MC04g1106 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1106
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Location	MC04: 19122186 .. 19128292 (-)
RNA-Seq Expression	MC04g1106
Synteny	MC04g1106

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTCCCGAGGACCCACATTGATGATGAGTATGCAAATACTTCCGAAGTTGATCCAAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGTTGGTATAATCTTTCTTTCTTTCTTTCATATTTTTAGACTTTTTTTAGACTTTATTCTCTCCTTCATAATTTATGTGGTTGATAGATGCAAAAGGATAGCTCTTGGCCTTAACTGAAGTTTTACTGGCAATCTAAACACAGGAATTAAAAATTGTGTTTCCCAATGCTCAACGAATGAATCGTGGTGGTCAGGTTAGTGTTCATTTTGCCTACCTTCTTGGTTTCTCTATTATTTATCCATTTCTACATTTAGCCTTTAAGTTGGAAGTTATTATTCTTTGCAGTCAAATACCATAAGGGGCCTTTTGTGACTTGAGCCTTTCTTGACATAGGCATACTTAATTATATTATTTGATAGATAGTTGATACTTAATTACACTATTTATGGATGGCTTTAAATTAGTAGCATGTTACAGATACTTCTAAATTTTCTCATAACAAGAACCTTGGGTGGTTCATGTAGTCAAAGGAGCAAGTGGTTGATCCAACGGCTTCAAGGTTATGGGTTCTAAGTTTTTTGATAGTCAGATAGCTAGGCCGTTAACAACTCATGGGCTTTTTAATGCTAGATGTTGGAAATGTGAAAAATGTTTCATGAGATAAGCTAAGATGTCTGTAAGTTGTAAGTTGGTCTAGCCACTTTTAGTTGTGAAATGTTTCTAATACTATAGTTTCGGGAGCAAGAAAATGATTGAAACTATAGTATTATATAACTTGCAAAATAAGAAAATGTAGAAGAATAACCCTTTTCTCTCCAAATCTTGAGTACAGCAATTGTTAAAGTTCTCCTTTTGAAAGAACTCATCAAATTTTTACCTGTGACAAAGAAAATTGAATGTATGATGTGTTTTTGGTTAAGTGGTGGTGGTAGTATTCTTATATCCTCCTCATTTGTAGGGCCTTTTGTTTGATGAAAATGTTCTATTATTTTTCAGGTTATCTCAGAGATTATAGAGACCTGTCGTGCTCACGAGTTCACTGACGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTGTCAGCCATTTACCTTTTGGTCCAACTGCATATTTCGGATTGTTGAATGTGGTAAGTGTTATTTTGGAATTCAGTTTTTTACTAATGGTTTTTTGCTCCAGGCGGGGCTTGTAGGCTCATCTTTTGTATCCAATTCAGGTGACGAGACATGAAATTAAGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAATTTTACCACAAAGGTACCACACATGTTTTGAATGATACCATCATCTGCTTGTCATTTTACATATTTCATGAAATGTATATATTCCTTTCAACCACGCGTCCTTTAGCTTAACATTTGTATTGCATTAGCAATTGTTACATAATGTTAAAATGCTGAATTTGTATTTCTAGAGAAGAAAACAATGAAAGAGGTTGAAGGTGAAAACGAAAACTTTCTGATGTACATTATTATTAGCTATTTTTTAAATCTCTAAGTTATTTGATTTCAAAAGTAATTAGTCTACTATTCAGTCAGGATTTTCCTGTTTTTGACATGCTGGTACCAGTATATCTTATCATCATTTTATATTTTCTCCCTGTTGTTCCCATAAGACTCCATTTTTTCTCTTTCTATTTGCCACCATATTCCATGTTGGCATGTGTGTTTGTGTGGTTGCATGTTGAGGACGTCTATGTCTATACGTTTTTCCTTATGCTTATTGCTCATTATATTTTGATAATGTGTTCTTCAGTGTCTTTTCTAATTTGTATCTTTTATTATATTTTTCTGCACCTTTTACTATACATTGTCCAATTTTTTTTGTAGTTGGGTGAAAGGACAGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACTAAACGTGTGATTACTTTTGCCAATCAGTCTGATTATATTTCATTCAGGTTGGTTCACTAATGAATTTTCGACCCGGTTGACATTGTTTTCTTTCTTGATTGTTTCATAAGTAGTCAACGTTCATGTTAGAGGCAGATTTTATTGGTGAAATATGGACCTCAAGTATTTATTGGTAAGATGGTAAAGAATTAAGGTTGGTGGATGCTTAAGGAATTTTGTATTATCCACCAACCTACTGACTAAATGGAAAATTGGGAGTATATCTGTTGTTTTTATATCAATTTCAGGATGCAAGAACCTTGGATTTAAATAGTCAGATGATAAAATTTGTGGTAGATTAGTAAGTTCTAAATATAAAAATGTATGCGCTTTTGACTAGCTAGAACTTCTTTATTCCTCGGTGGTTAATTACTTTTGCATTCAAGTATGGCTTTTGTTATTTCTCTTTCTCTGATTATATACGGATTATGAATCTGTGCTCAAAGATACTAGAGATCAACTCCCTATTACTCTTATTGGTAGAGAAGTTAAACAACAAAAAGGGTTCTTGACAGAGATGAAAGAACTTGACAACAATGGTAGGAAGAAGAGACTCATGCTCCCGTTTGCGAATCACAAGATAGCCTGGAATGCTTTTCTCTCCCTGATCAGTGAAACAAGAAAAGAGAGTGATAGAGACAAAAAGGGAGACCTCTGCTCCCCTCCCTCTCCCCCCTCTCATAAAGATTATATTCTGAAAGGAGAATCCCCCGCTAATGAGAGCTTTAAATACGGAATGGTTAACCCACCAAACAACCCATTCTATATTGACAAGATTTGGAGAGACAAATACCTTAAAATGGTTAAGTTCTTTTGTTGGGAGCTCAGCCACACCACAGTGCAATCAACACACAAGATTTGGTCCAAAAGAAGCACCCCCACATTGCTCTCTCTCCAAGCTGCTGTTTTTTCTGTTTTAAAGAAGCACCTGCACACCTATTGTTTGATACTATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGTAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTTTCAGGGAGAGCTAACGCTTGTTGAGTATTTTGGTTTGACACTGCTTCACACCCAAAAAGAAGCGAGCTACGTCTGAGTTAAACTTGGAGATGAAAGTGTTCTCTTAGTTATCTCTTGGTCTAAATGCTCCCCCCTCTTTCATCACTACTATAGTTTTGCCTCCCTTCTATCTAACTGGAGAGCCTTTTTGTAGCCCACTCATGGGTTCCTCCCTTTTGTATTCATATTTCATATTATCAATGAAATAGTTTCTTTTCAAGAAAAAAAAAAAAGGCTGAGACATGGGCATATTTTCATTTCTTGTGATTTTGCTGCTGGATTTTGGAACAAGGCTCTATTGTCCTTTGGTTGGCAAACCCCCTCCACAAAAATCCAAAGGCAATCCTTCAACTGCTTCTGGTGAGCCATCATTTTAAAAAGAATGGAGGAATTATATGGGTGAATTTGGTCAGGGTCTTCCTTTGGAGCTTATGGTTATAAAGAAACAAGAGGATATTCAACGACACCCACCTTCCTTTTAACTTATTTTTTGACAGATTTTTTACTCCCCATTTATTAATTATAGTCTTAATGACTTGATAAATTGTTAGGCCTTTTCGTAATCCAATTTTAAGGGACCCTTTTGTATATTTCATACCATCAATGAAATATCAGTTTCTTATATATTAAAAAAAAATCGAGATCATCATTGCTTTTCATTGCAACGCTTAGTGGAAGAATAAGATTAGTGGTAATGTGCCTAAGGTTATTCAAGAAAATTTAGCAAACGCATGAACACAAATAGAAAAAGTTTCAATTTCTCTCTCTGTACAGTTAATTTTTCATTTAGAACTGTCTTTAAATGGCCTCGTGAATGAAAGTGTTCATTCATTTTTAAAAGTTGTGTTTCCTCCGTAGTAAGTAGCTCTTTGCTAATTTTTGCTTGTTTTCTTTGATGATTTGGATTTTAAAACTGTAGGCATCATATTTATGAGAAGCAAGGGGGTGTTAAATCAATTGAGCTGAAGGAGATCGGTCCTCGGTTTGAATTGCGATTGTATCAGGTACCTATTCTGTGATTCAGTTCATTGCTTTGTCCATAACATGCATTTCAGTTGGGCTTTCACAATATTGGAGAAAGCATTTTAGTAAACAAATATTAACGAGCACTCAATGGGTTCAAACGTTTTACTTGTAAGTATTTGATAAACAAACAAATTAACTAAGCAACCATGATCTATGTTTATAAGGTCAAAAAGACTTTGTTTATAATATTTTCTATCATCCTTTTGTGTTTTGTTGGACTATGCGATTTCGTTCAATTTCTCTGACACTAAAATTTCATTTGATAATGATTTTGTTTTTTGTTTTTCGTTTTCAAAAATCATGTTTGCTTCCTCACAATTGCTTTGGTATGCTACACATTTCTTTAAAAAATATTTGAATTCGTAGCTAAATTTTAAAAACAAAAATAAAATTTTAGAACTTAGATAATTTTTTTCTTTAGTTTTTAAAATTTGACTCAGATTTTGAAAATGTTTTTATAGAGTATATATCAAAGTAAGGAAATACATGAGTAGAAGTATGGTAGAATCCAAATGGCTAAAATAGATTGAAAGATAAAAAGATAGGACTACAATTATCTCCAAGTAATTTGACTGGACCCCCTCCCCTGTTGAGATTACTCAAGTCTAAACTAAACTGACCACCTTCATCCCTTTCCCGCAGTCTATTTATAACAAATCCCTTCTAACCAATTTCGTAACTAATTACTAACATACCCTTACTAGTCTACTAATATCCCTAATTACCCAAAAAATTCCTATCAAAGTAGTTTTTATAAACTTGATTTTCAAAAACAGAAAATCTAAAATGAAATGGTTATAAGCTCTTTTTTGTTTGCAGTTGTTCATACTTGATTTTGATTTTAAGTCTGGCAGGCTTTTCTGGTTTCTCATGCAGTACTAGACATCACCTGCAATTTTATCAAAGATTAAAAATAAATTGGTTACATCTCAACATTATCCTAGTACTATTAGTAATCTCAATTTTCATGTTGATGTTACAGTGAATTTTTTTTCGTATCATCTATAATATCAGAATTTTATGACATGATGAAGTCTATTATTAAAAAATAATCCAAACTATTTTGCTCTGGCCAATAAGATGGTTGTGTAATATAGATGTCTTCAGATTCTGACATTGTTAAATTTTCTCAGCATTCATAGAATATGGTTGTGTAATATGAAGATTGTTGCTCTAGCTTAATGCTTTTATTTTTGTTCACAAGATATAGGTTGTTCTGTGGATTAATTCTGAAATATCTGGATCTGATCATATTTTATTAAACTTTTATTTTTTCTTCATTCGTTTTTCGTCTTTTGATCCGTATCACCAGTCCTGCCTTGCCCGTGCTCATACGATTAGAACGAAACTTGCAGTTTTGTTGTGTCGGAGTATTGTTTCTCGGCTGGTAAGCCAATAATTATTTCAATGTGTATCTTAATTTCCCTTTCTGGTTTTCTTGGATGGTGGTTGCAGATCAAGTTAGGAACTGTTGATCAAACGGAAGCTCAGAATGAATGGGTGATTAGGCCATACATGAAAACAACCAAGAAACGCAAGTTTCTTGGTGATTGAGAAACAGCTAAAGTAAGCAGCTTATTTTCTTTTGCACAATCACATTGTTTTTCTAAAGGTTATATTTTGTTGGGTTGGCAATGCCAAATTTTCTCTAGATTATTGACAGATTTAGCTGAATCTTTATATTAGAAGTCAGTTTTCTTGGTGGAGAAGTAAAAGGGAACGAGTCTGACTTTTTGTATTCTTCACGTCCTAGATTACGTTTGAAAAACATGAAAGTTGGTGAAGGATTAAACAAAACACAGAATGAGAATGAGAATTATCATTCGAAAATACCAAATGAATGATTAGATTGGGTGAAGCCTCCATACTTACCCGTGTATGAGATTGTTTTTCTTTAATATCTTTACGTCTTATCGGTG

mRNA sequence

TCAGTCCCGAGGACCCACATTGATGATGAGTATGCAAATACTTCCGAAGTTGATCCAAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTAAAAATTGTGTTTCCCAATGCTCAACGAATGAATCGTGGTGGTCAGGTTATCTCAGAGATTATAGAGACCTGTCGTGCTCACGAGTTCACTGACGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTGTCAGCCATTTACCTTTTGGTCCAACTGCATATTTCGGATTGTTGAATGTGGTGACGAGACATGAAATTAAGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAATTTTACCACAAAGTTGGGTGAAAGGACAGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACTAAACGTGTGATTACTTTTGCCAATCAGTCTGATTATATTTCATTCAGGCATCATATTTATGAGAAGCAAGGGGGTGTTAAATCAATTGAGCTGAAGGAGATCGGTCCTCGGTTTGAATTGCGATTGTATCAGATCAAGTTAGGAACTGTTGATCAAACGGAAGCTCAGAATGAATGGGTGATTAGGCCATACATGAAAACAACCAAGAAACGCAAGTTTCTTGGTGATTGAGAAACAGCTAAAGTAAGCAGCTTATTTTCTTTTGCACAATCACATTGTTTTTCTAAAGGTTATATTTTGTTGGGTTGGCAATGCCAAATTTTCTCTAGATTATTGACAGATTTAGCTGAATCTTTATATTAGAAGTCAGTTTTCTTGGTGGAGAAGTAAAAGGGAACGAGTCTGACTTTTTGTATTCTTCACGTCCTAGATTACGTTTGAAAAACATGAAAGTTGGTGAAGGATTAAACAAAACACAGAATGAGAATGAGAATTATCATTCGAAAATACCAAATGAATGATTAGATTGGGTGAAGCCTCCATACTTACCCGTGTATGAGATTGTTTTTCTTTAATATCTTTACGTCTTATCGGTG

Coding sequence (CDS)

TCAGTCCCGAGGACCCACATTGATGATGAGTATGCAAATACTTCCGAAGTTGATCCAAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTAAAAATTGTGTTTCCCAATGCTCAACGAATGAATCGTGGTGGTCAGGTTATCTCAGAGATTATAGAGACCTGTCGTGCTCACGAGTTCACTGACGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTGTCAGCCATTTACCTTTTGGTCCAACTGCATATTTCGGATTGTTGAATGTGGTGACGAGACATGAAATTAAGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAATTTTACCACAAAGTTGGGTGAAAGGACAGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACTAAACGTGTGATTACTTTTGCCAATCAGTCTGATTATATTTCATTCAGGCATCATATTTATGAGAAGCAAGGGGGTGTTAAATCAATTGAGCTGAAGGAGATCGGTCCTCGGTTTGAATTGCGATTGTATCAGATCAAGTTAGGAACTGTTGATCAAACGGAAGCTCAGAATGAATGGGTGATTAGGCCATACATGAAAACAACCAAGAAACGCAAGTTTCTTGGTGATTGA

Protein sequence

SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

Homology

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BLAST of MC04g1106 vs. ExPASy Swiss-Prot
Match: Q96G21 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Homo sapiens OX=9606 GN=IMP4 PE=1 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-73
Identity = 132/224 (58.93%), Postives = 170/224 (75.89%), Query Frame = 0


Query: 5   THIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETC 64
           +H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   +  ++  C
Sbjct: 69  SHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRAC 128

Query: 65  RAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPH 124
           +A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +GTM EA PH
Sbjct: 129 KANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTMSEAKPH 188

Query: 125 IILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVKSIEL 184
           +I + F+++LG+R ++IL++LFPVPK D+ RVITFANQ DYISFRHH+Y+K    +++EL
Sbjct: 189 LITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKKTDH-RNVEL 248

Query: 185 KEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 228
            E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 249 TEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of MC04g1106 vs. ExPASy Swiss-Prot
Match: Q8VHZ7 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus musculus OX=10090 GN=Imp4 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-73
Identity = 132/224 (58.93%), Postives = 170/224 (75.89%), Query Frame = 0


Query: 5   THIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETC 64
           +H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   +  ++  C
Sbjct: 69  SHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRAC 128

Query: 65  RAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPH 124
           +A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +GTM EA PH
Sbjct: 129 KANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTMSEAKPH 188

Query: 125 IILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVKSIEL 184
           +I + F+++LG+R ++IL++LFPVPK D+ RVITFANQ DYISFRHH+Y+K    +++EL
Sbjct: 189 LITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKKTDH-RNVEL 248

Query: 185 KEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 228
            E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 249 TEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of MC04g1106 vs. ExPASy Swiss-Prot
Match: Q5R947 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Pongo abelii OX=9601 GN=IMP4 PE=2 SV=2)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-73
Identity = 132/224 (58.93%), Postives = 170/224 (75.89%), Query Frame = 0


Query: 5   THIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETC 64
           +H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   +  ++  C
Sbjct: 69  SHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRAC 128

Query: 65  RAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPH 124
           +A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +GTM EA PH
Sbjct: 129 KANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTMSEAKPH 188

Query: 125 IILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVKSIEL 184
           +I + F+++LG+R ++IL++LFPVPK D+ RVITFANQ DYISFRHH+Y+K    +++EL
Sbjct: 189 LITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKKTDH-RNVEL 248

Query: 185 KEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 228
            E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 249 TEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of MC04g1106 vs. ExPASy Swiss-Prot
Match: Q5PQR5 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus norvegicus OX=10116 GN=Imp4 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-73
Identity = 132/224 (58.93%), Postives = 170/224 (75.89%), Query Frame = 0


Query: 5   THIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETC 64
           +H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   +  ++  C
Sbjct: 69  SHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRAC 128

Query: 65  RAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPH 124
           +A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +GTM EA PH
Sbjct: 129 KANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTMSEAKPH 188

Query: 125 IILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVKSIEL 184
           +I + F+++LG+R ++IL++LFPVPK D+ RVITFANQ DYISFRHH+Y+K    +++EL
Sbjct: 189 LITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKKTDH-RNVEL 248

Query: 185 KEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 228
            E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 249 TEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of MC04g1106 vs. ExPASy Swiss-Prot
Match: Q0VD01 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Bos taurus OX=9913 GN=IMP4 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.0e-73
Identity = 131/223 (58.74%), Postives = 169/223 (75.78%), Query Frame = 0


Query: 6   HIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCR 65
           H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   +  ++  C+
Sbjct: 70  HVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACK 129

Query: 66  AHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHI 125
           A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +GT  EA PH+
Sbjct: 130 ANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTASEAKPHL 189

Query: 126 ILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVKSIELK 185
           I++ F+++LG+R ++IL++LFPVPK D++RVITFANQ DYISFRHH+Y+K    +++EL 
Sbjct: 190 IMHGFSSRLGKRVSDILRYLFPVPKDDSRRVITFANQDDYISFRHHVYKKTNH-RNVELT 249

Query: 186 EIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 228
           E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Sbjct: 250 EVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFL 288

[Close]

BLAST of MC04g1106 vs. NCBI nr
Match: XP_022157893.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia] >XP_022157894.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia])

HSP 1 Score: 468 bits (1203), Expect = 2.54e-165
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI
Sbjct: 65  AVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK
Sbjct: 185 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 229
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 293

[Close]

BLAST of MC04g1106 vs. NCBI nr
Match: XP_022993779.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima])

HSP 1 Score: 459 bits (1180), Expect = 8.11e-162
Identity = 219/229 (95.63%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVI+EI
Sbjct: 65  AVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEKQGG K
Sbjct: 185 AYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKQGGAK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 229
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 293

[Close]

BLAST of MC04g1106 vs. NCBI nr
Match: XP_022939256.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata] >XP_022939257.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata] >XP_023549778.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita pepo subsp. pepo] >XP_023549779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita pepo subsp. pepo] >XP_023549780.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457 bits (1175), Expect = 4.69e-161
Identity = 218/229 (95.20%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVI+EI
Sbjct: 65  AVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG K
Sbjct: 185 AYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 229
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 293

[Close]

BLAST of MC04g1106 vs. NCBI nr
Match: XP_038907229.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Benincasa hispida])

HSP 1 Score: 456 bits (1172), Expect = 1.34e-160
Identity = 220/228 (96.49%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYAN SEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI
Sbjct: 65  AVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG K
Sbjct: 185 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG 228
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292

[Close]

BLAST of MC04g1106 vs. NCBI nr
Match: XP_008465711.1 (PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Cucumis melo] >KAA0066046.1 U3 small nucleolar ribonucleoprotein IMP4 [Cucumis melo var. makuwa] >TYJ99850.1 U3 small nucleolar ribonucleoprotein IMP4 [Cucumis melo var. makuwa])

HSP 1 Score: 456 bits (1172), Expect = 1.34e-160
Identity = 220/228 (96.49%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYAN SEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI
Sbjct: 65  AVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG K
Sbjct: 185 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG 228
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292

[Close]

BLAST of MC04g1106 vs. ExPASy TrEMBL
Match: A0A6J1DUL2 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Momordica charantia OX=3673 GN=LOC111024500 PE=4 SV=1)

HSP 1 Score: 468 bits (1203), Expect = 1.23e-165
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI
Sbjct: 65  AVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK
Sbjct: 185 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 229
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 293

[Close]

BLAST of MC04g1106 vs. ExPASy TrEMBL
Match: A0A6J1K117 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita maxima OX=3661 GN=LOC111489687 PE=4 SV=1)

HSP 1 Score: 459 bits (1180), Expect = 3.93e-162
Identity = 219/229 (95.63%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVI+EI
Sbjct: 65  AVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEKQGG K
Sbjct: 185 AYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKQGGAK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 229
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 293

[Close]

BLAST of MC04g1106 vs. ExPASy TrEMBL
Match: A0A6J1FFE4 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita moschata OX=3662 GN=LOC111445227 PE=4 SV=1)

HSP 1 Score: 457 bits (1175), Expect = 2.27e-161
Identity = 218/229 (95.20%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVI+EI
Sbjct: 65  AVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG K
Sbjct: 185 AYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 229
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 293

[Close]

BLAST of MC04g1106 vs. ExPASy TrEMBL
Match: A0A5D3BJ53 (U3 small nucleolar ribonucleoprotein IMP4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00630 PE=4 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 6.50e-161
Identity = 220/228 (96.49%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYAN SEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI
Sbjct: 65  AVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG K
Sbjct: 185 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG 228
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292

[Close]

BLAST of MC04g1106 vs. ExPASy TrEMBL
Match: A0A1S3CPI1 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucumis melo OX=3656 GN=LOC103503328 PE=4 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 6.50e-161
Identity = 220/228 (96.49%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPRTHIDDEYAN SEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI
Sbjct: 65  AVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPE
Sbjct: 125 IETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMGTMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVK 180
           AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG K
Sbjct: 185 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAK 244

Query: 181 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG 228
           SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 245 SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292

[Close]

BLAST of MC04g1106 vs. TAIR 10
Match: AT1G63780.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 389.4 bits (999), Expect = 2.0e-108
Identity = 177/230 (76.96%), Postives = 209/230 (90.87%), Query Frame = 0


Query: 1   SVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEI 60
           +VPR+HIDDEYAN +E DPKIL+TTSR+PSAPL +F KELK VFPN+QR+NRG QVISEI
Sbjct: 65  AVPRSHIDDEYANATEADPKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGSQVISEI 124

Query: 61  IETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPE 120
           IET R+H+FTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRH+I DKK++G MPE
Sbjct: 125 IETARSHDFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDISDKKSIGKMPE 184

Query: 121 AYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEK-QGGV 180
            YPH+I NNFTT++G+R  NILKH+FP PK D KR++TF+NQSDYISFR+H+Y+K +GG 
Sbjct: 185 QYPHLIFNNFTTQMGQRVGNILKHIFPAPKLDAKRIVTFSNQSDYISFRNHVYDKGEGGP 244

Query: 181 KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 230
           KSIELKEIGPRFELRLYQ+KLGTV+Q EA+ EWVIRPYM T+KKRKF+G+
Sbjct: 245 KSIELKEIGPRFELRLYQVKLGTVEQNEAEIEWVIRPYMNTSKKRKFIGE 294

[Close]

BLAST of MC04g1106 vs. TAIR 10
Match: AT4G01560.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 158.7 bits (400), Expect = 5.6e-39
Identity = 90/224 (40.18%), Postives = 128/224 (57.14%), Query Frame = 0


Query: 16  EVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILV 75
           E+ PK+L+TT R  S        EL  V PN+    RG   + +I+E     +FT +I+V
Sbjct: 124 EIAPKVLLTTCRFNSTRGPALISELLSVIPNSHYQKRGTYDLKKIVEYATKKDFTSLIVV 183

Query: 76  HEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLG 135
           H +R  PD L++  LP GPTA+F L N+V R +IK+    G      P ++LNNFTT+LG
Sbjct: 184 HTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNH---GNPTSHQPELVLNNFTTRLG 243

Query: 136 ERTANILKHLFPVPKPD--TKRVITFANQSDYISFRHHIY--------EKQGGVKSIE-- 195
            R     + LFP P P+   +RV+TF NQ D+I FRHH Y          +G  ++I+  
Sbjct: 244 NRVGRFFQSLFP-PDPNFRGRRVVTFHNQRDFIFFRHHRYIFETKESKSDKGKEETIKPR 303

Query: 196 LKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFL 228
           L+E GPRF L+L  ++ GT D    + EWV +P M T+++R FL
Sbjct: 304 LQECGPRFTLKLVTLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 343

The following BLAST results are available for this feature:

BLAST of MC04g1106 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96G21	1.2e-73	58.93	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Homo sapiens OX=9606 GN=IMP...	[more]
Q8VHZ7	1.2e-73	58.93	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus musculus OX=10090 GN=Im...	[more]
Q5R947	1.2e-73	58.93	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Pongo abelii OX=9601 GN=IMP...	[more]
Q5PQR5	1.2e-73	58.93	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus norvegicus OX=10116 ...	[more]
Q0VD01	2.0e-73	58.74	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Bos taurus OX=9913 GN=IMP4 ...	[more]

BLAST of MC04g1106 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157893.1	2.54e-165	99.56	U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia] >XP_0221...	[more]
XP_022993779.1	8.11e-162	95.63	U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]	[more]
XP_022939256.1	4.69e-161	95.20	U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata] >XP_02293...	[more]
XP_038907229.1	1.34e-160	96.49	U3 small nucleolar ribonucleoprotein protein IMP4 [Benincasa hispida]	[more]
XP_008465711.1	1.34e-160	96.49	PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Cucumis melo] >KAA...	[more]

BLAST of MC04g1106 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUL2	1.23e-165	99.56	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Momordica charantia OX=3673...	[more]
A0A6J1K117	3.93e-162	95.63	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1FFE4	2.27e-161	95.20	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita moschata OX=3662 ...	[more]
A0A5D3BJ53	6.50e-161	96.49	U3 small nucleolar ribonucleoprotein IMP4 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CPI1	6.50e-161	96.49	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of MC04g1106 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63780.1	2.0e-108	76.96	Ribosomal RNA processing Brix domain protein	[more]
AT4G01560.1	5.6e-39	40.18	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 22..198 e-value: 4.2E-63 score: 225.6
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 26..196 e-value: 3.6E-34 score: 118.6
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 19..204 score: 45.191921
None	No IPR available	GENE3D	3.40.50.10480		coord: 19..194 e-value: 6.2E-48 score: 164.8
None	No IPR available	PANTHER	PTHR22734:SF2	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4	coord: 2..226
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 18..201
IPR044281	U3 snoRNP protein/Ribosome production factor 1	PANTHER	PTHR22734	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4	coord: 2..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1106.1	MC04g1106.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0034457	Mpp10 complex
cellular_component	GO:0016363	nuclear matrix
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0042134	rRNA primary transcript binding
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0019843	rRNA binding