MC04g0945 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0945
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Histone chaperone
Location	MC04: 17226897 .. 17229579 (-)
RNA-Seq Expression	MC04g0945
Synteny	MC04g0945

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCCGTCAACATCACGAACGTCACCGTTTTGGATAACCCTGCCGCGTTTCTGAATCCATTTCAGTTCGAAATCTCTTACGAGTGCTTGACTCCGCTTAAAGACGGTAATCTTTTTCATTTCGTTAGATCGTATCATGTCATCGCTAATCCATGTTGTTGGACTATGAACGATAGTTTAAACAGTTGCTATTGGGATAATTAGATGTTGGGATGAGTTTTTTTAACCGGATTCATCGGAATAAATTGGAACTGGAAAGGCATTTGAGGGATTGATTTTCGAATAGCTTAAGGTTGAGTTGAAAGGAAGATTGGTCCTTGCGAAATTTGGAGAACACTAAAATTAGATATGTAATTTGATTTTGGAATAGTTTAAACAGTTGATATTGGGATAATTAGATGTTGGCTTCAATATTTTTACCGGATTCGCGGACTAAATTGGAACTGGAAAAGCATTTGAGGGACCGAATAGCTTAAGATTAAGTTGAAAGGAAGATCGGTCCTTGCAAAAGTAGGAGAACCCTAAAATTAGATATGTGATTTGTCCTGTAAAATCGACATTTATGTATTTTTAGTGACTTATCTGCAATAATTTCTTTAGTTACATTTTATGGAAGAAAACTTTATGCCCCTGATATCCTTTATATAGTACGCATTTAAAATTCCGTTGATATCTTGTAACGAAATACTTGTATTCTTATGATGTGCTTTTTCATGCTTAGATTTTAATGCCTGGGCCTTGCCAGTTTCTGCTAGAATTTTGTTCTTTCTACTGATCTGTTCTGAGATCTTCTTTGAGGGGTATTTGTATTTATAGCTGATTTTACCAAAAAGAGTCTCCCTTCTGGGCCCTTAACATTAGTATCCCTAATTCTTCTTTCAAAAGTTGTTAATCTGTGGGTTTGGAACGAGAATTGAAAAAAGTACTTTTTAAATAGAAACACTTCTTCTATAAGTATATTAGGAATAATTACTAATTTTTTTGTTGCCTTTAAGTATATCTTTTTAAGTGATTGTAGACAAAGCAATTTAAAGTATTTGGTAATAAATATAGAGCATTTAAAAAAAATTCAAATTTTTTTAAAACATTATTTTTAAGAAGATGATCTAAAAAGTGAATTTAAAGCGATTGACACCTTTCCCTTGAGAGATAATTATCCAGAAAAAAAGTACTTAAATTTAGTATTCTCATTTCTTTTTCAACTAATATTTATAATTACTTGTCTGGATCGATGTATTCTATTGTGGTTTATGACTAAGTAGTACTACGTTCAGAAACCAACTCTTGTAACATGCTATCTCTTTGATTATTCTATAGATCTGGAATGGAAACTCACCTATGTCGGATCTGCCGAGGATGAAACCTATGACCAACTTTTGGAGAGCGTGCTTGTTGGACCCGTTAATGTTGGCAATTATCGTTTTGTCCTTCAGGTGATATATGCTGAGTTCTTTACCTTCTTTTGGTTCTAAAGAGTTACATATCAATGTTGCCCGAAATATTACAATCTCAAATCTTACAAGTCCCGGTAGAAGTATTAATGAAAATCTGGACGATGAATATGTTAGAATCCCAAATACAAAAACCTAACTAGATAACTATATTGCAATCTCAAACAGAAACTACAACATCGATAGCCTTTTGAGAGGACAATCTCTTTCTCAAAGAACTCTCTCAAGTTCCTCACGCAATACTATTCTGCAATATATGTTTCTCCTCTTCCTACTACCCCTATTTATAACAAACTCACCACAATATAATTATTGTAATGCCCTTAACTACGATACTAATACTATTCTTAAATTAATCCTAATAGGACTCTCACAGAATACTCTAGAAAAGAAAACTAGAGAAACTGATGAAAACAAAAATTATATGTATTAATGAACAAAGTTCTAACATTCTTTAATAGTTGTATAATTCATGGGTTACTAGTCTTTATATTGCAGGACATTGGTATGTTTTAACCCGTAGCCTGTTAACTTAAGATTTTGAAATTTAGTGATAATTTAATATGGTGTCAAGTAGAAAGTTTGTGTTCAAACCCAATTAATATTTCATTCTATTATCTGCAGTCTTGGAATTTAGTAATAGATTTATGTTATCAACATTTACACAACATATGAAAAACAGATACGTCCTCCCATAGATGTCAAACACTTAGATTTATAGTTATATCCGAATCAAATTTCACTCTGTCTTAGACTAATTTCTGCACAAACTGGAATCTGAATGGTCCCTATTGGTTTTGTTGTGGTTGGATATTTTGCAGGCAGACCCTCCAGATCCATCAAAAATCCGGGAGGAAGACATCACAGGGGTGACAGTACTGTTATTAACATGTTCTTACATGGGGCAAGAATTTATAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAACTTCGTGAAGAGCCTCCCCCAAAAGTTCAGATCGATAGGATCCAAAGAAACATTCTGGCTGACAAGCCCAGAGTCACAAAGTTCCCAATCAATTTTCATCCGGAGAACTCTGAAGATGGTGGAGATCAAGGAGAACAACAGTCTTCTCCACCCCACCATTCAGCTGAAACCATCAACAACGAAGAAGAAGGAAACTTGCAGTTGCCACCATCACCATCAGCAGCAGAAGATCCATCTCTGGACGCCATTGATTCTGAACCTCAGCCCTCA

mRNA sequence

ATGAGTGCCGTCAACATCACGAACGTCACCGTTTTGGATAACCCTGCCGCGTTTCTGAATCCATTTCAGTTCGAAATCTCTTACGAGTGCTTGACTCCGCTTAAAGACGATCTGGAATGGAAACTCACCTATGTCGGATCTGCCGAGGATGAAACCTATGACCAACTTTTGGAGAGCGTGCTTGTTGGACCCGTTAATGTTGGCAATTATCGTTTTGTCCTTCAGGCAGACCCTCCAGATCCATCAAAAATCCGGGAGGAAGACATCACAGGGGTGACAGTACTGTTATTAACATGTTCTTACATGGGGCAAGAATTTATAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAACTTCGTGAAGAGCCTCCCCCAAAAGTTCAGATCGATAGGATCCAAAGAAACATTCTGGCTGACAAGCCCAGAGTCACAAAGTTCCCAATCAATTTTCATCCGGAGAACTCTGAAGATGGTGGAGATCAAGGAGAACAACAGTCTTCTCCACCCCACCATTCAGCTGAAACCATCAACAACGAAGAAGAAGGAAACTTGCAGTTGCCACCATCACCATCAGCAGCAGAAGATCCATCTCTGGACGCCATTGATTCTGAACCTCAGCCCTCA

Coding sequence (CDS)

ATGAGTGCCGTCAACATCACGAACGTCACCGTTTTGGATAACCCTGCCGCGTTTCTGAATCCATTTCAGTTCGAAATCTCTTACGAGTGCTTGACTCCGCTTAAAGACGATCTGGAATGGAAACTCACCTATGTCGGATCTGCCGAGGATGAAACCTATGACCAACTTTTGGAGAGCGTGCTTGTTGGACCCGTTAATGTTGGCAATTATCGTTTTGTCCTTCAGGCAGACCCTCCAGATCCATCAAAAATCCGGGAGGAAGACATCACAGGGGTGACAGTACTGTTATTAACATGTTCTTACATGGGGCAAGAATTTATAAGAGTAGGATATTATGTGAACAACGATTATGATGATGAACAACTTCGTGAAGAGCCTCCCCCAAAAGTTCAGATCGATAGGATCCAAAGAAACATTCTGGCTGACAAGCCCAGAGTCACAAAGTTCCCAATCAATTTTCATCCGGAGAACTCTGAAGATGGTGGAGATCAAGGAGAACAACAGTCTTCTCCACCCCACCATTCAGCTGAAACCATCAACAACGAAGAAGAAGGAAACTTGCAGTTGCCACCATCACCATCAGCAGCAGAAGATCCATCTCTGGACGCCATTGATTCTGAACCTCAGCCCTCA

