MC04g1376 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1376
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	MRN complex-interacting protein isoform X1
Location	MC04: 21768576 .. 21771057 (+)
RNA-Seq Expression	MC04g1376
Synteny	MC04g1376

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAATATATTTAGCCGAGAAAATGAGATACTTTTATAACGGAAGAAGCATACCGTACCGACGCCGGCTTTACGGAGAAACGCGGGCGATTTGATTTTTGAAGTTATGAAATGATGCAGGTACCAAAATGGGCCACGAGTTAAGACATGGGCCCAAAATTCCCAAATATAACCAAAATTTGGCGCCAAAATTACTGATCCCTCCAAATCGAAACACAAGCACAGGAAGTCGAAATCCGGATCGAAATCTACAGAGAGCATCGGAGAATCGAGGAAGCTTACTTCGAAGCAAGCAAATGTCGACGATCTTCATCGCCGTCCAGTGTTTCCAATGCTCCACCATGCAGGTACAGATCTCCTTCCTGTTTTTCTCTGCTCCTCTCTCTATCTCTCTCTCTCTGCAAAATCTATGATGGCGGTGGTTCCGATTTAGGTGAAGCAGCAGCGGAGGAGCGGGAATAAATGGAACTGTGCAGTGTGCAACGAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCAATGGCTAAAGACGTCCGTAAATTCGTACAGAGTTTCAACATGTCTCGGAAATATGCGGATGAACAGAAGCAAGTCGAGGAGATAGTACTAGTAGATGGAGTAATTGTTGATGACGGCCAGCTTGCCTGCAGCACGAGGAAAAGGCGTAGCGATTGGAGTGCTTACCTCGATCTCGAGGAAGATCGCAGCCAAAGTGGAAGAGGAAACGAACCAGAAATAGGTCACACATTTCGTAAATGCTTATTTTACCATTTGTTTATTCGAAAACTCCACAACTAAAATCTTCATCAGATGATTAGTTTTTTTTTCTGGAGCAGGGAGTGATTTTGCCGACGTAGAGATCGTGACAGAGCTTCCAGAAGTGAGAGCCAGTAAATCCAAATTAACGTGCCGTTCAAGCTGGTCAGAAGATGGATCAAGAAACGGAGTTTTGGAACCAAATTTCTCAAAGAGGAAACTCATGGCCAAGGATTTGAGCTCCCAAGGTAAAACTTTAAGTGAGTGTAAGTCGGAAGACAGAGAAAGATTAAGCTAAAACGGCCGTAAAATTGCAGATGAGATTCGAAACTGGGAGTCGCCATCAAAATGGAAACAAAGCATCTCAGAAGACGAAGAAAAGGCAAGGACAAAAGCTTGCATAATGGCGAAGATAAGAGGACCTTCCAGTTCCAAGTGGAGTGAATACATAACTGAAGAAGACAACAATGGAGAAAATATGGCAACAGAACCGAGCATGGATATCTTGAAGACGATGACAAATGATGAAATGGTTGAAGATGATATCCACCCCGATTTCAAATGAAAAATCGATCTCAGGAAGAAGTGAAGAAATGGGCAAGATCCTCAAGAACCCTAATTGAATACGTTTTACTTCCTTTAAATTCAATTTCAGACAACTTGATGTCATGCTTAATTTTAGCATTAATATCATAGCTGGTCAAGAGAGCTTTGAAATCTTGAGCCATAAGATCATAAGAACATAAAATCAGAATCAAAATAATAACAATAACAAAAAGATGAAACCATAGTCCTAAATCCCAATAAACTAGATAATTGTCAAAACAGAACTCCAGAGTACCAAAATTCTAAAACATCCAAATGTAGAATAAAATAAATGAATGCAGCCGGTCAAAACAAAACCTCGCAAAATTAAATAGTATCCTAGAGAGTTAATTTAAGGAGGAAAGCTAAAAGAGGAGAAAAAAAGATAAAACCCAACCAGAAATTATGTTCACCATGCGGCATAAAGAATGGTCTAAGGAAAATTGAAGGTCAGGGAACCTGTGCTCATTTGTTTCAATCTCTGTTCATTTGTTCAGGGCCAGTGAAGTGAGCTGATCAGTAAGCTCGGGTTCTGATGTAGCTTTGCGGAGGACTTCCATAGCCTCGGCCACCTTATTCTTCAAGTCATCCGGTGACTCGATGAGATGGAGCACCTCTGGTTGGTCCATCTCCAGCAGCATTCCAGTAACCTTTGCTGCATGACCTGGCTCGAGGCGATCCACGAGTGGATACAGCTGCTCGCCGAGCATCTGTAAAAGGATATAATGTAGAAGAAGAGGTACAGCAGTCAATGATATGTCTCGTCTTTTACAAAGATGGTTTCATATTCTACAATGAAGGGAGGAAAAATGATAACGTACCACACGCTGATTTTCGGGCGTAGCGGAAGCTAATGCAGAAGCAAGTGTTGAAGTAGGCACAGTCCTTGATCGCTGGATGTCGATGGGGGAGCTAGTCACTCCCGAACTCTCAAAAGCCAGAGGCATCATTGGAGGGCCAACAAGACCTTGGGGCAGGACGGGCGATTCCAAACCATTTCGTGCATTGTTCATGTATCTAAAACCTTGTCCAGAGCCACGGAGCACCATCTGGGTTTGCAAAAACGAGTCAACAAATTTATAGGCAAACATCCGAAGAAAAGAAAAAACTTCAGGAGCACTTGGATCAGCAACTGGG

mRNA sequence

CTAAAATATATTTAGCCGAGAAAATGAGATACTTTTATAACGGAAGAAGCATACCGTACCGACGCCGGCTTTACGGAGAAACGCGGGCGATTTGATTTTTGAAGTTATGAAATGATGCAGGTACCAAAATGGGCCACGAGTTAAGACATGGGCCCAAAATTCCCAAATATAACCAAAATTTGGCGCCAAAATTACTGATCCCTCCAAATCGAAACACAAGCACAGGAAGTCGAAATCCGGATCGAAATCTACAGAGAGCATCGGAGAATCGAGGAAGCTTACTTCGAAGCAAGCAAATGTCGACGATCTTCATCGCCGTCCAGTGTTTCCAATGCTCCACCATGCAGGTGAAGCAGCAGCGGAGGAGCGGGAATAAATGGAACTGTGCAGTGTGCAACGAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCAATGGCTAAAGACGTCCGTAAATTCGTACAGAGTTTCAACATGTCTCGGAAATATGCGGATGAACAGAAGCAAGTCGAGGAGATAGTACTAGTAGATGGAGTAATTGTTGATGACGGCCAGCTTGCCTGCAGCACGAGGAAAAGGCGTAGCGATTGGAGTGCTTACCTCGATCTCGAGGAAGATCGCAGCCAAAGTGGAAGAGGAAACGAACCAGAAATAGGGAGTGATTTTGCCGACGTAGAGATCGTGACAGAGCTTCCAGAAGTGAGAGCCAGTAAATCCAAATTAACGTGCCGTTCAAGCTGGTCAGAAGATGGATCAAGAAACGGAGTTTTGGAACCAAATTTCTCAAAGAGGAAACTCATGGCCAAGGATTTGAGCTCCCAAGATGAGATTCGAAACTGGGAGTCGCCATCAAAATGGAAACAAAGCATCTCAGAAGACGAAGAAAAGGCAAGGACAAAAGCTTGCATAATGGCGAAGATAAGAGGACCTTCCAGTTCCAAGTGGAGTGAATACATAACTGAAGAAGACAACAATGGAGAAAATATGGCAACAGAACCGAGCATGGATATCTTGAAGACGATGACAAATGATGAAATGGTTGAAGATGATATCCACCCCGATTTCAAATGAAAAATCGATCTCAGGAAGAAGTGAAGAAATGGGCAAGATCCTCAAGAACCCTAATTGAATACGTTTTACTTCCTTTAAATTCAATTTCAGACAACTTGATGTCATGCTTAATTTTAGCATTAATATCATAGCTGGTCAAGAGAGCTTTGAAATCTTGAGCCATAAGATCATAAGAACATAAAATCAGAATCAAAATAATAACAATAACAAAAAGATGAAACCATAGTCCTAAATCCCAATAAACTAGATAATTGTCAAAACAGAACTCCAGAGTACCAAAATTCTAAAACATCCAAATGTAGAATAAAATAAATGAATGCAGCCGGTCAAAACAAAACCTCGCAAAATTAAATAGTATCCTAGAGAGTTAATTTAAGGAGGAAAGCTAAAAGAGGAGAAAAAAAGATAAAACCCAACCAGAAATTATGTTCACCATGCGGCATAAAGAATGGTCTAAGGAAAATTGAAGGTCAGGGAACCTGTGCTCATTTGTTTCAATCTCTGTTCATTTGTTCAGGGCCAGTGAAGTGAGCTGATCAGTAAGCTCGGGTTCTGATGTAGCTTTGCGGAGGACTTCCATAGCCTCGGCCACCTTATTCTTCAAGTCATCCGGTGACTCGATGAGATGGAGCACCTCTGGTTGGTCCATCTCCAGCAGCATTCCAGTAACCTTTGCTGCATGACCTGGCTCGAGGCGATCCACGAGTGGATACAGCTGCTCGCCGAGCATCTGTAAAAGGATATAATGTAGAAGAAGAGGTACAGCAGTCAATGATATGTCTCGTCTTTTACAAAGATGGTTTCATATTCTACAATGAAGGGAGGAAAAATGATAACGTACCACACGCTGATTTTCGGGCGTAGCGGAAGCTAATGCAGAAGCAAGTGTTGAAGTAGGCACAGTCCTTGATCGCTGGATGTCGATGGGGGAGCTAGTCACTCCCGAACTCTCAAAAGCCAGAGGCATCATTGGAGGGCCAACAAGACCTTGGGGCAGGACGGGCGATTCCAAACCATTTCGTGCATTGTTCATGTATCTAAAACCTTGTCCAGAGCCACGGAGCACCATCTGGGTTTGCAAAAACGAGTCAACAAATTTATAGGCAAACATCCGAAGAAAAGAAAAAACTTCAGGAGCACTTGGATCAGCAACTGGG

Coding sequence (CDS)

ATGGGCCACGAGTTAAGACATGGGCCCAAAATTCCCAAATATAACCAAAATTTGGCGCCAAAATTACTGATCCCTCCAAATCGAAACACAAGCACAGGAAGTCGAAATCCGGATCGAAATCTACAGAGAGCATCGGAGAATCGAGGAAGCTTACTTCGAAGCAAGCAAATGTCGACGATCTTCATCGCCGTCCAGTGTTTCCAATGCTCCACCATGCAGGTGAAGCAGCAGCGGAGGAGCGGGAATAAATGGAACTGTGCAGTGTGCAACGAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCAATGGCTAAAGACGTCCGTAAATTCGTACAGAGTTTCAACATGTCTCGGAAATATGCGGATGAACAGAAGCAAGTCGAGGAGATAGTACTAGTAGATGGAGTAATTGTTGATGACGGCCAGCTTGCCTGCAGCACGAGGAAAAGGCGTAGCGATTGGAGTGCTTACCTCGATCTCGAGGAAGATCGCAGCCAAAGTGGAAGAGGAAACGAACCAGAAATAGGGAGTGATTTTGCCGACGTAGAGATCGTGACAGAGCTTCCAGAAGTGAGAGCCAGTAAATCCAAATTAACGTGCCGTTCAAGCTGGTCAGAAGATGGATCAAGAAACGGAGTTTTGGAACCAAATTTCTCAAAGAGGAAACTCATGGCCAAGGATTTGAGCTCCCAAGATGAGATTCGAAACTGGGAGTCGCCATCAAAATGGAAACAAAGCATCTCAGAAGACGAAGAAAAGGCAAGGACAAAAGCTTGCATAATGGCGAAGATAAGAGGACCTTCCAGTTCCAAGTGGAGTGAATACATAACTGAAGAAGACAACAATGGAGAAAATATGGCAACAGAACCGAGCATGGATATCTTGAAGACGATGACAAATGATGAAATGGTTGAAGATGATATCCACCCCGATTTCAAATGA

Protein sequence

MGHELRHGPKIPKYNQNLAPKLLIPPNRNTSTGSRNPDRNLQRASENRGSLLRSKQMSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRSQSGRGNEPEIGSDFADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEIRNWESPSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDNNGENMATEPSMDILKTMTNDEMVEDDIHPDFK

Homology

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BLAST of MC04g1376 vs. ExPASy Swiss-Prot
Match: Q32PP1 (MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.9e-07
Identity = 46/142 (32.39%), Postives = 63/142 (44.37%), Query Frame = 0


Query: 61  FIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRK 120
           F  ++CF C T QV QQ +   KW C VC EKQS+ K F R   A D R+ VQ  N  R 
Sbjct: 5   FNVLRCFSCQTFQV-QQVKKAKKWTCKVCGEKQSLIKEFGRG-AAADCRRHVQKLNALR- 64

Query: 121 YADEQKQVE-EIVLVDGVIVDDGQLACSTRKRRSD--------WSAYLDLEEDRSQSGRG 180
              EQ Q+  + +L  G   ++ +        +S+        WS Y D      Q+  G
Sbjct: 65  --GEQHQLNTQQLLAQGDEENENEDVYEVLDPKSEQEEAHVSRWSKYTD------QTTEG 124

Query: 181 NEPEIGSDFADVEIVTELPEVR 194
              E   +  D  + TE P+ R
Sbjct: 125 PNEEKDDEDEDENVYTERPQFR 135

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BLAST of MC04g1376 vs. NCBI nr
Match: XP_022133808.1 (uncharacterized protein LOC111006279 [Momordica charantia])

HSP 1 Score: 618 bits (1594), Expect = 4.40e-223
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MGHELRHGPKIPKYNQNLAPKLLIPPNRNTSTGSRNPDRNLQRASENRGSLLRSKQMSTI 60
           MGHELRHGPKIPKYNQNLAPKLLIPPNRNTSTGSRNPDRNLQRASENRGSLLRSKQMSTI
Sbjct: 1   MGHELRHGPKIPKYNQNLAPKLLIPPNRNTSTGSRNPDRNLQRASENRGSLLRSKQMSTI 60

Query: 61  FIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRK 120
           FIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRK
Sbjct: 61  FIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRK 120

Query: 121 YADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRSQSGRGNEPEIGSDF 180
           YADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRSQSGRGNEPEIGSDF
Sbjct: 121 YADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRSQSGRGNEPEIGSDF 180

Query: 181 ADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEIRNWES 240
           ADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEIRNWES
Sbjct: 181 ADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEIRNWES 240

Query: 241 PSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDNNGENMATEPSMDILKTMT 300
           PSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDNNGENMATEPSMDILKTMT
Sbjct: 241 PSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDNNGENMATEPSMDILKTMT 300

Query: 301 NDEMVEDDIHPDFK 314
           NDEMVEDDIHPDFK
Sbjct: 301 NDEMVEDDIHPDFK 314

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BLAST of MC04g1376 vs. NCBI nr
Match: XP_004141004.1 (MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical protein Csa_005258 [Cucumis sativus])

HSP 1 Score: 306 bits (784), Expect = 5.73e-100
Identity = 182/317 (57.41%), Postives = 209/317 (65.93%), Query Frame = 0


Query: 57  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 116
           M+TIFIAVQCFQCSTMQVKQQR+SGNKW CAVCN+KQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 117 MSRKYADEQKQVEEIVLVDGVIVDDGQLACS-TRKRRSDWSAYLDLEEDRSQSGRGNEPE 176
           MSRKYA+EQ  V+E  L+DG IVDD +L CS  RK RSDWS YLD  EDRS SGR NE E
Sbjct: 61  MSRKYANEQANVDE--LIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVE 120

Query: 177 IGSDFADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEI 236
           + SD    +IVTELP+++  KS     SSWSE+G  +G+  P FSKRK +A +LSSQDEI
Sbjct: 121 LESDL---KIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEI 180

Query: 237 RNWESPS----------------------------------------------------- 296
           RNWESPS                                                     
Sbjct: 181 RNWESPSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEA 240

Query: 297 -KWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDN----NGENMATEPSMDILK 314
            KW    S+D+E  RTK+CI+ K+RG +SSKWSEYITEE+N    N ENMA E  MD+LK
Sbjct: 241 SKW----SKDDENLRTKSCILGKVRG-ASSKWSEYITEEENCGGRNEENMAREEGMDVLK 300

[Close]

BLAST of MC04g1376 vs. NCBI nr
Match: XP_038885326.1 (MRN complex-interacting protein [Benincasa hispida])

HSP 1 Score: 304 bits (779), Expect = 4.00e-99
Identity = 179/317 (56.47%), Postives = 212/317 (66.88%), Query Frame = 0


Query: 57  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 116
           M+TIFIAVQCFQCSTMQVKQQR+SGN+W CAVCNEKQS+QKVFARA MAKDVRKFVQ+FN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNRWICAVCNEKQSLQKVFARASMAKDVRKFVQNFN 60

Query: 117 MSRKYADEQKQVEEIVLVDGVIVDDGQLACSTR-KRRSDWSAYLDLEEDRSQSGRGNEPE 176
           MSRKYADEQ + +E  L+DG IVD+ +L CS R KRR+DWS YLD EEDRS +GR NE E
Sbjct: 61  MSRKYADEQAKADE--LLDGGIVDEDKLDCSARRKRRNDWSEYLDPEEDRSHNGRENEGE 120

Query: 177 IGSDFADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEI 236
           + S+  D +IVTE+PEV+  KS  T  S WSE G  +G   P FSKRK +A +LSSQDE+
Sbjct: 121 LESESTDEKIVTEIPEVKTRKSGSTSCSRWSE-GEGDGFYRPIFSKRKHIANNLSSQDEV 180

Query: 237 RNWESPS-----KWKQS------------------------------------------- 296
           RNWES S     KW +                                            
Sbjct: 181 RNWESTSTIQTMKWSKGNDEQIISKAKNLSAPFQDKKMSKNSHKIADEIQNWELQSEIEA 240

Query: 297 ------ISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDN----NGENMATEPSMDILK 314
                 +S+D+E +RTK  I+AK+RGP SSKWSEYITEEDN    NGENMAT+  +DILK
Sbjct: 241 SKGSKDMSKDDENSRTKTSILAKVRGP-SSKWSEYITEEDNCRGRNGENMATDQCIDILK 300

[Close]

BLAST of MC04g1376 vs. NCBI nr
Match: XP_022939429.1 (MRN complex-interacting protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 302 bits (773), Expect = 9.45e-99
Identity = 182/289 (62.98%), Postives = 201/289 (69.55%), Query Frame = 0


Query: 57  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 116
           MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 117 MSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDWSAYLDLEEDRSQSGRGNEPE 176
           MSRKYADEQ +V+EI+  D  IVD+ QL  +  RKRRSDWS YLDLEEDRSQ+GR NE E
Sbjct: 61  MSRKYADEQTKVDEIL--DEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERE 120

Query: 177 IGSDFADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKD------- 236
           +GSDFAD + VTELPE +  K   T  SS  E         P F KR  +AK+       
Sbjct: 121 LGSDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKNSAIQASK 180

Query: 237 -------------------LSSQDEIRNWESPSKWKQSISEDEEKARTKACIMAKIRGPS 296
                              LSS+DEIRNWESPS      S+D+E A    CI+AK+ GP 
Sbjct: 181 WRKGVREDDEKVSLKAKHHLSSKDEIRNWESPS------SKDDESA----CILAKVGGP- 240

Query: 297 SSKWSEYITEEDN----NGENMATEPSMDILKTMTNDEMVEDDIHPDFK 314
           SSKWSEYITE+DN     GENM TE  MD LK +TNDE+VEDDIHPDFK
Sbjct: 241 SSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMITNDEIVEDDIHPDFK 276

[Close]

BLAST of MC04g1376 vs. NCBI nr
Match: XP_022939430.1 (MRN complex-interacting protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 300 bits (767), Expect = 2.98e-98
Identity = 173/263 (65.78%), Postives = 195/263 (74.14%), Query Frame = 0


Query: 57  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 116
           MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 117 MSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDWSAYLDLEEDRSQSGRGNEPE 176
           MSRKYADEQ +V+EI+  D  IVD+ QL  +  RKRRSDWS YLDLEEDRSQ+GR NE E
Sbjct: 61  MSRKYADEQTKVDEIL--DEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERE 120

Query: 177 IGSDFADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEI 236
           +GSDFAD + VTELPE +  K   T  SS  E         P F KR  +AK+ + Q   
Sbjct: 121 LGSDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKNSAIQ--- 180

Query: 237 RNWESPSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDN----NGENMATEP 296
                 SKW++ +S+D+E A    CI+AK+ GP SSKWSEYITE+DN     GENM TE 
Sbjct: 181 -----ASKWRKGVSKDDESA----CILAKVGGP-SSKWSEYITEDDNCGGRKGENMGTEQ 240

Query: 297 SMDILKTMTNDEMVEDDIHPDFK 314
            MD LK +TNDE+VEDDIHPDFK
Sbjct: 241 DMDTLKMITNDEIVEDDIHPDFK 248

[Close]

BLAST of MC04g1376 vs. ExPASy TrEMBL
Match: A0A6J1C0A7 (uncharacterized protein LOC111006279 OS=Momordica charantia OX=3673 GN=LOC111006279 PE=4 SV=1)

HSP 1 Score: 618 bits (1594), Expect = 2.13e-223
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MGHELRHGPKIPKYNQNLAPKLLIPPNRNTSTGSRNPDRNLQRASENRGSLLRSKQMSTI 60
           MGHELRHGPKIPKYNQNLAPKLLIPPNRNTSTGSRNPDRNLQRASENRGSLLRSKQMSTI
Sbjct: 1   MGHELRHGPKIPKYNQNLAPKLLIPPNRNTSTGSRNPDRNLQRASENRGSLLRSKQMSTI 60

Query: 61  FIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRK 120
           FIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRK
Sbjct: 61  FIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRK 120

Query: 121 YADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRSQSGRGNEPEIGSDF 180
           YADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRSQSGRGNEPEIGSDF
Sbjct: 121 YADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRSQSGRGNEPEIGSDF 180

Query: 181 ADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEIRNWES 240
           ADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEIRNWES
Sbjct: 181 ADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEIRNWES 240

Query: 241 PSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDNNGENMATEPSMDILKTMT 300
           PSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDNNGENMATEPSMDILKTMT
Sbjct: 241 PSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDNNGENMATEPSMDILKTMT 300

Query: 301 NDEMVEDDIHPDFK 314
           NDEMVEDDIHPDFK
Sbjct: 301 NDEMVEDDIHPDFK 314

[Close]

BLAST of MC04g1376 vs. ExPASy TrEMBL
Match: A0A0A0KCJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1)

HSP 1 Score: 306 bits (784), Expect = 2.77e-100
Identity = 182/317 (57.41%), Postives = 209/317 (65.93%), Query Frame = 0


Query: 57  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 116
           M+TIFIAVQCFQCSTMQVKQQR+SGNKW CAVCN+KQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 117 MSRKYADEQKQVEEIVLVDGVIVDDGQLACS-TRKRRSDWSAYLDLEEDRSQSGRGNEPE 176
           MSRKYA+EQ  V+E  L+DG IVDD +L CS  RK RSDWS YLD  EDRS SGR NE E
Sbjct: 61  MSRKYANEQANVDE--LIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVE 120

Query: 177 IGSDFADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEI 236
           + SD    +IVTELP+++  KS     SSWSE+G  +G+  P FSKRK +A +LSSQDEI
Sbjct: 121 LESDL---KIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEI 180

Query: 237 RNWESPS----------------------------------------------------- 296
           RNWESPS                                                     
Sbjct: 181 RNWESPSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEA 240

Query: 297 -KWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDN----NGENMATEPSMDILK 314
            KW    S+D+E  RTK+CI+ K+RG +SSKWSEYITEE+N    N ENMA E  MD+LK
Sbjct: 241 SKW----SKDDENLRTKSCILGKVRG-ASSKWSEYITEEENCGGRNEENMAREEGMDVLK 300

[Close]

BLAST of MC04g1376 vs. ExPASy TrEMBL
Match: A0A6J1FH51 (MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445345 PE=4 SV=1)

HSP 1 Score: 302 bits (773), Expect = 4.58e-99
Identity = 182/289 (62.98%), Postives = 201/289 (69.55%), Query Frame = 0


Query: 57  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 116
           MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 117 MSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDWSAYLDLEEDRSQSGRGNEPE 176
           MSRKYADEQ +V+EI+  D  IVD+ QL  +  RKRRSDWS YLDLEEDRSQ+GR NE E
Sbjct: 61  MSRKYADEQTKVDEIL--DEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERE 120

Query: 177 IGSDFADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKD------- 236
           +GSDFAD + VTELPE +  K   T  SS  E         P F KR  +AK+       
Sbjct: 121 LGSDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKNSAIQASK 180

Query: 237 -------------------LSSQDEIRNWESPSKWKQSISEDEEKARTKACIMAKIRGPS 296
                              LSS+DEIRNWESPS      S+D+E A    CI+AK+ GP 
Sbjct: 181 WRKGVREDDEKVSLKAKHHLSSKDEIRNWESPS------SKDDESA----CILAKVGGP- 240

Query: 297 SSKWSEYITEEDN----NGENMATEPSMDILKTMTNDEMVEDDIHPDFK 314
           SSKWSEYITE+DN     GENM TE  MD LK +TNDE+VEDDIHPDFK
Sbjct: 241 SSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMITNDEIVEDDIHPDFK 276

[Close]

BLAST of MC04g1376 vs. ExPASy TrEMBL
Match: A0A6J1FMP0 (MRN complex-interacting protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445345 PE=4 SV=1)

HSP 1 Score: 300 bits (767), Expect = 1.44e-98
Identity = 173/263 (65.78%), Postives = 195/263 (74.14%), Query Frame = 0


Query: 57  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 116
           MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 117 MSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDWSAYLDLEEDRSQSGRGNEPE 176
           MSRKYADEQ +V+EI+  D  IVD+ QL  +  RKRRSDWS YLDLEEDRSQ+GR NE E
Sbjct: 61  MSRKYADEQTKVDEIL--DEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERE 120

Query: 177 IGSDFADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEI 236
           +GSDFAD + VTELPE +  K   T  SS  E         P F KR  +AK+ + Q   
Sbjct: 121 LGSDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKNSAIQ--- 180

Query: 237 RNWESPSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDN----NGENMATEP 296
                 SKW++ +S+D+E A    CI+AK+ GP SSKWSEYITE+DN     GENM TE 
Sbjct: 181 -----ASKWRKGVSKDDESA----CILAKVGGP-SSKWSEYITEDDNCGGRKGENMGTEQ 240

Query: 297 SMDILKTMTNDEMVEDDIHPDFK 314
            MD LK +TNDE+VEDDIHPDFK
Sbjct: 241 DMDTLKMITNDEIVEDDIHPDFK 248

[Close]

BLAST of MC04g1376 vs. ExPASy TrEMBL
Match: A0A5D3BXL1 (UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00830 PE=4 SV=1)

HSP 1 Score: 298 bits (762), Expect = 5.58e-97
Identity = 182/317 (57.41%), Postives = 210/317 (66.25%), Query Frame = 0


Query: 57  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 116
           M+TIFIAVQCFQCSTMQVKQQR+SGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 117 MSRKYADEQKQVEEIVLVDGVIVDDGQLACS-TRKRRSDWSAYLDLEEDRSQSGRGNEPE 176
           MSRKYA+EQ  V++  L+ G IVDD +L CS  RKRR+DWS YLD EEDRS SGR NE E
Sbjct: 61  MSRKYANEQANVDD--LIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGE 120

Query: 177 IGSDFADVEIVTELPEVRASKSKLTCRSSWSEDGSRNGVLEPNFSKRKLMAKDLSSQDEI 236
           + SD    +I TELP+++  KS     SSWSE G  +G+  P FSKRK +AK+LSSQDEI
Sbjct: 121 LESDL---KIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEI 180

Query: 237 RNWESPS----------------------------------------------------- 296
           +NWESPS                                                     
Sbjct: 181 QNWESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEA 240

Query: 297 -KWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDN----NGENMATEPSMDILK 314
            KW    ++D+E +RTK+CI+ K+RG +SSKWSEYITEE+N    N ENMA E  MDILK
Sbjct: 241 SKW----TKDDENSRTKSCILGKVRG-ASSKWSEYITEEENCGGRNEENMAREQGMDILK 300

[Close]

BLAST of MC04g1376 vs. TAIR 10
Match: AT1G71760.1 (unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 9.8e-34
Identity = 95/280 (33.93%), Postives = 145/280 (51.79%), Query Frame = 0


Query: 58  STIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNM 117
           ST+FIA+QC++CSTMQVKQ+++S NKW C +CN+KQSV+KVFA+   AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 118 SRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRSQSGRGNEPEIG 177
           SRK ADE+         +  +  +     +  K+RSDWS YLD +    +     E +  
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFDSVNDRRRLAGEED-- 122

Query: 178 SDFADVEIVTELPEVRASKSKLTCRS--------SWSEDGSRNGVLEPNFSKRKLMAKDL 237
               DV+IVTE+P     + KL   S        +  E+   N + +P+FS+R +   D 
Sbjct: 123 ----DVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRRSIKKPDF 182

Query: 238 SSQDEIRNWESPSKWKQSISEDEEKARTKACIMAKIRGPSSSKWSEYITEEDNNGENMAT 297
            S + +              +D E+   ++  + K     +SKW  Y+   D+ GE+ A 
Sbjct: 183 RSDEVVTR-----------KKDMEERNLESERVTK----PASKWDAYLI--DDEGEHQA- 242

Query: 298 EPSMDILKTMTNDE----------------MVEDDIHPDF 314
            P   + K + +DE                +V+D++HPDF
Sbjct: 243 PPRFGVKKALKDDEVGGWDRAVMEINTEYQIVDDEVHPDF 258

[Close]

BLAST of MC04g1376 vs. TAIR 10
Match: AT1G71760.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-32
Identity = 97/284 (34.15%), Postives = 145/284 (51.06%), Query Frame = 0


Query: 58  STIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNM 117
           ST+FIA+QC++CSTMQVKQ+++S NKW C +CN+KQSV+KVFA+   AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 118 SRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRSQSGRGNEPEIG 177
           SRK ADE+         +  +  +     +  K+RSDWS YLD +    +     E +  
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFDSVNDRRRLAGEED-- 122

Query: 178 SDFADVEIVTELPEVRASKSKLTCRS--------SWSEDGSRNGVLEPNFSKRKLMAKDL 237
               DV+IVTE+P     + KL   S        +  E+   N + +P+FS+R +   D 
Sbjct: 123 ----DVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRRSIKKPDF 182

Query: 238 SSQDEIRNWESPSKWKQSISEDEEKARTKACIMAKIRG----PSSSKWSEYITEEDNNGE 297
            S    R+  +      + S +E   R K      +        +SKW  Y+   D+ GE
Sbjct: 183 RSGK--RSSATYVGHISAFSSNEVVTRKKDMEERNLESERVTKPASKWDAYLI--DDEGE 242

Query: 298 NMATEPSMDILKTMTNDE----------------MVEDDIHPDF 314
           + A  P   + K + +DE                +V+D++HPDF
Sbjct: 243 HQA-PPRFGVKKALKDDEVGGWDRAVMEINTEYQIVDDEVHPDF 275

The following BLAST results are available for this feature:

BLAST of MC04g1376 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32PP1	9.9e-07	32.39	MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1	[more]

BLAST of MC04g1376 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133808.1	4.40e-223	100.00	uncharacterized protein LOC111006279 [Momordica charantia]	[more]
XP_004141004.1	5.73e-100	57.41	MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical prote...	[more]
XP_038885326.1	4.00e-99	56.47	MRN complex-interacting protein [Benincasa hispida]	[more]
XP_022939429.1	9.45e-99	62.98	MRN complex-interacting protein isoform X1 [Cucurbita moschata]	[more]
XP_022939430.1	2.98e-98	65.78	MRN complex-interacting protein isoform X2 [Cucurbita moschata]	[more]

BLAST of MC04g1376 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0A7	2.13e-223	100.00	uncharacterized protein LOC111006279 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0KCJ3	2.77e-100	57.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1	[more]
A0A6J1FH51	4.58e-99	62.98	MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1FMP0	1.44e-98	65.78	MRN complex-interacting protein isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5D3BXL1	5.58e-97	57.41	UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of MC04g1376 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71760.1	9.8e-34	33.93	unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bac...	[more]
AT1G71760.2	1.1e-32	34.15	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032739	MRN complex-interacting protein	PFAM	PF15749	MRNIP	coord: 64..127 e-value: 1.0E-13 score: 52.0
IPR032739	MRN complex-interacting protein	PANTHER	PTHR15863	MRN COMPLEX-INTERACTING PROTEIN	coord: 57..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1376.1	MC04g1376.1	mRNA