MC04g1061 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g1061
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 18681174 .. 18681449 (-)
RNA-Seq ExpressionMC04g1061
SyntenyMC04g1061
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGAGCAGGCCCTTGGGGAACACGAAGACTTCGCCTTTTTTTATGGTTTTGGCGACGAGTTTGTTGGCGGTGGTGATGAAGCCCACGTCCAGCTCGCCGTCGAGCACGAACACGATCTCGGTGGCGCGTGGGTGCACGTGCGGCGGGTTGAGGCCGCCGGCCGGGGAGTAGTCGACATGGGCGAGGGAAACGCCGAGGGTGTTGAGGCCGGGGATTTTGTCGACGTTGGCCGCCGTCACGGCGGAGCCGACCGAGTTGTTGATGGCGGCGGCGTT

mRNA sequence

GTGGAGCAGGCCCTTGGGGAACACGAAGACTTCGCCTTTTTTTATGGTTTTGGCGACGAGTTTGTTGGCGGTGGTGATGAAGCCCACGTCCAGCTCGCCGTCGAGCACGAACACGATCTCGGTGGCGCGTGGGTGCACGTGCGGCGGGTTGAGGCCGCCGGCCGGGGAGTAGTCGACATGGGCGAGGGAAACGCCGAGGGTGTTGAGGCCGGGGATTTTGTCGACGTTGGCCGCCGTCACGGCGGAGCCGACCGAGTTGTTGATGGCGGCGGCGTT

Coding sequence (CDS)

GTGGAGCAGGCCCTTGGGGAACACGAAGACTTCGCCTTTTTTTATGGTTTTGGCGACGAGTTTGTTGGCGGTGGTGATGAAGCCCACGTCCAGCTCGCCGTCGAGCACGAACACGATCTCGGTGGCGCGTGGGTGCACGTGCGGCGGGTTGAGGCCGCCGGCCGGGGAGTAGTCGACATGGGCGAGGGAAACGCCGAGGGTGTTGAGGCCGGGGATTTTGTCGACGTTGGCCGCCGTCACGGCGGAGCCGACCGAGTTGTTGATGGCGGCGGCGTT

Protein sequence

VEQALGEHEDFAFFYGFGDEFVGGGDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVVDMGEGNAEGVEAGDFVDVGRRHGGADRVVDGGGV
Homology
BLAST of MC04g1061 vs. NCBI nr
Match: RWV81621.1 (hypothetical protein GW17_00056938, partial [Ensete ventricosum])

HSP 1 Score: 98.2 bits (243), Expect = 6.32e-23
Identity = 57/89 (64.04%), Postives = 64/89 (71.91%), Query Frame = 0

Query: 1  VEQALGEHEDFAFFYGFGDEFVGGGDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVVDM 60
          V+QA GE ED A   G GD+ VGGGDEAHV+ AVEHE DLGGA V VRRV+ AG GVVD 
Sbjct: 5  VDQAAGEDEDVALGDGLGDQLVGGGDEAHVEGAVEHEDDLGGAGVGVRRVQPAG-GVVDA 64

Query: 61 GEGNAEGVEAGDFVDVGRRHGGADRVVDG 89
          G G+A+GVEA D + VG RH GA   V G
Sbjct: 65 GHGHAQGVEARDLLHVGGRHQGAHGGVGG 92

BLAST of MC04g1061 vs. NCBI nr
Match: KAG6418092.1 (hypothetical protein SASPL_120291 [Salvia splendens])

HSP 1 Score: 81.3 bits (199), Expect = 5.87e-18
Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 0

Query: 7  EHEDFAFFYGFGDEFVGGGDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVVDMGEGNAE 66
          E+ED  F  G GDE VGGGDEA V+ A EH+HDLGGAWV V RVEAA RGVVD G+G+AE
Sbjct: 10 ENEDVPFLDGLGDEDVGGGDEADVEFAFEHQHDLGGAWVLVGRVEAA-RGVVDAGQGDAE 69

Query: 67 GVE 69
           V+
Sbjct: 70 CVD 71

BLAST of MC04g1061 vs. NCBI nr
Match: RRT46802.1 (hypothetical protein B296_00054222 [Ensete ventricosum] >RWV78361.1 hypothetical protein GW17_00060685 [Ensete ventricosum] >RWV78363.1 hypothetical protein GW17_00060683 [Ensete ventricosum] >RWW61064.1 hypothetical protein BHE74_00031893 [Ensete ventricosum] >RZS27251.1 hypothetical protein BHM03_00060691 [Ensete ventricosum])

HSP 1 Score: 60.5 bits (145), Expect = 7.28e-09
Identity = 41/88 (46.59%), Postives = 52/88 (59.09%), Query Frame = 0

Query: 1   VEQALGEHEDFAFFYGFGDEFVGG--GDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVV 60
           V+QALGEH+       FG+E V G  GDE+HV+ A +H   L    + V RV+A  R  +
Sbjct: 55  VDQALGEHKHITLVEHFGEELVVGVGGDESHVERAFQHRQYLRRPGMGVGRVKAV-RCEI 114

Query: 61  DMGEGNAEGVEAGDFVDVGRRHGGADRV 86
               G+AEGVEAG+ V V  RH GAD V
Sbjct: 115 HSSHGDAEGVEAGNSVHVHERHVGADFV 141

BLAST of MC04g1061 vs. NCBI nr
Match: THU71190.1 (hypothetical protein C4D60_Mb08t32920 [Musa balbisiana])

HSP 1 Score: 58.2 bits (139), Expect = 7.80e-08
Identity = 44/88 (50.00%), Postives = 54/88 (61.36%), Query Frame = 0

Query: 1   VEQALGEHEDFAFFYGFGDE-FVG-GGDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVV 60
           V++ALGEH+       FGDE  VG GGDEA V+ A +H  +L    + VRRV+A  R VV
Sbjct: 74  VDEALGEHKHITLAKHFGDEPVVGVGGDEADVERAFQHRLNLRRPGMDVRRVKAKRR-VV 133

Query: 61  DMGEGNAEGVEAGDFVDVGRRHGGADRV 86
             G G+AEGVEAG+      RH GAD V
Sbjct: 134 HPGHGDAEGVEAGNS----ERHVGADFV 156

BLAST of MC04g1061 vs. NCBI nr
Match: THU71194.1 (hypothetical protein C4D60_Mb08t32960 [Musa balbisiana])

HSP 1 Score: 57.4 bits (137), Expect = 8.52e-08
Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 0

Query: 1   VEQALGEHEDFAFFYGFGDE-FVG-GGDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVV 60
           V++ALGEH+       FGDE  VG GGDEA V+ A +H  +L    + VRRV+A  R VV
Sbjct: 75  VDEALGEHKHITLAKHFGDEPVVGVGGDEADVERAFQHRLNLRRPGMDVRRVKAKRR-VV 134

Query: 61  DMGEGNAEGVEAGDFVDV 76
             G G+AEGVEAG+ V V
Sbjct: 135 HPGHGDAEGVEAGNSVRV 151

BLAST of MC04g1061 vs. ExPASy TrEMBL
Match: A0A444C6X6 (Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_00056938 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.06e-23
Identity = 57/89 (64.04%), Postives = 64/89 (71.91%), Query Frame = 0

Query: 1  VEQALGEHEDFAFFYGFGDEFVGGGDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVVDM 60
          V+QA GE ED A   G GD+ VGGGDEAHV+ AVEHE DLGGA V VRRV+ AG GVVD 
Sbjct: 5  VDQAAGEDEDVALGDGLGDQLVGGGDEAHVEGAVEHEDDLGGAGVGVRRVQPAG-GVVDA 64

Query: 61 GEGNAEGVEAGDFVDVGRRHGGADRVVDG 89
          G G+A+GVEA D + VG RH GA   V G
Sbjct: 65 GHGHAQGVEARDLLHVGGRHQGAHGGVGG 92

BLAST of MC04g1061 vs. ExPASy TrEMBL
Match: A0A0A9J7A5 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.41e-10
Identity = 40/79 (50.63%), Postives = 47/79 (59.49%), Query Frame = 0

Query: 1   VEQALGEHEDFAFFYGFGDEFVGGGDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVVDM 60
           V  A GE E  A   G  +E V  GDEAH++ A+ HE DL  A VHVRRV AA R VV  
Sbjct: 113 VHDAAGEDEHLALGDGPAEEHVRRGDEAHLEGAIHHEEDLRSARVHVRRVHAAPRRVVHA 172

Query: 61  GEGNAEGVEAGDFVDVGRR 79
             G+A+GVE  D + V RR
Sbjct: 173 RHGHAQGVEPRDLLHVRRR 191

BLAST of MC04g1061 vs. ExPASy TrEMBL
Match: A0A0A9PHS3 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.41e-10
Identity = 40/79 (50.63%), Postives = 47/79 (59.49%), Query Frame = 0

Query: 1   VEQALGEHEDFAFFYGFGDEFVGGGDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVVDM 60
           V  A GE E  A   G  +E V  GDEAH++ A+ HE DL  A VHVRRV AA R VV  
Sbjct: 113 VHDAAGEDEHLALGDGPAEEHVRRGDEAHLEGAIHHEEDLRSARVHVRRVHAAPRRVVHA 172

Query: 61  GEGNAEGVEAGDFVDVGRR 79
             G+A+GVE  D + V RR
Sbjct: 173 RHGHAQGVEPRDLLHVRRR 191

BLAST of MC04g1061 vs. ExPASy TrEMBL
Match: A0A0A9P867 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.39e-10
Identity = 40/80 (50.00%), Postives = 48/80 (60.00%), Query Frame = 0

Query: 1   VEQALGEHEDFAFFYGFGDEFVGGGDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVVDM 60
           V +A GE E  A      +E V  GDEAH++ A+ HE DL GA VHVRRV AA R VV  
Sbjct: 120 VHEAAGEDEHLALGDDPAEEPVRRGDEAHLEGAIHHEEDLRGARVHVRRVHAAPRRVVGA 179

Query: 61  GEGNAEGVEAGDFVDVGRRH 80
             G+ +GVE  D + V RRH
Sbjct: 180 RHGHGQGVEPRDPLHVCRRH 199

BLAST of MC04g1061 vs. ExPASy TrEMBL
Match: A0A444BXJ7 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00054222 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.52e-09
Identity = 41/88 (46.59%), Postives = 52/88 (59.09%), Query Frame = 0

Query: 1   VEQALGEHEDFAFFYGFGDEFVGG--GDEAHVQLAVEHEHDLGGAWVHVRRVEAAGRGVV 60
           V+QALGEH+       FG+E V G  GDE+HV+ A +H   L    + V RV+A  R  +
Sbjct: 55  VDQALGEHKHITLVEHFGEELVVGVGGDESHVERAFQHRQYLRRPGMGVGRVKAV-RCEI 114

Query: 61  DMGEGNAEGVEAGDFVDVGRRHGGADRV 86
               G+AEGVEAG+ V V  RH GAD V
Sbjct: 115 HSSHGDAEGVEAGNSVHVHERHVGADFV 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
RWV81621.16.32e-2364.04hypothetical protein GW17_00056938, partial [Ensete ventricosum][more]
KAG6418092.15.87e-1868.25hypothetical protein SASPL_120291 [Salvia splendens][more]
RRT46802.17.28e-0946.59hypothetical protein B296_00054222 [Ensete ventricosum] >RWV78361.1 hypothetical... [more]
THU71190.17.80e-0850.00hypothetical protein C4D60_Mb08t32920 [Musa balbisiana][more]
THU71194.18.52e-0851.28hypothetical protein C4D60_Mb08t32960 [Musa balbisiana][more]
Match NameE-valueIdentityDescription
A0A444C6X63.06e-2364.04Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_0005693... [more]
A0A0A9J7A51.41e-1050.63Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9PHS31.41e-1050.63Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9P8672.39e-1050.00Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A444BXJ73.52e-0946.59Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00054222 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g1061.1MC04g1061.1mRNA