MC04g1496 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g1496
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 22809158 .. 22809310 (+)
RNA-Seq ExpressionMC04g1496
SyntenyMC04g1496
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCCATCTCCACCATCTTATCCCTTCTCTTCTCTTCTCTCTCCTTTTTATCTGATCCTTGGCCTGAGGCATACTATGGTCTCGCTGTCGAAAACTCGGCACAGCTTTCGCTCCTCGGGTACGCTATTTTTCCTGCAGATACTTCAATC

mRNA sequence

ATGGCACCCATCTCCACCATCTTATCCCTTCTCTTCTCTTCTCTCTCCTTTTTATCTGATCCTTGGCCTGAGGCATACTATGGTCTCGCTGTCGAAAACTCGGCACAGCTTTCGCTCCTCGGGTACGCTATTTTTCCTGCAGATACTTCAATC

Coding sequence (CDS)

ATGGCACCCATCTCCACCATCTTATCCCTTCTCTTCTCTTCTCTCTCCTTTTTATCTGATCCTTGGCCTGAGGCATACTATGGTCTCGCTGTCGAAAACTCGGCACAGCTTTCGCTCCTCGGGTACGCTATTTTTCCTGCAGATACTTCAATC

Protein sequence

MAPISTILSLLFSSLSFLSDPWPEAYYGLAVENSAQLSLLGYAIFPADTSI
Homology
[Close]
BLAST of MC04g1496 vs. NCBI nr
Match: KGN47818.1 (hypothetical protein Csa_004141 [Cucumis sativus])

HSP 1 Score: 85.5 bits (210), Expect = 2.71e-20
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0 

Query: 1  MAPISTILSLLFSSLSFLSDPWPEAYYGLAVENSAQLSLLGYAIFPADTSI 51
          MAPISTILS L SSLSFLSDPWPEA+YGL +E+SAQLSL+GYAIF  DT+I
Sbjct: 25 MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGYAIFHTDTAI 75

[Close]
BLAST of MC04g1496 vs. NCBI nr
Match: KAA0036462.1 (hypothetical protein E6C27_scaffold147G00310 [Cucumis melo var. makuwa] >TYK00026.1 hypothetical protein E5676_scaffold360G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.94e-15
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 1  MAPISTILSLLFSSLSFLSDPWPEAYYGLAVENSAQLSLLGYAI 44
          MAPISTILS L SSLSFLSDPWPEA+YGL +E+SAQLSL+G+ +
Sbjct: 1  MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGFLL 44

[Close]
BLAST of MC04g1496 vs. ExPASy TrEMBL
Match: A0A0A0KE34 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405315 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.31e-20
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0 

Query: 1  MAPISTILSLLFSSLSFLSDPWPEAYYGLAVENSAQLSLLGYAIFPADTSI 51
          MAPISTILS L SSLSFLSDPWPEA+YGL +E+SAQLSL+GYAIF  DT+I
Sbjct: 25 MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGYAIFHTDTAI 75

[Close]
BLAST of MC04g1496 vs. ExPASy TrEMBL
Match: A0A5D3BP26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00710 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.37e-16
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 1  MAPISTILSLLFSSLSFLSDPWPEAYYGLAVENSAQLSLLGYAI 44
          MAPISTILS L SSLSFLSDPWPEA+YGL +E+SAQLSL+G+ +
Sbjct: 1  MAPISTILSFLLSSLSFLSDPWPEAFYGLPLEHSAQLSLIGFLL 44

The following BLAST results are available for this feature:
BLAST of MC04g1496 vs.
Match NameE-valueIdentityDescription
BLAST of MC04g1496 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47818.12.71e-2080.39hypothetical protein Csa_004141 [Cucumis sativus][more]
KAA0036462.11.94e-1577.27hypothetical protein E6C27_scaffold147G00310 [Cucumis melo var. makuwa] >TYK0002... [more]
BLAST of MC04g1496 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE341.31e-2080.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G405315 PE=4 SV=1[more]
A0A5D3BP269.37e-1677.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MC04g1496 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g1496.1MC04g1496.1mRNA