MC04g1479 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1479
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Small polypeptide DEVIL 8
Location	MC04: 22649057 .. 22649215 (-)
RNA-Seq Expression	MC04g1479
Synteny	MC04g1479

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAAGAACGAAGAAGGCTGTGCAGCAGCAGGAGGAGAAGAACGGCGTCGTTTAAGCAACGCTGCAGTTTGCTAGTGAAGGAACAGAGGGCTAGATTTTACATCCTCCGCCGATGTGTCGTCATGCTCGTCTGCTGGCATTACTACGCCGACCCT

mRNA sequence

ATGATGGAAGAACGAAGAAGGCTGTGCAGCAGCAGGAGGAGAAGAACGGCGTCGTTTAAGCAACGCTGCAGTTTGCTAGTGAAGGAACAGAGGGCTAGATTTTACATCCTCCGCCGATGTGTCGTCATGCTCGTCTGCTGGCATTACTACGCCGACCCT

Coding sequence (CDS)

ATGATGGAAGAACGAAGAAGGCTGTGCAGCAGCAGGAGGAGAAGAACGGCGTCGTTTAAGCAACGCTGCAGTTTGCTAGTGAAGGAACAGAGGGCTAGATTTTACATCCTCCGCCGATGTGTCGTCATGCTCGTCTGCTGGCATTACTACGCCGACCCT

Protein sequence

MMEERRRLCSSRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP

Homology

[Close]

BLAST of MC04g1479 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.1e-06
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 18 SFKQRCSLLVKEQRARFYILRRCVVMLVCWH 49
          +F Q+CS +VK+QRA+FYILRRC+ MLVCWH
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWH 44

[Close]

BLAST of MC04g1479 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.4e-06
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 3   EERRRLCSSRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYAD 53
           +ERR   SS    ++S  Q+ S L KEQ+ARFYI+RRCV MLVCWH + D
Sbjct: 69  KERRSSSSS----SSSITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGD 114

[Close]

BLAST of MC04g1479 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.1e-06
Identity = 21/38 (55.26%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 10 SSRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCW 48
          + +++   +F ++C+ LVKEQRARFYI+RRCV+ML+CW
Sbjct: 43 NGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICW 80

[Close]

BLAST of MC04g1479 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 7.0e-06
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 10 SSRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCW 48
          S +++    F ++C  LVKEQRARFYI+RRCVVML+CW
Sbjct: 31 SRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICW 68

[Close]

BLAST of MC04g1479 vs. ExPASy Swiss-Prot
Match: Q6IM92 (Small polypeptide DEVIL 9 OS=Arabidopsis thaliana OX=3702 GN=DVL9 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.6e-05
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0


Query: 10  SSRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCWH 49
           SS ++   S  Q+ S L KEQ+ RFYI+RRCV MLVCWH
Sbjct: 65  SSSKKEKGSITQKYSSLAKEQKGRFYIMRRCVAMLVCWH 103

[Close]

BLAST of MC04g1479 vs. NCBI nr
Match: KAG7016303.1 (hypothetical protein SDJN02_21410, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 89.7 bits (221), Expect = 4.27e-22
Identity = 49/63 (77.78%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 1  MMEERRRLCS----------SRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYY 53
          MMEERRRLC           SRR  TASFKQRCSLLVKEQRARFYILRRCVVMLVCW+YY
Sbjct: 1  MMEERRRLCRGEVRDSSSACSRRSATASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYY 60

[Close]

BLAST of MC04g1479 vs. NCBI nr
Match: KAE8647306.1 (hypothetical protein Csa_004317 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 1.14e-21
Identity = 48/60 (80.00%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 1  MMEERRRLCS-------SRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 53
          M EERRRLC        SRR  TASFKQRCSLLVKEQRARFYILRRCVVMLVCW+YYADP
Sbjct: 1  MTEERRRLCKRTPSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60

[Close]

BLAST of MC04g1479 vs. NCBI nr
Match: KAA0036490.1 (DVL-like protein [Cucumis melo var. makuwa] >TYJ99996.1 DVL-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 1.33e-20
Identity = 47/60 (78.33%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 1  MMEERRRLCS-------SRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 53
          M EE RRLC        SRR  TASFKQRCSLLVKEQRARFYILRRCVVMLVCW+YYADP
Sbjct: 1  MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60

[Close]

BLAST of MC04g1479 vs. NCBI nr
Match: KAG5237761.1 (DEVIL protein [Salix suchowensis])

HSP 1 Score: 65.5 bits (158), Expect = 1.41e-12
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0


Query: 18 SFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 53
          SF +RCS LVKEQRARFYILRRCVVMLVCWH Y +P
Sbjct: 19 SFGRRCSGLVKEQRARFYILRRCVVMLVCWHEYGEP 54

[Close]

BLAST of MC04g1479 vs. NCBI nr
Match: RQO97113.1 (hypothetical protein POPTR_010G226250 [Populus trichocarpa])

HSP 1 Score: 64.7 bits (156), Expect = 2.92e-12
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 18 SFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 53
          SF +RCS LVKEQRARFYILRRCV MLVCWH Y +P
Sbjct: 20 SFGRRCSSLVKEQRARFYILRRCVTMLVCWHEYGEP 55

[Close]

BLAST of MC04g1479 vs. ExPASy TrEMBL
Match: A0A5A7SZH0 (DVL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00410 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.44e-21
Identity = 47/60 (78.33%), Postives = 48/60 (80.00%), Query Frame = 0


Query: 1  MMEERRRLCS-------SRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 53
          M EE RRLC        SRR  TASFKQRCSLLVKEQRARFYILRRCVVMLVCW+YYADP
Sbjct: 1  MTEEGRRLCKRTSSSACSRRSGTASFKQRCSLLVKEQRARFYILRRCVVMLVCWNYYADP 60

[Close]

BLAST of MC04g1479 vs. ExPASy TrEMBL
Match: A0A3N7FP95 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G226250 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.41e-12
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 18 SFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 53
          SF +RCS LVKEQRARFYILRRCV MLVCWH Y +P
Sbjct: 20 SFGRRCSSLVKEQRARFYILRRCVTMLVCWHEYGEP 55

[Close]

BLAST of MC04g1479 vs. ExPASy TrEMBL
Match: B9HLH7 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G035900 PE=4 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.96e-12
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 18 SFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 53
          SF +RCS LVKEQRARFYILRRCV MLVCWH Y +P
Sbjct: 19 SFGRRCSSLVKEQRARFYILRRCVTMLVCWHDYGEP 54

[Close]

BLAST of MC04g1479 vs. ExPASy TrEMBL
Match: A0A2P5B186 (DEVIL-like protein OS=Trema orientale OX=63057 GN=TorDVL8 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.28e-12
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 18 SFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 53
          SF +RCSLLVKEQRARFYILRRC+ ML+CWH   DP
Sbjct: 38 SFGRRCSLLVKEQRARFYILRRCITMLLCWHERGDP 73

[Close]

BLAST of MC04g1479 vs. ExPASy TrEMBL
Match: A0A5N5EYG6 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_031408 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.33e-12
Identity = 28/36 (77.78%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 18 SFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYADP 53
          SF +RCS+LVKEQRARFYILRRCV ML+CWH   DP
Sbjct: 24 SFGRRCSMLVKEQRARFYILRRCVTMLLCWHERGDP 59

[Close]

BLAST of MC04g1479 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein )

HSP 1 Score: 53.1 bits (126), Expect = 7.7e-08
Identity = 22/31 (70.97%), Postives = 28/31 (90.32%), Query Frame = 0


Query: 18 SFKQRCSLLVKEQRARFYILRRCVVMLVCWH 49
          +F Q+CS +VK+QRA+FYILRRC+ MLVCWH
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWH 44

[Close]

BLAST of MC04g1479 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 )

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-07
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 3   EERRRLCSSRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCWHYYAD 53
           +ERR   SS    ++S  Q+ S L KEQ+ARFYI+RRCV MLVCWH + D
Sbjct: 69  KERRSSSSS----SSSITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGD 114

[Close]

BLAST of MC04g1479 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 )

HSP 1 Score: 51.2 bits (121), Expect = 2.9e-07
Identity = 21/38 (55.26%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 10 SSRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCW 48
          + +++   +F ++C+ LVKEQRARFYI+RRCV+ML+CW
Sbjct: 43 NGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICW 80

[Close]

BLAST of MC04g1479 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 50.4 bits (119), Expect = 5.0e-07
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0


Query: 10 SSRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCW 48
          S +++    F ++C  LVKEQRARFYI+RRCVVML+CW
Sbjct: 31 SRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICW 68

[Close]

BLAST of MC04g1479 vs. TAIR 10
Match: AT1G07490.1 (ROTUNDIFOLIA like 3 )

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-06
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 0


Query: 10  SSRRRRTASFKQRCSLLVKEQRARFYILRRCVVMLVCWH 49
           SS ++   S  Q+ S L KEQ+ RFYI+RRCV MLVCWH
Sbjct: 65  SSSKKEKGSITQKYSSLAKEQKGRFYIMRRCVAMLVCWH 103

The following BLAST results are available for this feature:

BLAST of MC04g1479 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XXN8	1.1e-06	70.97	Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1	[more]
Q8L7D0	1.4e-06	56.00	Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1	[more]
Q8S8S3	4.1e-06	55.26	Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1	[more]
Q6IM93	7.0e-06	60.53	Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1	[more]
Q6IM92	1.6e-05	58.97	Small polypeptide DEVIL 9 OS=Arabidopsis thaliana OX=3702 GN=DVL9 PE=1 SV=1	[more]

BLAST of MC04g1479 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016303.1	4.27e-22	77.78	hypothetical protein SDJN02_21410, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8647306.1	1.14e-21	80.00	hypothetical protein Csa_004317 [Cucumis sativus]	[more]
KAA0036490.1	1.33e-20	78.33	DVL-like protein [Cucumis melo var. makuwa] >TYJ99996.1 DVL-like protein [Cucumi...	[more]
KAG5237761.1	1.41e-12	83.33	DEVIL protein [Salix suchowensis]	[more]
RQO97113.1	2.92e-12	80.56	hypothetical protein POPTR_010G226250 [Populus trichocarpa]	[more]

BLAST of MC04g1479 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZH0	6.44e-21	78.33	DVL-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G004...	[more]
A0A3N7FP95	1.41e-12	80.56	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G226250 PE=4 ...	[more]
B9HLH7	1.96e-12	80.56	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G035900 PE=4 ...	[more]
A0A2P5B186	6.28e-12	77.78	DEVIL-like protein OS=Trema orientale OX=63057 GN=TorDVL8 PE=4 SV=1	[more]
A0A5N5EYG6	6.33e-12	77.78	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]

BLAST of MC04g1479 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36985.1	7.7e-08	70.97	DVL family protein	[more]
AT2G29125.1	1.0e-07	56.00	ROTUNDIFOLIA like 2	[more]
AT2G39705.1	2.9e-07	55.26	ROTUNDIFOLIA like 8	[more]
AT3G55515.1	5.0e-07	60.53	ROTUNDIFOLIA like 7	[more]
AT1G07490.1	1.1e-06	58.97	ROTUNDIFOLIA like 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 28..46 e-value: 5.4E-13 score: 48.5
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 10..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1479.1	MC04g1479.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane