MC04g1373 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1373
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DEAD-box ATP-dependent RNA helicase 39-like
Location	MC04: 21760349 .. 21763479 (-)
RNA-Seq Expression	MC04g1373
Synteny	MC04g1373

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAATTTGATGAACTGAAAAACCAATCTTCGAGGCAAATCGGGAATTCGAACGTCCGACGCAAAGGTACCGCACAGCGACGCCATGGGAAGCAGAACAAAAGCTCTTCTCGAGCTCTCGCGCCGCGCAAAACTCCTATTATGTCCAACCAAACCTTCTACGCTCCCCAAGCCCTCATCCTCTACGACTACTTCTTTAATTTCTCGAATTTATTCCTCTTCCTTCTCCAGAACCTCCGCCGGTGACACCGCCGCCGAGAATGATCGACCGCCGCAGTCCGACAGGGACTCCATGCTTCTTGAAAAGTTCAGACTCAGAAAACTCAAAGGCTCGTCGAAAATCACGCAAGAATCATCGAGTTCTACCTCTGCTGAGAAGGTAATGACAGGTTTCAAGGAGTTGGGGCTTTGTAATGAAGTGGCTGAAGCTGTGGAAGAAATGGGATTCTTCGTTCCTTCTGAGTTACATTGTGTAGGGATTCCTGCTCTTTTGGAAGGAAAAAATGTAGTGTTGGGATCTCTTTCTGGACCCGAAAGGGCTTTGGCTTACTTATTGCCTTTCATTCAGGTATTTTTCCTTCATTCGTTTTAATATAACAATCCATCGGCACTTTCTTCAAAAGTGCATTTGATCTAGATTTCTGTCACTTATCTGACCATTTCTTGGATTAGAATTTACCTTTGGATTGATTTCTTAGAATTTTGATGTGGTTCTTCGTAAAATGGGTACCTAGAAGCAGCTTATCCTGATAGATTATGTTCATCTTTTAATATATCTACAAACATATTCGCTTGAATATTAATATATGAAATAGGGAAGAAACAACATTGGAAGAGTTGAACTTAGGACCTAGGGTGATGGCATGTTGAATCTTCACTAAACCCATAAGCTTTAAGTTGATTAGTTATGATAATTGTTATCTTTTAATTTGTTATCAGCGATTCAGCATCATACATTCATTATTTTCATTCCCTGTTCTTGAGTTGTGAAATTGGCTAGAGTTGCTGTTCCCTCTCCACGCCTTTTATCTGTTCTACTTTTGGAACATTTTGATTTTCCCTCTATATTTGAAGAAACTAAGATACTAAATTGCTTGTTCACTATCATGATATATTGGTTTTAATCGTTATGTCTGCAATTGGCTCTTTTTAGAGTCTAAAAAGGGATGGAAAAAAGAATGATATAAGGTCCAAGCATCCTCGAGCCTTCATTCTGTGCTCAACGGCGGAGCTATCTGATGAGGTATCATTTTTCAATGTGAGTAAGATGTTAAGGGCAACTACAATTTGTTTGACATAGGATGCATTCTGCAGGTATTTCAGATGGCAAAGTTCATCAGTGGTTACGGGCAGTTGAAATCTTCAAGGGACAACAATTGTGCTCAATTAGAACTTCAGGAAGGAGGATCAGATGTTTCGATCGGTATGTTAGTTGGCACCCCTGATGAGGTCTCTGAACTCATCGAAGAGGGGAGTGTAGTTCCAGACGAAATCAAATACTTGGTATGTAGTCTACCAGCCACACCAAATCCTCTTTAAGAAGAATTTCTGAGTTAATAATCTTATGAACCTGTCAAGGTTGTGATCTTTTATAAATTTCCTCGTGTAACAGGTACTGGATGAGTTGGACACAATGTTCGATCTTGGATTTGGCCCCAACATTAAGAAGATTTTAACTTCATTAAATCATTATACGTCAAGACACTGCAATCAAAAGTGTCAATCTGTTGTGGTTACTTCAACAATGATAAAGGTTATTTCGTCAACTCCACCTCATTACACACTATAGAACTTTTGTGTGACTACACTATAGGTAGAACGGTTTGTGGAACGTTTCTCTGAGTTAATTATTTGTCTTATAAATTATAGATGCTACACGAACAACATTCATCTCTTGTGGAGTCTCTCAAGCGTGATGATGCAGGAGAGATTGCTGCTATGCTTCTAGAAATCGATGAAGATGAGGCATTCCATCTTATGGAATCTCCAGATACTATGAAATGTAAACTTGCTGATGCAGTCAAGTCGCTTCATGCATCCACAAAAGGAACTTAAAATTCATCATCAAATTATTTCACTCTTACTGAACTTTCAAGTGTTGTTATCATGTCTATGTTTACAGTCGTTGGTTAGACGTTGGTTTGTGAATATCGATCAGTTCTCGTAAGATAATGTCAAATGTGCTGCCATTGCCGTGTTTTTTGGTGATTCAATTATCATTTCTTTTCAAGGAGGGCGAGAGCGCCTCCGTAAAATACTGCAGGAGTTTGAAAGATACAAAGACTGCATGAGTGCATACAATTGTGAATTTGTGAGCTCTTAGGTAAGTGTTTCTTTTTTGACAACCACGTAAGATTCCTAAGGAAGAGAACAGAAAAACAAAAGAAAAGATAGATTTTGAGGTCCATATCTTATCATCATTTGACTTTTTCGTCTTGCAATTTGCGATATGTCTCTTCACTTCCAGGTGAGTAACGGATAGGGAGTTTTGGCAGGGGTTACAGCATTTCCATCAGCGTCGTATAATATGACGCCCGAGAAGTCTGGCAGCTGACACTTCCCACCCATGAGTATGTTCTTCTGCCATACAGCAGCTTGTTGCTCTCTGCTGAAGAACATTTCATCATTGCCATTCTCCAGCTCGGTGGCATTCGCTCGGTGCGTAGTCACAACCGTTGCTTCCTGGTTCAGCTCTATTACAGGGTCCTCAAACTCAAAGCCGTAATCCAAGCAAGCATTCCAGCGACGGCGCCATTTCCGGGCGTGGGAAGCACACATGAACAATGCAAAAGCACAGAAGAGAAGGCTCACACCAGCCATGCCAATCTGAGCTGTGCCTTGTGGAGGATGCAGTATTTGCAGTTGCCTTGCCATTTTGGGAAAATCTGAATGTTTGTTTTCTCTGAAGACTTTGTTTTGAAGGCTGCTTCTATTTATACAAGAAGTTTGGTTAGTGGGGCTGTTGGTTTTGGAGGTTTTGTTGACCTTTCTTTCCTCTTTTTTTTTTTCTTTTACCCTTAAGCAGGAGGTTTTGTTGACCTGATTTGTGGTTTTGGTGATCATTTTCCACTTCTGCTTTTGATTTTTTTTTTCTTTTAAGAACATTGAATAAAGGATCATCAAACTTTGGG

mRNA sequence

AAACAATTTGATGAACTGAAAAACCAATCTTCGAGGCAAATCGGGAATTCGAACGTCCGACGCAAAGGTACCGCACAGCGACGCCATGGGAAGCAGAACAAAAGCTCTTCTCGAGCTCTCGCGCCGCGCAAAACTCCTATTATGTCCAACCAAACCTTCTACGCTCCCCAAGCCCTCATCCTCTACGACTACTTCTTTAATTTCTCGAATTTATTCCTCTTCCTTCTCCAGAACCTCCGCCGGTGACACCGCCGCCGAGAATGATCGACCGCCGCAGTCCGACAGGGACTCCATGCTTCTTGAAAAGTTCAGACTCAGAAAACTCAAAGGCTCGTCGAAAATCACGCAAGAATCATCGAGTTCTACCTCTGCTGAGAAGGTAATGACAGGTTTCAAGGAGTTGGGGCTTTGTAATGAAGTGGCTGAAGCTGTGGAAGAAATGGGATTCTTCGTTCCTTCTGAGTTACATTGTGTAGGGATTCCTGCTCTTTTGGAAGGAAAAAATGTAGTGTTGGGATCTCTTTCTGGACCCGAAAGGGCTTTGGCTTACTTATTGCCTTTCATTCAGAGTCTAAAAAGGGATGGAAAAAAGAATGATATAAGGTCCAAGCATCCTCGAGCCTTCATTCTGTGCTCAACGGCGGAGCTATCTGATGAGGTATTTCAGATGGCAAAGTTCATCAGTGGTTACGGGCAGTTGAAATCTTCAAGGGACAACAATTGTGCTCAATTAGAACTTCAGGAAGGAGGATCAGATGTTTCGATCGGTATGTTAGTTGGCACCCCTGATGAGGTCTCTGAACTCATCGAAGAGGGGAGTGTAGTTCCAGACGAAATCAAATACTTGGTACTGGATGAGTTGGACACAATGTTCGATCTTGGATTTGGCCCCAACATTAAGAAGATTTTAACTTCATTAAATCATTATACGTCAAGACACTGCAATCAAAAGTGTCAATCTGTTGTGGTTACTTCAACAATGATAAAGATGCTACACGAACAACATTCATCTCTTGTGGAGTCTCTCAAGCGTGATGATGCAGGAGAGATTGCTGCTATGCTTCTAGAAATCGATGAAGATGAGGCATTCCATCTTATGGAATCTCCAGATACTATGAAATGTAAACTTGCTGATGCAGTCAAGTCGCTTCATGCATCCACAAAAGGAACTTAAAATTCATCATCAAATTATTTCACTCTTACTGAACTTTCAAGTGTTGTTATCATGTCTATGTTTACAGTCGTTGGTTAGACGTTGGTTTGTGAATATCGATCAGTTCTCGTAAGATAATGTCAAATGTGCTGCCATTGCCGTGTTTTTTGGTGATTCAATTATCATTTCTTTTCAAGGAGGGCGAGAGCGCCTCCGTAAAATACTGCAGGAGTTTGAAAGATACAAAGACTGCATGAGTGCATACAATTGTGAATTTGTGAGCTCTTAGGTGAGTAACGGATAGGGAGTTTTGGCAGGGGTTACAGCATTTCCATCAGCGTCGTATAATATGACGCCCGAGAAGTCTGGCAGCTGACACTTCCCACCCATGAGTATGTTCTTCTGCCATACAGCAGCTTGTTGCTCTCTGCTGAAGAACATTTCATCATTGCCATTCTCCAGCTCGGTGGCATTCGCTCGGTGCGTAGTCACAACCGTTGCTTCCTGGTTCAGCTCTATTACAGGGTCCTCAAACTCAAAGCCGTAATCCAAGCAAGCATTCCAGCGACGGCGCCATTTCCGGGCGTGGGAAGCACACATGAACAATGCAAAAGCACAGAAGAGAAGGCTCACACCAGCCATGCCAATCTGAGCTGTGCCTTGTGGAGGATGCAGTATTTGCAGTTGCCTTGCCATTTTGGGAAAATCTGAATGTTTGTTTTCTCTGAAGACTTTGTTTTGAAGGCTGCTTCTATTTATACAAGAAGTTTGGTTAGTGGGGCTGTTGGTTTTGGAGGTTTTGTTGACCTTTCTTTCCTCTTTTTTTTTTTCTTTTACCCTTAAGCAGGAGGTTTTGTTGACCTGATTTGTGGTTTTGGTGATCATTTTCCACTTCTGCTTTTGATTTTTTTTTTCTTTTAAGAACATTGAATAAAGGATCATCAAACTTTGGG

Coding sequence (CDS)

ATGGGAAGCAGAACAAAAGCTCTTCTCGAGCTCTCGCGCCGCGCAAAACTCCTATTATGTCCAACCAAACCTTCTACGCTCCCCAAGCCCTCATCCTCTACGACTACTTCTTTAATTTCTCGAATTTATTCCTCTTCCTTCTCCAGAACCTCCGCCGGTGACACCGCCGCCGAGAATGATCGACCGCCGCAGTCCGACAGGGACTCCATGCTTCTTGAAAAGTTCAGACTCAGAAAACTCAAAGGCTCGTCGAAAATCACGCAAGAATCATCGAGTTCTACCTCTGCTGAGAAGGTAATGACAGGTTTCAAGGAGTTGGGGCTTTGTAATGAAGTGGCTGAAGCTGTGGAAGAAATGGGATTCTTCGTTCCTTCTGAGTTACATTGTGTAGGGATTCCTGCTCTTTTGGAAGGAAAAAATGTAGTGTTGGGATCTCTTTCTGGACCCGAAAGGGCTTTGGCTTACTTATTGCCTTTCATTCAGAGTCTAAAAAGGGATGGAAAAAAGAATGATATAAGGTCCAAGCATCCTCGAGCCTTCATTCTGTGCTCAACGGCGGAGCTATCTGATGAGGTATTTCAGATGGCAAAGTTCATCAGTGGTTACGGGCAGTTGAAATCTTCAAGGGACAACAATTGTGCTCAATTAGAACTTCAGGAAGGAGGATCAGATGTTTCGATCGGTATGTTAGTTGGCACCCCTGATGAGGTCTCTGAACTCATCGAAGAGGGGAGTGTAGTTCCAGACGAAATCAAATACTTGGTACTGGATGAGTTGGACACAATGTTCGATCTTGGATTTGGCCCCAACATTAAGAAGATTTTAACTTCATTAAATCATTATACGTCAAGACACTGCAATCAAAAGTGTCAATCTGTTGTGGTTACTTCAACAATGATAAAGATGCTACACGAACAACATTCATCTCTTGTGGAGTCTCTCAAGCGTGATGATGCAGGAGAGATTGCTGCTATGCTTCTAGAAATCGATGAAGATGAGGCATTCCATCTTATGGAATCTCCAGATACTATGAAATGTAAACTTGCTGATGCAGTCAAGTCGCTTCATGCATCCACAAAAGGAACTTAA

Protein sequence

MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAENDRPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMIKMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTKGT

Homology

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BLAST of MC04g1373 vs. ExPASy Swiss-Prot
Match: Q56X76 (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 3.9e-47
Identity = 113/288 (39.24%), Postives = 177/288 (61.46%), Query Frame = 0


Query: 46  SFSRTSAGDTAAENDRPPQSDRDSMLLEKFRLRKLKGSSK-----------ITQESSSST 105
           S + T++  T   N   P   + ++LLE+ RLR LK S+K           + +ESS   
Sbjct: 46  SAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPSSVVGVEEESSIRK 105

Query: 106 SAEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALA 165
            ++K++  F+ELGL  EV  A++E+   VP+E+ C+GIPA++E K+VVLGS +G  + LA
Sbjct: 106 KSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLA 165

Query: 166 YLLPFIQSLKRD----GKKNDIRSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRD 225
           YLLP +Q ++ D    GKK   + + PR  +LC T ELS++V+++AK IS + + +S   
Sbjct: 166 YLLPIVQLMREDEANLGKKT--KPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILV 225

Query: 226 NNCAQLELQEGGSDVSIGMLVGTPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPN 285
           +  +++  QE   + +I M+VGTP  + + IEEG++V  +I YLVLDE DTMFD GFGP 
Sbjct: 226 SGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPE 285

Query: 286 IKKILTSLNHYTSRHCNQKCQSVVVTSTM---IKMLHEQHSSLVESLK 316
           I+K L  LN    +  +Q  Q+V+VT+TM   ++ L ++    +E L+
Sbjct: 286 IRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLR 331

[Close]

BLAST of MC04g1373 vs. ExPASy Swiss-Prot
Match: Q5VRY0 (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.6e-43
Identity = 110/304 (36.18%), Postives = 177/304 (58.22%), Query Frame = 0


Query: 27  LPKPSSSTTTSLI-SRIYSSSFSRTSAGDTAAENDRPPQS------DRDSMLLEKFRLRK 86
           L +PS      L+ + + +++ + T+AG +A      P++       R  +LLE+ R R 
Sbjct: 13  LTRPSPLLRLRLLRAALATTTTTTTAAGASAVTAPTEPETTAREAPSRHELLLERLRQRH 72

Query: 87  LKGSSKITQESSSSTSAE----------------KVMTGFKELGLCNEVAEAVEEMGFFV 146
           LKG    T   +                      +V+  F+ELGL  EV  A+ EMG   
Sbjct: 73  LKGVPAATPRPAQREKGRGGGGGGAQELQQKRRVEVVDSFEELGLGEEVMAALGEMGISK 132

Query: 147 PSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKK--NDIRSKHPRAFI 206
           P+E+ CVG+PA+L G +VVLGS +G  + LAYLLP +Q L+RD       ++ + PRA +
Sbjct: 133 PTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEAMLGMSMKPRRPRAVV 192

Query: 207 LCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSELI 266
           LC T EL+++VF++AK IS + + +S+  +  +++  QE   ++ + M+VGTP  + + I
Sbjct: 193 LCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGTPGRILDHI 252

Query: 267 EEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMIK 306
           ++G++V  +IKYLVLDE DTMFD GFGP+I+K L  L +  ++  +Q  Q+V+VT+TM K
Sbjct: 253 KDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQGFQTVLVTATMTK 312

[Close]

BLAST of MC04g1373 vs. ExPASy Swiss-Prot
Match: Q0DVX2 (DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0108600 PE=2 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 7.2e-17
Identity = 52/164 (31.71%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 103 FKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQS 162
           FKE+G  +E+  A+   GF  PS +  +    +LEGK+ ++G  SG  + LAYL P +Q+
Sbjct: 242 FKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQN 301

Query: 163 LKRDGKKNDIRS--KHPRAFILCSTAELSDEVFQMAKFISGYG-QLKSSRDNNCAQLELQ 222
           L+++  +   RS  ++PR  +L  TAEL+ +V    + IS  G   +S       + + Q
Sbjct: 302 LRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKTQ 361

Query: 223 EGGSDVSIGMLVGTPDEVSELIEEGSVVPDEIKYLVLDELDTMF 264
               D  + +L+ TP     L++EG V  + ++ +VLDE+D ++
Sbjct: 362 LESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILY 405

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BLAST of MC04g1373 vs. ExPASy Swiss-Prot
Match: P25888 (ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12) OX=83333 GN=rhlE PE=1 SV=3)

HSP 1 Score: 86.3 bits (212), Expect = 7.9e-16
Identity = 70/231 (30.30%), Postives = 122/231 (52.81%), Query Frame = 0


Query: 103 FKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQS 162
           F  LGL  ++  AV E G+  P+ +    IPA+LEG++++  + +G  +   + LP +Q 
Sbjct: 3   FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62

Query: 163 LKRDGKKNDIRSKHP-RAFILCSTAELSDEVFQMAKFISGYGQLKS-----SRDNNCAQL 222
           L    ++   + + P RA IL  T EL+ ++ +  +  S Y  ++S         N   +
Sbjct: 63  LIT--RQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 122

Query: 223 ELQEGGSDVSIGMLVGTPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILT 282
           +L+ GG DV    LV TP  + +L  + +V  D+++ LVLDE D M D+GF  +I+++LT
Sbjct: 123 KLR-GGVDV----LVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLT 182

Query: 283 SLNHYTSRHCNQKCQSVVVTSTM---IKMLHEQ--HSSL-VESLKRDDAGE 322
            L          K Q+++ ++T    IK L E+  H+ L +E  +R+ A +
Sbjct: 183 KL--------PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD 218

[Close]

BLAST of MC04g1373 vs. ExPASy Swiss-Prot
Match: Q54KG1 (Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium discoideum OX=44689 GN=ddx41 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-14
Identity = 66/269 (24.54%), Postives = 126/269 (46.84%), Query Frame = 0


Query: 78  RKLKGSSKITQESSSSTSAEKV---MTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPA 137
           R  K   K+  + +  T  E +   +T FKE+ +   V + + E G   PS +   G+P 
Sbjct: 196 RDEKDHQKVRDQLNIITDGEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPV 255

Query: 138 LLEGKNVVLGSLSGPERALAYLLPFIQ-SLKRDGKKNDIRSKHPRAFILCSTAELSDEVF 197
           +L G++++  + +G  + L + LP +  +L+ + K   I+ + P   ILC + EL+ + +
Sbjct: 256 ILSGRDMIGIAYTGSGKTLVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELARQTY 315

Query: 198 QMAKFIS-------GYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSELIEEGSV 257
            +    +       G+ QL++        L  QE      + M++ TP  + +L+ +  +
Sbjct: 316 DLVNSFTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKI 375

Query: 258 VPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMIKMLHEQ 317
                KYL LDE D + DLGF  +I+ +L +         NQ+ Q+++ ++TM K + E 
Sbjct: 376 NFKLCKYLGLDEADRLIDLGFEDDIRSVLDNFT-------NQR-QTLLFSATMPKKIQEF 435

Query: 318 HSSLVESLKRDDAGEIAAMLLEIDEDEAF 336
             S +      + G   A  L + ++  F
Sbjct: 436 ARSALVLPVEVNVGRAGAANLNVTQEVEF 456

[Close]

BLAST of MC04g1373 vs. NCBI nr
Match: XP_022134432.1 (DEAD-box ATP-dependent RNA helicase 39-like [Momordica charantia])

HSP 1 Score: 695 bits (1794), Expect = 6.02e-252
Identity = 361/362 (99.72%), Postives = 361/362 (99.72%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSRTKALLELSRRAKLLLCPT PSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND
Sbjct: 1   MGSRTKALLELSRRAKLLLCPTNPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG 120
           RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG
Sbjct: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG 120

Query: 121 FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF 180
           FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF
Sbjct: 121 FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF 180

Query: 181 ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL 240
           ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL
Sbjct: 181 ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL 240

Query: 241 IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI 300
           IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI
Sbjct: 241 IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI 300

Query: 301 KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK 360
           KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK
Sbjct: 301 KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK 360

Query: 361 GT 362
           GT
Sbjct: 361 GT 362

[Close]

BLAST of MC04g1373 vs. NCBI nr
Match: XP_038886391.1 (DEAD-box ATP-dependent RNA helicase 39-like [Benincasa hispida])

HSP 1 Score: 530 bits (1364), Expect = 1.68e-186
Identity = 277/364 (76.10%), Postives = 312/364 (85.71%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSR KAL ELS  A  LLCPTK ST P  + S    L SR++SS+FSRTS   TA END
Sbjct: 1   MGSRRKALFELSHYANSLLCPTKRSTFPNLTLSRNAFLASRLHSSAFSRTSTDGTAMEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTS--AEKVMTGFKELGLCNEVAEAVEE 120
           +PPQS+RD+MLLEKFRLRKLKGSSK++QESSS++S   EKV+TGFKELGLCNE+AEAVEE
Sbjct: 61  QPPQSNRDAMLLEKFRLRKLKGSSKVSQESSSTSSNRGEKVITGFKELGLCNELAEAVEE 120

Query: 121 MGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPR 180
           MG F PSELHCVGIPALLEGKNVVLGSL GPERALAYLLP IQ+LKRDGKK  +RSKHPR
Sbjct: 121 MGIFAPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDGKKYGVRSKHPR 180

Query: 181 AFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVS 240
           AF+LCS+ ELSDEVFQMAKFIS Y QL ++RDN C +LELQ+  SD+SIG+L+GTP E+ 
Sbjct: 181 AFVLCSSVELSDEVFQMAKFISNYRQLATARDNGCIELELQKSASDISIGLLIGTPGEIL 240

Query: 241 ELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTST 300
           +LIEEGSVVPDEI YLVLDELD+MFDLGFGPNIK ILTS+     RHCN+KCQSVV+TST
Sbjct: 241 KLIEEGSVVPDEINYLVLDELDSMFDLGFGPNIKDILTSV-----RHCNEKCQSVVLTST 300

Query: 301 MIKMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHAS 360
            IKMLHEQHSSLVESLKR D GEIAAMLLEI+E+EAFHLMESPDT+KCKLAD V+SL AS
Sbjct: 301 FIKMLHEQHSSLVESLKRGDTGEIAAMLLEIEEEEAFHLMESPDTLKCKLADVVESLCAS 359

Query: 361 TKGT 362
           T+ T
Sbjct: 361 TQRT 359

[Close]

BLAST of MC04g1373 vs. NCBI nr
Match: XP_022959642.1 (DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita moschata])

HSP 1 Score: 524 bits (1350), Expect = 2.92e-184
Identity = 280/370 (75.68%), Postives = 306/370 (82.70%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSR KALLEL      L CPTK +    P +ST   L SR +SSSFSRT       END
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRYFSSSFSRT----LTTEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSA--------EKVMTGFKELGLCNEV 120
           RPP++DR++MLLEKFR RKLKGSS I++ES SS SA        EKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDI 180
           AEA E MGFFVPSELHCVGIPALLEGKNVVLGSL GPERALAYLLP IQ+LKRD K N +
Sbjct: 121 AEAAEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVG 240
           RSKHPRAF++CST ELSDEVFQMAKFIS Y QLK+++DN   QLELQ G SDVSIG+L+G
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQS 300
           TP+EVSELIE+GSVV DEIKYLVLDELDTMFDLGFGPNIKKILTS+   TSRHCNQKCQS
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTMIKMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAV 360
           VVVTST+IKMLHEQHSSLVESLKR D GEIAAMLLEI+E+EAFHLMESPDT+KCKLADAV
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 KSLHASTKGT 362
           +SL  ST  T
Sbjct: 361 ESLRVSTNRT 366

[Close]

BLAST of MC04g1373 vs. NCBI nr
Match: KAG6602207.1 (DEAD-box ATP-dependent RNA helicase 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 522 bits (1344), Expect = 2.39e-183
Identity = 280/370 (75.68%), Postives = 306/370 (82.70%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSR KALLEL      L CPTK +    P +ST   L SR +S  FSRT       END
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRHFSYPFSRT----FTTEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSA--------EKVMTGFKELGLCNEV 120
           RPP++DR++MLLEKFR RKLKGSS I++ES SS SA        EKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDI 180
           AEAVE MGFFVPSELHCVGIPALLEGKNVVLGSL GPERALAYLLP IQ+LKRD K N +
Sbjct: 121 AEAVEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVG 240
           RSKHPRAF++CST ELSDEVFQMAKFIS Y QLK+++DN   QLELQ G SDVSIG+L+G
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYRQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQS 300
           TP+EVSELIE+GSVV DEIKYLVLDELDTMFDLGFGPNIKKILTS+   TSRHCNQKCQS
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTMIKMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAV 360
           VVVTST+IKMLHEQHSSLVESLKR D GEIAAMLLEI+E+EAFHLMESPDT+KCKLADAV
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 KSLHASTKGT 362
           +SL AST  T
Sbjct: 361 ESLRASTNRT 366

[Close]

BLAST of MC04g1373 vs. NCBI nr
Match: XP_022990794.1 (DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita maxima])

HSP 1 Score: 517 bits (1332), Expect = 1.60e-181
Identity = 278/370 (75.14%), Postives = 306/370 (82.70%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSR KALLELS     L CPTK S+   P  S    L SR +SSSFSRTS      END
Sbjct: 1   MGSRRKALLELSHYLNSLSCPTKRSSFHNPVISLNAFLASRYFSSSFSRTSE----TEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSA--------EKVMTGFKELGLCNEV 120
           RPP++DR++MLLEKFR RKLKGSS I++ES SS SA        EKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDI 180
           AEA E MGFFVPSEL CVGIPALLEGKNVVLGSL GPERAL YLLP IQ+LKRD K N +
Sbjct: 121 AEAAEGMGFFVPSELLCVGIPALLEGKNVVLGSLYGPERALTYLLPLIQNLKRDAKSNGV 180

Query: 181 RSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVG 240
           RSKHPRAF++CST ELSDEVFQMAKFIS Y QLK+++DN   +LELQ G SDVSIG+L+G
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGKLELQNGASDVSIGLLIG 240

Query: 241 TPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQS 300
           TP+EVSELIE+GS+V DEIKYLVLDELDTMFDLGFGPNIKKILTS+   TSRHCNQKCQS
Sbjct: 241 TPNEVSELIEDGSMVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTMIKMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAV 360
           VVVTST+IKMLH+QHSSLVESLKR D GEIAAMLLEI+E+EAFHLMESPDT+KCKLADAV
Sbjct: 301 VVVTSTLIKMLHKQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 KSLHASTKGT 362
           +SL AST  T
Sbjct: 361 ESLRASTNRT 366

[Close]

BLAST of MC04g1373 vs. ExPASy TrEMBL
Match: A0A6J1BZL0 (DEAD-box ATP-dependent RNA helicase 39-like OS=Momordica charantia OX=3673 GN=LOC111006682 PE=4 SV=1)

HSP 1 Score: 695 bits (1794), Expect = 2.92e-252
Identity = 361/362 (99.72%), Postives = 361/362 (99.72%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSRTKALLELSRRAKLLLCPT PSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND
Sbjct: 1   MGSRTKALLELSRRAKLLLCPTNPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG 120
           RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG
Sbjct: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG 120

Query: 121 FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF 180
           FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF
Sbjct: 121 FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF 180

Query: 181 ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL 240
           ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL
Sbjct: 181 ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL 240

Query: 241 IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI 300
           IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI
Sbjct: 241 IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI 300

Query: 301 KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK 360
           KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK
Sbjct: 301 KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK 360

Query: 361 GT 362
           GT
Sbjct: 361 GT 362

[Close]

BLAST of MC04g1373 vs. ExPASy TrEMBL
Match: A0A6J1H541 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita moschata OX=3662 GN=LOC111460659 PE=4 SV=1)

HSP 1 Score: 524 bits (1350), Expect = 1.42e-184
Identity = 280/370 (75.68%), Postives = 306/370 (82.70%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSR KALLEL      L CPTK +    P +ST   L SR +SSSFSRT       END
Sbjct: 1   MGSRRKALLELYHYVNSLSCPTKGNVFHNPVNSTNAFLASRYFSSSFSRT----LTTEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSA--------EKVMTGFKELGLCNEV 120
           RPP++DR++MLLEKFR RKLKGSS I++ES SS SA        EKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDI 180
           AEA E MGFFVPSELHCVGIPALLEGKNVVLGSL GPERALAYLLP IQ+LKRD K N +
Sbjct: 121 AEAAEGMGFFVPSELHCVGIPALLEGKNVVLGSLYGPERALAYLLPLIQNLKRDAKTNGV 180

Query: 181 RSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVG 240
           RSKHPRAF++CST ELSDEVFQMAKFIS Y QLK+++DN   QLELQ G SDVSIG+L+G
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGQLELQNGASDVSIGLLIG 240

Query: 241 TPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQS 300
           TP+EVSELIE+GSVV DEIKYLVLDELDTMFDLGFGPNIKKILTS+   TSRHCNQKCQS
Sbjct: 241 TPNEVSELIEDGSVVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTMIKMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAV 360
           VVVTST+IKMLHEQHSSLVESLKR D GEIAAMLLEI+E+EAFHLMESPDT+KCKLADAV
Sbjct: 301 VVVTSTLIKMLHEQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 KSLHASTKGT 362
           +SL  ST  T
Sbjct: 361 ESLRVSTNRT 366

[Close]

BLAST of MC04g1373 vs. ExPASy TrEMBL
Match: A0A6J1JT03 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita maxima OX=3661 GN=LOC111487576 PE=4 SV=1)

HSP 1 Score: 517 bits (1332), Expect = 7.75e-182
Identity = 278/370 (75.14%), Postives = 306/370 (82.70%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSR KALLELS     L CPTK S+   P  S    L SR +SSSFSRTS      END
Sbjct: 1   MGSRRKALLELSHYLNSLSCPTKRSSFHNPVISLNAFLASRYFSSSFSRTSE----TEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSA--------EKVMTGFKELGLCNEV 120
           RPP++DR++MLLEKFR RKLKGSS I++ES SS SA        EKVMTGFKELGL NEV
Sbjct: 61  RPPRTDREAMLLEKFRNRKLKGSSNISRESLSSNSAVKGSGNGGEKVMTGFKELGLYNEV 120

Query: 121 AEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDI 180
           AEA E MGFFVPSEL CVGIPALLEGKNVVLGSL GPERAL YLLP IQ+LKRD K N +
Sbjct: 121 AEAAEGMGFFVPSELLCVGIPALLEGKNVVLGSLYGPERALTYLLPLIQNLKRDAKSNGV 180

Query: 181 RSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVG 240
           RSKHPRAF++CST ELSDEVFQMAKFIS Y QLK+++DN   +LELQ G SDVSIG+L+G
Sbjct: 181 RSKHPRAFVMCSTTELSDEVFQMAKFISNYKQLKTAKDNGFGKLELQNGASDVSIGLLIG 240

Query: 241 TPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQS 300
           TP+EVSELIE+GS+V DEIKYLVLDELDTMFDLGFGPNIKKILTS+   TSRHCNQKCQS
Sbjct: 241 TPNEVSELIEDGSMVSDEIKYLVLDELDTMFDLGFGPNIKKILTSVKQSTSRHCNQKCQS 300

Query: 301 VVVTSTMIKMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAV 360
           VVVTST+IKMLH+QHSSLVESLKR D GEIAAMLLEI+E+EAFHLMESPDT+KCKLADAV
Sbjct: 301 VVVTSTLIKMLHKQHSSLVESLKRSDGGEIAAMLLEIEEEEAFHLMESPDTLKCKLADAV 360

Query: 361 KSLHASTKGT 362
           +SL AST  T
Sbjct: 361 ESLRASTNRT 366

[Close]

BLAST of MC04g1373 vs. ExPASy TrEMBL
Match: A0A5A7SLY8 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G003970 PE=4 SV=1)

HSP 1 Score: 480 bits (1236), Expect = 2.24e-167
Identity = 253/362 (69.89%), Postives = 295/362 (81.49%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSR KALLELS  A +LL PTK S  P  + S    L S   SS+FSR+SA  T  END
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG 120
           +PPQS+RDS LLEKFRLRKLKG SKI+Q SSSS   EKVMTGF++LGLCNE+A AVEEMG
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120

Query: 121 FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF 180
              PSEL C  IPA+LEGKNVVLG L+GPERALAYLLP IQ+LKRD K+   RSKHPRAF
Sbjct: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL 240
           ++C TA+LS+E+F MAK+IS Y QLK+ RDN+C +LELQ+  SDVSIG+L+GTPDE+SEL
Sbjct: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI 300
           IEEGSVV DEI YLV DELD+MFDLGFGPNIKKILTS+     RHCN+KC+S+VVTST+I
Sbjct: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RHCNEKCRSIVVTSTLI 300

Query: 301 KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK 360
           KM+HEQ SSLV+SL+  DAGEIAAM+LEI+E+EAFHLMESPD +K KLAD V+SL  ST+
Sbjct: 301 KMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQ 357

Query: 361 GT 362
            T
Sbjct: 361 ET 357

[Close]

BLAST of MC04g1373 vs. ExPASy TrEMBL
Match: A0A1S3C4L0 (DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo OX=3656 GN=LOC103496581 PE=4 SV=1)

HSP 1 Score: 480 bits (1236), Expect = 2.24e-167
Identity = 253/362 (69.89%), Postives = 295/362 (81.49%), Query Frame = 0


Query: 1   MGSRTKALLELSRRAKLLLCPTKPSTLPKPSSSTTTSLISRIYSSSFSRTSAGDTAAEND 60
           MGSR KALLELS  A +LL PTK S  P  + S    L S   SS+FSR+SA  T  END
Sbjct: 1   MGSRRKALLELSHCANILLSPTKRSIFPNFALSANALLASPFCSSTFSRSSADGTPVEND 60

Query: 61  RPPQSDRDSMLLEKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMG 120
           +PPQS+RDS LLEKFRLRKLKG SKI+Q SSSS   EKVMTGF++LGLCNE+A AVEEMG
Sbjct: 61  QPPQSNRDSTLLEKFRLRKLKGLSKISQHSSSSNGGEKVMTGFRQLGLCNELAGAVEEMG 120

Query: 121 FFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQSLKRDGKKNDIRSKHPRAF 180
              PSEL C  IPA+LEGKNVVLG L+GPERALAYLLP IQ+LKRD K+   RSKHPRAF
Sbjct: 121 ILAPSELDCAAIPAVLEGKNVVLGYLNGPERALAYLLPLIQNLKRDEKRYGTRSKHPRAF 180

Query: 181 ILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSEL 240
           ++C TA+LS+E+F MAK+IS Y QLK+ RDN+C +LELQ+  SDVSIG+L+GTPDE+SEL
Sbjct: 181 VMCPTAQLSEELFCMAKYISNYRQLKTPRDNSCGELELQKSASDVSIGLLIGTPDEISEL 240

Query: 241 IEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLNHYTSRHCNQKCQSVVVTSTMI 300
           IEEGSVV DEI YLV DELD+MFDLGFGPNIKKILTS+     RHCN+KC+S+VVTST+I
Sbjct: 241 IEEGSVVLDEINYLVFDELDSMFDLGFGPNIKKILTSV-----RHCNEKCRSIVVTSTLI 300

Query: 301 KMLHEQHSSLVESLKRDDAGEIAAMLLEIDEDEAFHLMESPDTMKCKLADAVKSLHASTK 360
           KM+HEQ SSLV+SL+  DAGEIAAM+LEI+E+EAFHLMESPD +K KLAD V+SL  ST+
Sbjct: 301 KMMHEQRSSLVKSLRCGDAGEIAAMVLEIEEEEAFHLMESPDALKSKLADVVESLRPSTQ 357

Query: 361 GT 362
            T
Sbjct: 361 ET 357

[Close]

BLAST of MC04g1373 vs. TAIR 10
Match: AT4G09730.1 (RH39 )

HSP 1 Score: 190.3 bits (482), Expect = 2.8e-48
Identity = 113/288 (39.24%), Postives = 177/288 (61.46%), Query Frame = 0


Query: 46  SFSRTSAGDTAAENDRPPQSDRDSMLLEKFRLRKLKGSSK-----------ITQESSSST 105
           S + T++  T   N   P   + ++LLE+ RLR LK S+K           + +ESS   
Sbjct: 46  SAAATTSSPTTETNVTDPDQLKHTILLERLRLRHLKESAKPPQQRPSSVVGVEEESSIRK 105

Query: 106 SAEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALA 165
            ++K++  F+ELGL  EV  A++E+   VP+E+ C+GIPA++E K+VVLGS +G  + LA
Sbjct: 106 KSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLA 165

Query: 166 YLLPFIQSLKRD----GKKNDIRSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRD 225
           YLLP +Q ++ D    GKK   + + PR  +LC T ELS++V+++AK IS + + +S   
Sbjct: 166 YLLPIVQLMREDEANLGKKT--KPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILV 225

Query: 226 NNCAQLELQEGGSDVSIGMLVGTPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPN 285
           +  +++  QE   + +I M+VGTP  + + IEEG++V  +I YLVLDE DTMFD GFGP 
Sbjct: 226 SGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPE 285

Query: 286 IKKILTSLNHYTSRHCNQKCQSVVVTSTM---IKMLHEQHSSLVESLK 316
           I+K L  LN    +  +Q  Q+V+VT+TM   ++ L ++    +E L+
Sbjct: 286 IRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLR 331

[Close]

BLAST of MC04g1373 vs. TAIR 10
Match: AT1G12770.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 5.3e-15
Identity = 53/212 (25.00%), Postives = 109/212 (51.42%), Query Frame = 0


Query: 73  EKFRLRKLKGSSKITQESSSSTSAEKVMTGFKELGLCNEVAEAVEEMGFFVPSELHCVGI 132
           +K ++ K K  ++I     S+ S       F+ELGL + + +++E  GF VP+++    +
Sbjct: 89  DKMKVVKEKKPAEIVSPLFSAKS-------FEELGLPDSLLDSLEREGFSVPTDVQSAAV 148

Query: 133 PALLEGKNVVLGSLSGPERALAYLLPFIQSL-------KRDGKKNDIRSKHPRAFILCST 192
           PA+++G + V+ S +G  + LAYLLP +  +       +    +ND R++  +A I+  +
Sbjct: 149 PAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLAEKSRSSHSENDKRTE-IQAMIVAPS 208

Query: 193 AELSDEVFQMAKFISG--YGQLKSSRDNNCAQLELQEGGSDVSIGMLVGTPDEVSELIEE 252
            EL  ++ +  + + G  + ++         ++  +E        ++VGTP  ++E+ + 
Sbjct: 209 RELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKG 268

Query: 253 GSVVPDEIKYLVLDELDTMFDLGFGPNIKKIL 276
           G +     ++LVLDE+D +    F  +I +IL
Sbjct: 269 GKLHTHGCRFLVLDEVDELLSFNFREDIHRIL 292

[Close]

BLAST of MC04g1373 vs. TAIR 10
Match: AT1G77030.1 (hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases )

HSP 1 Score: 79.3 bits (194), Expect = 6.9e-15
Identity = 51/183 (27.87%), Postives = 94/183 (51.37%), Query Frame = 0


Query: 102 GFKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQ 161
           GF+ L L   V  A+++ G+ VP+ +    +P +L G +VV  + +G  +  A+L+P ++
Sbjct: 29  GFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLE 88

Query: 162 SLKRDGKKNDIRSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSS----RDNNCAQLE 221
            LK+   +  +     RA IL  T +L+++  +  K +  +  L+ S     D+   Q E
Sbjct: 89  KLKQHVPQGGV-----RALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFE 148

Query: 222 LQEGGSDVSIGMLVGTPDEVSELIEE-GSVVPDEIKYLVLDELDTMFDLGFGPNIKKILT 280
               G DV    ++ TP  +  L+ E   +    ++Y+V DE D++F +GF   + +ILT
Sbjct: 149 ELTKGPDV----IIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILT 202

[Close]

BLAST of MC04g1373 vs. TAIR 10
Match: AT2G42520.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 9.0e-15
Identity = 49/180 (27.22%), Postives = 87/180 (48.33%), Query Frame = 0


Query: 103 FKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQS 162
           F E+ L   +   +    +  P+ +    IP LLEG++++  + +G  +  A+  P I  
Sbjct: 161 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISG 220

Query: 163 LKRD---GKKNDIRSKHPRAFILCSTAELSDEVFQMAKFISGYGQLKSSRDNNCAQLELQ 222
           + +D    +    R+ +P A IL  T EL+ ++   AK  S    +K         +  Q
Sbjct: 221 IMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQ 280

Query: 223 EGGSDVSIGMLVGTPDEVSELIEEGSVVPDEIKYLVLDELDTMFDLGFGPNIKKILTSLN 280
               +  + +LV TP  +++L+E   V    I++L LDE D M D+GF P I+KI+  ++
Sbjct: 281 LRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMD 340

[Close]

BLAST of MC04g1373 vs. TAIR 10
Match: AT3G06980.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 79.0 bits (193), Expect = 9.0e-15
Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 0


Query: 103 FKELGLCNEVAEAVEEMGFFVPSELHCVGIPALLEGKNVVLGSLSGPERALAYLLPFIQS 162
           F E+G   ++ +A++E  F  P+ +  +    +++GK+ ++   SG  + LAYL+P IQ 
Sbjct: 376 FAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQR 435

Query: 163 LKRDGKKNDIRSKH--PRAFILCSTAELSDEVFQMAKFISGYG-----QLKSSRDNNCAQ 222
           L+ +  +   +S    PR  +L  TAEL+ +V    + IS  G      + +       Q
Sbjct: 436 LREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQ 495

Query: 223 LELQEGGSDVSIGMLVGTPDEVSELIEEGSVVPDEIKYLVLDELDTMF 264
           LE  E G DV    L+ TP   + L+ EG +    ++  +LDE+D +F
Sbjct: 496 LENLEQGVDV----LIATPGRFTYLMNEGILGLSNLRCAILDEVDILF 539

The following BLAST results are available for this feature:

BLAST of MC04g1373 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56X76	3.9e-47	39.24	DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 P...	[more]
Q5VRY0	2.6e-43	36.18	DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q0DVX2	7.2e-17	31.71	DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
P25888	7.9e-16	30.30	ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12) OX=83333 GN=rhl...	[more]
Q54KG1	1.1e-14	24.54	Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of MC04g1373 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134432.1	6.02e-252	99.72	DEAD-box ATP-dependent RNA helicase 39-like [Momordica charantia]	[more]
XP_038886391.1	1.68e-186	76.10	DEAD-box ATP-dependent RNA helicase 39-like [Benincasa hispida]	[more]
XP_022959642.1	2.92e-184	75.68	DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita moschata]	[more]
KAG6602207.1	2.39e-183	75.68	DEAD-box ATP-dependent RNA helicase 39, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022990794.1	1.60e-181	75.14	DEAD-box ATP-dependent RNA helicase 39-like [Cucurbita maxima]	[more]

BLAST of MC04g1373 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZL0	2.92e-252	99.72	DEAD-box ATP-dependent RNA helicase 39-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1H541	1.42e-184	75.68	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JT03	7.75e-182	75.14	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5A7SLY8	2.24e-167	69.89	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C4L0	2.24e-167	69.89	DEAD-box ATP-dependent RNA helicase 39-like OS=Cucumis melo OX=3656 GN=LOC103496...	[more]

BLAST of MC04g1373 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09730.1	2.8e-48	39.24	RH39	[more]
AT1G12770.1	5.3e-15	25.00	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G77030.1	6.9e-15	27.87	hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-d...	[more]
AT2G42520.1	9.0e-15	27.22	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G06980.1	9.0e-15	29.17	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 120..332 e-value: 0.0012 score: 27.8
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 132..317 score: 15.972834
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	SMART	SM00517	poly_2	coord: 295..358 e-value: 6.7E-4 score: 17.8
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 132..301 e-value: 1.4E-18 score: 67.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 65..315 e-value: 6.9E-35 score: 122.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 96..303
None	No IPR available	PANTHER	PTHR24031:SF694	DEAD-BOX ATP-DEPENDENT RNA HELICASE 39-LIKE ISOFORM X1	coord: 70..358
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 70..358
None	No IPR available	CDD	cd00268	DEADc	coord: 112..299 e-value: 1.1196E-36 score: 129.484
IPR036053	PABC (PABP) domain	SUPERFAMILY	63570	PABC (PABP) domain	coord: 301..356

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1373.1	MC04g1373.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902775	mitochondrial large ribosomal subunit assembly
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding