MC04g1478 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1478
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ras-related protein
Location	MC04: 22639962 .. 22643777 (-)
RNA-Seq Expression	MC04g1478
Synteny	MC04g1478

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGGGACTTCTGGGCGATCGGGTGGGCTTAATCCAGAGAACAGTGCAGATGATTCCAAGAATTTACGCGTCAAGGTATTTGAGAAGCAACAAAAAGCTGGTTTTTGTTTTTATTCACTGAGTGTTCGGCTGATATTTGCTCATGATGTATTTTTTTTCTTTTCTTTCCTTTTCTTTTTCATTGTTAAAGGAATAAGACCCCCTTAAGTGAGTTCTTTGTTAGACTGATAAGCGGAAATTTTGTTGATTTTCAATTCTTTCCCGTAAGAGGACAAACATACGATGGCTAAGATGCAGCAAAGGTTTCCTTGTTGGGGAATTGATAATCAAGATGTTATCAAATTTAATGATATTCAAAGTTGAAGATATGCTAATATGTCTGGTTGAGCGCTTGCTGAGAAAGCATAAAAGTTTCTATGGTCTCTTATTAGTTATTTTTCATCTTCTCTTTCTGTCTCCATGCAGCTTGTCCTGCTGGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGACCCAACATCTAAGGTCAGGATTGTATTACGGTCCAGAAATTATTATAAATATATGCTTAACACAAGTAAATTTGTGTTATTATCATTTCATTCCCAAAGTAATTACAATATTTTGGTTATAAATGTTCGTTGGAAAACTCAGGTAACTGTTGGAGCATCATTCTTGTCACAAACAATAGCTTTGCAAGATTCCACAACAGTGAAGTTTGAAATATGGGACACCGCTGGGCAAGAGAGGTAGGATCATCTAAATCTCTAGTAGATATCCTCAAACTCCTCGTGTCTTTAACTTCTTGGCGAGCTACATTAATCTCATTGGCAGTCTTTTTCTAGCTTGCTTCATAGTCACTAGAGCTTTTTGTTGCAAGAGTGTTGTCATTGTTGATTTTTCTTGGTTTAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAAGCCAAGATTCCTTCGCTAAAGCACAATATTGGGTTAAGGTATGTTTTAAAGTGATGATTAAAGTAGTTTTTGTCCTATATTTACTTCTTGTGATTGTTGTATCTGTTCAATTCCAAATTGTAACATCATTGGGCCTTTTACTAGTGATGATCTTATTCCATAGGTATTATGCGTGAGCGTAACCAAAGCAAAACCTAGGAGGCAATTCTTCATTAGCTGAGATTGCCACTCAGTACTGGCCAATTTGATACAGAATCTAATTCTTTTTAATCCATGGATATATTATCTTTTTTTTTTCTTTTTATGAAAAGTTGAGCTTTCATTGAGAGAAATGAAAGAATACAAAGGGGTATACCTAAAAAAAAAAACCAGCCCAACAAAAGGAGCCAAATTAAAAGAGGGCTCCAACCAAACAAAATCAAGTCTAAGGAGTAATTACGAAACACTTTGGACACCGAGGCCCAAAGGGACACAACCGACACATTGAACCTAACAAGGTCCCACACCTGCTCCCATGATCTCTCAACCCTTCTAAGATTCATGTGGTTCCTTTCAAGCCACAAAACCCAAAGAACAGCAAAGACACCCGCTTGCCACAAAAAGCGACCCTTGTCCTTGAACGGAGGATAGTGAAGAGCCTCCTCAAGCATGGAGCAACAATCTCCATGGATATATTATCTGATGATCACATTTCCCTATCTATCTGTTCCCTTGTAGCTTATACTGGCAATATGGTTTTGATATTGGCTCATTAGGATGCTCGATAACCTTGTGCCGAGGCCTGAAGATTATCACTCCTTTTTAACTCCTTTTTCCTAGTAGATGAAATTCGTTACATCTTTGCCGCTTGATAAGCAATCCTCTCTTTTTATGGGACTTCGTTGTTAATCAGTCTCCAATAGAAAGGGTATGGAAGTTGGAACTTTTTCCATCTGAGATGTCTCAGGTTTTGTGTTCGGAGAGGAAGAAAGAGAATTTTAAATGAACAAGTTGGACAATATTTTGTCAGTTTGAATAAAAATATTTATGTCTGGTATAAAGTGAATAGTCTAAAAGATTTCTCTTCATTTTGCAAAAGAAAAATATTTCTCTTCTTCTTTTTTTAGTTTGCATGCATGGTATATCCTTTGACTAGTTCAGTTTGAGTTGGTCATCCTTTGACTAGTTCAAAATCTTCACAATCCATATTGGGCACTTACAGGAGCTACAAAAGCATGGCAGCCCTGATATTATTTTGGCATTGGTCGGTAACAAAGCTGATCTTCAAGAGAAAAGGAAAGTGTCTGTTGAGGTAAAGTCGGTATTATTCAATCGAATGCATTCTTCTTCTTCTGTCTTCTTTATTTATCCTCCTTTTATGTTATTTTGTTTTTTGCAAATGGGGAAATAATTCACTGATATACTTATGTGTCACTTTTGAAGGATGGCACTGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAAACTTCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGTATTCCTGATTTTATCCTTTTAGTATGATTTTCATAGCTGCTGTCTATAAACAAGGTAGATTATTGTGTATGCTACTTTTATGATATTCCACTGTTGTTAGAGTGGTATTAAACAATTTCAATTGAATATTCCTAGTGGATGCGAATGGGAAAGATATTGAATACTGCCGAGAATTGGCAGTTAGAAGTTCAGAATCTGCTTAATACATTGTCATAGGCTGTTAACTTTATAATATTCATTATAGTTGGTAGCCTTAGGAAATGAATTCTTTATTGGTGGTGGTTATGTTGAACTCCATCAAGTGTGAAGTTGGAACGTTCTTTCACCCCAGCTCTTTGTTGGTGGTTGTATCTTAACGTTATGCTACTCCATGAGGTGTCAAATCAAGTTGTTTGCTGTTAGAATGTTCTTGTCTTCTTACAACTCAAGGTCTTTATTGGTGGGTCTATCTTTTCATGATTGCTCAATGCCATGCCACCCTTATAACTGTGGCCTGCGGAATGAAGTTATATCAATTTCTGCGCGGATCCGTCGTTTTTTTGGATTGGATTGCTTTCTTTTCCTTGCAAAATTGTCTTCAGCGAATGTTTTATTGCACACCTCTCTCTAATTCGTGCTTTTAGTAGACACTTTATGAAATTGGGAAGTTTATTTATTAATCTCTAGTCCTCAGATACATTGGCATATCTTCCCATCTCTGATAAGATAGCATACGTCTATCATATCCCAAATAGGAAAAATCCTAGAGATACACATTTAACTGCTCAAATTATGTGAAGATGTTCAGTAGTTTTCGTGCTCACTTATCGAGATGCTGTTTCCTCTTTATCCAAAGCTTCTATAGAAATGTATATCACTCATCCCAATAGGGGCCACTTTGATCTTTCATTCAAATGCATTGTGGGATCAACTGTTTCTTCTTTATTTGGCAGGAAATTGCGAAGCGATTGCCACGACCAACTTCCTCATGATTGAAAACCGCTGTGACATTAATTATTTAATCAGCTCAGCAGCATATTTTACAGGAAATCGCTTTGCTCCCATGTGATCTGTATAGTGTGGTGAGTCCTGCAGTCTTTCGCTTTGTTATTTGCTTTGACTTGTTGATATTCAATCTAAAGTGTAACAAATGGTGAAAGATTCATTCCCCTTTAAACCATAAACTGCATTTGTAGACTATATTTTCTCTGGATTCTTAGAAAAAAAGGTAGATTTTTTTTTTCTTTTTACATGGGTTTCTGTTGGAGTGCAAACATTTTACGGATCAAATAAAGCATCATGTATTGCAATTTGGTTCTTTT

mRNA sequence

GACGGGACTTCTGGGCGATCGGGTGGGCTTAATCCAGAGAACAGTGCAGATGATTCCAAGAATTTACGCGTCAAGCTTGTCCTGCTGGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGACCCAACATCTAAGGTAACTGTTGGAGCATCATTCTTGTCACAAACAATAGCTTTGCAAGATTCCACAACAGTGAAGTTTGAAATATGGGACACCGCTGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAAGCCAAGATTCCTTCGCTAAAGCACAATATTGGGTTAAGGAGCTACAAAAGCATGGCAGCCCTGATATTATTTTGGCATTGGTCGGTAACAAAGCTGATCTTCAAGAGAAAAGGAAAGTGTCTGTTGAGGATGGCACTGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAAACTTCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAAATTGCGAAGCGATTGCCACGACCAACTTCCTCATGATTGAAAACCGCTGTGACATTAATTATTTAATCAGCTCAGCAGCATATTTTACAGGAAATCGCTTTGCTCCCATGTGATCTGTATAGTGTGGTGAGTCCTGCAGTCTTTCGCTTTGTTATTTGCTTTGACTTGTTGATATTCAATCTAAAGTGTAACAAATGGTGAAAGATTCATTCCCCTTTAAACCATAAACTGCATTTGTAGACTATATTTTCTCTGGATTCTTAGAAAAAAAGGTAGATTTTTTTTTTCTTTTTACATGGGTTTCTGTTGGAGTGCAAACATTTTACGGATCAAATAAAGCATCATGTATTGCAATTTGGTTCTTTT

Coding sequence (CDS)

GACGGGACTTCTGGGCGATCGGGTGGGCTTAATCCAGAGAACAGTGCAGATGATTCCAAGAATTTACGCGTCAAGCTTGTCCTGCTGGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGACCCAACATCTAAGGTAACTGTTGGAGCATCATTCTTGTCACAAACAATAGCTTTGCAAGATTCCACAACAGTGAAGTTTGAAATATGGGACACCGCTGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTATTGTATATGATATAACAAGCCAAGATTCCTTCGCTAAAGCACAATATTGGGTTAAGGAGCTACAAAAGCATGGCAGCCCTGATATTATTTTGGCATTGGTCGGTAACAAAGCTGATCTTCAAGAGAAAAGGAAAGTGTCTGTTGAGGATGGCACTGAGTATGCAGAGAAGAATGGAATGTTCTTTATTGAAACTTCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAAATTGCGAAGCGATTGCCACGACCAACTTCCTCATGA

Protein sequence

DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPRPTSS

Homology

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BLAST of MC04g1478 vs. ExPASy Swiss-Prot
Match: Q9CB01 (Ras-related protein RABF1 OS=Arabidopsis thaliana OX=3702 GN=RABF1 PE=1 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 8.0e-84
Identity = 163/193 (84.46%), Postives = 171/193 (88.60%), Query Frame = 0


Query: 1   DGTSGRSGGL-NPENSAD-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 60
           D  SG   GL N EN+   D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD TSKVTVGA
Sbjct: 9   DRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGA 68

Query: 61  SFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYW 120
           SFLSQTIALQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDITS +SF KAQYW
Sbjct: 69  SFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYW 128

Query: 121 VKELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELF 180
           VKELQKHGSPDI++ALVGNKADL EKR+V  EDG E AEKNGMFFIETSAKTADNIN+LF
Sbjct: 129 VKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188

Query: 181 EEIAKRLPRPTSS 192
           EEI KRLPRP  S
Sbjct: 189 EEIGKRLPRPAPS 201

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BLAST of MC04g1478 vs. ExPASy Swiss-Prot
Match: P31583 (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.0e-58
Identity = 109/173 (63.01%), Postives = 142/173 (82.08%), Query Frame = 0


Query: 15  SADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVK 74
           ++    NL  KLVLLGD G GKS +V+RFV+GQF    + T+GA+F S T+A+ ++ TVK
Sbjct: 2   ASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAV-NNATVK 61

Query: 75  FEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVKELQKHGSPDIILAL 134
           FEIWDTAGQERY +LAP+YYRGAA A+IVYDITS DSFA+A+ WV+ELQK G+P++++AL
Sbjct: 62  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMAL 121

Query: 135 VGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 188
            GNKADL+++RKV+ E+   YAE+NG+FF+ETSAKTA N+N +F EIAKRLPR
Sbjct: 122 AGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPR 173

[Close]

BLAST of MC04g1478 vs. ExPASy Swiss-Prot
Match: P29687 (Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 9.8e-58
Identity = 107/167 (64.07%), Postives = 140/167 (83.83%), Query Frame = 0


Query: 21  NLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDT 80
           NL  KLVLLGD G GKS +V+RFV+GQF    + T+GA+F S T+++ ++ TVKFEIWDT
Sbjct: 8   NLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSV-NNATVKFEIWDT 67

Query: 81  AGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVKELQKHGSPDIILALVGNKAD 140
           AGQERY +LAP+YYRGAA A+IVYDITS +S A+A+ WV+ELQK G+P++++AL GNKAD
Sbjct: 68  AGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMALAGNKAD 127

Query: 141 LQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 188
           L++KRKV+ E+   YAE+NG+FF+ETSAKTA N+N++F EIAKRLPR
Sbjct: 128 LEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPR 173

[Close]

BLAST of MC04g1478 vs. ExPASy Swiss-Prot
Match: Q58DS9 (Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.4e-57
Identity = 109/184 (59.24%), Postives = 140/184 (76.09%), Query Frame = 0


Query: 4   SGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 63
           +GR G   P   A  +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 64  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVKELQ 123
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT+ D+FA+A+ WVKELQ
Sbjct: 62  TVCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 124 KHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEEIAK 183
           +  SP+I++AL GNKADL  KR V  ++   YAE N + F+ETSAKTA N+NE+F  IAK
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAK 181

Query: 184 RLPR 188
           +LP+
Sbjct: 182 KLPK 184

[Close]

BLAST of MC04g1478 vs. ExPASy Swiss-Prot
Match: P51147 (Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-56
Identity = 108/184 (58.70%), Postives = 140/184 (76.09%), Query Frame = 0


Query: 4   SGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 63
           +GR G   P   A  +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 64  TIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVKELQ 123
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A++VYDIT+ D+FA+A+ WVKELQ
Sbjct: 62  TVCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 124 KHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEEIAK 183
           +  SP+I++AL GNKADL  KR V  ++   YA+ N + F+ETSAKTA N+NE+F  IAK
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 181

Query: 184 RLPR 188
           +LP+
Sbjct: 182 KLPK 184

[Close]

BLAST of MC04g1478 vs. NCBI nr
Match: XP_022134238.1 (ras-related protein RABF1 [Momordica charantia])

HSP 1 Score: 372 bits (956), Expect = 8.23e-130
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF
Sbjct: 9   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. NCBI nr
Match: XP_008456515.1 (PREDICTED: ras-related protein RABF1 [Cucumis melo])

HSP 1 Score: 361 bits (927), Expect = 2.17e-125
Identity = 186/191 (97.38%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           D  SGRSGGLNPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF
Sbjct: 9   DRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITS DSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKVSV+DGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. NCBI nr
Match: XP_038884272.1 (ras-related protein RABF1 [Benincasa hispida])

HSP 1 Score: 360 bits (924), Expect = 6.22e-125
Identity = 185/191 (96.86%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           D  SGRSGGLNPEN+A DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF
Sbjct: 9   DRASGRSGGLNPENNAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITS DSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKVSV+DGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. NCBI nr
Match: XP_004140073.1 (ras-related protein RABF1 [Cucumis sativus] >KGN47841.1 hypothetical protein Csa_002805 [Cucumis sativus])

HSP 1 Score: 360 bits (924), Expect = 6.22e-125
Identity = 185/191 (96.86%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           D  SGRSGGLNPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF
Sbjct: 9   DRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITS DSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKV+V+DGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVTVQDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. NCBI nr
Match: XP_022956144.1 (ras-related protein RABF1-like [Cucurbita moschata] >KAG6602301.1 Ras-related protein RABF1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032982.1 Ras-related protein RABF1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357 bits (917), Expect = 7.26e-124
Identity = 184/191 (96.34%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           D  SG SGG+NPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF
Sbjct: 9   DRASGPSGGVNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITS DSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKVSV+DGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. ExPASy TrEMBL
Match: A0A6J1C1E6 (ras-related protein RABF1 OS=Momordica charantia OX=3673 GN=LOC111006544 PE=4 SV=1)

HSP 1 Score: 372 bits (956), Expect = 3.98e-130
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF
Sbjct: 9   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. ExPASy TrEMBL
Match: A0A1S3C444 (ras-related protein RABF1 OS=Cucumis melo OX=3656 GN=LOC103496444 PE=4 SV=1)

HSP 1 Score: 361 bits (927), Expect = 1.05e-125
Identity = 186/191 (97.38%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           D  SGRSGGLNPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF
Sbjct: 9   DRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITS DSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKVSV+DGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. ExPASy TrEMBL
Match: A0A0A0KJ92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406530 PE=4 SV=1)

HSP 1 Score: 360 bits (924), Expect = 3.01e-125
Identity = 185/191 (96.86%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           D  SGRSGGLNPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF
Sbjct: 9   DRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITS DSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKV+V+DGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVTVQDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. ExPASy TrEMBL
Match: A0A6J1GY77 (ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111457920 PE=4 SV=1)

HSP 1 Score: 357 bits (917), Expect = 3.52e-124
Identity = 184/191 (96.34%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           D  SG SGG+NPENSA DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF
Sbjct: 9   DRASGPSGGVNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITS DSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKVSV+DGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. ExPASy TrEMBL
Match: A0A6J1JQ66 (ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111487316 PE=4 SV=1)

HSP 1 Score: 355 bits (910), Expect = 4.10e-123
Identity = 182/191 (95.29%), Postives = 185/191 (96.86%), Query Frame = 0


Query: 1   DGTSGRSGGLNPENSADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASF 60
           D  SG SGG+NPENSA DSKNLRVKLVLLGDSGVGKSCIVL FVRGQFDPTSKVTVGASF
Sbjct: 9   DRASGPSGGVNPENSAADSKNLRVKLVLLGDSGVGKSCIVLSFVRGQFDPTSKVTVGASF 68

Query: 61  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVK 120
           LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITS DSFAKAQYWVK
Sbjct: 69  LSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSFAKAQYWVK 128

Query: 121 ELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEE 180
           ELQKHGSPDIILALVGNKADLQEKRKVS++DGTEYAEKNGMFFIETSAKTADNINELFEE
Sbjct: 129 ELQKHGSPDIILALVGNKADLQEKRKVSIQDGTEYAEKNGMFFIETSAKTADNINELFEE 188

Query: 181 IAKRLPRPTSS 191
           IAKRLPRPTSS
Sbjct: 189 IAKRLPRPTSS 199

[Close]

BLAST of MC04g1478 vs. TAIR 10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 311.2 bits (796), Expect = 5.7e-85
Identity = 163/193 (84.46%), Postives = 171/193 (88.60%), Query Frame = 0


Query: 1   DGTSGRSGGL-NPENSAD-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 60
           D  SG   GL N EN+   D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD TSKVTVGA
Sbjct: 9   DRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGA 68

Query: 61  SFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYW 120
           SFLSQTIALQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDITS +SF KAQYW
Sbjct: 69  SFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYW 128

Query: 121 VKELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELF 180
           VKELQKHGSPDI++ALVGNKADL EKR+V  EDG E AEKNGMFFIETSAKTADNIN+LF
Sbjct: 129 VKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188

Query: 181 EEIAKRLPRPTSS 192
           EEI KRLPRP  S
Sbjct: 189 EEIGKRLPRPAPS 201

[Close]

BLAST of MC04g1478 vs. TAIR 10
Match: AT3G54840.2 (Ras-related small GTP-binding family protein )

HSP 1 Score: 294.3 bits (752), Expect = 7.2e-80
Identity = 154/181 (85.08%), Postives = 162/181 (89.50%), Query Frame = 0


Query: 1   DGTSGRSGGL-NPENSAD-DSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGA 60
           D  SG   GL N EN+   D+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD TSKVTVGA
Sbjct: 9   DRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGA 68

Query: 61  SFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYW 120
           SFLSQTIALQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAVIVYDITS +SF KAQYW
Sbjct: 69  SFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYW 128

Query: 121 VKELQKHGSPDIILALVGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELF 180
           VKELQKHGSPDI++ALVGNKADL EKR+V  EDG E AEKNGMFFIETSAKTADNIN+LF
Sbjct: 129 VKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188

[Close]

BLAST of MC04g1478 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-56
Identity = 104/173 (60.12%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 15  SADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVK 74
           +A  +K++  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+A+ D+ TVK
Sbjct: 2   AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA-TVK 61

Query: 75  FEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVKELQKHGSPDIILAL 134
           FEIWDTAGQERY +LAP+YYRGAA A+IV+D+T+Q SF +A+ WV+ELQ  G+P++++AL
Sbjct: 62  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 121

Query: 135 VGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 188
            GNK+DL + RKV+ ED   YA++NG+FF+ETSAKTA N+ E+F EIA+RLPR
Sbjct: 122 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173

[Close]

BLAST of MC04g1478 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 )

HSP 1 Score: 216.9 bits (551), Expect = 1.5e-56
Identity = 105/173 (60.69%), Postives = 139/173 (80.35%), Query Frame = 0


Query: 15  SADDSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVK 74
           ++  +KN+  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+A+ D+ TVK
Sbjct: 2   ASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA-TVK 61

Query: 75  FEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVKELQKHGSPDIILAL 134
           FEIWDTAGQERY +LAP+YYRGAA A+IV+DIT+Q SF +A+ WV+ELQ  G+P++++AL
Sbjct: 62  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 121

Query: 135 VGNKADLQEKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLPR 188
            GNKADL + RKVS E+   YA++N +FF+ETSAKTA N+ ++F EIAKRLPR
Sbjct: 122 AGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPR 173

[Close]

BLAST of MC04g1478 vs. TAIR 10
Match: AT2G22290.1 (RAB GTPase homolog H1D )

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-40
Identity = 79/164 (48.17%), Postives = 113/164 (68.90%), Query Frame = 0


Query: 23  RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAG 82
           + KLV LGD  VGK+ I+ RF+  +FD T + T+G  FLS+T+ L+D  TV+ ++WDTAG
Sbjct: 9   KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLED-RTVRLQLWDTAG 68

Query: 83  QERYAALAPLYYRGAAVAVIVYDITSQDSFAKAQYWVKELQKHGSPDIILALVGNKADLQ 142
           QER+ +L P Y R ++VAV+VYD+ ++ SF     W++E++   + D+I+ LVGNK DL 
Sbjct: 69  QERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLVGNKTDLV 128

Query: 143 EKRKVSVEDGTEYAEKNGMFFIETSAKTADNINELFEEIAKRLP 187
           EKR+VS+E+G     + G+ FIETSAK   NI  LF +IA  LP
Sbjct: 129 EKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALP 171

The following BLAST results are available for this feature:

BLAST of MC04g1478 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CB01	8.0e-84	84.46	Ras-related protein RABF1 OS=Arabidopsis thaliana OX=3702 GN=RABF1 PE=1 SV=1	[more]
P31583	2.0e-58	63.01	Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1	[more]
P29687	9.8e-58	64.07	Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1	[more]
Q58DS9	6.4e-57	59.24	Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1	[more]
P51147	1.4e-56	58.70	Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1	[more]

BLAST of MC04g1478 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134238.1	8.23e-130	100.00	ras-related protein RABF1 [Momordica charantia]	[more]
XP_008456515.1	2.17e-125	97.38	PREDICTED: ras-related protein RABF1 [Cucumis melo]	[more]
XP_038884272.1	6.22e-125	96.86	ras-related protein RABF1 [Benincasa hispida]	[more]
XP_004140073.1	6.22e-125	96.86	ras-related protein RABF1 [Cucumis sativus] >KGN47841.1 hypothetical protein Csa...	[more]
XP_022956144.1	7.26e-124	96.34	ras-related protein RABF1-like [Cucurbita moschata] >KAG6602301.1 Ras-related pr...	[more]

BLAST of MC04g1478 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1E6	3.98e-130	100.00	ras-related protein RABF1 OS=Momordica charantia OX=3673 GN=LOC111006544 PE=4 SV...	[more]
A0A1S3C444	1.05e-125	97.38	ras-related protein RABF1 OS=Cucumis melo OX=3656 GN=LOC103496444 PE=4 SV=1	[more]
A0A0A0KJ92	3.01e-125	96.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406530 PE=4 SV=1	[more]
A0A6J1GY77	3.52e-124	96.34	ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111457920 PE=...	[more]
A0A6J1JQ66	4.10e-123	95.29	ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111487316 PE=4 ...	[more]

BLAST of MC04g1478 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54840.1	5.7e-85	84.46	Ras-related small GTP-binding family protein	[more]
AT3G54840.2	7.2e-80	85.08	Ras-related small GTP-binding family protein	[more]
AT4G19640.1	1.1e-56	60.12	Ras-related small GTP-binding family protein	[more]
AT5G45130.1	1.5e-56	60.69	RAB homolog 1	[more]
AT2G22290.1	3.3e-40	48.17	RAB GTPase homolog H1D	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 128..141 score: 49.71 coord: 163..185 score: 39.69 coord: 24..45 score: 50.56 coord: 66..88 score: 46.44 coord: 47..63 score: 27.15
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 29..189 e-value: 0.0097 score: -8.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 25..188 e-value: 5.2E-29 score: 112.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 24..188 e-value: 6.3E-82 score: 288.2
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 8..190
None	No IPR available	PANTHER	PTHR47978:SF10	RAB FAMILY GTPASE	coord: 8..190
None	No IPR available	PROSITE	PS51420	RHO	coord: 17..189 score: 9.375759
None	No IPR available	PROSITE	PS51419	RAB	coord: 19..191 score: 33.031132
None	No IPR available	CDD	cd01860	Rab5_related	coord: 23..186 e-value: 1.91899E-110 score: 310.252
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 26..188 e-value: 1.2E-12 score: 42.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 25..185 e-value: 5.6E-59 score: 198.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 13..191 score: 17.06164
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 24..181 e-value: 1.5E-27 score: 94.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 14..191 e-value: 2.3E-66 score: 224.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 20..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1478.1	MC04g1478.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding