MC04g0995 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0995
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC04: 17978932 .. 17979135 (+)
RNA-Seq Expression	MC04g0995
Synteny	MC04g0995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGGCGATGGCGATTCCGATGCCCAGGTCCCGGTTCACATCCAAGTCGTCAAGATCAAGAGAGAGATCGAGAAGATCAAGCACCCGTCGCTGCAGCAATCCGAGATGACCACGCATCTTCTTCTTCGCGGGATCTCCATTTCCAAGTCGCGATCGCGCTCGCCCTTAGGCCTCGCCGCCGAGAGGCCTATCTCCGTCGGGAAC

mRNA sequence

GCCGGCGATGGCGATTCCGATGCCCAGGTCCCGGTTCACATCCAAGTCGTCAAGATCAAGAGAGAGATCGAGAAGATCAAGCACCCGTCGCTGCAGCAATCCGAGATGACCACGCATCTTCTTCTTCGCGGGATCTCCATTTCCAAGTCGCGATCGCGCTCGCCCTTAGGCCTCGCCGCCGAGAGGCCTATCTCCGTCGGGAAC

Coding sequence (CDS)

GCCGGCGATGGCGATTCCGATGCCCAGGTCCCGGTTCACATCCAAGTCGTCAAGATCAAGAGAGAGATCGAGAAGATCAAGCACCCGTCGCTGCAGCAATCCGAGATGACCACGCATCTTCTTCTTCGCGGGATCTCCATTTCCAAGTCGCGATCGCGCTCGCCCTTAGGCCTCGCCGCCGAGAGGCCTATCTCCGTCGGGAAC

Protein sequence

AGDGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAERPISVGN

Homology

[Close]

BLAST of MC04g0995 vs. NCBI nr
Match: XP_022146403.1 (uncharacterized protein LOC111015628 [Momordica charantia])

HSP 1 Score: 133 bits (335), Expect = 4.09e-39
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  AGDGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAA 60
          AGDGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAA
Sbjct: 5  AGDGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAA 64

Query: 61 ERPISVGN 68
          ERPISVGN
Sbjct: 65 ERPISVGN 72

[Close]

BLAST of MC04g0995 vs. NCBI nr
Match: XP_038875254.1 (uncharacterized protein LOC120067758 [Benincasa hispida])

HSP 1 Score: 114 bits (285), Expect = 2.01e-31
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1  AGDGDSD-AQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLA 60
          AGD DSD +Q+P+H QV KIK+EIEKIKHPSLQQSEM THLLLRGISISK RSRSPLGLA
Sbjct: 9  AGDSDSDVSQLPIHSQVQKIKKEIEKIKHPSLQQSEMNTHLLLRGISISKPRSRSPLGLA 68

Query: 61 AERPISVGN 68
          AERPISVGN
Sbjct: 69 AERPISVGN 77

[Close]

BLAST of MC04g0995 vs. NCBI nr
Match: XP_023511992.1 (uncharacterized protein LOC111776834 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109 bits (273), Expect = 1.25e-29
Identity = 56/66 (84.85%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 3  DGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAER 62
          DG  D+Q PVHIQVVKIKREIEKIKHPSLQQSEM+THLLLR +SISK R RSPLGLAAER
Sbjct: 9  DGGLDSQAPVHIQVVKIKREIEKIKHPSLQQSEMSTHLLLRDMSISKPRPRSPLGLAAER 68

Query: 63 PISVGN 68
           ISVGN
Sbjct: 69 SISVGN 74

[Close]

BLAST of MC04g0995 vs. NCBI nr
Match: XP_023523054.1 (uncharacterized protein LOC111787191 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108 bits (270), Expect = 3.60e-29
Identity = 55/66 (83.33%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 3  DGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAER 62
          DG  D+Q PVHIQVVKIK+EIEKIKHPSLQQSEM+THLLLR +SISK R RSPLGLAAER
Sbjct: 9  DGGLDSQAPVHIQVVKIKKEIEKIKHPSLQQSEMSTHLLLRDMSISKPRPRSPLGLAAER 68

Query: 63 PISVGN 68
           ISVGN
Sbjct: 69 SISVGN 74

[Close]

BLAST of MC04g0995 vs. NCBI nr
Match: XP_022990554.1 (uncharacterized protein LOC111487401 [Cucurbita maxima])

HSP 1 Score: 107 bits (268), Expect = 5.39e-29
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 7  DAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAERPISV 66
          D+Q PVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLR +SISK R RSPLGLAAER ISV
Sbjct: 2  DSQAPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRDMSISKPRPRSPLGLAAERSISV 61

Query: 67 GN 68
          GN
Sbjct: 62 GN 63

[Close]

BLAST of MC04g0995 vs. ExPASy TrEMBL
Match: A0A6J1CYH4 (uncharacterized protein LOC111015628 OS=Momordica charantia OX=3673 GN=LOC111015628 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 1.98e-39
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  AGDGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAA 60
          AGDGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAA
Sbjct: 5  AGDGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAA 64

Query: 61 ERPISVGN 68
          ERPISVGN
Sbjct: 65 ERPISVGN 72

[Close]

BLAST of MC04g0995 vs. ExPASy TrEMBL
Match: A0A6J1JSC7 (uncharacterized protein LOC111487401 OS=Cucurbita maxima OX=3661 GN=LOC111487401 PE=4 SV=1)

HSP 1 Score: 107 bits (268), Expect = 2.61e-29
Identity = 55/62 (88.71%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 7  DAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAERPISV 66
          D+Q PVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLR +SISK R RSPLGLAAER ISV
Sbjct: 2  DSQAPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRDMSISKPRPRSPLGLAAERSISV 61

Query: 67 GN 68
          GN
Sbjct: 62 GN 63

[Close]

BLAST of MC04g0995 vs. ExPASy TrEMBL
Match: A0A6J1E1V2 (uncharacterized protein LOC111430025 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430025 PE=4 SV=1)

HSP 1 Score: 107 bits (267), Expect = 5.00e-29
Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 3  DGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAER 62
          D   D+Q PVHIQVVKIKREIEKIKHPSLQQSEM+THLLLR +SISK R RSPLGLAAER
Sbjct: 9  DAGLDSQAPVHIQVVKIKREIEKIKHPSLQQSEMSTHLLLRDMSISKPRPRSPLGLAAER 68

Query: 63 PISVGN 68
           ISVGN
Sbjct: 69 SISVGN 74

[Close]

BLAST of MC04g0995 vs. ExPASy TrEMBL
Match: A0A6J1E741 (uncharacterized protein LOC111430025 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430025 PE=4 SV=1)

HSP 1 Score: 106 bits (264), Expect = 1.07e-28
Identity = 54/62 (87.10%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 7  DAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAERPISV 66
          D+Q PVHIQVVKIKREIEKIKHPSLQQSEM+THLLLR +SISK R RSPLGLAAER ISV
Sbjct: 2  DSQAPVHIQVVKIKREIEKIKHPSLQQSEMSTHLLLRDMSISKPRPRSPLGLAAERSISV 61

Query: 67 GN 68
          GN
Sbjct: 62 GN 63

[Close]

BLAST of MC04g0995 vs. ExPASy TrEMBL
Match: A0A5A7TYE7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00850 PE=4 SV=1)

HSP 1 Score: 102 bits (254), Expect = 4.94e-27
Identity = 52/67 (77.61%), Postives = 59/67 (88.06%), Query Frame = 0


Query: 3  DGDSD-AQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAE 62
          D DS+ +QVP+H QV KIK+EIEKIKHPSLQQS+M THLLLRGISISK RSRSPLGL ++
Sbjct: 9  DSDSEVSQVPIHSQVEKIKKEIEKIKHPSLQQSDMNTHLLLRGISISKPRSRSPLGLPSD 68

Query: 63 RPISVGN 68
           PISVGN
Sbjct: 69 TPISVGN 75

[Close]

BLAST of MC04g0995 vs. TAIR 10
Match: AT1G24600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 5.2e-09
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 2  GDGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLA-A 61
          GD   ++   +H QVVKIKRE EKI+HPSL+Q EM   L+ R I +   RSRSPLGL   
Sbjct: 8  GDDVQESVPIIHSQVVKIKREFEKIQHPSLKQPEMP--LVFREI-MGPRRSRSPLGLGER 67

Query: 62 ERPISVGN 69
          ER I VGN
Sbjct: 68 ERSIPVGN 72

[Close]

BLAST of MC04g0995 vs. TAIR 10
Match: AT1G67920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24600.1); Has 22 Blast hits to 22 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 9.9e-08
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 3  DGDSDAQVPVHIQVVKIKREIEKIKHPSLQQSEMTTHLLLRGISISKSRSRSPLGLAAER 62
          +G+ D  + +H QV KIK+E EKI+ PSLQQ EM    +L  I   + RSRSPLGL  ER
Sbjct: 7  NGNEDGPI-IHSQVEKIKKEFEKIRQPSLQQPEM--RRVLSEIK-RRQRSRSPLGL-GER 66

Query: 63 PISVGN 69
           ISVGN
Sbjct: 67 SISVGN 67

The following BLAST results are available for this feature:

BLAST of MC04g0995 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g0995 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146403.1	4.09e-39	100.00	uncharacterized protein LOC111015628 [Momordica charantia]	[more]
XP_038875254.1	2.01e-31	85.51	uncharacterized protein LOC120067758 [Benincasa hispida]	[more]
XP_023511992.1	1.25e-29	84.85	uncharacterized protein LOC111776834 [Cucurbita pepo subsp. pepo]	[more]
XP_023523054.1	3.60e-29	83.33	uncharacterized protein LOC111787191 [Cucurbita pepo subsp. pepo]	[more]
XP_022990554.1	5.39e-29	88.71	uncharacterized protein LOC111487401 [Cucurbita maxima]	[more]

BLAST of MC04g0995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYH4	1.98e-39	100.00	uncharacterized protein LOC111015628 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1JSC7	2.61e-29	88.71	uncharacterized protein LOC111487401 OS=Cucurbita maxima OX=3661 GN=LOC111487401...	[more]
A0A6J1E1V2	5.00e-29	83.33	uncharacterized protein LOC111430025 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E741	1.07e-28	87.10	uncharacterized protein LOC111430025 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7TYE7	4.94e-27	77.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MC04g0995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24600.1	5.2e-09	55.88	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G67920.1	9.9e-08	54.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..68
None	No IPR available	PANTHER	PTHR34780	OS08G0427800 PROTEIN	coord: 3..68
None	No IPR available	PANTHER	PTHR34780:SF2	BNAA07G38580D PROTEIN	coord: 3..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0995.1	MC04g0995.1	mRNA