MC04g1036 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1036
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	AAI domain-containing protein
Location	MC04: 18443312 .. 18443668 (+)
RNA-Seq Expression	MC04g1036
Synteny	MC04g1036

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCTCCAGAAGTACTTGCAAGGCTTTGGTTGTGGCGGCCGGCTTTCTGATTCTGGTGGCTTTCATTCACCCAGCCACGGCAGCCGGAGAGTGCGGGAAGATGACAATCGGGACAGCGGCGTATAGCCCGATATCGTGCACGGGGGCGGTGGCGGATGTGAAAGCTAAGGTCTCGCCGGAGTGCTGCAGCAGGGTGGCGGCCATGCTTAAAGCTACTCCAAAATGCTTTTGTGCCATTCTCCTTTTTCCCAAGACTAGAAAACAAGGAGTTAACCCAGCAATTGGCCTTACTATCCCCAAACGCTGCAACATCAAAAACCGTCCCGCCGGCAAGAAATGTGGAAGTAAGCTC

mRNA sequence

ATGGCCTCCTCCAGAAGTACTTGCAAGGCTTTGGTTGTGGCGGCCGGCTTTCTGATTCTGGTGGCTTTCATTCACCCAGCCACGGCAGCCGGAGAGTGCGGGAAGATGACAATCGGGACAGCGGCGTATAGCCCGATATCGTGCACGGGGGCGGTGGCGGATGTGAAAGCTAAGGTCTCGCCGGAGTGCTGCAGCAGGGTGGCGGCCATGCTTAAAGCTACTCCAAAATGCTTTTGTGCCATTCTCCTTTTTCCCAAGACTAGAAAACAAGGAGTTAACCCAGCAATTGGCCTTACTATCCCCAAACGCTGCAACATCAAAAACCGTCCCGCCGGCAAGAAATGTGGAAGTAAGCTC

Coding sequence (CDS)

ATGGCCTCCTCCAGAAGTACTTGCAAGGCTTTGGTTGTGGCGGCCGGCTTTCTGATTCTGGTGGCTTTCATTCACCCAGCCACGGCAGCCGGAGAGTGCGGGAAGATGACAATCGGGACAGCGGCGTATAGCCCGATATCGTGCACGGGGGCGGTGGCGGATGTGAAAGCTAAGGTCTCGCCGGAGTGCTGCAGCAGGGTGGCGGCCATGCTTAAAGCTACTCCAAAATGCTTTTGTGCCATTCTCCTTTTTCCCAAGACTAGAAAACAAGGAGTTAACCCAGCAATTGGCCTTACTATCCCCAAACGCTGCAACATCAAAAACCGTCCCGCCGGCAAGAAATGTGGAAGTAAGCTC

Protein sequence

MASSRSTCKALVVAAGFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVSPECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCGSKL

Homology

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BLAST of MC04g1036 vs. NCBI nr
Match: XP_022146368.1 (uncharacterized protein LOC111015596 [Momordica charantia])

HSP 1 Score: 231 bits (590), Expect = 1.86e-76
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVS 60
           MASSRSTCKALVVAAGFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVS
Sbjct: 1   MASSRSTCKALVVAAGFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVS 60

Query: 61  PECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCGS 117
           PECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG+
Sbjct: 61  PECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCGN 117

[Close]

BLAST of MC04g1036 vs. NCBI nr
Match: XP_022146338.1 (uncharacterized protein LOC111015576 [Momordica charantia])

HSP 1 Score: 212 bits (540), Expect = 8.95e-69
Identity = 110/119 (92.44%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVA---FIHPATAAGECGKMTIGTAAYSPISCTGAVADVKA 60
           MASS STCKALVVAAGFLILVA   FIHPA AAG CGKMTIG+AAYS ISCTGAVADVKA
Sbjct: 1   MASSNSTCKALVVAAGFLILVASEAFIHPAAAAGVCGKMTIGSAAYSLISCTGAVADVKA 60

Query: 61  KVSPECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 116
           KVSPECCSRVAAMLK TPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG
Sbjct: 61  KVSPECCSRVAAMLKTTPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 119

[Close]

BLAST of MC04g1036 vs. NCBI nr
Match: XP_022146313.1 (non-specific lipid transfer protein GPI-anchored 2-like [Momordica charantia])

HSP 1 Score: 155 bits (393), Expect = 2.26e-46
Identity = 80/119 (67.23%), Postives = 91/119 (76.47%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVA---FIHPATAAGECGKMTIGTAAYSPISCTGAVADVKA 60
           MAS  +T KAL+VAAG LILVA   FIH A AAGECGKMT+G AA S   C GAV DV+A
Sbjct: 1   MASFSTTSKALIVAAGLLILVASEGFIHRAGAAGECGKMTVGLAAVSLTPCLGAVKDVRA 60

Query: 61  KVSPECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 116
           KV+  CCS+VA M   TPKC CAILL P  ++ G+NPA+ +TIPKRCNIKNRPAGKKCG
Sbjct: 61  KVTAACCSKVAGMFNTTPKCLCAILLSPMAKQAGINPAVAITIPKRCNIKNRPAGKKCG 119

[Close]

BLAST of MC04g1036 vs. NCBI nr
Match: XP_022962902.1 (non-specific lipid transfer protein GPI-anchored 2 [Cucurbita moschata] >KAG6601904.1 hypothetical protein SDJN03_07137, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032603.1 hypothetical protein SDJN02_06652 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 136 bits (342), Expect = 1.26e-38
Identity = 73/119 (61.34%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVA---FIHPATAAGECGKMTIGTAAYSPISCTGAVADVKA 60
           MAS  S  K L+VA  F+ILVA   FI PA AAGECGK  + +AA     C  A  D +A
Sbjct: 1   MASFSSVSKPLIVAV-FVILVASEGFIAPAGAAGECGKTPVESAALGLTPCLAATRDARA 60

Query: 61  KVSPECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 116
           KVSP CCSRVAAM   +PKC CAILL P +++ G+NPAI +TIPKRCNI+NRPAGKKCG
Sbjct: 61  KVSPACCSRVAAMFNTSPKCLCAILLSPVSKQAGINPAIAITIPKRCNIRNRPAGKKCG 118

[Close]

BLAST of MC04g1036 vs. NCBI nr
Match: XP_023516114.1 (non-specific lipid transfer protein GPI-anchored 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134 bits (336), Expect = 1.03e-37
Identity = 72/119 (60.50%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVA---FIHPATAAGECGKMTIGTAAYSPISCTGAVADVKA 60
           MAS  S    L+VA  F+ILVA   FI PA AAGECGK  + +AA     C  A  D +A
Sbjct: 1   MASFSSVSTPLIVAV-FVILVASEGFIAPAGAAGECGKTPVESAALGLTPCLAATRDARA 60

Query: 61  KVSPECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 116
           KVSP CCSRVAAM   +PKC CAILL P +++ G+NPAI +TIPKRCNI+NRPAGKKCG
Sbjct: 61  KVSPACCSRVAAMFNTSPKCLCAILLSPVSKQAGINPAIAITIPKRCNIRNRPAGKKCG 118

[Close]

BLAST of MC04g1036 vs. ExPASy TrEMBL
Match: A0A6J1CYE3 (uncharacterized protein LOC111015596 OS=Momordica charantia OX=3673 GN=LOC111015596 PE=4 SV=1)

HSP 1 Score: 231 bits (590), Expect = 9.00e-77
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVS 60
           MASSRSTCKALVVAAGFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVS
Sbjct: 1   MASSRSTCKALVVAAGFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVS 60

Query: 61  PECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCGS 117
           PECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG+
Sbjct: 61  PECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCGN 117

[Close]

BLAST of MC04g1036 vs. ExPASy TrEMBL
Match: A0A6J1CYB6 (uncharacterized protein LOC111015576 OS=Momordica charantia OX=3673 GN=LOC111015576 PE=4 SV=1)

HSP 1 Score: 212 bits (540), Expect = 4.34e-69
Identity = 110/119 (92.44%), Postives = 111/119 (93.28%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVA---FIHPATAAGECGKMTIGTAAYSPISCTGAVADVKA 60
           MASS STCKALVVAAGFLILVA   FIHPA AAG CGKMTIG+AAYS ISCTGAVADVKA
Sbjct: 1   MASSNSTCKALVVAAGFLILVASEAFIHPAAAAGVCGKMTIGSAAYSLISCTGAVADVKA 60

Query: 61  KVSPECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 116
           KVSPECCSRVAAMLK TPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG
Sbjct: 61  KVSPECCSRVAAMLKTTPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 119

[Close]

BLAST of MC04g1036 vs. ExPASy TrEMBL
Match: A0A6J1CY97 (non-specific lipid transfer protein GPI-anchored 2-like OS=Momordica charantia OX=3673 GN=LOC111015552 PE=3 SV=1)

HSP 1 Score: 155 bits (393), Expect = 1.09e-46
Identity = 80/119 (67.23%), Postives = 91/119 (76.47%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVA---FIHPATAAGECGKMTIGTAAYSPISCTGAVADVKA 60
           MAS  +T KAL+VAAG LILVA   FIH A AAGECGKMT+G AA S   C GAV DV+A
Sbjct: 1   MASFSTTSKALIVAAGLLILVASEGFIHRAGAAGECGKMTVGLAAVSLTPCLGAVKDVRA 60

Query: 61  KVSPECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 116
           KV+  CCS+VA M   TPKC CAILL P  ++ G+NPA+ +TIPKRCNIKNRPAGKKCG
Sbjct: 61  KVTAACCSKVAGMFNTTPKCLCAILLSPMAKQAGINPAVAITIPKRCNIKNRPAGKKCG 119

[Close]

BLAST of MC04g1036 vs. ExPASy TrEMBL
Match: A0A6J1HDU2 (non-specific lipid transfer protein GPI-anchored 2 OS=Cucurbita moschata OX=3662 GN=LOC111463265 PE=4 SV=1)

HSP 1 Score: 136 bits (342), Expect = 6.12e-39
Identity = 73/119 (61.34%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVA---FIHPATAAGECGKMTIGTAAYSPISCTGAVADVKA 60
           MAS  S  K L+VA  F+ILVA   FI PA AAGECGK  + +AA     C  A  D +A
Sbjct: 1   MASFSSVSKPLIVAV-FVILVASEGFIAPAGAAGECGKTPVESAALGLTPCLAATRDARA 60

Query: 61  KVSPECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 116
           KVSP CCSRVAAM   +PKC CAILL P +++ G+NPAI +TIPKRCNI+NRPAGKKCG
Sbjct: 61  KVSPACCSRVAAMFNTSPKCLCAILLSPVSKQAGINPAIAITIPKRCNIRNRPAGKKCG 118

[Close]

BLAST of MC04g1036 vs. ExPASy TrEMBL
Match: A0A6J1JLA4 (non-specific lipid transfer protein GPI-anchored 2 OS=Cucurbita maxima OX=3661 GN=LOC111486908 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 1.47e-37
Identity = 70/119 (58.82%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 1   MASSRSTCKALVVAAGFLILVA---FIHPATAAGECGKMTIGTAAYSPISCTGAVADVKA 60
           MAS  S  K  ++ A F+ILVA   FI  A AAGECGK  + +AA     C  A  D +A
Sbjct: 1   MASFSSVSKPPLIVAVFVILVASEGFIARARAAGECGKTPVESAALGLTPCLAATRDARA 60

Query: 61  KVSPECCSRVAAMLKATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 116
           KVSP CCSRVAAM   +PKC CAILL P +++ G+NPAI +TIPKRCNI+NRPAGKKCG
Sbjct: 61  KVSPACCSRVAAMFNTSPKCLCAILLSPVSKQAGINPAIAITIPKRCNIRNRPAGKKCG 119

[Close]

BLAST of MC04g1036 vs. TAIR 10
Match: AT2G37870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 3.8e-23
Identity = 48/104 (46.15%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 13  VAAGFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVSPECCSRVAAMLK 72
           VA   + L+  +    AAGECG+M I  AA S   C  A  + + KV P CC++V A+++
Sbjct: 7   VAVALMSLLISLASVEAAGECGRMPINQAAASLSPCLPATKNPRGKVPPVCCAKVGALIR 66

Query: 73  ATPKCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCG 117
             P+C CA++L P  +K G+NP I + +PKRCNI+NRPAGK+CG
Sbjct: 67  TNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCG 110

[Close]

BLAST of MC04g1036 vs. TAIR 10
Match: AT5G05960.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 2.7e-16
Identity = 43/88 (48.86%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 30  AGECGKMTIGTAAYSPISCTGAVADVKAKVSPECCSRVAAMLKATPKCFCAILLFPKTRK 89
           AGECG+      A     C  A  D  AKVS  CC+RV  M    PKC CA++L    R 
Sbjct: 26  AGECGRNPPDREAIKLAPCAMAAQDTSAKVSAICCARVKQM-GQNPKCLCAVMLSSTARS 85

Query: 90  QGVNPAIGLTIPKRCNIKNRPAGKKCGS 118
            G  P I +TIPKRCNI NRP G KCG+
Sbjct: 86  SGAKPEISMTIPKRCNIANRPVGYKCGA 112

[Close]

BLAST of MC04g1036 vs. TAIR 10
Match: AT3G53980.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 41/102 (40.20%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 16  GFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVSPECCSRVAAMLKATP 75
           G ++L+  +     AGECG+ +    A     C GA  D  + V   CC+++       P
Sbjct: 12  GLILLIGTV--VDGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQI-KRFSQNP 71

Query: 76  KCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCGS 118
           KC CAILL    +  GV+P + LTIPKRCN  NRP G KCG+
Sbjct: 72  KCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGA 110

[Close]

BLAST of MC04g1036 vs. TAIR 10
Match: AT3G53980.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 41/102 (40.20%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 16  GFLILVAFIHPATAAGECGKMTIGTAAYSPISCTGAVADVKAKVSPECCSRVAAMLKATP 75
           G ++L+  +     AGECG+ +    A     C GA  D  + V   CC+++       P
Sbjct: 12  GLILLIGTV--VDGAGECGRSSPDNEAMKLAPCAGAAQDANSAVPGGCCTQI-KRFSQNP 71

Query: 76  KCFCAILLFPKTRKQGVNPAIGLTIPKRCNIKNRPAGKKCGS 118
           KC CAILL    +  GV+P + LTIPKRCN  NRP G KCG+
Sbjct: 72  KCLCAILLSDTAKASGVDPEVALTIPKRCNFANRPVGYKCGA 110

The following BLAST results are available for this feature:

BLAST of MC04g1036 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g1036 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146368.1	1.86e-76	99.15	uncharacterized protein LOC111015596 [Momordica charantia]	[more]
XP_022146338.1	8.95e-69	92.44	uncharacterized protein LOC111015576 [Momordica charantia]	[more]
XP_022146313.1	2.26e-46	67.23	non-specific lipid transfer protein GPI-anchored 2-like [Momordica charantia]	[more]
XP_022962902.1	1.26e-38	61.34	non-specific lipid transfer protein GPI-anchored 2 [Cucurbita moschata] >KAG6601...	[more]
XP_023516114.1	1.03e-37	60.50	non-specific lipid transfer protein GPI-anchored 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC04g1036 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYE3	9.00e-77	99.15	uncharacterized protein LOC111015596 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CYB6	4.34e-69	92.44	uncharacterized protein LOC111015576 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1CY97	1.09e-46	67.23	non-specific lipid transfer protein GPI-anchored 2-like OS=Momordica charantia O...	[more]
A0A6J1HDU2	6.12e-39	61.34	non-specific lipid transfer protein GPI-anchored 2 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JLA4	1.47e-37	58.82	non-specific lipid transfer protein GPI-anchored 2 OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of MC04g1036 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37870.1	3.8e-23	46.15	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G05960.1	2.7e-16	48.86	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G53980.1	2.3e-15	40.20	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G53980.2	2.3e-15	40.20	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 33..112 e-value: 5.7E-9 score: 37.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 39..110
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 40..115 e-value: 1.7E-12 score: 47.3
None	No IPR available	PANTHER	PTHR33122:SF13	NON-SPECIFIC LIPID-TRANSFER PROTEIN 4.1	coord: 6..117
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 47..106 e-value: 2.3142E-6 score: 40.1027
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 6..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1036.1	MC04g1036.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding