MC04g1001 (gene) Bitter gourd (Dali-11) v1

BLAST of MC04g1001 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1230.7 bits (3183), Expect = 0.0e+00
Identity = 643/1110 (57.93%), Postives = 802/1110 (72.25%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGKTI+++GF   V+AEEVK+FLE  TG GTV A+++ + +    R  +A VQF+SE   
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPR-VYAIVQFTSERHT 60

Query: 61   GHVVSQAAAEERLWYGSSYLKAREADRQ-NRRGGVGVERMENLTLHLGSQISKEKLSVIW 120
              +++  AA ERL+YG SYLKA E ++    +    +  +  L +  G Q+S +K   +W
Sbjct: 61   RLIIT--AAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLW 120

Query: 121  KRENCSVEFGSGVRKL---FVYVNLEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAP 180
              ++  V FG G+RKL   F +   +Y++E+ +E+I ++ L  P   +SKFL+IQ+  AP
Sbjct: 121  SAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAP 180

Query: 181  RIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQ 240
            +IF+K     +         FY   S  S  +WIR  DFT SSCIGQS A CLEL     
Sbjct: 181  KIFEKEDQPINLLFGIMD--FY---SDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLN 240

Query: 241  LPSFFKTLVGY-EEIYGPFNLETGSSFSSTSN-LVPIVTPPQGFDFSFKILFKINALVQH 300
            +P F +    Y E     F +E+GSS+SS +N LVP+V PP GF   F+ILFK+N LVQ+
Sbjct: 241  VPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQN 300

Query: 301  GYLPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQL 360
              L GP LD +F+RL++  ++    I+  LEKLF+L EC YEP  WL+ +Y  + +  +L
Sbjct: 301  ACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKL 360

Query: 361  PWKPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELD 420
            P  P ISLDDGLVY++RVQ+TP++VYF GPE N+SNRV+R YS  I+NF+RVSFVDE+L+
Sbjct: 361  PLSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLE 420

Query: 421  KIRSIDLSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFAS 480
            K+RS+DLSPR+ST    RT++YDRI S LR+GIVIGDKKFEFLAFS+SQLRENS WMFA 
Sbjct: 421  KVRSMDLSPRSSTQ--RRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAP 480

Query: 481  REGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNV 540
             + ++AA IR WMGDF  IRNVAKYAARLGQSF SSR+TL V   EIEVI DVE+ +   
Sbjct: 481  IDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGT 540

Query: 541  TYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSM 600
             Y FSDGIGKIS   A KVA +CGL   +PSAFQIRY GYKGVVA+DP S KKLSLRKSM
Sbjct: 541  RYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSM 600

Query: 601  LKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPS 660
             K++S +T+LDVLAWSKY PC++NRQ+I LLSTLG+ D VFEKKQ+E + +L+ IL  P 
Sbjct: 601  SKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPL 660

Query: 661  RALEVLELMSPGEMTSVLKEMLLY-YKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKG 720
             A E L LM+PGE T++LK ++L  YKP+ EPFL+MML+ FRA KLL+LRTK+RIF+  G
Sbjct: 661  EAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGG 720

Query: 721  RTMMGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDV 780
            R+MMGCLDET TL+YGQV VQ S P R     FI  G VVVAKNPCLHPGD+RVL AV+V
Sbjct: 721  RSMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLHPGDVRVLQAVNV 780

Query: 781  KALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQ 840
             AL+HMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCWD EL   R  +PM Y P PT  
Sbjct: 781  PALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQI 840

Query: 841  LDHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFP 900
            LDHDVTIEEV+EY ANY+VND LG IANAHT FAD+EP KA S  CI+LAK FS AVDFP
Sbjct: 841  LDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFP 900

Query: 901  KTGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVA 960
            KTGV A +P  L V E+PDFMEK D+P YESK VIGKLFR VK+ +    +I+++T +VA
Sbjct: 901  KTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVA 960

Query: 961  AKCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDK 1020
            +K YD DME+DGFE+Y++EAF  K  YD+KLGNLMDYYGI+TE E++SG I+R+ KSF K
Sbjct: 961  SKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTK 1020

Query: 1021 RTDMEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWG 1080
            R D E I  A+R+LRKE  + FN            + +E+ E AKASAWYHVTYH SYWG
Sbjct: 1021 RRDAESIGRAVRALRKETLSLFNA-----------SEEEENESAKASAWYHVTYHSSYWG 1080

Query: 1081 RYNEGMERDHFLSFPWCVSDKLIQIKKKKI 1104
             YNEG+ RDHFLSF WCV DKL++IKK  +
Sbjct: 1081 LYNEGLNRDHFLSFAWCVYDKLVRIKKTNL 1088

BLAST of MC04g1001 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 924.1 bits (2387), Expect = 1.5e-267
Identity = 456/728 (62.64%), Postives = 573/728 (78.71%), Query Frame = 0

Query: 377  SKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSIDLSPRTSTA-NGERTRV 436
            S VYF GPE N+SNRVVR +S DI+NF+R+SFVDE+ +K+R+ DLSPR+++  +  RT +
Sbjct: 7    STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTAL 66

Query: 437  YDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSAADIREWMGDFRQIRN 496
            Y R+LS L +GI IG K FEFLAFS+SQLR+NS WMFASR+GL+A+DIR WMGDFR IRN
Sbjct: 67   YKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRN 126

Query: 497  VAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVTYCFSDGIGKISETLAEKVAE 556
            VAKYAARLGQSF SS +TL V+++E+E I+D++   N   + FSDGIGKIS   A +VA 
Sbjct: 127  VAKYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEVAM 186

Query: 557  RCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYKSLDTQLDVLAWSKYLPC 616
            +C L    PSAFQIRY GYKGVVA+DPTS  KLSLRKSMLK++S +  +DVLA+SKY P 
Sbjct: 187  KCNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPG 246

Query: 617  FLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVLELMSPGEMTSVLKEM 676
            FLNRQ+I LLSTLG++D VFE+KQ+EA+ QLN ++ DP  A+E +ELM  GE+T+ +KE+
Sbjct: 247  FLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKEL 306

Query: 677  LLY-YKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCLDETGTLKYGQVFVQ 736
            LL  Y+P+ EP+L+M+L+TFRA KLL+L+TKSRI +PKGR MMGCLDET TLKYGQVF++
Sbjct: 307  LLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIR 366

Query: 737  CSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMVDCVVFPQKGQRPHP 796
             +  G +    F   GKVV+AKNPCLHPGD+R+L+AVDV  LHHM +CVVFPQ+G RPHP
Sbjct: 367  -ATSGVNDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVVFPQQGPRPHP 426

Query: 797  NECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTIEEVQEYMANYMVND 856
            NECSGSDLDGD+YFV WDP L   R V PM Y PAPT  LDHDVTIEEV+EY  NY+VN+
Sbjct: 427  NECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVEEYFTNYIVNE 486

Query: 857  GLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPANLPPFLRVHEFPDFM 916
             LG IANAH VFAD+E  KA S+ CI+LAKLFSIAVDFPKTGVPA +PP L V E+PDFM
Sbjct: 487  SLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPELHVKEYPDFM 546

Query: 917  EKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPDMEIDGFEKYLNEAF 976
            EKLD+  YESKGVIGKL+R +K    +T  I+ +TREVA + YD DM +DG+E Y+ EA 
Sbjct: 547  EKLDKVTYESKGVIGKLYREIKK---HTPHIKHFTREVARRSYDTDMIVDGYEDYITEAM 606

Query: 977  DFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRTDMEQISHAMRSLRKEARAW 1036
              K  YD+KLGNLMD+YGI++E E++SG IL++ K+F K++D + I  A+RSLRKEAR+ 
Sbjct: 607  ALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAVRSLRKEARSR 666

Query: 1037 FNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGMERDHFLSFPWCVSDK 1096
            F+E       DD+ +G +  E AKASAWYHVTYH  +WG YNEG ER HF+SFPWC+ +K
Sbjct: 667  FSEMS----LDDNGHGHDASE-AKASAWYHVTYHPEFWGCYNEGYERPHFISFPWCIYEK 722

Query: 1097 LIQIKKKK 1103
            L++IK+++
Sbjct: 727  LLRIKQRR 722

BLAST of MC04g1001 vs. ExPASy Swiss-Prot
Match: O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 2.2e-210
Identity = 447/1140 (39.21%), Postives = 657/1140 (57.63%), Query Frame = 0

Query: 4    TIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAAGHV 63
            T++I    + + A+E+  FLE H G+ TV A+ I   RD      FA VQF++ L     
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTT-LEVKSR 70

Query: 64   VSQAAAEERLWYGSSYLKAREA-DRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWKRE 123
                +++ +L + +  L+  EA D    R     +R++++ L +G   S EK        
Sbjct: 71   AQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEK-------R 130

Query: 124  NCSVEFGSGVR----------KLFVYVNLE-YKMEVWFESILRVQLRCPPDGASKF--LL 183
             C++E   GVR          + +V+ + + YK+EV FE I+     C    AS+    L
Sbjct: 131  FCALEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFL 190

Query: 184  IQLQRAPRIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCL 243
            ++L+  P++FK+ +   ++   S   RF     +     WIR  DF+ S  IG S   CL
Sbjct: 191  LKLKYGPKVFKRVTVHIATKFKSDRYRFC---KEDFDFMWIRTTDFSGSKSIGTSTCFCL 250

Query: 244  ELSPGDQLPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPP-QGFDFSFKILFKI 303
            E+  G  +   F  L  Y E         G +F+S + +VP++     G +F ++ILF++
Sbjct: 251  EVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQL 310

Query: 304  NALVQHGYLP-GPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLS 363
            NALV    +      D E  +++         +   L+KL       Y+P  ++K Q  S
Sbjct: 311  NALVHAQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQS 370

Query: 364  YYNSKQLPWKPDIS----LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNF 423
                K++   P  +     +  ++   R  +TPSK+Y  GPE   +N VV+ +++ + +F
Sbjct: 371  VV--KKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDF 430

Query: 424  IRVSFVDEELDKIRSIDLSPRTST---ANGERTRVYDRILSTLRNGIVIGDKKFEFLAFS 483
            +RV+FV+E+  K+ +  LS  +         RT +Y+R+LS L  GI +G K+FEFLAFS
Sbjct: 431  MRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFS 490

Query: 484  ASQLRENSVWMFASREGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHE 543
            ASQLR NSVWMFAS E + A DIREWMG FR+IR+++K AAR+GQ F +SR+TL V   +
Sbjct: 491  ASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQD 550

Query: 544  IEVITDVEVETNNVTYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAI 603
            +E I D+EV T+   YCFSDGIGKIS   A++VA++CGL +H PSAFQIRY GYKGV+A+
Sbjct: 551  VEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAV 610

Query: 604  DPTSEKKLSLRKSMLKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQK 663
            D +S +KLSLR SMLK+ S +  L+V  W++ +PCFLNR++I LLSTLGI+D +FE  Q 
Sbjct: 611  DRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQA 670

Query: 664  EAIYQLNCILKDPSRALEVLELMSPGEMTSVLKEMLLY-YKPNKEPFLNMMLRTFRADKL 723
              +  L  +L+D   AL VL+ +S     ++L +MLL  Y P+ EP+L+MMLR     +L
Sbjct: 671  VHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQL 730

Query: 724  LDLRTKSRIFVPKGRTMMGCLDETGTLKYGQVFVQCSVP------------GRSSESNFI 783
             +L+++ RI VPKGR ++GC+DE G L+YGQV+V+ ++              +  E   +
Sbjct: 731  SELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSV 790

Query: 784  PEGKVVVAKNPCLHPGDMRVLNAVDVKALHH--MVDCVVFPQKGQRPHPNECSGSDLDGD 843
              GKVVV KNPCLHPGD+RVL+A+          +DC++FPQKG+RPHPNECSG DLDGD
Sbjct: 791  VIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGD 850

Query: 844  LYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTIEEVQEYMANYMVNDGLGAIANAHTV 903
             +FV WD ++       PM Y  +    +DHDVT+EE+ ++  +YM++D LG I+ AH V
Sbjct: 851  QFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLV 910

Query: 904  FADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPANLPPFLRVHEFPDFMEKLDRPAYESK 963
             ADR+P KA S KC++LA L S AVDF KTG PA +P  L+  EFPDF+E+ ++P Y S+
Sbjct: 911  HADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISE 970

Query: 964  GVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPDMEIDGFEKYLNEAFDFKTRYDYKLG 1023
             V GKL+R+VK  S      E  + +  A  YD  +E  GFE ++  A   +  Y  KL 
Sbjct: 971  SVFGKLYRAVKS-SLAQRKPEAESEDTVA--YDVTLEEAGFESFIETAKAHRDMYGEKLT 1030

Query: 1024 NLMDYYGIRTEPELVSGNILRVGKSFDKRTD------MEQISHAMRSLRKEARAWFNEKG 1083
            +LM YYG   E E+++G IL+  + +  R +       ++I+ +++ L KEA  WF +  
Sbjct: 1031 SLMIYYGAANEEEILTG-ILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKS- 1090

Query: 1084 SKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGMERDHFLSFPWCVSDKLIQIK 1100
                C+     DE ++   ASAWY+VTY+       N   E+  FLSFPW V D L+ IK
Sbjct: 1091 ----CE-----DEQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIK 1114

BLAST of MC04g1001 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 8.7e-199
Identity = 418/1087 (38.45%), Postives = 625/1087 (57.50%), Query Frame = 0

Query: 51   TVQFSSELAAGHVVSQAAAEERLWYGSSYLKA---------READRQNRRGGVGVERMEN 110
            TVQF S  AA      A++     +  + L           R +D   R  G G      
Sbjct: 59   TVQFGSAAAAAAAAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAG------ 118

Query: 111  LTLHLGSQISKEKLSVIWKRENCSVEFGSGVRKLFVYV---NLEYKMEVWFESILRVQLR 170
              L +G ++++         +    E   G R++ +Y+   +  YK+EV FE  ++  L 
Sbjct: 119  --LVVGDRVAERVFEAADAWDGVRAEVIPGKRRVDLYLEHDSQRYKLEVLFED-MKDCLG 178

Query: 171  CPPDGASKFLLIQLQRAPRIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPS 230
            C  DG    +L+QL  APRI   + S  + +S     RF+  +  +  S W+R +DFTP+
Sbjct: 179  CTLDGMGA-ILLQLNYAPRI-HTAISGPAVNSRFMDDRFHACKEDAKFS-WVRALDFTPN 238

Query: 231  SCIGQSFALCLELSPGDQLPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGF 290
               G+   L L+L     +    K+L  +    G   + +     ++SN+VP+V  P+ +
Sbjct: 239  YSFGRCSTLVLKLGKSALVSDILKSL-PFSGNLGELTMNSMDGVGASSNVVPLVHCPRDY 298

Query: 291  DFSFKILFKINALVQHGYLPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQ 350
               +++LF++N+L+  G +    ++ + F+ +       +   R  EK+  L+   Y P 
Sbjct: 299  SVPYEVLFRLNSLMHMGKIVAKHVNADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPL 358

Query: 351  KWLKQQYLSYYNSKQ--LPWKPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQY 410
            ++++Q+  S   S    L  + +   +  L+  +RV ITPSK++  GPE  ++N VV+ +
Sbjct: 359  QFIQQEAYSMKRSHNVLLSNEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHH 418

Query: 411  SDDIDNFIRVSFVDEELDKIRSIDLSPRTST---ANGERTRVYDRILSTLRNGIVIGDKK 470
            S    +F+RV+FVDE+  K+ S  +S R      +   +T +Y RILS L+ G  IG K 
Sbjct: 419  SAYASDFVRVTFVDEDWSKLSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKN 478

Query: 471  FEFLAFSASQLRENSVWMFASREGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKT 530
            FEFLAFSASQLR NSVWMFAS   L+A  IR WMG F  IR+V+K AAR+GQ F SSR+T
Sbjct: 479  FEFLAFSASQLRGNSVWMFASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQT 538

Query: 531  LCVEEHEIEVITDVEVETNNVTYCFSDGIGKISETLAEKVAERCGL-INHTPSAFQIRYA 590
              V   ++EVI D+E+ T+   Y FSDGIGKIS   A++VA   GL   + PSAFQIRY 
Sbjct: 539  FEVLRWDVEVIPDIEITTDGSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYG 598

Query: 591  GYKGVVAIDPTSEKKLSLRKSMLKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKD 650
            GYKGV+AIDP S   LSLR SM K++S    L++ +WSK  PC++NR++I+LLSTLGI+D
Sbjct: 599  GYKGVIAIDPMSSIDLSLRPSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRD 658

Query: 651  RVFEKKQKEAIYQLNCILKDPSRALEVLELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLR 710
             +F   Q++ + +   +L +   AL VL  +   E  + +K +L  Y+P+ EP+L+M+L+
Sbjct: 659  EIFVAMQQDEMRETEEMLTNKEVALSVLGKLGGSETKTAVKMLLQGYEPSSEPYLSMILK 718

Query: 711  TFRADKLLDLRTKSRIFVPKGRTMMGCLDETGTLKYGQVFVQCSVPGR----SSESNFIP 770
              + ++L D+RT+ +I VPKGR ++GCLDETG L+YGQV+++ +   +    S++S F  
Sbjct: 719  AHQENRLTDIRTRCKIHVPKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYN 778

Query: 771  E--------GKVVVAKNPCLHPGDMRVLNAVDVKALHHMVDCVVFPQKGQRPHPNECSGS 830
            +        GKV + KNPCLHPGD+RVL A+    L  MVDC+VFPQ+G+RPHPNECSG 
Sbjct: 779  DDGKTATVVGKVAITKNPCLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGG 838

Query: 831  DLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTIEEVQEYMANYMVNDGLGAIA 890
            DLDGDLYF+ WD +L   +   PM Y       +DH VT+EE+Q++  +YM+ND LGAI+
Sbjct: 839  DLDGDLYFITWDDKLIPEKVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAIS 898

Query: 891  NAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPANLPPFLRVHEFPDFMEKLDRP 950
             AH + ADR P KA S +C++LA L S+AVDF KTG PA +P  LR  E+PDFME+ ++P
Sbjct: 899  TAHLIHADRSPLKARSPECLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKP 958

Query: 951  AYESKGVIGKLFRSV---KDVSFNTNTIETYTREVAAKCYDPDMEIDGFEKYLNEAFDFK 1010
             Y S GV+GKL+RS     + S ++  + + + +  +  YDPD+E+ G +++L  A ++ 
Sbjct: 959  MYISNGVLGKLYRSAMGHMEKSGDSGALSSSSAQ-PSPTYDPDLEVPGSDEFLQAAEEYY 1018

Query: 1011 TRYDYKLGNLMDYYGIRTEPELVSGNI----LRVGKSFDKRTDM-EQISHAMRSLRKEAR 1070
              Y+ KL  LM+YY    E E+++GNI    L + +   +  +M ++I  A+ +L +EAR
Sbjct: 1019 ELYEEKLTTLMNYYRAELEDEILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREAR 1078

Query: 1071 AWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGMERDHFLSFPWCVS 1100
             W              +  E++    ASAWY VTYH        +      F SFPW   
Sbjct: 1079 GWLL-----------SSRKEEDASRMASAWYRVTYHP-------DRRRGKRFWSFPWIAC 1111

BLAST of MC04g1001 vs. ExPASy Swiss-Prot
Match: Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.8e-159
Identity = 383/1068 (35.86%), Postives = 566/1068 (53.00%), Query Frame = 0

Query: 98   RMENLTLHLGSQISKEKLSVIWKRENC-----------------SVEFGSGVRKLFVYVN 157
            ++  +TL +G+ +S++   V W+ E                   S  F      +   +N
Sbjct: 131  KLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVIN 190

Query: 158  LEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAPRIFKKSSSSSSSSSSSSSSRFYFK 217
             +YK+E+    I  V+      G    L++QL  +PR++ +++      +          
Sbjct: 191  CDYKLELLVRDIQTVRQYKTLHGF--VLILQLASSPRVWYRTADDDIYDTVPG------- 250

Query: 218  ESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQ------LPSFFKTLVGYEEIYGPF 277
            +       WIR  DFT    IG+  +  + +SP  +      L  F    V  E +  P 
Sbjct: 251  DLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPP 310

Query: 278  NLETGSSFSS-TSNLVPIVTPPQGFDFSFKILFKINALVQHGYLPGPLLDDEFFRLVDPS 337
             +     F    S+    +   +G   SF+I+F +N+++  G      L + FF L+   
Sbjct: 311  RIRNEPCFGEPVSDHFFCIHHKEG--ISFEIMFLVNSVLHRGVFNQFQLTERFFDLL--- 370

Query: 338  RFRPEYIERA-LEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPWKPDISLDDGLVYVHRV 397
            R +P+ +  A L+ L   K   ++  K LK        + +L    + S D  +  + R+
Sbjct: 371  RNQPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSED--ISEIRRL 430

Query: 398  QITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSIDLS--------PR 457
             ITP++ Y   PE  LSNRV+R+Y    + F+RV+F+DE +  I S  LS          
Sbjct: 431  VITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDL 490

Query: 458  TSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSAADIR 517
            TS++  ++T V+ R+ S L +G  +  +K+ FLAFSA+QLR+ S W FA       +DI+
Sbjct: 491  TSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIK 550

Query: 518  EWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDV-EVETNNVTYCFSDGIG 577
             WMG F+  +NVAK AAR+G  F S+  T+ V  HE++  T+V ++E N   Y FSDGIG
Sbjct: 551  TWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVD--TEVPDIERNG--YVFSDGIG 610

Query: 578  KISETLAEKVAERCGL-INHTPSAFQIRYAGYKGVVAIDPTSEK--KLSLRKSMLKYKSL 637
             I+  LA++V E+  L ++++P A+QIRYAG+KGVVA  P+     +L+LR SM K+ S 
Sbjct: 611  TITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSK 670

Query: 638  DTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVL 697
             T L++ +W+++ P FLNRQ+I LLS LG+ D +F   Q+  +Y+LN IL D   A EVL
Sbjct: 671  HTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVL 730

Query: 698  ELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL 757
                  +  +    +   +KP  EP L  ML + R  +L  LR KSRIFV  GR +MGCL
Sbjct: 731  TASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCL 790

Query: 758  DETGTLKYGQVFVQCSVP----------GRSSESNF---IPEGKVVVAKNPCLHPGDMRV 817
            DE G L++GQ F+Q S P           R  E+     + +G V +AKNPCLHPGD+R+
Sbjct: 791  DEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRI 850

Query: 818  LNAVDVKALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVK----P 877
            L AVDV  LHHM DC++FPQKG RPH NE SGSDLDGDLYFV WD +L  I P +     
Sbjct: 851  LEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKL--IPPNRKSYPA 910

Query: 878  MSYKPAPTIQLDHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLA 937
            M Y  A    L   V  +++ ++ A  + N+ LG I NAH V ADR    AM  +C+ LA
Sbjct: 911  MHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLA 970

Query: 938  KLFSIAVDFPKTGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDV-SFNT 997
            +L + AVDFPKTG   ++P  L+   +PDFM K D   Y+S  ++G+L+R VK+V   + 
Sbjct: 971  ELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDA 1030

Query: 998  NTIETYTREVAAKCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSG 1057
                  + + +A  YD  +EI GFE  + EA+  K  YD +L  L+  Y ++ E E+V+G
Sbjct: 1031 EASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTG 1090

Query: 1058 NILRVGKSFDKRTD--MEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEE----F 1100
            +I  + K   K+     E++ H+  SL+KE R  F E        D +N  E+E+     
Sbjct: 1091 HIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEE-----TIPDHENLSEEEKNILYE 1150

BLAST of MC04g1001 vs. NCBI nr
Match: XP_022146462.1 (probable RNA-dependent RNA polymerase 1 [Momordica charantia])

HSP 1 Score: 2234 bits (5788), Expect = 0.0
Identity = 1110/1111 (99.91%), Postives = 1110/1111 (99.91%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA
Sbjct: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60

Query: 61   GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWK 120
            GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWK
Sbjct: 61   GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWK 120

Query: 121  RENCSVEFGSGVRKLFVYVNLEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAPRIFK 180
             ENCSVEFGSGVRKLFVYVNLEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAPRIFK
Sbjct: 121  GENCSVEFGSGVRKLFVYVNLEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAPRIFK 180

Query: 181  KSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQLPSF 240
            KSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQLPSF
Sbjct: 181  KSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQLPSF 240

Query: 241  FKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQHGYLPGP 300
            FKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQHGYLPGP
Sbjct: 241  FKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQHGYLPGP 300

Query: 301  LLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPWKPDI 360
            LLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPWKPDI
Sbjct: 301  LLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPWKPDI 360

Query: 361  SLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSID 420
            SLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSID
Sbjct: 361  SLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSID 420

Query: 421  LSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSA 480
            LSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSA
Sbjct: 421  LSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSA 480

Query: 481  ADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVTYCFSD 540
            ADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVTYCFSD
Sbjct: 481  ADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVTYCFSD 540

Query: 541  GIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYKSL 600
            GIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYKSL
Sbjct: 541  GIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYKSL 600

Query: 601  DTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVL 660
            DTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVL
Sbjct: 601  DTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVL 660

Query: 661  ELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL 720
            ELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL
Sbjct: 661  ELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL 720

Query: 721  DETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMV 780
            DETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMV
Sbjct: 721  DETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMV 780

Query: 781  DCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTI 840
            DCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTI
Sbjct: 781  DCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTI 840

Query: 841  EEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPAN 900
            EEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPAN
Sbjct: 841  EEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPAN 900

Query: 901  LPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPD 960
            LPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPD
Sbjct: 901  LPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPD 960

Query: 961  MEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRTDMEQI 1020
            MEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRTDMEQI
Sbjct: 961  MEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRTDMEQI 1020

Query: 1021 SHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGME 1080
            SHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGME
Sbjct: 1021 SHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGME 1080

Query: 1081 RDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111
            RDHFLSFPWCVSDKLIQIKKKKICQENSSPI
Sbjct: 1081 RDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111

BLAST of MC04g1001 vs. NCBI nr
Match: XP_038875555.1 (probable RNA-dependent RNA polymerase 1 [Benincasa hispida])

HSP 1 Score: 1781 bits (4614), Expect = 0.0
Identity = 885/1116 (79.30%), Postives = 990/1116 (88.71%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGKTIEIYGFR +VT +EVKEFLENHTGDGTV  VRI++ +DE +RFTF TV+F SELAA
Sbjct: 1    MGKTIEIYGFRPEVTVDEVKEFLENHTGDGTVLTVRISKPKDEKTRFTFVTVRFKSELAA 60

Query: 61   GHVVSQA-AAEERLWYGSSYLKAREADRQN-RRGGVGVERMENLTLHLGSQISKEKLSVI 120
             ++V +A AAE++LW+GSSYLKARE +R +  RGG  +ERME++  HLGS ISK+K+ VI
Sbjct: 61   EYIVEKATAAEKKLWFGSSYLKAREVERASPARGGGEMERMEDVKGHLGSLISKDKMRVI 120

Query: 121  WKRENCSVEFGSGVRKLFVYVN--LEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAP 180
            W+ EN +VEFG GVRKL  Y++  +EYKME+ FE+IL V+ RCP +  SKF LIQLQ AP
Sbjct: 121  WEGENWNVEFGIGVRKLSFYLSYEVEYKMELAFENILGVEFRCPLNQPSKFFLIQLQGAP 180

Query: 181  RIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQ 240
            RIFKKS SSSSS  +S+   F F        RWIRDVDFTPSSCIGQSFALCLELSPG  
Sbjct: 181  RIFKKSRSSSSSRLNSN--EFCF--------RWIRDVDFTPSSCIGQSFALCLELSPGHH 240

Query: 241  LPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQHGY 300
            LP FF+ LVGY+E Y PF L+TGSSFSS SNLVPI+TPP+GFD S+K LFKINALVQHGY
Sbjct: 241  LPPFFQNLVGYKETYAPFILQTGSSFSSISNLVPIITPPRGFDISYKTLFKINALVQHGY 300

Query: 301  LPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPW 360
            LPGP LDDEFFRLVD SRFRP+Y+E ALEK+FNLKEC YEPQKWLK  YLS+Y S QLPW
Sbjct: 301  LPGPTLDDEFFRLVDSSRFRPDYVEHALEKMFNLKECCYEPQKWLKHHYLSFYTSNQLPW 360

Query: 361  KPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKI 420
            KP+ISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVR++ DDIDNF+RVSFVDE+LDK+
Sbjct: 361  KPNISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEDLDKL 420

Query: 421  RSIDLSPRTSTA-NGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASR 480
             SIDL+PR+S+A N ERTRVYDRILS LRNGIVIGDKKFEFLAFSASQLRENS WMFASR
Sbjct: 421  HSIDLAPRSSSAGNSERTRVYDRILSVLRNGIVIGDKKFEFLAFSASQLRENSFWMFASR 480

Query: 481  EGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVT 540
            EGLSAADIREWMGDFR+IRNVAKYAARLGQSFGSSRKTLCVEEHE EVI DVEVE     
Sbjct: 481  EGLSAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEEHEFEVIPDVEVERKKTK 540

Query: 541  YCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSML 600
            YCFSDGIGKIS+TLAEKVAE+CGLI+HTPSAFQIRYAGYKGVVAIDPT +KKLSLRKSML
Sbjct: 541  YCFSDGIGKISKTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTLKKKLSLRKSML 600

Query: 601  KYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSR 660
            KY SLDTQLDVL WSKY PCFLNRQVINLLSTLGIKDRVF KKQKEAI QL+ IL+DPS+
Sbjct: 601  KYMSLDTQLDVLLWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPSK 660

Query: 661  ALEVLELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRT 720
            ALEVLELMSPGEMT +LKE+LL+YKPN+EPFLNMMLRTFRADK LDLRTKSRIFVPKGRT
Sbjct: 661  ALEVLELMSPGEMTGILKELLLFYKPNEEPFLNMMLRTFRADKFLDLRTKSRIFVPKGRT 720

Query: 721  MMGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKA 780
            MMGCLDET TL+YGQVFV CS+PGRS+ESNF+ +GKVVVAKNPCLHPGD+RVL+AVDVKA
Sbjct: 721  MMGCLDETRTLEYGQVFVHCSIPGRSNESNFVIKGKVVVAKNPCLHPGDVRVLDAVDVKA 780

Query: 781  LHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLD 840
            LHHMVDCVVFPQKG+RPHPNECSGSDLDGDLYFVCWDPEL CI+PVKPMSY+PAPT+QLD
Sbjct: 781  LHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIKPVKPMSYEPAPTMQLD 840

Query: 841  HDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKT 900
            HDVTIEEVQEY+ANYMVNDGLGAIANAHTVFAD+ P+KAMS +CIKLAKLFSIAVDFPKT
Sbjct: 841  HDVTIEEVQEYLANYMVNDGLGAIANAHTVFADKNPKKAMSTECIKLAKLFSIAVDFPKT 900

Query: 901  GVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAK 960
            GVPANLP  LRVHE+PDFM+K ++P Y S GV+GKLF+ VKDVS + NT+E +TREVA  
Sbjct: 901  GVPANLPRNLRVHEYPDFMDKPNKPTYASNGVLGKLFQGVKDVSSDVNTLEIFTREVAIN 960

Query: 961  CYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRT 1020
            CYDPDME+DGF+KYL+EAFD+KTRYD+KLGNLMDYYGI+TEPELVSGNILR+ KSFDKR 
Sbjct: 961  CYDPDMEVDGFDKYLSEAFDYKTRYDFKLGNLMDYYGIKTEPELVSGNILRMAKSFDKRN 1020

Query: 1021 DMEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRY 1080
            D+EQI+ AM+SLRKEARAWFNEKGSK   D+     E+EE+AKASAWYHVTYH  YWGRY
Sbjct: 1021 DLEQITFAMKSLRKEARAWFNEKGSKSTYDNSKG--EEEEYAKASAWYHVTYHPDYWGRY 1080

Query: 1081 NEGMERDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111
            NEGM+RDHFLSFPWCV+DKLIQIK++K    +SSP+
Sbjct: 1081 NEGMQRDHFLSFPWCVADKLIQIKREKTLLMSSSPM 1104

BLAST of MC04g1001 vs. NCBI nr
Match: XP_022994004.1 (probable RNA-dependent RNA polymerase 1 [Cucurbita maxima])

HSP 1 Score: 1773 bits (4591), Expect = 0.0
Identity = 882/1122 (78.61%), Postives = 985/1122 (87.79%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGK IEIYGF  +VTA+EVKEF+ENHTGDGTV  VRI++  DE +RFTFATV+F+S+L  
Sbjct: 7    MGKMIEIYGFPAEVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRFTSKLGG 66

Query: 61   GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGV--------GVERMENLTLHLGSQISK 120
             +VV+QAAAE+RLW+GSSYLKAR+ +R+ R            G+ERMEN+ +  GS +SK
Sbjct: 67   EYVVAQAAAEKRLWFGSSYLKARKVEREIRTATAAAAARVHGGLERMENVNVQWGSLVSK 126

Query: 121  EKLSVIWKRENCSVEFGSGVRKLFVYVN---LEYKMEVWFESILRVQLRCPPDGASKFLL 180
            EK+ VIWK    SVE+G G RKL  Y++   +EYKME+ FE+IL VQLRC  D  S+  L
Sbjct: 127  EKMKVIWKEGKWSVEYGIGARKLGFYLSYEGVEYKMELCFENILGVQLRCSGDRGSELFL 186

Query: 181  IQLQRAPRIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCL 240
            IQLQ APRIFKK+ SSSSS  SS          +S+G RWIRDVDFTPSSCIGQSFALCL
Sbjct: 187  IQLQGAPRIFKKTPSSSSSRLSSE---------ESTGFRWIRDVDFTPSSCIGQSFALCL 246

Query: 241  ELSPGDQLPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKIN 300
            ELSPGDQLPSFF+TLVGY+E Y PF L  GSS SS SNLVPI+TPPQGFD S+KILFKIN
Sbjct: 247  ELSPGDQLPSFFRTLVGYKESYAPFILHPGSSLSSISNLVPIITPPQGFDISYKILFKIN 306

Query: 301  ALVQHGYLPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYY 360
            AL+QHGYLPGP LD+EFFRLVD SRFRPEYIE ALEKLF+ KEC YEPQKWLKQQYLS+Y
Sbjct: 307  ALLQHGYLPGPALDNEFFRLVDSSRFRPEYIEYALEKLFHFKECCYEPQKWLKQQYLSFY 366

Query: 361  NSKQLPWKPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFV 420
            +SKQLP KP++SLDDGLVYVHRVQITP+KVYFRGPEANLSNRVVR + DD+DNF+RVSFV
Sbjct: 367  SSKQLPCKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFV 426

Query: 421  DEELDKIRSIDLSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSV 480
            DEELDK+ SIDLSPRTS  N  RTRVYDR+LS LRNGIVIGDKKFEFLAFSASQLRENS 
Sbjct: 427  DEELDKLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSC 486

Query: 481  WMFASREGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEV 540
            WMFASR+GLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSR+TLCVE+HEIEVI DVEV
Sbjct: 487  WMFASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVIPDVEV 546

Query: 541  ETNNVTYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLS 600
            ETN +TYCFSDGIGKIS TLAEKVAE+CGLI+HTPSAFQIRYAGYKGVVAIDPTS KKLS
Sbjct: 547  ETNKITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLS 606

Query: 601  LRKSMLKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCI 660
            LRKSMLKY SLDTQ+DVL+WSKY PCFLNRQVINLLSTLGIKDRVF KKQKEAI QL+ I
Sbjct: 607  LRKSMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSI 666

Query: 661  LKDPSRALEVLELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIF 720
            L+DPSRALEVLELMSPGEMTS+LKE+LL YKPN+EPFLNMMLRTFRA KLLDLRTKSRIF
Sbjct: 667  LEDPSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIF 726

Query: 721  VPKGRTMMGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLN 780
            VPKGRTMMGCLDET TL+YGQVFV CS+PGRSSESNF+ +GKVVVAKNPCLHPGD+R+L+
Sbjct: 727  VPKGRTMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLD 786

Query: 781  AVDVKALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPA 840
            AVDVKALHHMV+CVVFPQKG+RPHPNECSGSDLDGDLYFV WDPEL  I+PVKPMSY+PA
Sbjct: 787  AVDVKALHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPA 846

Query: 841  PTIQLDHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIA 900
            PT++LDHDVTIEEVQEY+A YMVNDGLG IANAHTVFAD++P+KAM+A+CIKLAKLFSIA
Sbjct: 847  PTMRLDHDVTIEEVQEYLAKYMVNDGLGGIANAHTVFADKKPKKAMTAECIKLAKLFSIA 906

Query: 901  VDFPKTGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYT 960
            VDFPKTGVPAN P  LRV E+PDFMEK D+P Y S GV+GKLFR VKDVS + NTIE ++
Sbjct: 907  VDFPKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTIEIFS 966

Query: 961  REVAAKCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGK 1020
            REVA KCYDPDME+DGFE YL+EAF++K RYD+KLGNLMDYYGI+TEPEL+SGNILR+ K
Sbjct: 967  REVATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAK 1026

Query: 1021 SFDKRTDMEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQ 1080
            SFDKR D+EQIS A++SLRKEAR+WFNEKGSK  CD+DD    DEE+AKASAWY VTYH 
Sbjct: 1027 SFDKRNDLEQISLAIKSLRKEARSWFNEKGSKSACDEDDK---DEEYAKASAWYRVTYHP 1086

Query: 1081 SYWGRYNEGMERDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111
             YWGRYNEGM+RDHFLSFPWCVSDKLIQIK++K C  N SPI
Sbjct: 1087 DYWGRYNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVNLSPI 1116

BLAST of MC04g1001 vs. NCBI nr
Match: XP_022938807.1 (probable RNA-dependent RNA polymerase 1 [Cucurbita moschata])

HSP 1 Score: 1770 bits (4585), Expect = 0.0
Identity = 880/1117 (78.78%), Postives = 985/1117 (88.18%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGKTIEIYGF   VTA+EVKEF+ENHTGDGTV  VRI++  DE +RFTFATVQF+S+L  
Sbjct: 7    MGKTIEIYGFPTQVTADEVKEFIENHTGDGTVLTVRISKLNDEKARFTFATVQFTSKLGG 66

Query: 61   GHVVSQAAAEERLWYGSSYLKAREADRQNR---RGGVGVERMENLTLHLGSQISKEKLSV 120
             +VV+QAAAE+RLW+GSSYLKAR+ +R+ +   R    +ERMEN+ +  GS +SKE++ V
Sbjct: 67   EYVVAQAAAEKRLWFGSSYLKARKVEREIKTAARVHGELERMENVNVQWGSLVSKEEMKV 126

Query: 121  IWKRENCSVEFGSGVRKLFVYVN---LEYKMEVWFESILRVQLRCPPDGASKFLLIQLQR 180
            IWK    SVE+G GVRKL  Y++   +EYKME+ FE+IL VQLRC  D  SK  LIQLQ 
Sbjct: 127  IWKGGKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGVQLRCSVDRGSKLFLIQLQG 186

Query: 181  APRIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPG 240
            APRIFKK+  SSSS  SS          +S+G RWIRDVDFTPSSCIGQSFALCLELS G
Sbjct: 187  APRIFKKAPLSSSSRLSSE---------ESTGFRWIRDVDFTPSSCIGQSFALCLELSHG 246

Query: 241  DQLPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQH 300
            DQLPSFF+TLVGY+E Y PF L+TGSS SS SNLVPI+TPPQGFD  +KILFKINAL+QH
Sbjct: 247  DQLPSFFQTLVGYKESYAPFILQTGSSLSSISNLVPIITPPQGFDIPYKILFKINALLQH 306

Query: 301  GYLPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQL 360
            GYLPGP LD+EFFRLVD SRFRP+Y+E AL+KLF+ KEC YEPQKWLKQQYLS+Y+SKQL
Sbjct: 307  GYLPGPALDNEFFRLVDSSRFRPDYVEYALDKLFHFKECCYEPQKWLKQQYLSFYSSKQL 366

Query: 361  PWKPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELD 420
            PWKP+ISLDDGLVYVHRVQITP+KVYFRGPEANLSNRVVR + DD+DNF+RVSFVDEELD
Sbjct: 367  PWKPNISLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELD 426

Query: 421  KIRSIDLSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFAS 480
            K+ SIDLSPRTS  N  RTRVYDR+LS LRNGIVIGDKKFEFLAFSASQLRENS WMFAS
Sbjct: 427  KLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFAS 486

Query: 481  REGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNV 540
            R+GLSAADIREWMGD RQIRNVAKYAARLGQSFGSSR+TLCVE+HEIEVI+DVEVETN +
Sbjct: 487  RKGLSAADIREWMGDLRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKI 546

Query: 541  TYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSM 600
            TYCFSDGIGKIS TLAEKVAE+CGLI+HTPSAFQIRYAGYKGVVAIDPTS KKLSLRKSM
Sbjct: 547  TYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSM 606

Query: 601  LKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPS 660
            LKY SLDTQ+DVL+WSKY PCFLNRQVINLLSTLGIKDRVF KKQKEAI QL+ IL+DPS
Sbjct: 607  LKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPS 666

Query: 661  RALEVLELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGR 720
            RALEVLELMSPGEMTS+LKE+LL YKPN+EPFLNMMLRTFRA KLLDLRTKSRIFVPKGR
Sbjct: 667  RALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGR 726

Query: 721  TMMGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVK 780
            TMMGCLDET TL+YGQVFV CS+PGRSSESNF+ +GKVVVAKNPCLHPGD+R+L+AVDVK
Sbjct: 727  TMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVK 786

Query: 781  ALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQL 840
            ALHHMVDCVVFPQKG+RPHPNECSGSDLDGDLYFV WDPEL  I+PVKPMSY+PAPT+QL
Sbjct: 787  ALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMQL 846

Query: 841  DHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPK 900
            DHDVTIEEVQ Y+  YMVNDGLG IANAHTVFAD++P+KAM+A+CIKLAKLFSIAVDFPK
Sbjct: 847  DHDVTIEEVQGYLVKYMVNDGLGGIANAHTVFADKKPKKAMAAECIKLAKLFSIAVDFPK 906

Query: 901  TGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAA 960
            TGVPAN P  LRV E+PDFMEK D+P Y S GV+GKLFR VKDVS + NT+E ++REVA 
Sbjct: 907  TGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVAT 966

Query: 961  KCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKR 1020
            KCYDPDME+DGFE YL+EAF+FK RYD+KLGNLMDYYGI+TEPEL+SGNILR+ KSFDKR
Sbjct: 967  KCYDPDMEVDGFEDYLSEAFEFKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKR 1026

Query: 1021 TDMEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGR 1080
             DMEQIS AM+SLRKEAR+WFNEKGSK   D+DDN  ++EE+AKASAWY VTYH  YWGR
Sbjct: 1027 NDMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDN--KNEEYAKASAWYRVTYHPDYWGR 1086

Query: 1081 YNEGMERDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111
            YNEGM+RDHFLSFPWCVSDKLIQIK++K C  N SP+
Sbjct: 1087 YNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPV 1112

BLAST of MC04g1001 vs. NCBI nr
Match: KAG6579193.1 (RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1769 bits (4582), Expect = 0.0
Identity = 877/1112 (78.87%), Postives = 983/1112 (88.40%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGKTIEIYGF  +VTA+EVKEF+ENHTGDGTV  VRI++F DE +RFTFATV+F+S+L  
Sbjct: 7    MGKTIEIYGFPAEVTADEVKEFIENHTGDGTVLTVRISKFNDEKARFTFATVRFTSKLGG 66

Query: 61   GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGVG-----VERMENLTLHLGSQISKEKL 120
             +VV+QAAAE+RLW+GSSYLKAR+ +R+ +          +ERMEN+ +  GS +SKEK+
Sbjct: 67   EYVVAQAAAEKRLWFGSSYLKARKVEREIKTAAAARVHGELERMENVNVQWGSLVSKEKM 126

Query: 121  SVIWKRENCSVEFGSGVRKLFVYVN---LEYKMEVWFESILRVQLRCPPDGASKFLLIQL 180
             VIWK    SVE+G GVRKL  Y++   +EYKME+ FE+IL VQLRC  D  SK  LIQL
Sbjct: 127  KVIWKGGKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGVQLRCSVDRGSKLFLIQL 186

Query: 181  QRAPRIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELS 240
            Q APRIFKK+  SSSS  SS          +S+G RWIRDVDFTPSSCIGQSFALCLELS
Sbjct: 187  QGAPRIFKKAPLSSSSRLSSE---------ESTGFRWIRDVDFTPSSCIGQSFALCLELS 246

Query: 241  PGDQLPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALV 300
             GDQLPSFF+TLVGY+E Y PF L+TGSS SS SNLVPI+TPPQGFD  +KILFKINAL+
Sbjct: 247  HGDQLPSFFQTLVGYKESYAPFILQTGSSLSSISNLVPIITPPQGFDIPYKILFKINALL 306

Query: 301  QHGYLPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSK 360
            QHGYLPGP LD+EFFRLVD SRFRP+Y+E AL+KLF+LKEC YEPQKWLKQQYLS+Y+SK
Sbjct: 307  QHGYLPGPALDNEFFRLVDSSRFRPDYVEYALDKLFHLKECCYEPQKWLKQQYLSFYSSK 366

Query: 361  QLPWKPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEE 420
            QLPWKP+ISLDDGLVYVHRVQITP+KVYFRGPEANLSNRVVR + DD+DNF+RVSFVDEE
Sbjct: 367  QLPWKPNISLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEE 426

Query: 421  LDKIRSIDLSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMF 480
            LDK+ SIDLSPRTS  N  RTRVYDR+LS LRNGIVIGDKKFEFLAFSASQLRENS WMF
Sbjct: 427  LDKLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMF 486

Query: 481  ASREGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETN 540
            ASR+GLSAADIREWMGD RQIRNVAKYAARLGQSFGSSR+TLCVE+HEIEVI+DVEVETN
Sbjct: 487  ASRKGLSAADIREWMGDLRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETN 546

Query: 541  NVTYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRK 600
             +TYCFSDGIGKIS TLAEKVAE+CGLI+HTPSAFQIRYAGYKGVVAIDPTS KKLSLRK
Sbjct: 547  KITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRK 606

Query: 601  SMLKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKD 660
            SMLKY SLDTQ+DVL+WSKY PCFLNRQVINLLSTLGIKDRVF KKQKEAI QL+ IL+D
Sbjct: 607  SMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILED 666

Query: 661  PSRALEVLELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPK 720
            PSRALEVLELMSPGEMTS+LKE+LL YKPN+EPFLNMMLRTFRA KLLDLRTKSRIFVPK
Sbjct: 667  PSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPK 726

Query: 721  GRTMMGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVD 780
            GRTMMGCLDET TL+YGQVFV CS+PGRSSESNF+ +GKVVVAKNPCLHPGD+R+L+AVD
Sbjct: 727  GRTMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVD 786

Query: 781  VKALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTI 840
            VKALHHMVDCVVFPQKG+RPHPNECSGSDLDGDLYFV WDPEL  I+PVKPMSY+PAPT+
Sbjct: 787  VKALHHMVDCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTM 846

Query: 841  QLDHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDF 900
            QLDHDVTIEEVQ Y+  YMVNDGLG IANAHTVFAD++P+KAM+A+CIKLAKLFSIAVDF
Sbjct: 847  QLDHDVTIEEVQGYLVKYMVNDGLGGIANAHTVFADKKPKKAMTAECIKLAKLFSIAVDF 906

Query: 901  PKTGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREV 960
            PKTGVPAN P  LRV E+PDFMEK D+P Y S GV+GKLFR VKDVS + NT+E ++REV
Sbjct: 907  PKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREV 966

Query: 961  AAKCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFD 1020
            A KCYDPDME+DGFE YL+EAF+FK RYD+KLGNLMDYYGI+TEPEL+SGNILR+ KSFD
Sbjct: 967  ATKCYDPDMEVDGFEDYLSEAFEFKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFD 1026

Query: 1021 KRTDMEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYW 1080
            KR DMEQIS AM+SLRKEAR+WFNEKGSK   D+DDN  ++EE+AKASAWY VTYH  YW
Sbjct: 1027 KRNDMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDN--KNEEYAKASAWYRVTYHPDYW 1086

Query: 1081 GRYNEGMERDHFLSFPWCVSDKLIQIKKKKIC 1104
            GRYNEGM+RDHFLSFPWCVSDKLI+IK++K C
Sbjct: 1087 GRYNEGMQRDHFLSFPWCVSDKLIRIKREKTC 1107

BLAST of MC04g1001 vs. ExPASy TrEMBL
Match: A0A6J1CZM7 (RNA-dependent RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111015673 PE=3 SV=1)

HSP 1 Score: 2234 bits (5788), Expect = 0.0
Identity = 1110/1111 (99.91%), Postives = 1110/1111 (99.91%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA
Sbjct: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60

Query: 61   GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWK 120
            GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWK
Sbjct: 61   GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWK 120

Query: 121  RENCSVEFGSGVRKLFVYVNLEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAPRIFK 180
             ENCSVEFGSGVRKLFVYVNLEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAPRIFK
Sbjct: 121  GENCSVEFGSGVRKLFVYVNLEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAPRIFK 180

Query: 181  KSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQLPSF 240
            KSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQLPSF
Sbjct: 181  KSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQLPSF 240

Query: 241  FKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQHGYLPGP 300
            FKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQHGYLPGP
Sbjct: 241  FKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQHGYLPGP 300

Query: 301  LLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPWKPDI 360
            LLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPWKPDI
Sbjct: 301  LLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPWKPDI 360

Query: 361  SLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSID 420
            SLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSID
Sbjct: 361  SLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSID 420

Query: 421  LSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSA 480
            LSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSA
Sbjct: 421  LSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSA 480

Query: 481  ADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVTYCFSD 540
            ADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVTYCFSD
Sbjct: 481  ADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVTYCFSD 540

Query: 541  GIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYKSL 600
            GIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYKSL
Sbjct: 541  GIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLKYKSL 600

Query: 601  DTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVL 660
            DTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVL
Sbjct: 601  DTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVL 660

Query: 661  ELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL 720
            ELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL
Sbjct: 661  ELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL 720

Query: 721  DETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMV 780
            DETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMV
Sbjct: 721  DETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMV 780

Query: 781  DCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTI 840
            DCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTI
Sbjct: 781  DCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTI 840

Query: 841  EEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPAN 900
            EEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPAN
Sbjct: 841  EEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPAN 900

Query: 901  LPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPD 960
            LPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPD
Sbjct: 901  LPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPD 960

Query: 961  MEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRTDMEQI 1020
            MEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRTDMEQI
Sbjct: 961  MEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRTDMEQI 1020

Query: 1021 SHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGME 1080
            SHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGME
Sbjct: 1021 SHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGME 1080

Query: 1081 RDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111
            RDHFLSFPWCVSDKLIQIKKKKICQENSSPI
Sbjct: 1081 RDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111

BLAST of MC04g1001 vs. ExPASy TrEMBL
Match: A0A6J1K1Q3 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111489826 PE=3 SV=1)

HSP 1 Score: 1773 bits (4591), Expect = 0.0
Identity = 882/1122 (78.61%), Postives = 985/1122 (87.79%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGK IEIYGF  +VTA+EVKEF+ENHTGDGTV  VRI++  DE +RFTFATV+F+S+L  
Sbjct: 7    MGKMIEIYGFPAEVTADEVKEFIENHTGDGTVLTVRISKPNDEKARFTFATVRFTSKLGG 66

Query: 61   GHVVSQAAAEERLWYGSSYLKAREADRQNRRGGV--------GVERMENLTLHLGSQISK 120
             +VV+QAAAE+RLW+GSSYLKAR+ +R+ R            G+ERMEN+ +  GS +SK
Sbjct: 67   EYVVAQAAAEKRLWFGSSYLKARKVEREIRTATAAAAARVHGGLERMENVNVQWGSLVSK 126

Query: 121  EKLSVIWKRENCSVEFGSGVRKLFVYVN---LEYKMEVWFESILRVQLRCPPDGASKFLL 180
            EK+ VIWK    SVE+G G RKL  Y++   +EYKME+ FE+IL VQLRC  D  S+  L
Sbjct: 127  EKMKVIWKEGKWSVEYGIGARKLGFYLSYEGVEYKMELCFENILGVQLRCSGDRGSELFL 186

Query: 181  IQLQRAPRIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCL 240
            IQLQ APRIFKK+ SSSSS  SS          +S+G RWIRDVDFTPSSCIGQSFALCL
Sbjct: 187  IQLQGAPRIFKKTPSSSSSRLSSE---------ESTGFRWIRDVDFTPSSCIGQSFALCL 246

Query: 241  ELSPGDQLPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKIN 300
            ELSPGDQLPSFF+TLVGY+E Y PF L  GSS SS SNLVPI+TPPQGFD S+KILFKIN
Sbjct: 247  ELSPGDQLPSFFRTLVGYKESYAPFILHPGSSLSSISNLVPIITPPQGFDISYKILFKIN 306

Query: 301  ALVQHGYLPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYY 360
            AL+QHGYLPGP LD+EFFRLVD SRFRPEYIE ALEKLF+ KEC YEPQKWLKQQYLS+Y
Sbjct: 307  ALLQHGYLPGPALDNEFFRLVDSSRFRPEYIEYALEKLFHFKECCYEPQKWLKQQYLSFY 366

Query: 361  NSKQLPWKPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFV 420
            +SKQLP KP++SLDDGLVYVHRVQITP+KVYFRGPEANLSNRVVR + DD+DNF+RVSFV
Sbjct: 367  SSKQLPCKPNVSLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFV 426

Query: 421  DEELDKIRSIDLSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSV 480
            DEELDK+ SIDLSPRTS  N  RTRVYDR+LS LRNGIVIGDKKFEFLAFSASQLRENS 
Sbjct: 427  DEELDKLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSC 486

Query: 481  WMFASREGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEV 540
            WMFASR+GLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSR+TLCVE+HEIEVI DVEV
Sbjct: 487  WMFASRKGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVIPDVEV 546

Query: 541  ETNNVTYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLS 600
            ETN +TYCFSDGIGKIS TLAEKVAE+CGLI+HTPSAFQIRYAGYKGVVAIDPTS KKLS
Sbjct: 547  ETNKITYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLS 606

Query: 601  LRKSMLKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCI 660
            LRKSMLKY SLDTQ+DVL+WSKY PCFLNRQVINLLSTLGIKDRVF KKQKEAI QL+ I
Sbjct: 607  LRKSMLKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSI 666

Query: 661  LKDPSRALEVLELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIF 720
            L+DPSRALEVLELMSPGEMTS+LKE+LL YKPN+EPFLNMMLRTFRA KLLDLRTKSRIF
Sbjct: 667  LEDPSRALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIF 726

Query: 721  VPKGRTMMGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLN 780
            VPKGRTMMGCLDET TL+YGQVFV CS+PGRSSESNF+ +GKVVVAKNPCLHPGD+R+L+
Sbjct: 727  VPKGRTMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLD 786

Query: 781  AVDVKALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPA 840
            AVDVKALHHMV+CVVFPQKG+RPHPNECSGSDLDGDLYFV WDPEL  I+PVKPMSY+PA
Sbjct: 787  AVDVKALHHMVNCVVFPQKGERPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPA 846

Query: 841  PTIQLDHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIA 900
            PT++LDHDVTIEEVQEY+A YMVNDGLG IANAHTVFAD++P+KAM+A+CIKLAKLFSIA
Sbjct: 847  PTMRLDHDVTIEEVQEYLAKYMVNDGLGGIANAHTVFADKKPKKAMTAECIKLAKLFSIA 906

Query: 901  VDFPKTGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYT 960
            VDFPKTGVPAN P  LRV E+PDFMEK D+P Y S GV+GKLFR VKDVS + NTIE ++
Sbjct: 907  VDFPKTGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTIEIFS 966

Query: 961  REVAAKCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGK 1020
            REVA KCYDPDME+DGFE YL+EAF++K RYD+KLGNLMDYYGI+TEPEL+SGNILR+ K
Sbjct: 967  REVATKCYDPDMEVDGFEDYLSEAFEYKARYDFKLGNLMDYYGIKTEPELISGNILRMAK 1026

Query: 1021 SFDKRTDMEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQ 1080
            SFDKR D+EQIS A++SLRKEAR+WFNEKGSK  CD+DD    DEE+AKASAWY VTYH 
Sbjct: 1027 SFDKRNDLEQISLAIKSLRKEARSWFNEKGSKSACDEDDK---DEEYAKASAWYRVTYHP 1086

Query: 1081 SYWGRYNEGMERDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111
             YWGRYNEGM+RDHFLSFPWCVSDKLIQIK++K C  N SPI
Sbjct: 1087 DYWGRYNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVNLSPI 1116

BLAST of MC04g1001 vs. ExPASy TrEMBL
Match: A0A6J1FF44 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111444909 PE=3 SV=1)

HSP 1 Score: 1770 bits (4585), Expect = 0.0
Identity = 880/1117 (78.78%), Postives = 985/1117 (88.18%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGKTIEIYGF   VTA+EVKEF+ENHTGDGTV  VRI++  DE +RFTFATVQF+S+L  
Sbjct: 7    MGKTIEIYGFPTQVTADEVKEFIENHTGDGTVLTVRISKLNDEKARFTFATVQFTSKLGG 66

Query: 61   GHVVSQAAAEERLWYGSSYLKAREADRQNR---RGGVGVERMENLTLHLGSQISKEKLSV 120
             +VV+QAAAE+RLW+GSSYLKAR+ +R+ +   R    +ERMEN+ +  GS +SKE++ V
Sbjct: 67   EYVVAQAAAEKRLWFGSSYLKARKVEREIKTAARVHGELERMENVNVQWGSLVSKEEMKV 126

Query: 121  IWKRENCSVEFGSGVRKLFVYVN---LEYKMEVWFESILRVQLRCPPDGASKFLLIQLQR 180
            IWK    SVE+G GVRKL  Y++   +EYKME+ FE+IL VQLRC  D  SK  LIQLQ 
Sbjct: 127  IWKGGKWSVEYGIGVRKLGFYLSYEGVEYKMELCFENILGVQLRCSVDRGSKLFLIQLQG 186

Query: 181  APRIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPG 240
            APRIFKK+  SSSS  SS          +S+G RWIRDVDFTPSSCIGQSFALCLELS G
Sbjct: 187  APRIFKKAPLSSSSRLSSE---------ESTGFRWIRDVDFTPSSCIGQSFALCLELSHG 246

Query: 241  DQLPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQH 300
            DQLPSFF+TLVGY+E Y PF L+TGSS SS SNLVPI+TPPQGFD  +KILFKINAL+QH
Sbjct: 247  DQLPSFFQTLVGYKESYAPFILQTGSSLSSISNLVPIITPPQGFDIPYKILFKINALLQH 306

Query: 301  GYLPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQL 360
            GYLPGP LD+EFFRLVD SRFRP+Y+E AL+KLF+ KEC YEPQKWLKQQYLS+Y+SKQL
Sbjct: 307  GYLPGPALDNEFFRLVDSSRFRPDYVEYALDKLFHFKECCYEPQKWLKQQYLSFYSSKQL 366

Query: 361  PWKPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELD 420
            PWKP+ISLDDGLVYVHRVQITP+KVYFRGPEANLSNRVVR + DD+DNF+RVSFVDEELD
Sbjct: 367  PWKPNISLDDGLVYVHRVQITPTKVYFRGPEANLSNRVVRHFIDDVDNFLRVSFVDEELD 426

Query: 421  KIRSIDLSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFAS 480
            K+ SIDLSPRTS  N  RTRVYDR+LS LRNGIVIGDKKFEFLAFSASQLRENS WMFAS
Sbjct: 427  KLHSIDLSPRTSAENDLRTRVYDRVLSVLRNGIVIGDKKFEFLAFSASQLRENSCWMFAS 486

Query: 481  REGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNV 540
            R+GLSAADIREWMGD RQIRNVAKYAARLGQSFGSSR+TLCVE+HEIEVI+DVEVETN +
Sbjct: 487  RKGLSAADIREWMGDLRQIRNVAKYAARLGQSFGSSRRTLCVEQHEIEVISDVEVETNKI 546

Query: 541  TYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSM 600
            TYCFSDGIGKIS TLAEKVAE+CGLI+HTPSAFQIRYAGYKGVVAIDPTS KKLSLRKSM
Sbjct: 547  TYCFSDGIGKISGTLAEKVAEKCGLISHTPSAFQIRYAGYKGVVAIDPTSTKKLSLRKSM 606

Query: 601  LKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPS 660
            LKY SLDTQ+DVL+WSKY PCFLNRQVINLLSTLGIKDRVF KKQKEAI QL+ IL+DPS
Sbjct: 607  LKYTSLDTQVDVLSWSKYQPCFLNRQVINLLSTLGIKDRVFVKKQKEAIDQLDSILEDPS 666

Query: 661  RALEVLELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGR 720
            RALEVLELMSPGEMTS+LKE+LL YKPN+EPFLNMMLRTFRA KLLDLRTKSRIFVPKGR
Sbjct: 667  RALEVLELMSPGEMTSILKELLLLYKPNEEPFLNMMLRTFRAAKLLDLRTKSRIFVPKGR 726

Query: 721  TMMGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVK 780
            TMMGCLDET TL+YGQVFV CS+PGRSSESNF+ +GKVVVAKNPCLHPGD+R+L+AVDVK
Sbjct: 727  TMMGCLDETRTLEYGQVFVHCSLPGRSSESNFVVKGKVVVAKNPCLHPGDVRLLDAVDVK 786

Query: 781  ALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQL 840
            ALHHMVDCVVFPQKG+RPHPNECSGSDLDGDLYFV WDPEL  I+PVKPMSY+PAPT+QL
Sbjct: 787  ALHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVGWDPELTRIKPVKPMSYEPAPTMQL 846

Query: 841  DHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPK 900
            DHDVTIEEVQ Y+  YMVNDGLG IANAHTVFAD++P+KAM+A+CIKLAKLFSIAVDFPK
Sbjct: 847  DHDVTIEEVQGYLVKYMVNDGLGGIANAHTVFADKKPKKAMAAECIKLAKLFSIAVDFPK 906

Query: 901  TGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAA 960
            TGVPAN P  LRV E+PDFMEK D+P Y S GV+GKLFR VKDVS + NT+E ++REVA 
Sbjct: 907  TGVPANFPHNLRVREYPDFMEKPDKPTYVSNGVLGKLFRGVKDVSSDVNTVEIFSREVAT 966

Query: 961  KCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKR 1020
            KCYDPDME+DGFE YL+EAF+FK RYD+KLGNLMDYYGI+TEPEL+SGNILR+ KSFDKR
Sbjct: 967  KCYDPDMEVDGFEDYLSEAFEFKARYDFKLGNLMDYYGIKTEPELISGNILRMAKSFDKR 1026

Query: 1021 TDMEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGR 1080
             DMEQIS AM+SLRKEAR+WFNEKGSK   D+DDN  ++EE+AKASAWY VTYH  YWGR
Sbjct: 1027 NDMEQISLAMKSLRKEARSWFNEKGSKSAYDEDDN--KNEEYAKASAWYRVTYHPDYWGR 1086

Query: 1081 YNEGMERDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111
            YNEGM+RDHFLSFPWCVSDKLIQIK++K C  N SP+
Sbjct: 1087 YNEGMQRDHFLSFPWCVSDKLIQIKREKTCLVNFSPV 1112

BLAST of MC04g1001 vs. ExPASy TrEMBL
Match: A0A6J1JTB1 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111487656 PE=3 SV=1)

HSP 1 Score: 1746 bits (4521), Expect = 0.0
Identity = 874/1115 (78.39%), Postives = 979/1115 (87.80%), Query Frame = 0

Query: 2    GKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAAG 61
            GKTIE++GFRR+V+A EVKEF+ENHTG+GTVS VRI++ +D   R TFA V+F S++AA 
Sbjct: 5    GKTIEVFGFRREVSAGEVKEFMENHTGEGTVSKVRISKPKDGKGRLTFARVEFRSKVAAE 64

Query: 62   HVVSQAAAEERLWYGSSYLKAREADRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWKR 121
            +VV +A AEE LW+G  YLKAR  +R+ R     VERME + + LGS ISKE++ VIW+ 
Sbjct: 65   YVVEKAEAEEGLWFGRWYLKARGVEREMR-----VERMEKVRVQLGSVISKEEMRVIWRG 124

Query: 122  ENCSVEFGSGVRKLFVYVNL-----EYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAP 181
            E  SVE+G+G+RKL+ Y++      +YKME+ FE+IL VQLRCP + +S   LIQLQ AP
Sbjct: 125  EEWSVEYGNGMRKLWFYLSYGVEDDDYKMELRFENILGVQLRCPHNSSSNLFLIQLQGAP 184

Query: 182  RIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQ 241
            RIFKK  SSSSSSS     +FY KES  +G RWIRDVDFTPSSCIGQSF+LCLE+SPGDQ
Sbjct: 185  RIFKKCPSSSSSSS-----QFYSKES--TGFRWIRDVDFTPSSCIGQSFSLCLEVSPGDQ 244

Query: 242  LPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQHGY 301
            LPSFF+TLVGY+EIYGPF L TGS+FSSTSNLVPIVTPPQ FD  +KILFKINALVQHGY
Sbjct: 245  LPSFFQTLVGYKEIYGPFKLSTGSAFSSTSNLVPIVTPPQPFDIPYKILFKINALVQHGY 304

Query: 302  LPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPW 361
            LPG  LDD+FFRLVDPSRFR +YIE ALEKLF+LKEC YEPQKWLKQQYLS+ +S QLPW
Sbjct: 305  LPGSALDDKFFRLVDPSRFRSDYIEYALEKLFSLKECCYEPQKWLKQQYLSFCSSMQLPW 364

Query: 362  KPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKI 421
            K +ISLDD LVYVHRVQITP+KVYFRGPEANLSNRVVR++ DDIDNF+RVSFVDEELDKI
Sbjct: 365  KANISLDDSLVYVHRVQITPAKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEELDKI 424

Query: 422  RSIDLSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASRE 481
             S DLSPRTST   ERTRVYDRILS LRNGIVIG KKFEFLAFSASQLRENS WMFASRE
Sbjct: 425  HSSDLSPRTSTEKIERTRVYDRILSVLRNGIVIGGKKFEFLAFSASQLRENSFWMFASRE 484

Query: 482  GLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNVTY 541
            GL+AADIREWMGDFR+IRNVAKYAARLGQSFGSSRKTLCVEE+EIEVI D EVE  N+ Y
Sbjct: 485  GLNAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEENEIEVIPDAEVERKNIKY 544

Query: 542  CFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSMLK 601
            CFSDGIGKISE LAE VAE+CGLI+HTPSAFQIRYAGYKGVVA+DPTS+KKLSLRKSMLK
Sbjct: 545  CFSDGIGKISEALAEMVAEKCGLISHTPSAFQIRYAGYKGVVAVDPTSKKKLSLRKSMLK 604

Query: 602  YKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRA 661
            Y SLDTQLDVL+WSKY PCFLNRQVINLLSTLGI+D VF K+QK+A+ QL+ IL+DPS+A
Sbjct: 605  YMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIRDDVFVKQQKKAVDQLDSILRDPSKA 664

Query: 662  LEVLELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTM 721
            LEVLELMSPGEMTSVLK+MLL+Y P++EPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTM
Sbjct: 665  LEVLELMSPGEMTSVLKDMLLFYNPHEEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTM 724

Query: 722  MGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKAL 781
            MGCLDET TL+YGQVF+ CSVPGRSSESNF+ +GKVVVAKNPCLHPGD+RVL+AVDVK L
Sbjct: 725  MGCLDETRTLEYGQVFIHCSVPGRSSESNFVVKGKVVVAKNPCLHPGDVRVLDAVDVKTL 784

Query: 782  HHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQLDH 841
            HHMVDCVVFPQKG+RPHPNECSGSDLDGDLYFVCWDPEL CIRP+KPMSY+PAPTIQLDH
Sbjct: 785  HHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIRPIKPMSYEPAPTIQLDH 844

Query: 842  DVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPKTG 901
            DVT+EEVQEY ANYMVNDGLG IANAHTVFAD +P+KAMSA+CI+LAKLFSIAVDFPKTG
Sbjct: 845  DVTLEEVQEYFANYMVNDGLGGIANAHTVFADMKPKKAMSAECIELAKLFSIAVDFPKTG 904

Query: 902  VPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAAKC 961
            VPANLP  LRVHE+PDFMEK ++  Y S GVIGKLFR VKDVS + N IET+TREVA KC
Sbjct: 905  VPANLPRSLRVHEYPDFMEKPNKRTYISNGVIGKLFRGVKDVSSDINNIETFTREVAVKC 964

Query: 962  YDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKRTD 1021
            YDPDME+ GFE YL+EAFD+K  YD+KLGNLMDYYGI TEPELVSGNILR+GKSFDKR D
Sbjct: 965  YDPDMEVMGFENYLSEAFDYKRMYDFKLGNLMDYYGIETEPELVSGNILRMGKSFDKRND 1024

Query: 1022 MEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYN 1081
            MEQIS AMRSLRKEAR WFNEK SK   ++  N  ED E+AKASAWYHVTYH ++WGRYN
Sbjct: 1025 MEQISLAMRSLRKEARGWFNEKASKSIYNN--NKGEDNEYAKASAWYHVTYHPNFWGRYN 1084

Query: 1082 EGMERDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111
            EGM+RDHFLSFPWCVSDKLIQIK++K+    SSP+
Sbjct: 1085 EGMQRDHFLSFPWCVSDKLIQIKREKM---ESSPV 1102

BLAST of MC04g1001 vs. ExPASy TrEMBL
Match: A0A6J1EB47 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111430971 PE=3 SV=1)

HSP 1 Score: 1742 bits (4512), Expect = 0.0
Identity = 872/1117 (78.07%), Postives = 985/1117 (88.18%), Query Frame = 0

Query: 2    GKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAAG 61
            GKTIE++GF R+V+A EVKEF+ENHTG+GTVS VRI++ + E SR T A V+F S++AA 
Sbjct: 5    GKTIEVFGFGREVSAGEVKEFMENHTGEGTVSKVRISKPKYEKSRLTSARVEFRSKVAAE 64

Query: 62   HVVSQAAAEERLWYGSSYLKAREADRQNRRGG--VGVERMENLTLHLGSQISKEKLSVIW 121
            +VV +A AEERLW+G  YLKAR  +R+  R      +ER+E + + LGS I K+++ VIW
Sbjct: 65   YVVEKAEAEERLWFGRWYLKARRVEREREREMRVERLERLEKVRVQLGSVIWKDEMRVIW 124

Query: 122  KRENCSVEFGSGVRKLFVYVNL-----EYKMEVWFESILRVQLRCPPDGASKFLLIQLQR 181
            + E+ SVE+G+G+RKL+ Y++      +YKME+ FE+IL VQLRCP + +S   LIQLQ 
Sbjct: 125  RGEDWSVEYGNGMRKLWFYLSYGVEDDDYKMELRFENILGVQLRCPHNSSSNLFLIQLQG 184

Query: 182  APRIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPG 241
            APRIFKK  SSSSSSSS    +FY KES  +G RWIRDVDFTPSSCIGQSFALC E+SPG
Sbjct: 185  APRIFKKCPSSSSSSSS----QFYSKES--TGFRWIRDVDFTPSSCIGQSFALCFEVSPG 244

Query: 242  DQLPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPPQGFDFSFKILFKINALVQH 301
            DQLPSFF+TLVGY+EIYGPF L TGS+FSSTSNLVPIVTPPQ F   +KILFKINALVQH
Sbjct: 245  DQLPSFFQTLVGYKEIYGPFKLSTGSAFSSTSNLVPIVTPPQPFHIPYKILFKINALVQH 304

Query: 302  GYLPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQL 361
            GYLPG  LDD+FFRLVDP+RFR +YIE ALEKLF+LKEC YEPQKWLKQQYLS+ +S QL
Sbjct: 305  GYLPGSALDDKFFRLVDPTRFRSDYIEYALEKLFSLKECCYEPQKWLKQQYLSFCSSMQL 364

Query: 362  PWKPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELD 421
            PWK +ISLDD LVYVHRVQITP+KVYFRGPEANLSNRVVR++ DDIDNF+RVSFVDEELD
Sbjct: 365  PWKANISLDDSLVYVHRVQITPAKVYFRGPEANLSNRVVRRFIDDIDNFLRVSFVDEELD 424

Query: 422  KIRSIDLSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFAS 481
            KI S DLSPRTST   ERTRVYDRILS LRNGIVIG KKFEFLAFSASQLRENS WMFAS
Sbjct: 425  KIYSSDLSPRTSTEKIERTRVYDRILSVLRNGIVIGGKKFEFLAFSASQLRENSFWMFAS 484

Query: 482  REGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNV 541
            REGL+AADIREWMGDFR+IRNVAKYAARLGQSFGSSRKTLCVEE+EIEVI DVEVE  N+
Sbjct: 485  REGLNAADIREWMGDFREIRNVAKYAARLGQSFGSSRKTLCVEENEIEVIPDVEVERKNI 544

Query: 542  TYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSM 601
             YCFSDGIGKISE LAE VAE+CGLI+HTPSAFQIRYAGYKGVVA+DPTS+KKLSLRKSM
Sbjct: 545  KYCFSDGIGKISEALAEMVAEKCGLISHTPSAFQIRYAGYKGVVAVDPTSKKKLSLRKSM 604

Query: 602  LKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPS 661
            LKY SLDTQLDVL+WSKY PCFLNRQVINLLSTLGI+D VF K+QK+A+ QL+ IL+DPS
Sbjct: 605  LKYMSLDTQLDVLSWSKYQPCFLNRQVINLLSTLGIQDDVFVKQQKKAVDQLDSILRDPS 664

Query: 662  RALEVLELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGR 721
            +ALEVLELMSPGEMTSVLK+MLL+Y P++EPFLNMMLRTFRADKLLDLRTKSRIFVP+GR
Sbjct: 665  KALEVLELMSPGEMTSVLKDMLLFYNPHEEPFLNMMLRTFRADKLLDLRTKSRIFVPEGR 724

Query: 722  TMMGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVK 781
            TMMGCLDET TL+YGQVF+ CSVPGRSSESNF+ +GKVVVAKNPCLHPGD+RVL+AVDVK
Sbjct: 725  TMMGCLDETRTLEYGQVFIHCSVPGRSSESNFVVKGKVVVAKNPCLHPGDVRVLDAVDVK 784

Query: 782  ALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQL 841
             LHHMVDCVVFPQKG+RPHPNECSGSDLDGDLYFVCWDPEL CIRP+KPMSY+PAPTIQL
Sbjct: 785  TLHHMVDCVVFPQKGKRPHPNECSGSDLDGDLYFVCWDPELTCIRPIKPMSYEPAPTIQL 844

Query: 842  DHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFPK 901
            DHDVTIEEVQEY ANYMVNDGLG IANAHTVFAD++P+KAMSA+CI+LAKLFSIAVDFPK
Sbjct: 845  DHDVTIEEVQEYFANYMVNDGLGGIANAHTVFADKKPKKAMSAECIELAKLFSIAVDFPK 904

Query: 902  TGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVAA 961
            TGVPANLP  LRVHE+PDFMEK ++  Y S GVIGKLFR VKDVS + N IET+TREVAA
Sbjct: 905  TGVPANLPRSLRVHEYPDFMEKPNKRTYTSNGVIGKLFRGVKDVSSDINNIETFTREVAA 964

Query: 962  KCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDKR 1021
            KCYDPDME+ GFE YL+EAFD+K+ YD+KLGNLMDYYGI TEPELVSGNILR+GKSFDKR
Sbjct: 965  KCYDPDMEVMGFENYLSEAFDYKSMYDFKLGNLMDYYGIETEPELVSGNILRMGKSFDKR 1024

Query: 1022 TDMEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGR 1081
             DMEQIS AMRSLRKEAR WFNEKGSK   ++  N DED+E+AKASAWYHVTYH ++WGR
Sbjct: 1025 NDMEQISLAMRSLRKEARGWFNEKGSKSIYNN--NKDEDDEYAKASAWYHVTYHPNFWGR 1084

Query: 1082 YNEGMERDHFLSFPWCVSDKLIQIKKKKICQENSSPI 1111
            YNEGM+RDHFLSFPWCVS+KLIQIK++K+    SSP+
Sbjct: 1085 YNEGMQRDHFLSFPWCVSEKLIQIKREKM---ESSPV 1110

BLAST of MC04g1001 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 1230.7 bits (3183), Expect = 0.0e+00
Identity = 643/1110 (57.93%), Postives = 802/1110 (72.25%), Query Frame = 0

Query: 1    MGKTIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAA 60
            MGKTI+++GF   V+AEEVK+FLE  TG GTV A+++ + +    R  +A VQF+SE   
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPR-VYAIVQFTSERHT 60

Query: 61   GHVVSQAAAEERLWYGSSYLKAREADRQ-NRRGGVGVERMENLTLHLGSQISKEKLSVIW 120
              +++  AA ERL+YG SYLKA E ++    +    +  +  L +  G Q+S +K   +W
Sbjct: 61   RLIIT--AAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLW 120

Query: 121  KRENCSVEFGSGVRKL---FVYVNLEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAP 180
              ++  V FG G+RKL   F +   +Y++E+ +E+I ++ L  P   +SKFL+IQ+  AP
Sbjct: 121  SAQDVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAP 180

Query: 181  RIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQ 240
            +IF+K     +         FY   S  S  +WIR  DFT SSCIGQS A CLEL     
Sbjct: 181  KIFEKEDQPINLLFGIMD--FY---SDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLN 240

Query: 241  LPSFFKTLVGY-EEIYGPFNLETGSSFSSTSN-LVPIVTPPQGFDFSFKILFKINALVQH 300
            +P F +    Y E     F +E+GSS+SS +N LVP+V PP GF   F+ILFK+N LVQ+
Sbjct: 241  VPDFRENFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQN 300

Query: 301  GYLPGPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLSYYNSKQL 360
              L GP LD +F+RL++  ++    I+  LEKLF+L EC YEP  WL+ +Y  + +  +L
Sbjct: 301  ACLSGPALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKL 360

Query: 361  PWKPDISLDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELD 420
            P  P ISLDDGLVY++RVQ+TP++VYF GPE N+SNRV+R YS  I+NF+RVSFVDE+L+
Sbjct: 361  PLSPTISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLE 420

Query: 421  KIRSIDLSPRTSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFAS 480
            K+RS+DLSPR+ST    RT++YDRI S LR+GIVIGDKKFEFLAFS+SQLRENS WMFA 
Sbjct: 421  KVRSMDLSPRSSTQ--RRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAP 480

Query: 481  REGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDVEVETNNV 540
             + ++AA IR WMGDF  IRNVAKYAARLGQSF SSR+TL V   EIEVI DVE+ +   
Sbjct: 481  IDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGT 540

Query: 541  TYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAIDPTSEKKLSLRKSM 600
             Y FSDGIGKIS   A KVA +CGL   +PSAFQIRY GYKGVVA+DP S KKLSLRKSM
Sbjct: 541  RYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSM 600

Query: 601  LKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPS 660
             K++S +T+LDVLAWSKY PC++NRQ+I LLSTLG+ D VFEKKQ+E + +L+ IL  P 
Sbjct: 601  SKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPL 660

Query: 661  RALEVLELMSPGEMTSVLKEMLLY-YKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKG 720
             A E L LM+PGE T++LK ++L  YKP+ EPFL+MML+ FRA KLL+LRTK+RIF+  G
Sbjct: 661  EAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGG 720

Query: 721  RTMMGCLDETGTLKYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDV 780
            R+MMGCLDET TL+YGQV VQ S P R     FI  G VVVAKNPCLHPGD+RVL AV+V
Sbjct: 721  RSMMGCLDETRTLEYGQVVVQYSDPMRPGR-RFIITGPVVVAKNPCLHPGDVRVLQAVNV 780

Query: 781  KALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVKPMSYKPAPTIQ 840
             AL+HMVDCVVFPQKG RPHPNECSGSDLDGD+YFVCWD EL   R  +PM Y P PT  
Sbjct: 781  PALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDYTPEPTQI 840

Query: 841  LDHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLAKLFSIAVDFP 900
            LDHDVTIEEV+EY ANY+VND LG IANAHT FAD+EP KA S  CI+LAK FS AVDFP
Sbjct: 841  LDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFSTAVDFP 900

Query: 901  KTGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDVSFNTNTIETYTREVA 960
            KTGV A +P  L V E+PDFMEK D+P YESK VIGKLFR VK+ +    +I+++T +VA
Sbjct: 901  KTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIKSFTLDVA 960

Query: 961  AKCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSGNILRVGKSFDK 1020
            +K YD DME+DGFE+Y++EAF  K  YD+KLGNLMDYYGI+TE E++SG I+R+ KSF K
Sbjct: 961  SKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMRMSKSFTK 1020

Query: 1021 RTDMEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWG 1080
            R D E I  A+R+LRKE  + FN            + +E+ E AKASAWYHVTYH SYWG
Sbjct: 1021 RRDAESIGRAVRALRKETLSLFNA-----------SEEEENESAKASAWYHVTYHSSYWG 1080

Query: 1081 RYNEGMERDHFLSFPWCVSDKLIQIKKKKI 1104
             YNEG+ RDHFLSF WCV DKL++IKK  +
Sbjct: 1081 LYNEGLNRDHFLSFAWCVYDKLVRIKKTNL 1088

BLAST of MC04g1001 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 734.2 bits (1894), Expect = 1.6e-211
Identity = 447/1140 (39.21%), Postives = 657/1140 (57.63%), Query Frame = 0

Query: 4    TIEIYGFRRDVTAEEVKEFLENHTGDGTVSAVRIAEFRDENSRFTFATVQFSSELAAGHV 63
            T++I    + + A+E+  FLE H G+ TV A+ I   RD      FA VQF++ L     
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTT-LEVKSR 70

Query: 64   VSQAAAEERLWYGSSYLKAREA-DRQNRRGGVGVERMENLTLHLGSQISKEKLSVIWKRE 123
                +++ +L + +  L+  EA D    R     +R++++ L +G   S EK        
Sbjct: 71   AQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEK-------R 130

Query: 124  NCSVEFGSGVR----------KLFVYVNLE-YKMEVWFESILRVQLRCPPDGASKF--LL 183
             C++E   GVR          + +V+ + + YK+EV FE I+     C    AS+    L
Sbjct: 131  FCALEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFL 190

Query: 184  IQLQRAPRIFKKSSSSSSSSSSSSSSRFYFKESQSSGSRWIRDVDFTPSSCIGQSFALCL 243
            ++L+  P++FK+ +   ++   S   RF     +     WIR  DF+ S  IG S   CL
Sbjct: 191  LKLKYGPKVFKRVTVHIATKFKSDRYRFC---KEDFDFMWIRTTDFSGSKSIGTSTCFCL 250

Query: 244  ELSPGDQLPSFFKTLVGYEEIYGPFNLETGSSFSSTSNLVPIVTPP-QGFDFSFKILFKI 303
            E+  G  +   F  L  Y E         G +F+S + +VP++     G +F ++ILF++
Sbjct: 251  EVHNGSTMLDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQL 310

Query: 304  NALVQHGYLP-GPLLDDEFFRLVDPSRFRPEYIERALEKLFNLKECFYEPQKWLKQQYLS 363
            NALV    +      D E  +++         +   L+KL       Y+P  ++K Q  S
Sbjct: 311  NALVHAQKISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQS 370

Query: 364  YYNSKQLPWKPDIS----LDDGLVYVHRVQITPSKVYFRGPEANLSNRVVRQYSDDIDNF 423
                K++   P  +     +  ++   R  +TPSK+Y  GPE   +N VV+ +++ + +F
Sbjct: 371  VV--KKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDF 430

Query: 424  IRVSFVDEELDKIRSIDLSPRTST---ANGERTRVYDRILSTLRNGIVIGDKKFEFLAFS 483
            +RV+FV+E+  K+ +  LS  +         RT +Y+R+LS L  GI +G K+FEFLAFS
Sbjct: 431  MRVTFVEEDWSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFS 490

Query: 484  ASQLRENSVWMFASREGLSAADIREWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHE 543
            ASQLR NSVWMFAS E + A DIREWMG FR+IR+++K AAR+GQ F +SR+TL V   +
Sbjct: 491  ASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQD 550

Query: 544  IEVITDVEVETNNVTYCFSDGIGKISETLAEKVAERCGLINHTPSAFQIRYAGYKGVVAI 603
            +E I D+EV T+   YCFSDGIGKIS   A++VA++CGL +H PSAFQIRY GYKGV+A+
Sbjct: 551  VEQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAV 610

Query: 604  DPTSEKKLSLRKSMLKYKSLDTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQK 663
            D +S +KLSLR SMLK+ S +  L+V  W++ +PCFLNR++I LLSTLGI+D +FE  Q 
Sbjct: 611  DRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQA 670

Query: 664  EAIYQLNCILKDPSRALEVLELMSPGEMTSVLKEMLLY-YKPNKEPFLNMMLRTFRADKL 723
              +  L  +L+D   AL VL+ +S     ++L +MLL  Y P+ EP+L+MMLR     +L
Sbjct: 671  VHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQL 730

Query: 724  LDLRTKSRIFVPKGRTMMGCLDETGTLKYGQVFVQCSVP------------GRSSESNFI 783
             +L+++ RI VPKGR ++GC+DE G L+YGQV+V+ ++              +  E   +
Sbjct: 731  SELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSV 790

Query: 784  PEGKVVVAKNPCLHPGDMRVLNAVDVKALHH--MVDCVVFPQKGQRPHPNECSGSDLDGD 843
              GKVVV KNPCLHPGD+RVL+A+          +DC++FPQKG+RPHPNECSG DLDGD
Sbjct: 791  VIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGD 850

Query: 844  LYFVCWDPELNCIRPVKPMSYKPAPTIQLDHDVTIEEVQEYMANYMVNDGLGAIANAHTV 903
             +FV WD ++       PM Y  +    +DHDVT+EE+ ++  +YM++D LG I+ AH V
Sbjct: 851  QFFVSWDEKIIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLV 910

Query: 904  FADREPRKAMSAKCIKLAKLFSIAVDFPKTGVPANLPPFLRVHEFPDFMEKLDRPAYESK 963
             ADR+P KA S KC++LA L S AVDF KTG PA +P  L+  EFPDF+E+ ++P Y S+
Sbjct: 911  HADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISE 970

Query: 964  GVIGKLFRSVKDVSFNTNTIETYTREVAAKCYDPDMEIDGFEKYLNEAFDFKTRYDYKLG 1023
             V GKL+R+VK  S      E  + +  A  YD  +E  GFE ++  A   +  Y  KL 
Sbjct: 971  SVFGKLYRAVKS-SLAQRKPEAESEDTVA--YDVTLEEAGFESFIETAKAHRDMYGEKLT 1030

Query: 1024 NLMDYYGIRTEPELVSGNILRVGKSFDKRTD------MEQISHAMRSLRKEARAWFNEKG 1083
            +LM YYG   E E+++G IL+  + +  R +       ++I+ +++ L KEA  WF +  
Sbjct: 1031 SLMIYYGAANEEEILTG-ILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKS- 1090

Query: 1084 SKPRCDDDDNGDEDEEFAKASAWYHVTYHQSYWGRYNEGMERDHFLSFPWCVSDKLIQIK 1100
                C+     DE ++   ASAWY+VTY+       N   E+  FLSFPW V D L+ IK
Sbjct: 1091 ----CE-----DEQQKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIK 1114

BLAST of MC04g1001 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 565.1 bits (1455), Expect = 1.3e-160
Identity = 383/1068 (35.86%), Postives = 566/1068 (53.00%), Query Frame = 0

Query: 98   RMENLTLHLGSQISKEKLSVIWKRENC-----------------SVEFGSGVRKLFVYVN 157
            ++  +TL +G+ +S++   V W+ E                   S  F      +   +N
Sbjct: 131  KLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVIN 190

Query: 158  LEYKMEVWFESILRVQLRCPPDGASKFLLIQLQRAPRIFKKSSSSSSSSSSSSSSRFYFK 217
             +YK+E+    I  V+      G    L++QL  +PR++ +++      +          
Sbjct: 191  CDYKLELLVRDIQTVRQYKTLHGF--VLILQLASSPRVWYRTADDDIYDTVPG------- 250

Query: 218  ESQSSGSRWIRDVDFTPSSCIGQSFALCLELSPGDQ------LPSFFKTLVGYEEIYGPF 277
            +       WIR  DFT    IG+  +  + +SP  +      L  F    V  E +  P 
Sbjct: 251  DLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPP 310

Query: 278  NLETGSSFSS-TSNLVPIVTPPQGFDFSFKILFKINALVQHGYLPGPLLDDEFFRLVDPS 337
             +     F    S+    +   +G   SF+I+F +N+++  G      L + FF L+   
Sbjct: 311  RIRNEPCFGEPVSDHFFCIHHKEG--ISFEIMFLVNSVLHRGVFNQFQLTERFFDLL--- 370

Query: 338  RFRPEYIERA-LEKLFNLKECFYEPQKWLKQQYLSYYNSKQLPWKPDISLDDGLVYVHRV 397
            R +P+ +  A L+ L   K   ++  K LK        + +L    + S D  +  + R+
Sbjct: 371  RNQPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSED--ISEIRRL 430

Query: 398  QITPSKVYFRGPEANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSIDLS--------PR 457
             ITP++ Y   PE  LSNRV+R+Y    + F+RV+F+DE +  I S  LS          
Sbjct: 431  VITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDL 490

Query: 458  TSTANGERTRVYDRILSTLRNGIVIGDKKFEFLAFSASQLRENSVWMFASREGLSAADIR 517
            TS++  ++T V+ R+ S L +G  +  +K+ FLAFSA+QLR+ S W FA       +DI+
Sbjct: 491  TSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIK 550

Query: 518  EWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEIEVITDV-EVETNNVTYCFSDGIG 577
             WMG F+  +NVAK AAR+G  F S+  T+ V  HE++  T+V ++E N   Y FSDGIG
Sbjct: 551  TWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVD--TEVPDIERNG--YVFSDGIG 610

Query: 578  KISETLAEKVAERCGL-INHTPSAFQIRYAGYKGVVAIDPTSEK--KLSLRKSMLKYKSL 637
             I+  LA++V E+  L ++++P A+QIRYAG+KGVVA  P+     +L+LR SM K+ S 
Sbjct: 611  TITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSK 670

Query: 638  DTQLDVLAWSKYLPCFLNRQVINLLSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVL 697
             T L++ +W+++ P FLNRQ+I LLS LG+ D +F   Q+  +Y+LN IL D   A EVL
Sbjct: 671  HTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVL 730

Query: 698  ELMSPGEMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCL 757
                  +  +    +   +KP  EP L  ML + R  +L  LR KSRIFV  GR +MGCL
Sbjct: 731  TASCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCL 790

Query: 758  DETGTLKYGQVFVQCSVP----------GRSSESNF---IPEGKVVVAKNPCLHPGDMRV 817
            DE G L++GQ F+Q S P           R  E+     + +G V +AKNPCLHPGD+R+
Sbjct: 791  DEAGILEHGQCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRI 850

Query: 818  LNAVDVKALHHMVDCVVFPQKGQRPHPNECSGSDLDGDLYFVCWDPELNCIRPVK----P 877
            L AVDV  LHHM DC++FPQKG RPH NE SGSDLDGDLYFV WD +L  I P +     
Sbjct: 851  LEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKL--IPPNRKSYPA 910

Query: 878  MSYKPAPTIQLDHDVTIEEVQEYMANYMVNDGLGAIANAHTVFADREPRKAMSAKCIKLA 937
            M Y  A    L   V  +++ ++ A  + N+ LG I NAH V ADR    AM  +C+ LA
Sbjct: 911  MHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLA 970

Query: 938  KLFSIAVDFPKTGVPANLPPFLRVHEFPDFMEKLDRPAYESKGVIGKLFRSVKDV-SFNT 997
            +L + AVDFPKTG   ++P  L+   +PDFM K D   Y+S  ++G+L+R VK+V   + 
Sbjct: 971  ELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDA 1030

Query: 998  NTIETYTREVAAKCYDPDMEIDGFEKYLNEAFDFKTRYDYKLGNLMDYYGIRTEPELVSG 1057
                  + + +A  YD  +EI GFE  + EA+  K  YD +L  L+  Y ++ E E+V+G
Sbjct: 1031 EASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTG 1090

Query: 1058 NILRVGKSFDKRTD--MEQISHAMRSLRKEARAWFNEKGSKPRCDDDDNGDEDEE----F 1100
            +I  + K   K+     E++ H+  SL+KE R  F E        D +N  E+E+     
Sbjct: 1091 HIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEE-----TIPDHENLSEEEKNILYE 1150

BLAST of MC04g1001 vs. TAIR 10
Match: AT2G19930.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-29
Identity = 179/698 (25.64%), Postives = 279/698 (39.97%), Query Frame = 0

Query: 335 YEPQKW--LKQQYLSYYNSKQLPWKPDISLDDGLVYVHRVQITPSKVY-------FRGPE 394
           YE   W  L + Y    + + L W      D G  + ++  + P+  Y        +GP 
Sbjct: 174 YEAAVWDRLGRHYCPQKDRRMLQW------DSGKTHYYQCNVAPNGSYTFKVLSALQGPL 233

Query: 395 ANLSNRVVRQYSDDIDNFIRVSFVDEELDKIRSIDLSPRTSTANGERTRVYDRILSTLRN 454
              +   + +   D DN + V F           D+   +ST + +    Y  I    +N
Sbjct: 234 LEHTGTHLHKVLGD-DNVLTVKFA----------DVQKSSSTYSIDHYFTYKGI---AKN 293

Query: 455 GIVIGDKKFEFLAFSASQLRENSVWMFASR----------------------EGLSAADI 514
           GI+IG ++++F  F      E    +   +                       G S  + 
Sbjct: 294 GIMIGLRRYQFFVFKDGGKEEKKKDLSTKKVKCYFIRTDSTAFYDMQNPYILTGKSIYEA 353

Query: 515 REWMGDFRQIRNVAKYAARLGQSFGSSRKTLCVEEHEI--EVITDVE---------VETN 574
           R       +   +A Y AR      S  KTL V+   I  + I D+          ++ N
Sbjct: 354 RMHFMHVHRAPTLANYMARFSLIL-SKTKTLEVDMTGITFDQIDDIHCHDQDGKDVLDKN 413

Query: 575 NVTYCFSDGIGKISETLA---------------EKVAERCGLINHTPSAFQIRYAGY--K 634
                 SDG G ISE LA               E + E C         F++ Y GY  K
Sbjct: 414 KKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVK 473

Query: 635 GVVAID-PTSEKKLSLRKSMLKYKSLDTQLDVLAWSKYLPCF----------LNRQVINL 694
           G   ++     + + +R SM+K  S D  L   +    L             L++ ++ L
Sbjct: 474 GTFLLNKKLCPRTVQVRPSMIKV-SKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVAL 533

Query: 695 LSTLGIKDRVFEKKQKEAIYQLNCILKDPSRALEVLELMSPGEMTSV-LKEMLLYYKPNK 754
           LS  GI +  F       + +   I  +   AL     ++ GEM      +M+L   P  
Sbjct: 534 LSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNA--ALNYGEMDDQNAAQMILVGIPLD 593

Query: 755 EPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCLDETGTLKYGQVFVQCSVPGRSSE 814
           EP L   L      +  DL+   ++ V +   +MG +D TG LK  +V V         E
Sbjct: 594 EPHLKNYLSILLKTEKNDLKA-GKLPVTESYYLMGTVDPTGALKEDEVCV-------ILE 653

Query: 815 SNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMVD----CVVFPQKGQRPHPNECSG 874
           S  I  G+V+V +NP LH GD+ +L A  VKAL   V      V FPQKG R   +E +G
Sbjct: 654 SGQI-SGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAG 713

Query: 875 SDLDGDLYFVCWDPE-LNCIRPVKP-MSYKP--------APTIQLDHDVTIEEVQEYM-- 934
            D DGD+YF+  +PE L   +P +P +S  P        AP+ QL  +   EE+ E    
Sbjct: 714 GDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPS-QLSPEELEEELFEMFLT 773

Query: 935 ANYMVNDGLGAIANAHTVFADR---------EPRKAMSAKCIKLAKLFSIAVDFPKTGVP 937
           A +  ++ +G  A++     DR         E +  M  K ++L  ++  A+D PK G  
Sbjct: 774 AGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDK 833

BLAST of MC04g1001 vs. TAIR 10
Match: AT2G19920.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 119.4 bits (298), Expect = 1.8e-26
Identity = 150/593 (25.30%), Postives = 249/593 (41.99%), Query Frame = 0

Query: 436 YDRILSTLRNGIVIGDKKFEFLAF----SASQLRENS---VWMFASREG----------- 495
           Y +     +NGI++G ++++F  F     A + + NS   V  +  R G           
Sbjct: 268 YSKYKEIAKNGIMVGLRRYQFFVFKDGGKAEKKKRNSTKQVKCYFIRTGSTASSDMENPY 327

Query: 496 -LSAADIREWMGDFRQIRNV---AKYAARLGQSFGSSRKTLCVEEHEIEV--ITDVE--- 555
            LS   I E    F  +  +   A Y AR       ++K L V+  EI V  I D+    
Sbjct: 328 ILSGMSIHEARMHFMHVHTLPSPANYMARFSLILSKTKK-LEVDMTEITVMQIDDIHCHD 387

Query: 556 ------VETNNVTYCFSDGIGKISETLA---------------EKVAERCGLINHTPSAF 615
                 ++ N      SDG G ISE LA                 +   C  +   P   
Sbjct: 388 QSNNDVLDKNGKPRIHSDGTGYISEDLARMCPLNIFKGKSMRSNNIQGTC--VQEPPLLI 447

Query: 616 QIRY----AGYKGVVAIDPT-SEKKLSLRKSMLK-YK-------SLDTQLDVLAWSK-YL 675
           QIR     +  KG+  ++     + + +R SM+K YK       S    L+V+  S    
Sbjct: 448 QIRMFNDGSAVKGIFLLNKNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPK 507

Query: 676 PCFLNRQVINLLSTLGIKDRVF-------EKKQKEAIYQLNCILKDPSRALEVLELMSPG 735
              L++ ++ LLS  G+ +  F        +K+K   +++    K    AL    +    
Sbjct: 508 RAKLSKNLVALLSYGGVPNDFFLDILLNTLEKKKTIFFKVRAAGK---AALHYGNMDDKN 567

Query: 736 EMTSVLKEMLLYYKPNKEPFLNMMLRTFRADKLLDLRTKSRIFVPKGRTMMGCLDETGTL 795
            +     +M++   P  EP+L   L      +  DL+   ++ + +   +MG +D TG L
Sbjct: 568 AL-----QMIMAGIPLDEPYLKHYLSKLLKLEKDDLKA-GKLPIDESYYLMGTVDPTGEL 627

Query: 796 KYGQVFVQCSVPGRSSESNFIPEGKVVVAKNPCLHPGDMRVLNAVDVKALHHMVD----C 855
           K  +V            S       V+V +NP LH GD+ +L A  VK+L   V      
Sbjct: 628 KEDEV------------SGLAKSQDVLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYG 687

Query: 856 VVFPQKGQRPHPNECSGSDLDGDLYFVCWDPE-LNCIRPVKP-MSYKPAPTI---QLDHD 915
           V FPQKG R   +E +G D DGD+YF+  +P+ L   +P +P +S  P   I   +   +
Sbjct: 688 VFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHYKPSEPWVSSSPRSKIYTGRQPSE 747

Query: 916 VTIEEVQEYMANYMVNDG------LGAIANAHTVFADR---------EPRKAMSAKCIKL 936
           ++ E+++E +    +  G      +G  A++     DR         + +  M  K +KL
Sbjct: 748 LSPEQLEEELFKIFLKTGFSPSSVIGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKL 807