MC04g1437 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1437
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING-H2 finger protein ATL38-like
Location	MC04: 22313489 .. 22317863 (+)
RNA-Seq Expression	MC04g1437
Synteny	MC04g1437

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGCAGACAACTTGGTATATAAAATGCAGGGAAGTAATTGAATTTGTTTTTTCCCCCATTTCTGTTCCTCAGTTAATAGCGATTTCTATCAAAGGCTGAACAGATTTGATTCTTCCTTTTTAAAAATATATATAAGAACCAAGAAGATTCCATTTCCTTTCCAAATTCCAACACTAGTTGAATTTTCCATTCCACTCTCTCAGTGATTCCAGTTTAAAACTGATATCATATAGTGGGGGTTTTTGGGTTTGTCTCTCAATCTCAATTCAGAGCCAAAATTCTCCAAATGGGTTCTCTCTTTTTCAGTTTCTGCCTCTGCCCAATTCCTCATCCATGGTTCCCACCTTTTTCTCTGGGGTTTTTGCACTCGATCCCACAATAAAACAGTCACTATCTGATATCGACACCCACTTCCGAGCAAATTATTTTCAAAGTTTTAATCTCTTTTTTCCCCCTTCCCCATTTGAGTTGGAGCGTTCTCTGGATATGATTTATCATGGGAATCGAATTCCGTTCTAGTTTCGGCGTGAATGGGATTGAAATTCCTTCCGAGGTTGGAGCAGCTGAAGTGAGCCCGATTCGAGCCGCCATTAGAAGACACTGTTGAATCGAAGGGGAACTGTTTCAACTGGGAAATTCGAGCTTTCGAGAAGTGTGGCAAGAGAAATTTGAGTCGAGGAGAGAAGGGTATTGGGAGTATGATGTCGTCCGGGATAAACTTGGTGATGACCGTGATTGGGTTCACGGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTAGTTTGTGCTCGGATTCATCTCAATGCTTCACGGCGATCCTTCGCAATCGCTTCTAGATCTGATTTCAATGGGGTGAGCTCGTTTTTCTCTATTGAATTTACTTCCAGATTTGATACATGTAGATTCATTTTGTACCGCATCGTTGATTTTCCATTTTGTTGGTCGCTGAGCTGAAGGGGAGCTATTTTTGTTAACTATGTTTCTGGGTTTAATTTTGTATGCTATATCTTTCACTGGAAAATGGATATGATTGCCTCTATGCATTGTAGTTATAGTGCCGCTTAGATACTTACCTTTCTGCCATTTTAGTTGTTAGGTTTCAGTATTCATTTCATACAGTGGTTTTACTCTATTGAATTTTTCCCCTTTTTCGCTCTCTCTCTTTTTGGTCCCGCTGGGGTCAACCTCATACATCTGGATATCATGAGTTGCTGGATTGTCCCTCTTTCATAGGTCTGCTAATGCATTTTCTTGATAGCCTTTTTGGATTGTCGCTTTTAGTCAATTACAAATGGACTGGGAGGTTAGACAGAAACAAAAAGGGTCTCTGAAACTCAATTCTTGTTTGTTCTTATAGGCAGTGGTTGTGCATTTCTATTTCACATTGGTATTCGTCTATTCCTTCTTTTTAAGATACGCTTTTAGATTTCTTTTCACACTTTACGTCGATTTGTTTGTGGACATCTCTTTATTTACGCGTTGAATTTCTTTGTTGCAGCTGGAACGGGGATTACACGGTCTTGAGGCGTTTGCTGTAGCCAACTTTCCAACTAAGAAGTACAGCGATGAATACTTCTCATCTATGAGAAATGCCCAGTACGTGCTCCTTCAATTCACAGCTTCTCACTGCACTGGTTATCATGATTTCTCAAGAAATTTCATTTTATCTGAAAATATACATATAATCAACCATAAATTGCCACCAGAGCATATTGTAATTGAATGGCAGTGAAAATACTTTAATGCTTGTTTCCTGTACAAAGCTAGATATTATTATGGTGTTTGTGAAATTTGAATGATGTATTAATATGATGAGCCTACAATGAATTGGTCTTGAAGTTGATTGGTTTGGCCCTAAGCATAATCATTATGAATATTGGGTGGTAGGATGAGATGTCACAAGCCAGATATTTATCCTTATCAAACTGTTCAGGTGGAAAAGAAAAAAGTAGGAATAAACAGTTTGAGTTGCTTCTGAATGTGATTGGTGGAATGGTTTACCTTTCAGTGATCTCTTGATAATATCTCCAACAAGTTGGTAGAATAATTATTTTTTGATGAGATATTTTGGTAAGTTGGCTTCAAATATGGGAGTAGATTCGGAGAAAAGGTTTACGGGTTAAAATCTTGTATGGTTTGGAACAACGATAATGTGGTAACCTAACGCCTTCTTTCTCTCTCTTAAATACACATCTGCCAAAGATTCGGGATGCGATAATTAGATCTCGGCATGAAGGTGGTGGTAACCCATATGTTCATGTTAGAGTGGACATTATTTGGTGATGTTCCATCACTTTCACTCTGCCTTGTGCCTTCCTTAGGATCAATAAAACTTCACCCATGTCTTCAGGATTAACTTATCTGGGCTAAGGGGGTATACTGGATAAGTTTTGGTTTTCACTTTCAAAACTGGAATTCAAATTTTATTTATCATAGGAAACTTTATAGATCTACTTTGCTTCTAAGAACTCAAGGACAAAGTTGTACAACCTATAGAACAGATGTGGTACTAGTGAAGGAAGGTCGGTATATCTACTCTGCTTCTAGCTCTCATGAAATAACCTTTCGTTGCTTTTATTTGGATTAACTCATTGATCTTGATGTCATCTTGTAAGAGCTACTAAAATTTATGACAAGGAAAAAACTTGATGTCAGGATTCATTTGTTTAAATTTCAAAATATGGGGATTTAGTTATTCTTTCATGATAAGAAGTTAGCTTGTAAATGTAATTTTTTGCTTCTATTCGAATAGTTTACCTTACCCATAAAATGGTTAAAGAAGTTTGAATTAAGAATCTGGATTATGAGCCAAAGCAAGTATAGCTTGGCGGTAATTGGCATATATCTCCAACTAATAGGTTGTGCGTTTGATCCCCACCCCCATATGTTGTACTTTTAAAAAAAATCTGGATTATGCTATAGTTCATTTACTATAGCATAATCTAAATTCTTAATTCAAATGAGATTCTGAAACATAGATTGAATGAGAAGAATGTTTGTGCAAAAACTATATAGAAAGAGAATTTGAATTATGCTATAATCCAAATTTGGATTATGAGAGAAGTCCATTCTCTTGCCTCATGTTTTCTACAGCACCATAGAGACTGTATAGAAGTAAAAATTTGAAACAGAGATTAAAGATGGTTGGTTTGGAATGAGATTCTGTTATCTACAATCATCCATCTTCCCTATAATTTAGCAAATTTGCTATACTATCCATTTCTTTCCTATGTATAAACCATGCACCTAGGCAGAAATTAAGGATCTCCCCCTGAAAGTGAAAAAATTTAAAAACAACAAAAAATCTTGAATGACAAGAATGTCTGTGCAAAAACTAGCTGCAATTGCACCTGTGATTTTTTAAATCAGTTTCTTGCATAGATTTTTTTTTTTAATGATATATAATGCTGCTAGGATTGTTGTTTATGAAGTTTTTGACAAATTTTCTACTTTCTTGAAACTTAGTTTATTCTCTTTCTATATTTTGGTGATGGCTTCCTCTAGTAACACTGCGGGATCGTTTTATCTACAGTACTGTTCTTTGTGATGTATTTTCGAATGATGAAACTGAATGATTAAGAAGTTTAGAGAGCGAGCTTAGTAATTTGTGGCAGAACAGTGAACTTTTGCTGGAATATGAATCTGTTTCAAATGTCAACTAAATTATAATATTTTCAAATGGCAGATGCACAGTTTGCTTGGCAGATTATCACTGTGAAGACATACTGCGCATTCTCCCCTACTGTGGACACTCCTTTCATGTGAACTGCATAGACATATGGCTGCATCAGCACTCGACGTGCCCGGTTTGTCGGGTATCCTTACGCGAGGCCCCAGACAAAAAACGACCGATGCAACCTTTGTTTAGTTCAGCAATTCGCTCTCATTACACCCTCAACTCAAATGTCTGCACTCATCCCTGCGACGGGTTCCCTTTAAGAGACCTTGAAAACAGTGGGCTGGAGCCAATCCAGGAGAACCACTGCTCACCGGGGGCCAATGGAGCAGATTCAACGGAGAACGCTTCCTCATTTGTTGAAGGTAACTCGATTAGTAAAGGCTCAAGAAACAAAAATGTAGAAACATCAAATGCTTGAGATTCTCTGTGGTTTAGCTTATGATAGGGAGTCTGGATTTGGTCAGAGATTGATATTGGGTGTGTCCTAAAAGTAGAGATGTCCTTAACTATCTGCTCAGAAAGTTTGACTGTGTTGTTATTTTACCATTGTATATAAGTGTTGTTGGTTAGAGAATTAGTCTCTGTTGCTGGTTTTGGGCAGTTTTGTTATTTTACCATCAACTTTGCTTTCCATAGTTTCTCTCTCTGTCATATTTATACCAATGCATGGCAGCAGCTGCAGCACAGGAG

mRNA sequence

CAGGCAGACAACTTGGTATATAAAATGCAGGGAAGTAATTGAATTTGTTTTTTCCCCCATTTCTGTTCCTCAGTTAATAGCGATTTCTATCAAAGGCTGAACAGATTTGATTCTTCCTTTTTAAAAATATATATAAGAACCAAGAAGATTCCATTTCCTTTCCAAATTCCAACACTAGTTGAATTTTCCATTCCACTCTCTCAGTGATTCCAGTTTAAAACTGATATCATATAGTGGGGGTTTTTGGGTTTGTCTCTCAATCTCAATTCAGAGCCAAAATTCTCCAAATGGGTTCTCTCTTTTTCAGTTTCTGCCTCTGCCCAATTCCTCATCCATGGTTCCCACCTTTTTCTCTGGGGTTTTTGCACTCGATCCCACAATAAAACAGTCACTATCTGATATCGACACCCACTTCCGAGCAAATTATTTTCAAAGTTTTAATCTCTTTTTTCCCCCTTCCCCATTTGAGTTGGAGCGTTCTCTGGATATGATTTATCATGGGAATCGAATTCCGTTCTAGTTTCGGCGTGAATGGGATTGAAATTCCTTCCGAGGTTGGAGCAGCTGAAGTGAGCCCGATTCGAGCCGCCATTAGAAGACACTGTTGAATCGAAGGGGAACTGTTTCAACTGGGAAATTCGAGCTTTCGAGAAGTGTGGCAAGAGAAATTTGAGTCGAGGAGAGAAGGGTATTGGGAGTATGATGTCGTCCGGGATAAACTTGGTGATGACCGTGATTGGGTTCACGGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTAGTTTGTGCTCGGATTCATCTCAATGCTTCACGGCGATCCTTCGCAATCGCTTCTAGATCTGATTTCAATGGGCTGGAACGGGGATTACACGGTCTTGAGGCGTTTGCTGTAGCCAACTTTCCAACTAAGAAGTACAGCGATGAATACTTCTCATCTATGAGAAATGCCCAATGCACAGTTTGCTTGGCAGATTATCACTGTGAAGACATACTGCGCATTCTCCCCTACTGTGGACACTCCTTTCATGTGAACTGCATAGACATATGGCTGCATCAGCACTCGACGTGCCCGGTTTGTCGGGTATCCTTACGCGAGGCCCCAGACAAAAAACGACCGATGCAACCTTTGTTTAGTTCAGCAATTCGCTCTCATTACACCCTCAACTCAAATGTCTGCACTCATCCCTGCGACGGGTTCCCTTTAAGAGACCTTGAAAACAGTGGGCTGGAGCCAATCCAGGAGAACCACTGCTCACCGGGGGCCAATGGAGCAGATTCAACGGAGAACGCTTCCTCATTTGTTGAAGGTAACTCGATTAGTAAAGGCTCAAGAAACAAAAATGTAGAAACATCAAATGCTTGAGATTCTCTGTGGTTTAGCTTATGATAGGGAGTCTGGATTTGGTCAGAGATTGATATTGGGTGTGTCCTAAAAGTAGAGATGTCCTTAACTATCTGCTCAGAAAGTTTGACTGTGTTGTTATTTTACCATTGTATATAAGTGTTGTTGGTTAGAGAATTAGTCTCTGTTGCTGGTTTTGGGCAGTTTTGTTATTTTACCATCAACTTTGCTTTCCATAGTTTCTCTCTCTGTCATATTTATACCAATGCATGGCAGCAGCTGCAGCACAGGAG

Coding sequence (CDS)

ATGATGTCGTCCGGGATAAACTTGGTGATGACCGTGATTGGGTTCACGGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTAGTTTGTGCTCGGATTCATCTCAATGCTTCACGGCGATCCTTCGCAATCGCTTCTAGATCTGATTTCAATGGGCTGGAACGGGGATTACACGGTCTTGAGGCGTTTGCTGTAGCCAACTTTCCAACTAAGAAGTACAGCGATGAATACTTCTCATCTATGAGAAATGCCCAATGCACAGTTTGCTTGGCAGATTATCACTGTGAAGACATACTGCGCATTCTCCCCTACTGTGGACACTCCTTTCATGTGAACTGCATAGACATATGGCTGCATCAGCACTCGACGTGCCCGGTTTGTCGGGTATCCTTACGCGAGGCCCCAGACAAAAAACGACCGATGCAACCTTTGTTTAGTTCAGCAATTCGCTCTCATTACACCCTCAACTCAAATGTCTGCACTCATCCCTGCGACGGGTTCCCTTTAAGAGACCTTGAAAACAGTGGGCTGGAGCCAATCCAGGAGAACCACTGCTCACCGGGGGCCAATGGAGCAGATTCAACGGAGAACGCTTCCTCATTTGTTGAAGGTAACTCGATTAGTAAAGGCTCAAGAAACAAAAATGTAGAAACATCAAATGCTTGA

Protein sequence

MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEPIQENHCSPGANGADSTENASSFVEGNSISKGSRNKNVETSNA

Homology

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BLAST of MC04g1437 vs. ExPASy Swiss-Prot
Match: O64762 (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 44/142 (30.99%), Postives = 73/142 (51.41%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFA---IASRSDFNGLERGLHGLEAF 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+        + GL+  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  AVANFPTKKYSD--EYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQH 127
            + +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH +C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRVSLREAPDKKRPMQP 145
           STCP+CRV L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

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BLAST of MC04g1437 vs. ExPASy Swiss-Prot
Match: Q9SN28 (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.0e-14
Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 52  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFH 111
           N L     GL        P   Y + +   ++++QC+VCL DY  E+ L+ +P CGH+FH
Sbjct: 78  NNLSTAELGLSKDIREMLPVVIYKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFH 137

Query: 112 VNCIDIWLHQHSTCPVCRVSLREAP 137
           + CID+WL  H+TCP+CR+SL   P
Sbjct: 138 MECIDLWLTSHTTCPLCRLSLIPKP 160

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BLAST of MC04g1437 vs. ExPASy Swiss-Prot
Match: Q9M0R5 (Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.7e-14
Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 23  VFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSM 82
           +F+   +V   +H    R     A +   +   R   GLE   + +FPT  YS+     +
Sbjct: 59  IFISLGMVSCCLHCIFYREEIGAAGQDVLH--SRARRGLEKEVIESFPTFLYSEVKGLKI 118

Query: 83  --RNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKR 142
                +C +CL+++  ++ LR +P C H+FH NCID+WL   STCPVCR +L   P +  
Sbjct: 119 GKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESY 177

[Close]

BLAST of MC04g1437 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 80.1 bits (196), Expect = 3.5e-14
Identity = 39/100 (39.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 47  SRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNA--QCTVCLADYHCEDILRILP 106
           SR+  N   R   GL+   V  FPT  YSD     +     +C +CL ++  ++ LR+LP
Sbjct: 89  SRATVNAAAR---GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLP 148

Query: 107 YCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP 145
            C H FH +CID WL  H TCPVCR +L E   +   ++P
Sbjct: 149 KCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]

BLAST of MC04g1437 vs. ExPASy Swiss-Prot
Match: Q9SN27 (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.5e-14
Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 0


Query: 52  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFH 111
           N L     GL        P   Y + +  ++ + QC+VCL DY  E+ L+ +P CGH+FH
Sbjct: 64  NNLSTAELGLSKDIREMLPIVIYKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFH 123

Query: 112 VNCIDIWLHQHSTCPVCRVSLREAP 137
           + CID+WL  H+TCP+CR+SL   P
Sbjct: 124 MECIDLWLTSHTTCPLCRLSLIPKP 146

[Close]

BLAST of MC04g1437 vs. NCBI nr
Match: XP_022134427.1 (RING-H2 finger protein ATL38-like [Momordica charantia])

HSP 1 Score: 453 bits (1165), Expect = 9.01e-161
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH
Sbjct: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180
           QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP
Sbjct: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180

Query: 181 IQENHCSPGANGADSTENASSFVEGNSISKGSRNKNVETSNA 222
           IQENHCSPGANGADSTENASSFVEGNSISKGSRNKNVETSNA
Sbjct: 181 IQENHCSPGANGADSTENASSFVEGNSISKGSRNKNVETSNA 222

[Close]

BLAST of MC04g1437 vs. NCBI nr
Match: XP_022990455.1 (RING-H2 finger protein ATL74-like [Cucurbita maxima])

HSP 1 Score: 365 bits (936), Expect = 6.76e-126
Identity = 182/220 (82.73%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSD +GLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLHASRRSFLVASRSDLSGLERGQHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           +E F VANFPTKKYSDEYFSSMRNAQCTVCLADYH ED+LRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180
           +HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VC +PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENHCSPGANGA-DSTENASSFVEGNSISKGSRNKNVET 219
           IQEN     ANGA D  ENASSF EGN  SKGSRNKNVE+
Sbjct: 181 IQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVES 216

[Close]

BLAST of MC04g1437 vs. NCBI nr
Match: XP_023524777.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362 bits (930), Expect = 5.55e-125
Identity = 181/218 (83.03%), Postives = 191/218 (87.61%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVC RLVCARIHLNASRRSF +ASRSD +GLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCARLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           +E F VANFPTKKYSDEYFSSMRNAQCTVCLADYH ED+LRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180
           +HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VC +PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENHCSPGANGA-DSTENASSFVEGNSISKGSRNKNV 217
           IQEN     ANGA D  ENASSF EGN  SKGSRNKNV
Sbjct: 181 IQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNV 214

[Close]

BLAST of MC04g1437 vs. NCBI nr
Match: XP_022960827.1 (RING-H2 finger protein ATL74-like [Cucurbita moschata])

HSP 1 Score: 362 bits (928), Expect = 1.12e-124
Identity = 181/218 (83.03%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSD +GLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           +E F VANFPTKKYSDEYFSSMRNAQCTVCLADY+ ED+LRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180
           +HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VC +PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENHCSPGANGA-DSTENASSFVEGNSISKGSRNKNV 217
           IQEN     ANGA D  ENASSF EGN  SKGSRNKNV
Sbjct: 181 IQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNV 214

[Close]

BLAST of MC04g1437 vs. NCBI nr
Match: KAG7032948.1 (RING-H2 finger protein ATL7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361 bits (926), Expect = 2.26e-124
Identity = 178/217 (82.03%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSD +GLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           +E F VANFPTKKYSDEYFSSMRNAQCTVCLADYH ED+LRILPYCGH FHV CIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHFFHVTCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180
           +HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VC +PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENHCSPGANGADSTENASSFVEGNSISKGSRNKNV 217
           IQEN  +  A   D  ENASSF EGN  SKGSRNKNV
Sbjct: 181 IQENQANEAA---DPIENASSFTEGNLNSKGSRNKNV 214

[Close]

BLAST of MC04g1437 vs. ExPASy TrEMBL
Match: A0A6J1BZK6 (RING-H2 finger protein ATL38-like OS=Momordica charantia OX=3673 GN=LOC111006678 PE=4 SV=1)

HSP 1 Score: 453 bits (1165), Expect = 4.36e-161
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH
Sbjct: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180
           QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP
Sbjct: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180

Query: 181 IQENHCSPGANGADSTENASSFVEGNSISKGSRNKNVETSNA 222
           IQENHCSPGANGADSTENASSFVEGNSISKGSRNKNVETSNA
Sbjct: 181 IQENHCSPGANGADSTENASSFVEGNSISKGSRNKNVETSNA 222

[Close]

BLAST of MC04g1437 vs. ExPASy TrEMBL
Match: A0A6J1JQ55 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111487309 PE=4 SV=1)

HSP 1 Score: 365 bits (936), Expect = 3.27e-126
Identity = 182/220 (82.73%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSD +GLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLHASRRSFLVASRSDLSGLERGQHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           +E F VANFPTKKYSDEYFSSMRNAQCTVCLADYH ED+LRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180
           +HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VC +PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENHCSPGANGA-DSTENASSFVEGNSISKGSRNKNVET 219
           IQEN     ANGA D  ENASSF EGN  SKGSRNKNVE+
Sbjct: 181 IQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVES 216

[Close]

BLAST of MC04g1437 vs. ExPASy TrEMBL
Match: A0A6J1H8I0 (RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111461516 PE=4 SV=1)

HSP 1 Score: 362 bits (928), Expect = 5.42e-125
Identity = 181/218 (83.03%), Postives = 192/218 (88.07%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSD +GLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           +E F VANFPTKKYSDEYFSSMRNAQCTVCLADY+ ED+LRILPYCGHSFHV CIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLEP 180
           +HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VC +PC GFPL D EN+GLEP
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLEP 180

Query: 181 IQENHCSPGANGA-DSTENASSFVEGNSISKGSRNKNV 217
           IQEN     ANGA D  ENASSF EGN  SKGSRNKNV
Sbjct: 181 IQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNV 214

[Close]

BLAST of MC04g1437 vs. ExPASy TrEMBL
Match: A0A5D3CKS4 (RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00660 PE=4 SV=1)

HSP 1 Score: 355 bits (910), Expect = 2.79e-122
Identity = 183/221 (82.81%), Postives = 195/221 (88.24%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF IASRSD +GLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           +E   VANFPTKKY+D+YFSSMRNAQCTVCLADYH ED+LRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLE- 180
           QHSTCPVCR+SLRE  DKKR MQPLFSSAIRS   LNS+    PC GFPLRDLEN+GLE 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENHCSPGANGA-DSTENASSFVEGNSISKGSRNKNVET 219
           PIQENH +PGANGA D  ENAS F+EGN  SKG RNKNVE+
Sbjct: 181 PIQENHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVES 214

[Close]

BLAST of MC04g1437 vs. ExPASy TrEMBL
Match: A0A1S3C364 (RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV=1)

HSP 1 Score: 355 bits (910), Expect = 2.79e-122
Identity = 183/221 (82.81%), Postives = 195/221 (88.24%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF IASRSD +GLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH 120
           +E   VANFPTKKY+D+YFSSMRNAQCTVCLADYH ED+LRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCTHPCDGFPLRDLENSGLE- 180
           QHSTCPVCR+SLRE  DKKR MQPLFSSAIRS   LNS+    PC GFPLRDLEN+GLE 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQENHCSPGANGA-DSTENASSFVEGNSISKGSRNKNVET 219
           PIQENH +PGANGA D  ENAS F+EGN  SKG RNKNVE+
Sbjct: 181 PIQENHYTPGANGAVDPIENASPFIEGNQNSKGCRNKNVES 214

[Close]

BLAST of MC04g1437 vs. TAIR 10
Match: AT2G34990.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 44/142 (30.99%), Postives = 73/142 (51.41%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFA---IASRSDFNGLERGLHGLEAF 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+        + GL+  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  AVANFPTKKYSD--EYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQH 127
            + +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH +C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRVSLREAPDKKRPMQP 145
           STCP+CRV L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]

BLAST of MC04g1437 vs. TAIR 10
Match: AT4G10150.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 52  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFH 111
           N L     GL        P   Y + +   ++++QC+VCL DY  E+ L+ +P CGH+FH
Sbjct: 78  NNLSTAELGLSKDIREMLPVVIYKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFH 137

Query: 112 VNCIDIWLHQHSTCPVCRVSLREAP 137
           + CID+WL  H+TCP+CR+SL   P
Sbjct: 138 MECIDLWLTSHTTCPLCRLSLIPKP 160

[Close]

BLAST of MC04g1437 vs. TAIR 10
Match: AT4G09120.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-15
Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 23  VFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSM 82
           +F+   +V   +H    R     A +   +   R   GLE   + +FPT  YS+     +
Sbjct: 59  IFISLGMVSCCLHCIFYREEIGAAGQDVLH--SRARRGLEKEVIESFPTFLYSEVKGLKI 118

Query: 83  --RNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKR 142
                +C +CL+++  ++ LR +P C H+FH NCID+WL   STCPVCR +L   P +  
Sbjct: 119 GKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESY 177

[Close]

BLAST of MC04g1437 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-15
Identity = 39/100 (39.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 47  SRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNA--QCTVCLADYHCEDILRILP 106
           SR+  N   R   GL+   V  FPT  YSD     +     +C +CL ++  ++ LR+LP
Sbjct: 89  SRATVNAAAR---GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLP 148

Query: 107 YCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP 145
            C H FH +CID WL  H TCPVCR +L E   +   ++P
Sbjct: 149 KCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]

BLAST of MC04g1437 vs. TAIR 10
Match: AT4G10160.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-15
Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 0


Query: 52  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFH 111
           N L     GL        P   Y + +  ++ + QC+VCL DY  E+ L+ +P CGH+FH
Sbjct: 64  NNLSTAELGLSKDIREMLPIVIYKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFH 123

Query: 112 VNCIDIWLHQHSTCPVCRVSLREAP 137
           + CID+WL  H+TCP+CR+SL   P
Sbjct: 124 MECIDLWLTSHTTCPLCRLSLIPKP 146

The following BLAST results are available for this feature:

BLAST of MC04g1437 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64762	1.6e-14	30.99	RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1	[more]
Q9SN28	2.0e-14	41.18	RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1	[more]
Q9M0R5	2.7e-14	33.06	Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 P...	[more]
Q8RXX9	3.5e-14	39.00	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q9SN27	4.5e-14	41.18	E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ...	[more]

BLAST of MC04g1437 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134427.1	9.01e-161	100.00	RING-H2 finger protein ATL38-like [Momordica charantia]	[more]
XP_022990455.1	6.76e-126	82.73	RING-H2 finger protein ATL74-like [Cucurbita maxima]	[more]
XP_023524777.1	5.55e-125	83.03	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960827.1	1.12e-124	83.03	RING-H2 finger protein ATL74-like [Cucurbita moschata]	[more]
KAG7032948.1	2.26e-124	82.03	RING-H2 finger protein ATL7 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MC04g1437 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZK6	4.36e-161	100.00	RING-H2 finger protein ATL38-like OS=Momordica charantia OX=3673 GN=LOC111006678...	[more]
A0A6J1JQ55	3.27e-126	82.73	RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111487309 PE...	[more]
A0A6J1H8I0	5.42e-125	83.03	RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111461516 ...	[more]
A0A5D3CKS4	2.79e-122	82.81	RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C364	2.79e-122	82.81	RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV...	[more]

BLAST of MC04g1437 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34990.1	1.1e-15	30.99	RING/U-box superfamily protein	[more]
AT4G10150.1	1.4e-15	41.18	RING/U-box superfamily protein	[more]
AT4G09120.1	1.9e-15	33.06	RING/U-box superfamily protein	[more]
AT3G05200.1	2.5e-15	39.00	RING/U-box superfamily protein	[more]
AT4G10160.1	3.2e-15	41.18	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 87..128 e-value: 2.6E-5 score: 33.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 86..129 e-value: 4.1E-11 score: 43.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 87..129 score: 12.090947
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 53..135 e-value: 6.3E-20 score: 72.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..222
None	No IPR available	PANTHER	PTHR47035:SF3	OS11G0150450 PROTEIN	coord: 1..221
None	No IPR available	PANTHER	PTHR47035	OS11G0150450 PROTEIN	coord: 1..221
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 86..129 e-value: 8.65353E-16 score: 66.5565
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 86..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1437.1	MC04g1437.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane