTCTTAATTAATAATTTTTATTACGAGCAAGTTTAATAGTAATTGACATATACACCTTTACTAGTTCGAGGTTGGATTTTTCATATCCTAAATTGTTGTACTAGGAAAAAGAATTTCATCCTATCTAAAAAAAATAGACGTATAAATTATAAGGTATTTGGCTATTTGTTTTTCTTTTTTCTAAATGAAAATTGGATGCTTTTCATGCATTGAGGTGGGACCGAAATGATACCCACCGCTAAAATTGGGTGGAGCCAAATTATTGGTAGAATGTTCGGCTTCTTAACCGTCACGGTGATATTAGCAAGCTCCCCCAGGGTGAATCGCTTCCACAAACTTATTATTAATATTAATATTAATAAAACCATTATTATTTATTTATATAATATTTGCTTTTAATATCAGCGTCGAATCACTTTCGCAGCCCTCGTTTTTCATCCATCCTCCTCTACAGCCTCTCTTCTATCATCTCGCTCGAGGGAGCCCTAAATTTTCTCAACGTTTCTCGCCTTTTCTTTCGCTTTCTCGCCTATAATTTTCTCGGGAAAATGGTGAGCATTTCTTCCTATTATCTGCGCTTGCTCACCTCTATATTTGGCATATTTTCTTGCATTTTTTAAAAAATATTTATAGGTTTTGTTTCTTTAGTTTTATTTTAGTTGTTCCTCCTCGCGTTTTTGTATTCGATCCGTGTGATTTTTGGCTATTTTGAAATGGAATCCTTGTAAATCGCTCTACCGATTGGTGGTTAATAATTTTTCATCTCGCTGCTCATTGTGGTCCGCTTGTTTTTTACTTCATTGGCCCTAGATTGTTGATCTTGTTGGCATCCTAGTGCTTGATCTCTGTTACCTTTTTTTTTTTTTTTTTTTTTAAATATGTGAGTGCCATACACATGTAAGCGAGTGGGTAAAGCATTATCCATCATTGATGAAGTAAAAAACTTATTACACTCTCACTCATTTATTGCTGTTCTCACTGGGGCCTTGTAACTGTACTCTGTTTTCCAATGATAGGTTTTTTTAAGGTTATATTAGTACATTGGTTGGTTTTTGTGGAAGGAAGATTTATGTATAGGTCGCGTTCTTTTATCTATCTTTGCATTATTTTTGTAATTTGTCCACGGCTTTACCTTTTGCACATTTAATGTAGTTTGATTCTGTCTGCTCCATCTCAGTGGTTTATGCACATGCATTTGTGTTCGTTGAAAGAGTATGATGATTCATCACAAATTCATAAGGGTCATGAAGAATAGAGAATTGATTTAAAATCTTGGCCTCCGGAGCTTCACACCTTCCATCTGAAAACCCTCAAAAAACCACTTTAGACCTTATATGTCTAGAACTTTACACCACCTTTTAAGAGAAAAACCTTTTGAGGTATGCCTTTCAATAAAGACTTATTCTATTATGAAAAATTTGTTTCCGGCAAAGATTTGTTACATACAGATACAGCTCCATCTTGTTTGAAAAAATAAATATTAGACTTCTGACAATTACACCAACACAAGGAAGGAAGTCCTTACTCCTTGGTTATAACTTTGTCAAATCAAATGTAAGTCTCTCTTCATGTCTTTCTTTAGCCAGCTTTCTATTTGGAGTTGGGTATGATGAGAAGATCTCTGCTATAGTGAGACCATCGTCTCGTTCCTCAAATTCCTAGACTGTATAGCCCTGTTAGTATAGCCTCCAGAATTCATGAAGTTTGGGATGATGGAAATCGTTGGAATCTTAATTTTAGGTTGGTGTGTGCTTTGAATGCCATTTTCGATTTGTTTCACAAAAACTATTGATACTCCGTGAGCTGTGTCCAAAATGCTCTTGTCCAGCTGGGGTTAGCCCATTTGATTTTTATCTATTTTTGTGCCAGTGTGAATTTTGTTACATGAAAGAAACTATTGGATGTTTCAAGGAGAATCTTGAAATGAAATTGAGGGTTGAGATTCTTGCTTTTTTTCCTTTCTTGCCTTTTTGGAGATCTTATTTGGCTAAAAAATGTATAATTACTCTCCCTCTCCCTATAGCTAGATGGCGAGGGCTTTTTCTTCCCACACTCTCCTCCCCCAGGAAGAAGAGTAAAGAAAAAGAAGGAATCAGTAATGGTTATTATTACAAGCGTTTGGTGGAGTAATTATTTGATCTTCTTGTAGTTTAAAGAAATGAAGCTTCACAGCCCCCAACTCAATTTTCACGCTCCAACCAAGTATCTGTTCATCAAATTTGAGCTGAATGCTCGAACTATCTAGCAAAGAGATCGACTTGTTATAGAAATGGGAAATTGGTTCCACTTTCCTCCATCCTTGTCTAACCTGCCCTGGACTTCTACTATGGTTTGAATTCATGGATACTATGGAGATTAAGTTCTCTGAGTTGTAATATATATTTGTAAATCAATTTATCACAGGCAAATGCAGCATCAGGGATGGCTGTGCACGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTCTATAGTTTTCAAGATTGAGGAAAAACAGAAGCAGGTTTTGGTGGAAAAGCTTGGCGAACCATCTCAAAGTTATGATGATTTTGCTGCCAGCCTCCCTGCTGATGAATGCCGATATGCAGTCTACGACTTCGATTTTGTGACTGAAGAGAATTGCCAAAAGAGCAGGATCATATTCATTGCATGGTAAATGTACCATATAAATAACCTTTTCACTCTACCATCTCCATGTTTGTTCGAATCAGTTCTCTCTCATTTTATGAATCTATACGCATTGCGTTTGGACTCATCGTTTATGACTGTGATCTATGAAGGTCTCCCGATACAGCAAAGGTGAGAAGCAAGATGATCTATGCAAGCTCAAAGGATAGGTTCAAGAGGGAGTTGGATGGGATTCAAGTGGAGTTACAAGCAACTGATCCTACCGAGATGGGGCTCGATGTTATCAGAAGTCGGTCCGCCTGAGTCATGTTAGCTGCTGGCCTTGATTACGTGAAATGTTCATAGATTGTGGGCTCCAAACTTGCTTTTTTATGCTTATTATATTCGCATGTCCTTAAAGTTCTTTTCTTCTACCTAAGAGTTGTTCTAAGGATGACTGTTCTTTGGCTTTCGTGAATTTTTAACATGGTTGGATATTTATGTATGGCTGTGGGGTTATACTGCCGAAATACATATGCAGGTAAATATGGATTAATGCCAGTTCGAGTATATGAGTTTGGTTTTATCATTATGAGGAGAATCGGTTGGAATAATTTGCCATGATTTTCGAGTTTCTCATGTTCCATTTTATCATTCTATTCAAATTTCATGTCCCACTACTAATTTGCCTTGTGAATTAAGATCTGACGAGCAGTTTCTGTAAAATGGAGTTTATAAATTTAATTCTTTGGGTGTGGGGATGACACTTTTCTGGTGGTTTACGACTCTGATTTTGAATTACTACCTGGAGTTTCATGGTTTTGCAGACAATTGGATGGTTCGAACAGAGAAATTTCACTATGT

mRNA sequence

CTCAGAAGAAATAATTTCATAGCCCATAACCTAATTTCTAAAGCCATTTTTTTCATATATGAGACGTGTGTCGACTATATCTTAAATATCTACCTGGTTTATACAAAATGTCGGATAGGGAATTTGTCTCAAATGTAGCTTAAGTGATACCCTTTCTTAATTAATAATTTTTATTACGAGCAAGTTTAATAGTAATTGACATATACACCTTTACTAGTTCGAGGTTGGATTTTTCATATCCTAAATTGTTGTACTAGGAAAAAGAATTTCATCCTATCTAAAAAAAATAGACGTATAAATTATAAGGTATTTGGCTATTTGTTTTTCTTTTTTCTAAATGAAAATTGGATGCTTTTCATGCATTGAGGTGGGACCGAAATGATACCCACCGCTAAAATTGGGTGGAGCCAAATTATTGGTAGAATGTTCGGCTTCTTAACCGTCACGGTGATATTAGCAAGCTCCCCCAGGGTGAATCGCTTCCACAAACTTATTATTAATATTAATATTAATAAAACCATTATTATTTATTTATATAATATTTGCTTTTAATATCAGCGTCGAATCACTTTCGCAGCCCTCGTTTTTCATCCATCCTCCTCTACAGCCTCTCTTCTATCATCTCGCTCGAGGGAGCCCTAAATTTTCTCAACGTTTCTCGCCTTTTCTTTCGCTTTCTCGCCTATAATTTTCTCGGGAAAATGGCAAATGCAGCATCAGGGATGGCTGTGCACGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTCTATAGTTTTCAAGATTGAGGAAAAACAGAAGCAGGTTTTGGTGGAAAAGCTTGGCGAACCATCTCAAAGTTATGATGATTTTGCTGCCAGCCTCCCTGCTGATGAATGCCGATATGCAGTCTACGACTTCGATTTTGTGACTGAAGAGAATTGCCAAAAGAGCAGGATCATATTCATTGCATGGTCTCCCGATACAGCAAAGGTGAGAAGCAAGATGATCTATGCAAGCTCAAAGGATAGGTTCAAGAGGGAGTTGGATGGGATTCAAGTGGAGTTACAAGCAACTGATCCTACCGAGATGGGGCTCGATGTTATCAGAAGTCGGTCCGCCTGAGTCATGTTAGCTGCTGGCCTTGATTACGTGAAATGTTCATAGATTGTGGGCTCCAAACTTGCTTTTTTATGCTTATTATATTCGCATGTCCTTAAAGTTCTTTTCTTCTACCTAAGAGTTGTTCTAAGGATGACTGTTCTTTGGCTTTCGTGAATTTTTAACATGGTTGGATATTTATGTATGGCTGTGGGGTTATACTGCCGAAATACATATGCAGGTAAATATGGATTAATGCCAGTTCGAGTATATGAGTTTGGTTTTATCATTATGAGGAGAATCGGTTGGAATAATTTGCCATGATTTTCGAGTTTCTCATGTTCCATTTTATCATTCTATTCAAATTTCATGTCCCACTACTAATTTGCCTTGTGAATTAAGATCTGACGAGCAGTTTCTGTAAAATGGAGTTTATAAATTTAATTCTTTGGGTGTGGGGATGACACTTTTCTGGTGGTTTACGACTCTGATTTTGAATTACTACCTGGAGTTTCATGGTTTTGCAGACAATTGGATGGTTCGAACAGAGAAATTTCACTATGT

Coding sequence (CDS)

ATGGCAAATGCAGCATCAGGGATGGCTGTGCACGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTCTATAGTTTTCAAGATTGAGGAAAAACAGAAGCAGGTTTTGGTGGAAAAGCTTGGCGAACCATCTCAAAGTTATGATGATTTTGCTGCCAGCCTCCCTGCTGATGAATGCCGATATGCAGTCTACGACTTCGATTTTGTGACTGAAGAGAATTGCCAAAAGAGCAGGATCATATTCATTGCATGGTCTCCCGATACAGCAAAGGTGAGAAGCAAGATGATCTATGCAAGCTCAAAGGATAGGTTCAAGAGGGAGTTGGATGGGATTCAAGTGGAGTTACAAGCAACTGATCCTACCGAGATGGGGCTCGATGTTATCAGAAGTCGGTCCGCCTGA

Protein sequence

MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRSA

Homology

[Close]

BLAST of MC04g1544 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.3e-64
Identity = 120/138 (86.96%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+R IV+KIEEKQKQV+VEK+GEP++SY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           P +ECRYAVYDFDFVT ENCQKSRI FIAW PDTA+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQA DPTEMGLDVI+SR+
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]

BLAST of MC04g1544 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.3e-64
Identity = 119/138 (86.23%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKL+FL+LKAKRTYR I++KIEEKQK+V+VEKLGEP++SY+DF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDF+T+EN QKSRI FIAWSPDTA+VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQATDPTEMGLDV RSR+
Sbjct: 121 LQATDPTEMGLDVFRSRA 138

[Close]

BLAST of MC04g1544 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 2.5e-63
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+R IV+KIEEKQKQV+VEK+GEP  +Y+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of MC04g1544 vs. ExPASy Swiss-Prot
Match: Q39251 (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana OX=3702 GN=ADF2 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.3e-63
Identity = 117/138 (84.78%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKL+F++LKAKRT+R+IV+KIE+  KQV+VEKLGEP QSYDDFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PAD+CRY +YDFDFVT ENCQKS+I FIAWSPDTAKVR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQATDPTEMGLDV +SR+
Sbjct: 121 LQATDPTEMGLDVFKSRT 136

[Close]

BLAST of MC04g1544 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 9.6e-63
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+R IV+KIEEKQKQV+VEK+G+P Q+Y++FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQATDPTEM LDV RSR+
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of MC04g1544 vs. NCBI nr
Match: XP_022133968.1 (actin-depolymerizing factor 1-like [Momordica charantia])

HSP 1 Score: 275 bits (703), Expect = 4.63e-93
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSA 139
           LQATDPTEMGLDVIRSRSA
Sbjct: 121 LQATDPTEMGLDVIRSRSA 139

[Close]

BLAST of MC04g1544 vs. NCBI nr
Match: XP_022922159.1 (actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolymerizing factor 2 [Cucurbita maxima] >KAG6602360.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033039.1 Actin-depolymerizing factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266 bits (680), Expect = 1.54e-89
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYR IVFKIEEKQKQV+VEKLGEPSQSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDT++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 138
           LQATDPTEMGLDVIRSRS
Sbjct: 121 LQATDPTEMGLDVIRSRS 138

[Close]

BLAST of MC04g1544 vs. NCBI nr
Match: XP_008463478.1 (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479.1 PREDICTED: actin-depolymerizing factor 2 isoform X2 [Cucumis melo])

HSP 1 Score: 265 bits (676), Expect = 6.08e-89
Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYR IVFKIEEKQKQV+VEKLGEPS+SY+DF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDT+KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 138
           LQATDPTEMGLDVIRSRS
Sbjct: 121 LQATDPTEMGLDVIRSRS 138

[Close]

BLAST of MC04g1544 vs. NCBI nr
Match: XP_023534804.1 (actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265 bits (676), Expect = 6.29e-89
Identity = 132/138 (95.65%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYR IVFKIEEKQKQV+VEKLG+PSQSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDT++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 138
           LQATDPTEMGLDVIRSRS
Sbjct: 121 LQATDPTEMGLDVIRSRS 138

[Close]

BLAST of MC04g1544 vs. NCBI nr
Match: XP_038891099.1 (actin-depolymerizing factor 2 [Benincasa hispida])

HSP 1 Score: 264 bits (675), Expect = 8.64e-89
Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYR IVFKIEEKQKQV+VEKLGEPSQSY+DF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDT+KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 138
           LQATDP+EMGLDVIRSRS
Sbjct: 121 LQATDPSEMGLDVIRSRS 138

[Close]

BLAST of MC04g1544 vs. ExPASy TrEMBL
Match: A0A6J1C0P0 (actin-depolymerizing factor 1-like OS=Momordica charantia OX=3673 GN=LOC111006374 PE=3 SV=1)

HSP 1 Score: 275 bits (703), Expect = 2.24e-93
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRSA 139
           LQATDPTEMGLDVIRSRSA
Sbjct: 121 LQATDPTEMGLDVIRSRSA 139

[Close]

BLAST of MC04g1544 vs. ExPASy TrEMBL
Match: A0A6J1JTE7 (actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 SV=1)

HSP 1 Score: 266 bits (680), Expect = 7.47e-90
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYR IVFKIEEKQKQV+VEKLGEPSQSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDT++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 138
           LQATDPTEMGLDVIRSRS
Sbjct: 121 LQATDPTEMGLDVIRSRS 138

[Close]

BLAST of MC04g1544 vs. ExPASy TrEMBL
Match: A0A6J1E2L4 (actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3 SV=1)

HSP 1 Score: 266 bits (680), Expect = 7.47e-90
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYR IVFKIEEKQKQV+VEKLGEPSQSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDT++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 138
           LQATDPTEMGLDVIRSRS
Sbjct: 121 LQATDPTEMGLDVIRSRS 138

[Close]

BLAST of MC04g1544 vs. ExPASy TrEMBL
Match: A0A1S3CJB1 (actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640 PE=3 SV=1)

HSP 1 Score: 265 bits (676), Expect = 2.94e-89
Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYR IVFKIEEKQKQV+VEKLGEPS+SY+DF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDT+KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 138
           LQATDPTEMGLDVIRSRS
Sbjct: 121 LQATDPTEMGLDVIRSRS 138

[Close]

BLAST of MC04g1544 vs. ExPASy TrEMBL
Match: A0A0A0KNQ1 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G512870 PE=3 SV=1)

HSP 1 Score: 263 bits (672), Expect = 1.20e-88
Identity = 131/138 (94.93%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFLDLKAKRTYR IVFKIEEKQKQV+VEKLG+PS+SY+DF ASL
Sbjct: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDT+KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 138
           LQATDPTEMGLDVIRSRS
Sbjct: 121 LQATDPTEMGLDVIRSRS 138

[Close]

BLAST of MC04g1544 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 242.7 bits (618), Expect = 1.8e-64
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+R IV+KIEEKQKQV+VEK+GEP  +Y+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSR 138
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of MC04g1544 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 241.9 bits (616), Expect = 3.1e-64
Identity = 117/138 (84.78%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKL+F++LKAKRT+R+IV+KIE+  KQV+VEKLGEP QSYDDFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PAD+CRY +YDFDFVT ENCQKS+I FIAWSPDTAKVR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQATDPTEMGLDV +SR+
Sbjct: 121 LQATDPTEMGLDVFKSRT 136

[Close]

BLAST of MC04g1544 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 240.7 bits (613), Expect = 6.8e-64
Identity = 117/138 (84.78%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASL 60
           MANAASGMAVHDDCKLRFL+LKAKRT+R IV+KIEEKQKQV+VEK+G+P Q+Y++FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVE 120
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD AKVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPTEMGLDVIRSRS 139
           LQATDPTEM LDV RSR+
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of MC04g1544 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 238.8 bits (608), Expect = 2.6e-63
Identity = 116/137 (84.67%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASLP 61
           ANAASGMAVHDDCKLRFL+LKAKRT+R IV+KIEEKQKQV+VEK+G+P Q+Y++FAA LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVEL 121
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD AKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPTEMGLDVIRSRS 139
           QATDPTEM LDV RSR+
Sbjct: 133 QATDPTEMDLDVFRSRA 149

[Close]

BLAST of MC04g1544 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 229.9 bits (585), Expect = 1.2e-60
Identity = 111/130 (85.38%), Postives = 122/130 (93.85%), Query Frame = 0


Query: 8   MAVHDDCKLRFLDLKAKRTYRSIVFKIEEKQKQVLVEKLGEPSQSYDDFAASLPADECRY 67
           MAVHDDCKLRFL+LKAKRT+R IV+KIEEKQKQV+VEK+GEP  +Y+DFAASLPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 68  AVYDFDFVTEENCQKSRIIFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127
           A+YDFDFVT ENCQKS+I FIAW PD AKVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 128 EMGLDVIRSR 138
           EM LDV++SR
Sbjct: 121 EMDLDVLKSR 130

The following BLAST results are available for this feature:

BLAST of MC04g1544 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI2	2.3e-64	86.96	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]
Q9FVI1	2.3e-64	86.23	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q9ZSK3	2.5e-63	86.13	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]
Q39251	4.3e-63	84.78	Actin-depolymerizing factor 2 OS=Arabidopsis thaliana OX=3702 GN=ADF2 PE=1 SV=1	[more]
Q39250	9.6e-63	84.78	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]

BLAST of MC04g1544 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133968.1	4.63e-93	100.00	actin-depolymerizing factor 1-like [Momordica charantia]	[more]
XP_022922159.1	1.54e-89	96.38	actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolym...	[more]
XP_008463478.1	6.08e-89	95.65	PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479...	[more]
XP_023534804.1	6.29e-89	95.65	actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo]	[more]
XP_038891099.1	8.64e-89	95.65	actin-depolymerizing factor 2 [Benincasa hispida]	[more]

BLAST of MC04g1544 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0P0	2.24e-93	100.00	actin-depolymerizing factor 1-like OS=Momordica charantia OX=3673 GN=LOC11100637...	[more]
A0A6J1JTE7	7.47e-90	96.38	actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 S...	[more]
A0A6J1E2L4	7.47e-90	96.38	actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3...	[more]
A0A1S3CJB1	2.94e-89	95.65	actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640...	[more]
A0A0A0KNQ1	1.20e-88	94.93	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G512870 PE=3 ...	[more]

BLAST of MC04g1544 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59890.1	1.8e-64	86.13	actin depolymerizing factor 4	[more]
AT3G46000.1	3.1e-64	84.78	actin depolymerizing factor 2	[more]
AT3G46010.1	6.8e-64	84.78	actin depolymerizing factor 1	[more]
AT3G46010.2	2.6e-63	84.67	actin depolymerizing factor 1	[more]
AT5G59890.2	1.2e-60	85.38	actin depolymerizing factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..139 e-value: 6.6E-57 score: 205.0
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..136 e-value: 1.4E-36 score: 125.1
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 5..139 score: 38.138016
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..139 e-value: 7.5E-52 score: 176.5
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..138
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..137 e-value: 1.69838E-64 score: 190.846
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..138
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1544.1	MC04g1544.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding