MC04g1438 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1438
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RRM domain-containing protein
Location	MC04: 22326142 .. 22329727 (-)
RNA-Seq Expression	MC04g1438
Synteny	MC04g1438

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACAACCTGACAACCCAACCCCGGGTTGGTCATTAAATTCGGATCTCTCAACTCTGAATTTTTGGTTGGCCTGAGAAACCTGACCTAATCCAACCCAATCCATGAAAAAAAAAAAAAAAAACCAACCCGATTTCTAAATAGATCTCCAGCCCTTGGGCCATCCCAGCCCAGGCTTCTTAATTACACGAATATTTATTTAAAGAAAAAAAAAGATACTGAACAAGGGCATTTGTGGAAAAGTCCAACCTCTCGAAACGAAACGCTGCGTTTAATCTTTAGGGAAATCGAAAATCCCAATTCCTCGACCTTCTCTTCTCTGTGATTCCGCCGCCTCCAGTTCTCTTGCAGCTCAGTTCTCTCCAAACCCTAATAGTTCGTTTTTCTTCCCCTCTTAAACCCTAATATTTTCGCTTCCAATCCATATCCTCTATCTCTCTACCTTTCTATTTTAATTTTGAAGTTCTGAGATATAATTCTTTTCCGCTCTGAATTTGCTGAGTTTGCCGCGAAAATTTGCTGGCAATTTGGGGGTACGCTTCTTTTTGTTGAACTTTTTGATTATTTGCTTGTTTCAGTTCAATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTGAATAAGGCTACTTCTTTATTGTCTGAGAAGAAGGAATCTGCCGATTTCTTGGTATTTACCGTTGTACCTCTGCCTCAGATTTTGATTCTATTTTTGGTTATTTCTATGTAATTGTTTCTTACTTTTATCTCTGATTTTTCTCTCTTCAAGCCGTTGGTTGGGGGCCCTGGCCGCAAGTTACCGGCACAAAAGCCACTGGAAAATACTGCTACTGTTTTGTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGTTTGCCACTGACATTATACGTTGAATGAAATTGGAAGTGTGTCTTGTGAATATTCGAAGTATAAGCTTCTCATTCTCTTGCTTGCTAGGTCTTAACGTTAAAGTTTTTGACAGGGTTTTTTGGACAGTTTGGTAAAGTCAAGAGATTAAGAATTGCACGAAATAAAAAGGTAAGACTCATATCTGCAAAACGTTCTTCAAAAGAAAATATGTTTGCAGCAGAATGTTGCATTGCAAATAAATCGTCAAATTTTACTGATAATTGTAATTTCTCCATTTAATTTCTAACTTTTTTTTCCCACTATCTTCATCCATGCTGTAAGTTATGATCTTTTTTACTTGCAGACTGGGAAGTCAAGGCACTTTGGCTACATTGAATTTGAATCTCCGGAGGTTATATCTATGGACATTTCTGTGTGTAATTTTCTAAATTTTAGTTATTCTTTTTAATCTCTTTCACTTTATCCTGAATTTGGATTCTGTGAGCGCAGGTGGCAAAAATTGTAGCTGATTCTATGCATAACTATCTGTTGTATGAACACATTCTGAAAGTCCATCTAATTCCTCCCGAACATGTTCATCCAAAGCTGTAAGTAATCAATTACATTTCTACTTCTAGATTTCTGCATTATCCCATGTGATGATGTAGTTGTTCGATATTACAAGTAATCAAATGTCGTCATATTGCAGATGGAAAGGTTTTAACTATCGCTACAAGCCTTTAAATTTGTTCGAACTTGAGCGTAAACAGCATAACAAGGTAATAAGCTTGGAAAAATATCTTTTAGACCATAAACAAACATGTCTTTTTACTAGTTTTATGATATTTTTCAGGAAAGGACATTGAGTGAACACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGAGCTGCTGGGATTGAATACGAGTGTCCAGAAATTGTAAGAATTTATTTATTTTCTGAAAGTTTATTAAATTCTAGCTGTTTATTCACCAAACCAAAATTTTCTTATTATCCTTGGAGTTTTAATATTACTATATTAGTATATAGTTACTTCATTCCTCAGCCAGCCGATTGCTGTTCTTGTGATCAAACTTAATTCTCATGCAAATAACAACTAAGGTTCTTTTATATGGTTGCCTATAATTAGCCCCCAAGGATTCTTTTGTAATTACTCATTAAGCTCTATCCTCCATAATTGGAGGGCTTTCATGTAATAGCTTCTTTGGGGAGGGGTTCTCTCTACTCCTCGCCCCTAGGCTGTCCTTTTGTGATTAATACATATTTTTTCCGTTTCTTATCAAAAAAAAAAAAAAAAAAAAGAAAAAAACCTATTAGCTTCCAAGGGGCAGCCCAATTAAGGACTTGAGGTTTTTTGGTCATACTAGCTTAGATCTGAAGTTTGAATCTTCTAGTGAGTTTAATACTAAAAATCGTTGATGTCTCTTGGGTCTGAACCTTGGGGTGGGCATGGGTGCCCTTGGGTTTAGGGGAGCAAAGCTCCAACTCCTTGTTCTAAAAAAAAGAAGTTGCCTCCACTCCAATTAGGGGTAGGGTCAGGTGTTGAATGTGGTATCCTCACTGTTTTTTTTTAATTGAATAGCTGAACTTTCATCGTGGAAAATGAAATTCAAAGGACCCTACAAAAACAGCAGTCCAAAAAGGAGCCAAATAAAACTAAACCTAACAAAAAGAAAACGAGCTCCAATGAATAAGGTTTACGAGAATTATTACATGAAGTCTAACATACACTCAAAGAGAGACATAGACATGGACTGGGCTTACTTCAAAGACCTTCAGTATTCTCACTGTTTGGCCACTTCGAGCCACTTCTCCCTTTCTTGATTTCCATGTGAAGGATTATGGCCTTCTACTATAAATGGAGATTTTTTATAGATAGCTTTGGGAGATGATATTTAGCTTATTCTTTTATCTATTTGTATAGGTTTTTGAGTTGAAATGAACTGTTTAGTTGGTGTCCACTGTTACGTTGTTTTCCAAGTAATACATGGAGATCTTATATAGACAACTTTATGAGATGATGGTATTTAGCTTATCCTTTATGTTGAGATGAATTTGAAATGAACTGTTTAGTTGAAAGTAACTTGGTTTTATTAGAGTACACTGCTAACCTATTTTGCTTTGAGTACTTGCATGCATAAGAACTTCAGCAACATATGCCCTCATGAGATCCAAACCGAAACTTTTCTAAATTTGAGATTTGGCGTCATGATTTGAATTCCAAACTACCGCCAGGGGTTTCTCCCCTTCTATTAGGCCTTCTGCTGATCTCTAGAGAATTTGCAGGTGGGTAGTGTCCAACCAGCTCCCAAGAAGATCAAGTTTGATGAAGGTTAGAATGAGCGTTTAGTTCTCAGTAGCTATAATATTATCACACCAGAGGATGAAGACGGAGGACGGGGAAAAGTCACGGGCCATTGTGTGTTTCCAGTTTCTTATTGTGAAGCAGGGGCTGTTTCCTACCATCCTTGAATCTCCAAATTTTGATCTTTGGAATGTTTTGTCAAACATACTTTAAATTCTTTAATATGAATTCCCTTCTATATTGAAGCTTTATGCCTCACAATTCTGACTCACAGGGATTGGAAACTGAATAGTAAATTTTGAAGTCGTACCGATGGCGTGCGCCTATCTGGTTCGACATATCGGATACAAATGTATAGGATCTCATGT

mRNA sequence

AAAAAACAACCTGACAACCCAACCCCGGGTTGGTCATTAAATTCGGATCTCTCAACTCTGAATTTTTGGTTGGCCTGAGAAACCTGACCTAATCCAACCCAATCCATGAAAAAAAAAAAAAAAAACCAACCCGATTTCTAAATAGATCTCCAGCCCTTGGGCCATCCCAGCCCAGGCTTCTTAATTACACGAATATTTATTTAAAGAAAAAAAAAGATACTGAACAAGGGCATTTGTGGAAAAGTCCAACCTCTCGAAACGAAACGCTGCGTTTAATCTTTAGGGAAATCGAAAATCCCAATTCCTCGACCTTCTCTTCTCTGTGATTCCGCCGCCTCCAGTTCTCTTGCAGCTCAGTTCTCTCCAAACCCTAATATTCAATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTGAATAAGGCTACTTCTTTATTGTCTGAGAAGAAGGAATCTGCCGATTTCTTGCCGTTGGTTGGGGGCCCTGGCCGCAAGTTACCGGCACAAAAGCCACTGGAAAATACTGCTACTGTTTTGTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTTGGACAGTTTGGTAAAGTCAAGAGATTAAGAATTGCACGAAATAAAAAGACTGGGAAGTCAAGGCACTTTGGCTACATTGAATTTGAATCTCCGGAGGTGGCAAAAATTGTAGCTGATTCTATGCATAACTATCTGTTGTATGAACACATTCTGAAAGTCCATCTAATTCCTCCCGAACATGTTCATCCAAAGCTATGGAAAGGTTTTAACTATCGCTACAAGCCTTTAAATTTGTTCGAACTTGAGCGTAAACAGCATAACAAGGAAAGGACATTGAGTGAACACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGAGCTGCTGGGATTGAATACGAGTGTCCAGAAATTGTGGGTAGTGTCCAACCAGCTCCCAAGAAGATCAAGTTTGATGAAGGTTAGAATGAGCGTTTAGTTCTCAGTAGCTATAATATTATCACACCAGAGGATGAAGACGGAGGACGGGGAAAAGTCACGGGCCATTGTGTGTTTCCAGTTTCTTATTGTGAAGCAGGGGCTGTTTCCTACCATCCTTGAATCTCCAAATTTTGATCTTTGGAATGTTTTGTCAAACATACTTTAAATTCTTTAATATGAATTCCCTTCTATATTGAAGCTTTATGCCTCACAATTCTGACTCACAGGGATTGGAAACTGAATAGTAAATTTTGAAGTCGTACCGATGGCGTGCGCCTATCTGGTTCGACATATCGGATACAAATGTATAGGATCTCATGT

Coding sequence (CDS)

ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTGAATAAGGCTACTTCTTTATTGTCTGAGAAGAAGGAATCTGCCGATTTCTTGCCGTTGGTTGGGGGCCCTGGCCGCAAGTTACCGGCACAAAAGCCACTGGAAAATACTGCTACTGTTTTGTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTTGGACAGTTTGGTAAAGTCAAGAGATTAAGAATTGCACGAAATAAAAAGACTGGGAAGTCAAGGCACTTTGGCTACATTGAATTTGAATCTCCGGAGGTGGCAAAAATTGTAGCTGATTCTATGCATAACTATCTGTTGTATGAACACATTCTGAAAGTCCATCTAATTCCTCCCGAACATGTTCATCCAAAGCTATGGAAAGGTTTTAACTATCGCTACAAGCCTTTAAATTTGTTCGAACTTGAGCGTAAACAGCATAACAAGGAAAGGACATTGAGTGAACACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGAGCTGCTGGGATTGAATACGAGTGTCCAGAAATTGTGGGTAGTGTCCAACCAGCTCCCAAGAAGATCAAGTTTGATGAAGGTTAG

Protein sequence

MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVGSVQPAPKKIKFDEG

Homology

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BLAST of MC04g1438 vs. ExPASy Swiss-Prot
Match: O74978 (Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1827.05c PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.3e-30
Identity = 64/155 (41.29%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 38  RKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYI 97
           +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RN+KTG S+H+ +I
Sbjct: 92  KKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFI 151

Query: 98  EFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQH 157
           EFES +VA +VA++MHNYLLY  +L+  +IP + VH  ++KG +  +K +    + R QH
Sbjct: 152 EFESLDVANVVAETMHNYLLYGKLLQCKVIPEDQVHENMFKGADVPFKRIPHATIARLQH 211

Query: 158 NKERTLSEHRKLVERILKRDQARQKRIRAAGIEYE 193
            K  +  +  KL+ R  ++ + ++++++  GI  E
Sbjct: 212 EKPLSKEKADKLITRHNRKLKLKKRKLKELGITLE 246

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BLAST of MC04g1438 vs. ExPASy Swiss-Prot
Match: Q8JIY8 (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio OX=7955 GN=nifk PE=2 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 2.8e-29
Identity = 68/154 (44.16%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 52  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADS 111
           VLY+G +P G FE +++ +F QFGKV RLR++R+KKTG S+ +G++EFE  EVAKIVA++
Sbjct: 46  VLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAET 105

Query: 112 MHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVE 171
           M+NYL+ E I+K H+IPPE VH KL+ G    +K      + R  +NK  T  + +K+  
Sbjct: 106 MNNYLMGERIIKCHVIPPEKVHEKLFVGSIAGFKKPKYPAVTR--YNKTHTEDDVKKVGT 165

Query: 172 RILKRDQARQKRIRAAGIEYECPEIVGSVQPAPK 206
           ++L ++   +KR+ A GI+Y+ P     + PA K
Sbjct: 166 KLLSKESKLRKRLAAKGIDYDFPGFAAQI-PAKK 196

[Close]

BLAST of MC04g1438 vs. ExPASy Swiss-Prot
Match: Q6GL69 (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis OX=8364 GN=nifk PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-28
Identity = 62/143 (43.36%), Postives = 96/143 (67.13%), Query Frame = 0


Query: 52  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADS 111
           V+YIG IP   +E ++  +F QFG V RLR++R+KKTG S+ + Y+EFE  EVAKIVAD+
Sbjct: 42  VIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADT 101

Query: 112 MHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVE 171
           M+NYL  E +LK   +PPE VHP+L+ G   +++      + R  +NK R+ +E +K+ +
Sbjct: 102 MNNYLFCERLLKCEFVPPEKVHPRLFIGCTAKFRKPTKPAVSR--YNKRRSEAEQKKMTQ 161

Query: 172 RILKRDQARQKRIRAAGIEYECP 195
           R+L ++   +KR+   GI+Y+ P
Sbjct: 162 RMLSKENKVRKRLAEKGIDYDFP 182

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BLAST of MC04g1438 vs. ExPASy Swiss-Prot
Match: Q3SZM1 (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus OX=9913 GN=NIFK PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-27
Identity = 69/184 (37.50%), Postives = 114/184 (61.96%), Query Frame = 0


Query: 16  ATSLLS-EKKESADFLPLVGGPGRKLPAQKPLEN-TATVLYIGRIPHGFFEKEMEGFFGQ 75
           A  LLS   +E A F   V    R+   Q+  +  T  V+Y+G +P   +E ++  +F Q
Sbjct: 8   AKPLLSLNPQEDAKFKKEVAQVRRRATKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQ 67

Query: 76  FGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVH 135
           FG V R R++R+KKTG S+ +G++EFES +VAKI A++M+NYL  E +LK H IPPE VH
Sbjct: 68  FGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAAETMNNYLFGERLLKCHFIPPEKVH 127

Query: 136 PKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYEC 195
            +L++ ++  +K  +   +  K++N+ R+L +  ++ ER  K+++  +KR+   GI+Y  
Sbjct: 128 EELFREWHMPFKRPSYPAV--KRYNQNRSLVQKLRMEERFKKKEKLLRKRLAKKGIDYNF 187

Query: 196 PEIV 198
           P +V
Sbjct: 188 PSLV 189

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BLAST of MC04g1438 vs. ExPASy Swiss-Prot
Match: Q7SYS2 (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis OX=8355 GN=nifk PE=2 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-27
Identity = 73/187 (39.04%), Postives = 113/187 (60.43%), Query Frame = 0


Query: 9   MKKKLNKATSLLS-EKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEM 68
           M ++L ++  LLS + K   DF   V    RK   +K    T  V+YIG IP    E ++
Sbjct: 1   MAEELVQSEKLLSLDPKLQEDFQQKVHDIRRK---RKANALTPGVIYIGHIPKSLIEPQL 60

Query: 69  EGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLI 128
           + +F QFG V RLR++R+KKTG S+ + Y+E+E  EVAKIVAD+M+NYL  E +LK   +
Sbjct: 61  QEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTMNNYLFCERLLKCEFV 120

Query: 129 PPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAA 188
            PE VHP+L+ G N R++      + R  +N +R   E +K+ +R++ ++   +KR+   
Sbjct: 121 TPEKVHPRLFIGCNTRFRKPTKPAVTR--YNSKRNKEEVKKMTQRMISKEYKLRKRLAEK 180

Query: 189 GIEYECP 195
           GI+Y+ P
Sbjct: 181 GIDYDFP 182

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BLAST of MC04g1438 vs. NCBI nr
Match: XP_022134394.1 (uncharacterized RNA-binding protein C1827.05c [Momordica charantia])

HSP 1 Score: 425 bits (1092), Expect = 5.65e-150
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR
Sbjct: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDEG 212
           QKRIRAAGIEYECPEIVGSVQPAPKKIKFDEG
Sbjct: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDEG 212

[Close]

BLAST of MC04g1438 vs. NCBI nr
Match: XP_022993750.1 (uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima])

HSP 1 Score: 394 bits (1013), Expect = 6.27e-138
Identity = 195/211 (92.42%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKL+KATS LS+KKESADFLPL GGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKATSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           +LKVHLI PEHVHPKLWKGFNYR+KPL+  ELERKQHNKERTL EH+KLVERILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFNYRHKPLDWSELERKQHNKERTLDEHKKLVERILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211
           +KRIRAAGI+YECPEIVGSVQPAPKKIKFDE
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDE 211

[Close]

BLAST of MC04g1438 vs. NCBI nr
Match: XP_022922397.1 (uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata])

HSP 1 Score: 392 bits (1006), Expect = 7.31e-137
Identity = 196/211 (92.89%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERK+HNKERTL EHRKLVERILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211
           QKRIRAAGI+YECPEIVGSVQP PKKIKFDE
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDE 211

[Close]

BLAST of MC04g1438 vs. NCBI nr
Match: XP_008456579.1 (PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo])

HSP 1 Score: 389 bits (998), Expect = 1.21e-135
Identity = 193/211 (91.47%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKL KAT L S+KKESADFLPL GGPGRKLP QKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERKQHNKERTL EH+KLV+RILKRDQAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211
           QKRIRAAGI+YECPEIVGSVQP PKKIKFDE
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDE 211

[Close]

BLAST of MC04g1438 vs. NCBI nr
Match: XP_023525015.1 (MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389 bits (998), Expect = 1.21e-135
Identity = 195/211 (92.42%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERK+ NKERTL EHRKLVERILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKQNKERTLGEHRKLVERILKRNQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211
           QKRIRAAGI+YECPEIVGSVQP PKKIKFDE
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDE 211

[Close]

BLAST of MC04g1438 vs. ExPASy TrEMBL
Match: A0A6J1BYN0 (uncharacterized RNA-binding protein C1827.05c OS=Momordica charantia OX=3673 GN=LOC111006666 PE=4 SV=1)

HSP 1 Score: 425 bits (1092), Expect = 2.74e-150
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR
Sbjct: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDEG 212
           QKRIRAAGIEYECPEIVGSVQPAPKKIKFDEG
Sbjct: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDEG 212

[Close]

BLAST of MC04g1438 vs. ExPASy TrEMBL
Match: A0A6J1JZE0 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita maxima OX=3661 GN=LOC111489660 PE=4 SV=1)

HSP 1 Score: 394 bits (1013), Expect = 3.03e-138
Identity = 195/211 (92.42%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKL+KATS LS+KKESADFLPL GGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKATSSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           +LKVHLI PEHVHPKLWKGFNYR+KPL+  ELERKQHNKERTL EH+KLVERILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFNYRHKPLDWSELERKQHNKERTLDEHKKLVERILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211
           +KRIRAAGI+YECPEIVGSVQPAPKKIKFDE
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDE 211

[Close]

BLAST of MC04g1438 vs. ExPASy TrEMBL
Match: A0A6J1E350 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662 GN=LOC111430401 PE=4 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 3.54e-137
Identity = 196/211 (92.89%), Postives = 202/211 (95.73%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYI RIPH
Sbjct: 1   MGAKAKKAMKKKLNKATSLLSNKKESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEF+SPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFDSPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERK+HNKERTL EHRKLVERILKR+QAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKKHNKERTLGEHRKLVERILKRNQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211
           QKRIRAAGI+YECPEIVGSVQP PKKIKFDE
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDE 211

[Close]

BLAST of MC04g1438 vs. ExPASy TrEMBL
Match: A0A1S3C4U7 (uncharacterized RNA-binding protein C1827.05c OS=Cucumis melo OX=3656 GN=LOC103496493 PE=4 SV=1)

HSP 1 Score: 389 bits (998), Expect = 5.87e-136
Identity = 193/211 (91.47%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKL KAT L S+KKESADFLPL GGPGRKLP QKPLE+TATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLKKATPLSSDKKESADFLPLEGGPGRKLPVQKPLESTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYVEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           ILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERKQHNKERTL EH+KLV+RILKRDQAR
Sbjct: 121 ILKVHLIAPEHVHPKLWKGFNYRHTPLNWSELERKQHNKERTLVEHKKLVDRILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211
           QKRIRAAGI+YECPEIVGSVQP PKKIKFDE
Sbjct: 181 QKRIRAAGIDYECPEIVGSVQPTPKKIKFDE 211

[Close]

BLAST of MC04g1438 vs. ExPASy TrEMBL
Match: A0A6J1FJK1 (uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662 GN=LOC111444637 PE=4 SV=1)

HSP 1 Score: 384 bits (987), Expect = 2.79e-134
Identity = 190/211 (90.05%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPH 60
           MGAKAKKAMKKKL+K T  LS+KKESADFLPL GGPGRKLPAQKPLENTATVLYIGRIPH
Sbjct: 1   MGAKAKKAMKKKLSKVTYSLSDKKESADFLPLEGGPGRKLPAQKPLENTATVLYIGRIPH 60

Query: 61  GFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120
           GFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH
Sbjct: 61  GFFEKEMEGFFGQFGKVKRIRIARNRKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEH 120

Query: 121 ILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQAR 180
           +LKVHLI PEHVHPKLWKGF+Y +KPL+  ELERKQHNKERTL EH+KLV RILKRDQAR
Sbjct: 121 LLKVHLISPEHVHPKLWKGFSYHHKPLDWSELERKQHNKERTLDEHKKLVARILKRDQAR 180

Query: 181 QKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 211
           +KRIRAAGI+YECPEIVGSVQPAPKKIKFDE
Sbjct: 181 KKRIRAAGIDYECPEIVGSVQPAPKKIKFDE 211

[Close]

BLAST of MC04g1438 vs. TAIR 10
Match: AT5G04600.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-74
Identity = 137/220 (62.27%), Postives = 172/220 (78.18%), Query Frame = 0


Query: 1   MGAKAKKAMKKKLNKATSLLSEK--------KESADFLPLVGGPGRKLP-AQKPLENTAT 60
           MGAKAKKA+KK + K  +  S          K SADFLPL GGP RK P    PL+N AT
Sbjct: 1   MGAKAKKALKKNMKKVAASASSSQLPLPQNPKPSADFLPLEGGPARKAPVTTPPLQNKAT 60

Query: 61  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADS 120
           VLYIGRIPHGF+E E+E FF QFG VKR+R+ARNKKTGKS+HFG+I+FE PEVA+I A +
Sbjct: 61  VLYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGA 120

Query: 121 MHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVE 180
           M++YLL EH+LKVH+I PE+V P LW+GF   +KP++  ++ER+Q NKERTL EHRK+++
Sbjct: 121 MNDYLLMEHMLKVHVIEPENVKPNLWRGFKCNFKPVDSVQIERRQLNKERTLEEHRKMLQ 180

Query: 181 RILKRDQARQKRIRAAGIEYECPEIVGSVQPAPKKIKFDE 212
           +I+K+DQ R+KRI AAGIEYECPE+VG+ QP PK+IKF E
Sbjct: 181 KIVKKDQKRRKRIEAAGIEYECPELVGNTQPVPKRIKFSE 220

[Close]

BLAST of MC04g1438 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 31/110 (28.18%), Postives = 53/110 (48.18%), Query Frame = 0


Query: 41  PAQKPLENTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIE 100
           P ++ +E+ + +  L+IG I     E+ ++ +FG++G +    I R++ TG++R FG+I 
Sbjct: 3   PEEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIV 62

Query: 101 FESPEVAKIVADSMH-----------------NYLLYEHILKVHLIPPEH 132
           F  P VA+ V    H                   +L  H   +HLI P H
Sbjct: 63  FADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSH 112

[Close]

BLAST of MC04g1438 vs. TAIR 10
Match: AT1G03457.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.4e-06
Identity = 31/97 (31.96%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 31  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTG 90
           P +   G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG
Sbjct: 309 PGISNNGTSIPSSLQTEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATG 368

Query: 91  KSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL 127
            S+ FG+I ++S   A+   ++M+   L    LKV L
Sbjct: 369 ISKCFGFISYDSQAAAQNAINTMNGCQLSGKKLKVQL 405

[Close]

BLAST of MC04g1438 vs. TAIR 10
Match: AT1G03457.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.4e-06
Identity = 31/97 (31.96%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 31  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTG 90
           P +   G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG
Sbjct: 318 PGISNNGTSIPSSLQTEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATG 377

Query: 91  KSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL 127
            S+ FG+I ++S   A+   ++M+   L    LKV L
Sbjct: 378 ISKCFGFISYDSQAAAQNAINTMNGCQLSGKKLKVQL 414

[Close]

BLAST of MC04g1438 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 49.3 bits (116), Expect = 4.5e-06
Identity = 23/62 (37.10%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 53  LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSM 112
           L+IG I     E+ ++ +F  FG+V    I +++ TG++R FG++ F  P VA+IV    
Sbjct: 8   LFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITEK 67

Query: 113 HN 115
           HN
Sbjct: 68  HN 69

The following BLAST results are available for this feature:

BLAST of MC04g1438 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74978	3.3e-30	41.29	Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe (stra...	[more]
Q8JIY8	2.8e-29	44.16	MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio OX=7955 GN=...	[more]
Q6GL69	1.8e-28	43.36	MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis...	[more]
Q3SZM1	2.0e-27	37.50	MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus OX=9913 GN=N...	[more]
Q7SYS2	2.6e-27	39.04	MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis OX=...	[more]

BLAST of MC04g1438 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134394.1	5.65e-150	100.00	uncharacterized RNA-binding protein C1827.05c [Momordica charantia]	[more]
XP_022993750.1	6.27e-138	92.42	uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]	[more]
XP_022922397.1	7.31e-137	92.89	uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]	[more]
XP_008456579.1	1.21e-135	91.47	PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]	[more]
XP_023525015.1	1.21e-135	92.42	MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pep...	[more]

BLAST of MC04g1438 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYN0	2.74e-150	100.00	uncharacterized RNA-binding protein C1827.05c OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1JZE0	3.03e-138	92.42	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1E350	3.54e-137	92.89	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662...	[more]
A0A1S3C4U7	5.87e-136	91.47	uncharacterized RNA-binding protein C1827.05c OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1FJK1	2.79e-134	90.05	uncharacterized RNA-binding protein C1827.05c-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of MC04g1438 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04600.1	1.7e-74	62.27	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	2.0e-06	28.18	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G03457.1	3.4e-06	31.96	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G03457.2	3.4e-06	31.96	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	4.5e-06	37.10	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 6..26
None	No IPR available	PANTHER	PTHR46754:SF9	SUBFAMILY NOT NAMED	coord: 1..210
None	No IPR available	PANTHER	PTHR46754	MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN	coord: 1..210
None	No IPR available	CDD	cd12307	RRM_NIFK_like	coord: 52..125 e-value: 2.00443E-42 score: 135.78
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 52..125 e-value: 1.5E-19 score: 81.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 53..120 e-value: 2.7E-13 score: 49.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 51..129 score: 14.777537
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 3..126 e-value: 2.8E-21 score: 77.7
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 38..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1438.1	MC04g1438.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding