MC04g1168 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g1168
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 19724686 .. 19725441 (+)
RNA-Seq ExpressionMC04g1168
SyntenyMC04g1168
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGGAGACAGCCATAAAAATCCAAGTCACTACCAACTCCGTCTGCAGATTTATTTGACTGTAAAATCCGAATCCCCAAATGGACAAAAGGAAAGAGAGTGTAGCGACGACCAGCGGTCTTCTTCTTCTTCGTCCACTGCAGTCTGCAACTCAGAAATTGGCTATAAATTCGGCCTTATCGGCGACCTCCGAGCTCACAACAATGGCTTCTCTCAGGATTTCATTCGTCTTGAAGCTCTTCTTCTTCGCATTGCTTCTCATCGCCTCTAGGGTTTCTGCGAGTACTCCTTCCATTCACAAACGCCCTCGCATTCGTAAGTTCATCTAAATGCTTTTCTTTCTTTTTTTTTTTTTTAAGTCTGTGGTACAAAACCATGTTTTTTTAACGTAGATCAGATAAAAAGTATCGACGTGTTTGACATATATTTAATATCATAAAATTTGTATTTCTTTATTAATTTATTAACTTTGATTTTGACTTTTGGTGATGTTTACAAGGTAAACTGGGTATGGAGTATAGAAGTGTTGGGAAGGCTGTGTTGAGAGCAAAGGCAGCAAGTTATGATTTCCCATGGAAGGGTGGTTACAACCCTCCAAACAACAACCCTTGATACGATTTTCCGCACTATTTTCTCTACTTTTGTGGGTTAATGAGTATTGAATTATTATCATGTTACTCTTCTACTTTATTTTCTCAATGTTCACTTGCCAAATTGTGTTGTAATCGGGTATTAAATTTTTATCCATATGTCGACA

mRNA sequence

GTGGGAGACAGCCATAAAAATCCAAGTCACTACCAACTCCGTCTGCAGATTTATTTGACTGTAAAATCCGAATCCCCAAATGGACAAAAGGAAAGAGAGTGTAGCGACGACCAGCGGTCTTCTTCTTCTTCGTCCACTGCAGTCTGCAACTCAGAAATTGGCTATAAATTCGGCCTTATCGGCGACCTCCGAGCTCACAACAATGGCTTCTCTCAGGATTTCATTCGTCTTGAAGCTCTTCTTCTTCGCATTGCTTCTCATCGCCTCTAGGGTTTCTGCGAGTACTCCTTCCATTCACAAACGCCCTCGCATTCGTAAACTGGGTATGGAGTATAGAAGTGTTGGGAAGGCTGTGTTGAGAGCAAAGGCAGCAAGTTATGATTTCCCATGGAAGGGTGGTTACAACCCTCCAAACAACAACCCTTGATACGATTTTCCGCACTATTTTCTCTACTTTTGTGGGTTAATGAGTATTGAATTATTATCATGTTACTCTTCTACTTTATTTTCTCAATGTTCACTTGCCAAATTGTGTTGTAATCGGGTATTAAATTTTTATCCATATGTCGACA

Coding sequence (CDS)

ATGGACAAAAGGAAAGAGAGTGTAGCGACGACCAGCGGTCTTCTTCTTCTTCGTCCACTGCAGTCTGCAACTCAGAAATTGGCTATAAATTCGGCCTTATCGGCGACCTCCGAGCTCACAACAATGGCTTCTCTCAGGATTTCATTCGTCTTGAAGCTCTTCTTCTTCGCATTGCTTCTCATCGCCTCTAGGGTTTCTGCGAGTACTCCTTCCATTCACAAACGCCCTCGCATTCGTAAACTGGGTATGGAGTATAGAAGTGTTGGGAAGGCTGTGTTGAGAGCAAAGGCAGCAAGTTATGATTTCCCATGGAAGGGTGGTTACAACCCTCCAAACAACAACCCTTGA

Protein sequence

MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP
Homology
BLAST of MC04g1168 vs. NCBI nr
Match: XP_022141390.1 (uncharacterized protein LOC111011803 [Momordica charantia])

HSP 1 Score: 214 bits (545), Expect = 9.79e-70
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0

Query: 1   MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL 60
           MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL
Sbjct: 1   MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL 60

Query: 61  IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP 115
           IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP
Sbjct: 61  IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP 115

BLAST of MC04g1168 vs. NCBI nr
Match: KAG6602002.1 (hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.2 bits (178), Expect = 2.17e-14
Identity = 44/73 (60.27%), Postives = 51/73 (69.86%), Query Frame = 0

Query: 42  MASLRISFVLKLFFFALLLIASRVSASTPSIH-KRPRIRKLGMEYRSVGKAVLRAKAASY 101
           M S +IS  L  FF ALLL+A  VSA+  S   ++P IRKL MEY +V KA LRAK A Y
Sbjct: 1   MGSHKISMALP-FFLALLLVAFTVSAADISASFQKPHIRKLSMEYTTVEKAALRAKPAVY 60

Query: 102 DFPWKGGYNPPNN 113
           DFPWKGGY+PP N
Sbjct: 61  DFPWKGGYHPPAN 72

BLAST of MC04g1168 vs. NCBI nr
Match: TYK18975.1 (hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 4.36e-14
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0

Query: 42  MASLRISFVL-KLFFFALLLIASRVSASTPSIHKRPRIRK-LGMEYRSVGKAVLRAKAAS 101
           MAS+ I +++ KL FF LLLI +  +A  P +H+ PR RK + MEYRSV K  L AK A 
Sbjct: 1   MASINIIWIIFKLLFFTLLLITTS-TAFQPQLHE-PRFRKKMRMEYRSVRKGALGAKPAV 60

Query: 102 YDFPWKGGYNPPNNN 114
           YDFPWKGGYNPP+NN
Sbjct: 61  YDFPWKGGYNPPDNN 73

BLAST of MC04g1168 vs. NCBI nr
Match: KGN53822.1 (hypothetical protein Csa_015192 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 8.99e-14
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 0

Query: 50  VLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYN 109
           + KL FF LLLI +  SA  P +H+    +K+ MEYRSV KA L  K A YDFPWKGGYN
Sbjct: 11  IFKLLFFTLLLITTS-SAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVYDFPWKGGYN 70

Query: 110 PPNNN 114
           PP+NN
Sbjct: 71  PPHNN 74

BLAST of MC04g1168 vs. NCBI nr
Match: KAG6600177.1 (hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 60.1 bits (144), Expect = 2.76e-09
Identity = 44/75 (58.67%), Postives = 51/75 (68.00%), Query Frame = 0

Query: 42  MASLR-ISFVLKLFF-FALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAA- 101
           M SL+ ISFVLKL   FALLLIAS +SA    +   PRIRK+GMEY+ VGKAV+ AK   
Sbjct: 1   MVSLKMISFVLKLLVCFALLLIASPISA----MDNTPRIRKMGMEYKLVGKAVVVAKPVR 60

Query: 102 --SYDFPWKGGYNPP 111
             S D PW GGY+ P
Sbjct: 61  QLSADSPWGGGYHIP 71

BLAST of MC04g1168 vs. ExPASy TrEMBL
Match: A0A6J1CHY3 (uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011803 PE=4 SV=1)

HSP 1 Score: 214 bits (545), Expect = 4.74e-70
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0

Query: 1   MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL 60
           MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL
Sbjct: 1   MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL 60

Query: 61  IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP 115
           IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP
Sbjct: 61  IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP 115

BLAST of MC04g1168 vs. ExPASy TrEMBL
Match: A0A5D3D619 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00680 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.11e-14
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0

Query: 42  MASLRISFVL-KLFFFALLLIASRVSASTPSIHKRPRIRK-LGMEYRSVGKAVLRAKAAS 101
           MAS+ I +++ KL FF LLLI +  +A  P +H+ PR RK + MEYRSV K  L AK A 
Sbjct: 1   MASINIIWIIFKLLFFTLLLITTS-TAFQPQLHE-PRFRKKMRMEYRSVRKGALGAKPAV 60

Query: 102 YDFPWKGGYNPPNNN 114
           YDFPWKGGYNPP+NN
Sbjct: 61  YDFPWKGGYNPPDNN 73

BLAST of MC04g1168 vs. ExPASy TrEMBL
Match: A0A0A0KZM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.35e-14
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 0

Query: 50  VLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYN 109
           + KL FF LLLI +  SA  P +H+    +K+ MEYRSV KA L  K A YDFPWKGGYN
Sbjct: 11  IFKLLFFTLLLITTS-SAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVYDFPWKGGYN 70

Query: 110 PPNNN 114
           PP+NN
Sbjct: 71  PPHNN 74

BLAST of MC04g1168 vs. ExPASy TrEMBL
Match: A0A0A0L653 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175590 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 7.92e-05
Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 0

Query: 46  RISFVLKLFFFALLLIASRVSAST----PSIHKRPRIRKLGMEYRSV-GKA--VLRA-KA 105
           RI  +LKL FF+LLLI S VS +     P  HK PRIRK+G++ ++  GKA  V R  K 
Sbjct: 6   RIPLLLKLLFFSLLLIFSTVSTTNNVVQPLFHK-PRIRKIGVDKKTNDGKAGVVPRVIKP 65

Query: 106 ASYDFPWKGGYNPPN 112
            S DFPW GGY  P+
Sbjct: 66  TSEDFPWGGGYIHPH 79

BLAST of MC04g1168 vs. ExPASy TrEMBL
Match: A0A0A0L8B2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175600 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.31e-04
Identity = 37/81 (45.68%), Postives = 46/81 (56.79%), Query Frame = 0

Query: 45  LRISFVLKLFFFALLLIASRVSAST----PSIHKRPRIRKLGMEYRSVGKAVLRAKA--- 104
           ++IS +LKL FFA LL  +  + S     P +HK P IRK+ + YR   KAV+  K    
Sbjct: 6   MKISLMLKLLFFATLLFIAYTTISATNNIPLLHKPP-IRKMAVGYRKGEKAVVVPKVYKP 65

Query: 105 ASYDFPWKGGY--NPPN-NNP 115
            S DFPW GGY   PP  NNP
Sbjct: 66  TSADFPWGGGYVRRPPILNNP 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022141390.19.79e-70100.00uncharacterized protein LOC111011803 [Momordica charantia][more]
KAG6602002.12.17e-1460.27hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK18975.14.36e-1458.67hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa][more]
KGN53822.18.99e-1458.46hypothetical protein Csa_015192 [Cucumis sativus][more]
KAG6600177.12.76e-0958.67hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1CHY34.74e-70100.00uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A5D3D6192.11e-1458.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KZM04.35e-1458.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1[more]
A0A0A0L6537.92e-0550.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175590 PE=4 SV=1[more]
A0A0A0L8B22.31e-0445.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175600 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g1168.1MC04g1168.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane