MC04g1370 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g1370
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 21750892 .. 21751140 (-)
RNA-Seq ExpressionMC04g1370
SyntenyMC04g1370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCCGAATGTAGACGGTATAGCCCCAGAAAGGGCGGTAGCCGCTGCTCCAAACGTCGTGAGATTAGTAAGCAGTCCTATTTCTGGCGGAATCTCTCCGGAAAGATATGGATTCCCTCCGATCCGGAACTCTTGGAGGGACACCAAAGAACCAAATTGTGATGGAATGGAGCCGTTAAACAGATTGTCCTGGAGGCAAAGACTTTGCAGAGAAGTCAGATTAGCAAGCTGCGGAGGAATCTTACCAGAC

mRNA sequence

TTCCCGAATGTAGACGGTATAGCCCCAGAAAGGGCGGTAGCCGCTGCTCCAAACGTCGTGAGATTAGTAAGCAGTCCTATTTCTGGCGGAATCTCTCCGGAAAGATATGGATTCCCTCCGATCCGGAACTCTTGGAGGGACACCAAAGAACCAAATTGTGATGGAATGGAGCCGTTAAACAGATTGTCCTGGAGGCAAAGACTTTGCAGAGAAGTCAGATTAGCAAGCTGCGGAGGAATCTTACCAGAC

Coding sequence (CDS)

TTCCCGAATGTAGACGGTATAGCCCCAGAAAGGGCGGTAGCCGCTGCTCCAAACGTCGTGAGATTAGTAAGCAGTCCTATTTCTGGCGGAATCTCTCCGGAAAGATATGGATTCCCTCCGATCCGGAACTCTTGGAGGGACACCAAAGAACCAAATTGTGATGGAATGGAGCCGTTAAACAGATTGTCCTGGAGGCAAAGACTTTGCAGAGAAGTCAGATTAGCAAGCTGCGGAGGAATCTTACCAGAC

Protein sequence

FPNVDGIAPERAVAAAPNVVRLVSSPISGGISPERYGFPPIRNSWRDTKEPNCDGMEPLNRLSWRQRLCREVRLASCGGILPD
Homology
[Close]
BLAST of MC04g1370 vs. ExPASy TrEMBL
Match: A0A6N2LKG5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS238795 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.95e-05
Identity = 30/89 (33.71%), Postives = 45/89 (50.56%), Query Frame = 0 

Query: 1   FPNVDGIAPERAVAAAPNVVRLVSSPISGGISPERYGFPPIR------NSWRDTKEPNCD 60
           FP  +GI P + +    +++R  S+PIS G+ PE  G PP++      +S RD+  P   
Sbjct: 35  FPIDEGIPPVKTLIDKSSLLRDSSNPISFGMKPENEGIPPVKTLLDKDSSLRDSSNPTSF 94

Query: 61  GMEPLNRLSWRQRLCREVRLASCGGILPD 83
           GM+P   L          RL  C GI+P+
Sbjct: 95  GMKPEIILD---------RLPICDGIVPE 114

[Close]
BLAST of MC04g1370 vs. ExPASy TrEMBL
Match: A0A6N2LL64 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS238795 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.16e-04
Identity = 29/88 (32.95%), Postives = 48/88 (54.55%), Query Frame = 0 

Query: 1   FPNVDGIAPERAVAAAPNVVRLVSSPISGGISPERYGFPPIR------NSWRDTKEPNCD 60
           FP  +GI P + +    +++R  S+PIS G+ PE  G PP++      +S RD+  P   
Sbjct: 162 FPIDEGIPPVKTLIDKSSLLRDSSNPISFGMKPENEGIPPVKTLLDKDSSLRDSSNPTSF 221

Query: 61  GMEPLNR-LSW---RQRLCREVRLASCG 78
           GM+P    L W   R+ +  +V+L++ G
Sbjct: 222 GMKPEKAYLRWDSSREFIMTQVQLSNSG 249

The following BLAST results are available for this feature:
BLAST of MC04g1370 vs.
Match NameE-valueIdentityDescription
BLAST of MC04g1370 vs.
Match NameE-valueIdentityDescription
BLAST of MC04g1370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6N2LKG55.95e-0533.71Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS238795 PE=4 SV=... [more]
A0A6N2LL643.16e-0432.95Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS238795 PE=4 SV=... [more]
BLAST of MC04g1370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g1370.1MC04g1370.1mRNA