Protein sequence

MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDEQLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETINNEEEGNLQLPPSPSAAEDPSLDAIDSEPQPS

Homology

[Close]

BLAST of MC04g0945 vs. ExPASy Swiss-Prot
Match: Q9LS09 (Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.9e-79
Identity = 147/183 (80.33%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MS++NITNVTVLDNPA F+NPFQFEISYECLT LKDDLEWKL YVGSAEDETYDQ+LESV
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQAD PDP KIREEDI GVTVLLLTCSYM QEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPP KV ID++QRNIL DKPRVTKFPINFHPEN +  GD      +P    A+++ 
Sbjct: 121 QLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGD----GPAPTEPFADSVV 179

Query: 181 NEE 184
           N E
Sbjct: 181 NGE 179

[Close]

BLAST of MC04g0945 vs. ExPASy Swiss-Prot
Match: Q9C9M6 (Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 6.8e-76
Identity = 145/199 (72.86%), Postives = 160/199 (80.40%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSA+ ITNV VL NPA F++PFQFEISYECL  LKDDLEWKL YVGSAEDETYDQLLESV
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFV QADPPDPSKI+EEDI GVTVLLLTCSYMGQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QL+EEPP KV ID++QRNIL+DKPRVTKFPI+FHPE      +Q    ++PP  S E   
Sbjct: 121 QLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEE-----EQTAATAAPPEQSDEQQP 180

Query: 181 NEEEGNLQLPPSPSAAEDP 200
           N   G  Q+ P  S    P
Sbjct: 181 N-VNGEAQVLPDQSVEPKP 193

[Close]

BLAST of MC04g0945 vs. ExPASy Swiss-Prot
Match: Q9V464 (Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.9e-55
Identity = 106/199 (53.27%), Postives = 142/199 (71.36%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           M+ V+ITNV VLDNP++F NPFQFE+++EC+  LK+DLEWK+ YVGSAE E +DQ+L+++
Sbjct: 1   MAKVHITNVVVLDNPSSFFNPFQFELTFECIEELKEDLEWKMIYVGSAESEEHDQVLDTI 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
            VGPV  G + FV QADPPD SKI E D  GVT++LLTCSY GQEF+RVGYYVNNDY D 
Sbjct: 61  YVGPVPEGRHIFVFQADPPDVSKIPEPDAVGVTIVLLTCSYRGQEFVRVGYYVNNDYADP 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINF---HPENSEDGGDQGEQQS------SP 180
           ++RE PP K   +++ RNILA KPRVT+F IN+   H   + +G + G Q        S 
Sbjct: 121 EMRENPPTKPLFEKLTRNILASKPRVTRFKINWDYGHINGNGNGVENGHQDEMATDGPST 180

Query: 181 PHHSAETINNEEEGNLQLP 191
              ++  I+ E++ +L +P
Sbjct: 181 SEAASAVIHPEDDNSLAMP 199

[Close]

BLAST of MC04g0945 vs. ExPASy Swiss-Prot
Match: Q9DAP7 (Histone chaperone ASF1B OS=Mus musculus OX=10090 GN=Asf1b PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-52
Identity = 100/168 (59.52%), Postives = 126/168 (75.00%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           M+ V++ NV VL+NP+ F +PF+FEIS+EC   L DDLEWK+ YVGSAE E +DQ+L+SV
Sbjct: 1   MAKVSVLNVAVLENPSPFHSPFRFEISFECSEALSDDLEWKIIYVGSAESEEFDQILDSV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPV  G + FV QAD P+PS I E D  GVTV+L+TC+Y GQEFIRVGYYVNN+Y D 
Sbjct: 61  LVGPVPAGRHMFVFQADAPNPSLIPETDAVGVTVVLITCTYHGQEFIRVGYYVNNEYPDP 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQ 169
           +LRE PPPK    ++QRNILA  PRVT+F IN+  +N+ D  +  E Q
Sbjct: 121 ELRENPPPKPDFSQLQRNILASNPRVTRFHINW--DNNPDSLEAIENQ 166

[Close]

BLAST of MC04g0945 vs. ExPASy Swiss-Prot
Match: Q9Y294 (Histone chaperone ASF1A OS=Homo sapiens OX=9606 GN=ASF1A PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.3e-52
Identity = 96/159 (60.38%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           M+ V + NV VLDNP+ F NPFQFEI++EC+  L +DLEWK+ YVGSAE E YDQ+L+SV
Sbjct: 1   MAKVQVNNVVVLDNPSPFYNPFQFEITFECIEDLSEDLEWKIIYVGSAESEEYDQVLDSV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPV  G + FV QAD P+P  I + D  GVTV+L+TC+Y GQEFIRVGYYVNN+Y + 
Sbjct: 61  LVGPVPAGRHMFVFQADAPNPGLIPDADAVGVTVVLITCTYRGQEFIRVGYYVNNEYTET 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSE 160
           +LRE PP K    ++QRNILA  PRVT+F IN+  +N+E
Sbjct: 121 ELRENPPVKPDFSKLQRNILASNPRVTRFHINWE-DNTE 158

[Close]

BLAST of MC04g0945 vs. NCBI nr
Match: XP_022152274.1 (histone chaperone ASF1B-like [Momordica charantia])

HSP 1 Score: 423 bits (1087), Expect = 3.63e-149
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN
Sbjct: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180

Query: 181 NEEEGNLQLPPSPSAAEDPSLDAIDSEPQPS 211
           NEEEGNLQLPPSPSAAEDPSLDAIDSEPQPS
Sbjct: 181 NEEEGNLQLPPSPSAAEDPSLDAIDSEPQPS 211

[Close]

BLAST of MC04g0945 vs. NCBI nr
Match: XP_038875350.1 (probable histone chaperone ASF1A [Benincasa hispida])

HSP 1 Score: 370 bits (950), Expect = 2.41e-128
Identity = 192/213 (90.14%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKV IDRIQRNILADKPRVTKFPINFHPENSE G    EQQ S PHHS E +N
Sbjct: 121 QLREEPPPKVLIDRIQRNILADKPRVTKFPINFHPENSEHGA---EQQPSSPHHSGEALN 180

Query: 181 NEEEGNLQLPPSPSAAEDPSLD--AIDSEPQPS 211
           NEEE  LQ PPSPS A++PSLD  AIDS PQPS
Sbjct: 181 NEEE-ELQPPPSPSPADEPSLDQEAIDSGPQPS 209

[Close]

BLAST of MC04g0945 vs. NCBI nr
Match: XP_008467163.1 (PREDICTED: probable histone chaperone ASF1A [Cucumis melo] >KAA0046301.1 putative histone chaperone ASF1A [Cucumis melo var. makuwa] >TYK30466.1 putative histone chaperone ASF1A [Cucumis melo var. makuwa])

HSP 1 Score: 368 bits (945), Expect = 1.35e-127
Identity = 191/213 (89.67%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKV IDR+QRNILADKPRVTKFPINFHPENSE G    EQQ S PHHSAE +N
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGA---EQQPSSPHHSAEALN 180

Query: 181 NEEEGNLQLPPSPSAAEDPSLD--AIDSEPQPS 211
           NEEE  LQ PPS SAA++P LD  AIDS PQPS
Sbjct: 181 NEEE--LQPPPSASAADEPPLDQEAIDSGPQPS 208

[Close]

BLAST of MC04g0945 vs. NCBI nr
Match: XP_004150672.1 (probable histone chaperone ASF1A [Cucumis sativus] >KGN51521.1 hypothetical protein Csa_008063 [Cucumis sativus])

HSP 1 Score: 363 bits (932), Expect = 1.33e-125
Identity = 188/213 (88.26%), Postives = 194/213 (91.08%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKV IDR+QRNILADKPRVTKFPINFHPENSE G    EQQ S PHHS E +N
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGA---EQQPSSPHHSVEALN 180

Query: 181 NEEEGNLQLPPSPSAAEDPSLD--AIDSEPQPS 211
           NEEE  LQ PPSPSAA++P LD  AIDS  QPS
Sbjct: 181 NEEE-ELQPPPSPSAADEPPLDKEAIDSGSQPS 209

[Close]

BLAST of MC04g0945 vs. NCBI nr
Match: XP_022989985.1 (probable histone chaperone ASF1A [Cucurbita maxima])

HSP 1 Score: 353 bits (907), Expect = 1.31e-121
Identity = 188/224 (83.93%), Postives = 195/224 (87.05%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKV ++RIQRNILADKPRVTKFPINFHPENSE GG   E  SSPP   AETIN
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGG---EPNSSPP---AETIN 180

Query: 181 NEEEGNLQLPPSPS-----------AAEDPSL--DAIDSEPQPS 211
           NEEE  LQ  P PS           A+++PSL  DA+D+E QPS
Sbjct: 181 NEEEEELQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPS 218

[Close]

BLAST of MC04g0945 vs. ExPASy TrEMBL
Match: A0A6J1DFK2 (histone chaperone ASF1B-like OS=Momordica charantia OX=3673 GN=LOC111020036 PE=3 SV=1)

HSP 1 Score: 423 bits (1087), Expect = 1.76e-149
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN
Sbjct: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180

Query: 181 NEEEGNLQLPPSPSAAEDPSLDAIDSEPQPS 211
           NEEEGNLQLPPSPSAAEDPSLDAIDSEPQPS
Sbjct: 181 NEEEGNLQLPPSPSAAEDPSLDAIDSEPQPS 211

[Close]

BLAST of MC04g0945 vs. ExPASy TrEMBL
Match: A0A5A7TY70 (Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00060 PE=3 SV=1)

HSP 1 Score: 368 bits (945), Expect = 6.51e-128
Identity = 191/213 (89.67%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKV IDR+QRNILADKPRVTKFPINFHPENSE G    EQQ S PHHSAE +N
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGA---EQQPSSPHHSAEALN 180

Query: 181 NEEEGNLQLPPSPSAAEDPSLD--AIDSEPQPS 211
           NEEE  LQ PPS SAA++P LD  AIDS PQPS
Sbjct: 181 NEEE--LQPPPSASAADEPPLDQEAIDSGPQPS 208

[Close]

BLAST of MC04g0945 vs. ExPASy TrEMBL
Match: A0A1S3CSW5 (probable histone chaperone ASF1A OS=Cucumis melo OX=3656 GN=LOC103504582 PE=3 SV=1)

HSP 1 Score: 368 bits (945), Expect = 6.51e-128
Identity = 191/213 (89.67%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKV IDR+QRNILADKPRVTKFPINFHPENSE G    EQQ S PHHSAE +N
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGA---EQQPSSPHHSAEALN 180

Query: 181 NEEEGNLQLPPSPSAAEDPSLD--AIDSEPQPS 211
           NEEE  LQ PPS SAA++P LD  AIDS PQPS
Sbjct: 181 NEEE--LQPPPSASAADEPPLDQEAIDSGPQPS 208

[Close]

BLAST of MC04g0945 vs. ExPASy TrEMBL
Match: A0A0A0KUZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576630 PE=3 SV=1)

HSP 1 Score: 363 bits (932), Expect = 6.46e-126
Identity = 188/213 (88.26%), Postives = 194/213 (91.08%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLT LKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTSLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGP+NVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEF+RVGYYVNNDYDDE
Sbjct: 61  LVGPINVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFVRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKV IDR+QRNILADKPRVTKFPINFHPENSE G    EQQ S PHHS E +N
Sbjct: 121 QLREEPPPKVLIDRVQRNILADKPRVTKFPINFHPENSEHGA---EQQPSSPHHSVEALN 180

Query: 181 NEEEGNLQLPPSPSAAEDPSLD--AIDSEPQPS 211
           NEEE  LQ PPSPSAA++P LD  AIDS  QPS
Sbjct: 181 NEEE-ELQPPPSPSAADEPPLDKEAIDSGSQPS 209

[Close]

BLAST of MC04g0945 vs. ExPASy TrEMBL
Match: A0A6J1JNV5 (probable histone chaperone ASF1A OS=Cucurbita maxima OX=3661 GN=LOC111487014 PE=3 SV=1)

HSP 1 Score: 353 bits (907), Expect = 6.36e-122
Identity = 188/224 (83.93%), Postives = 195/224 (87.05%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV
Sbjct: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPPPKV ++RIQRNILADKPRVTKFPINFHPENSE GG   E  SSPP   AETIN
Sbjct: 121 QLREEPPPKVLVERIQRNILADKPRVTKFPINFHPENSEHGG---EPNSSPP---AETIN 180

Query: 181 NEEEGNLQLPPSPS-----------AAEDPSL--DAIDSEPQPS 211
           NEEE  LQ  P PS           A+++PSL  DA+D+E QPS
Sbjct: 181 NEEEEELQASPLPSPLPSPSPPPSAASDEPSLEQDAVDTEAQPS 218

[Close]

BLAST of MC04g0945 vs. TAIR 10
Match: AT5G38110.1 (anti- silencing function 1b )

HSP 1 Score: 296.2 bits (757), Expect = 2.1e-80
Identity = 147/183 (80.33%), Postives = 158/183 (86.34%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MS++NITNVTVLDNPA F+NPFQFEISYECLT LKDDLEWKL YVGSAEDETYDQ+LESV
Sbjct: 1   MSSINITNVTVLDNPAPFVNPFQFEISYECLTSLKDDLEWKLIYVGSAEDETYDQVLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFVLQAD PDP KIREEDI GVTVLLLTCSYM QEFIRVGYYVNNDYDDE
Sbjct: 61  LVGPVNVGNYRFVLQADSPDPLKIREEDIIGVTVLLLTCSYMDQEFIRVGYYVNNDYDDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QLREEPP KV ID++QRNIL DKPRVTKFPINFHPEN +  GD      +P    A+++ 
Sbjct: 121 QLREEPPTKVLIDKVQRNILTDKPRVTKFPINFHPENEQTLGD----GPAPTEPFADSVV 179

Query: 181 NEE 184
           N E
Sbjct: 181 NGE 179

[Close]

BLAST of MC04g0945 vs. TAIR 10
Match: AT1G66740.1 (ASF1 like histone chaperone )

HSP 1 Score: 285.0 bits (728), Expect = 4.8e-77
Identity = 145/199 (72.86%), Postives = 160/199 (80.40%), Query Frame = 0


Query: 1   MSAVNITNVTVLDNPAAFLNPFQFEISYECLTPLKDDLEWKLTYVGSAEDETYDQLLESV 60
           MSA+ ITNV VL NPA F++PFQFEISYECL  LKDDLEWKL YVGSAEDETYDQLLESV
Sbjct: 1   MSAIKITNVAVLHNPAPFVSPFQFEISYECLNSLKDDLEWKLIYVGSAEDETYDQLLESV 60

Query: 61  LVGPVNVGNYRFVLQADPPDPSKIREEDITGVTVLLLTCSYMGQEFIRVGYYVNNDYDDE 120
           LVGPVNVGNYRFV QADPPDPSKI+EEDI GVTVLLLTCSYMGQEF+RVGYYVNNDY+DE
Sbjct: 61  LVGPVNVGNYRFVFQADPPDPSKIQEEDIIGVTVLLLTCSYMGQEFLRVGYYVNNDYEDE 120

Query: 121 QLREEPPPKVQIDRIQRNILADKPRVTKFPINFHPENSEDGGDQGEQQSSPPHHSAETIN 180
           QL+EEPP KV ID++QRNIL+DKPRVTKFPI+FHPE      +Q    ++PP  S E   
Sbjct: 121 QLKEEPPTKVLIDKVQRNILSDKPRVTKFPIDFHPEE-----EQTAATAAPPEQSDEQQP 180

Query: 181 NEEEGNLQLPPSPSAAEDP 200
           N   G  Q+ P  S    P
Sbjct: 181 N-VNGEAQVLPDQSVEPKP 193

The following BLAST results are available for this feature:

BLAST of MC04g0945 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS09	2.9e-79	80.33	Histone chaperone ASF1B OS=Arabidopsis thaliana OX=3702 GN=ASF1B PE=1 SV=1	[more]
Q9C9M6	6.8e-76	72.86	Probable histone chaperone ASF1A OS=Arabidopsis thaliana OX=3702 GN=ASF1A PE=1 S...	[more]
Q9V464	3.9e-55	53.27	Histone chaperone asf1 OS=Drosophila melanogaster OX=7227 GN=asf1 PE=1 SV=1	[more]
Q9DAP7	1.8e-52	59.52	Histone chaperone ASF1B OS=Mus musculus OX=10090 GN=Asf1b PE=1 SV=1	[more]
Q9Y294	2.3e-52	60.38	Histone chaperone ASF1A OS=Homo sapiens OX=9606 GN=ASF1A PE=1 SV=1	[more]

BLAST of MC04g0945 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152274.1	3.63e-149	100.00	histone chaperone ASF1B-like [Momordica charantia]	[more]
XP_038875350.1	2.41e-128	90.14	probable histone chaperone ASF1A [Benincasa hispida]	[more]
XP_008467163.1	1.35e-127	89.67	PREDICTED: probable histone chaperone ASF1A [Cucumis melo] >KAA0046301.1 putativ...	[more]
XP_004150672.1	1.33e-125	88.26	probable histone chaperone ASF1A [Cucumis sativus] >KGN51521.1 hypothetical prot...	[more]
XP_022989985.1	1.31e-121	83.93	probable histone chaperone ASF1A [Cucurbita maxima]	[more]

BLAST of MC04g0945 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFK2	1.76e-149	100.00	histone chaperone ASF1B-like OS=Momordica charantia OX=3673 GN=LOC111020036 PE=3...	[more]
A0A5A7TY70	6.51e-128	89.67	Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CSW5	6.51e-128	89.67	probable histone chaperone ASF1A OS=Cucumis melo OX=3656 GN=LOC103504582 PE=3 SV...	[more]
A0A0A0KUZ5	6.46e-126	88.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576630 PE=3 SV=1	[more]
A0A6J1JNV5	6.36e-122	83.93	probable histone chaperone ASF1A OS=Cucurbita maxima OX=3661 GN=LOC111487014 PE=...	[more]

BLAST of MC04g0945 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38110.1	2.1e-80	80.33	anti- silencing function 1b	[more]
AT1G66740.1	4.8e-77	72.86	ASF1 like histone chaperone	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006818	Histone chaperone ASF1-like	PFAM	PF04729	ASF1_hist_chap	coord: 1..153 e-value: 2.3E-70 score: 235.4
IPR006818	Histone chaperone ASF1-like	PANTHER	PTHR12040	ANTI-SILENCING PROTEIN 1	coord: 1..187
IPR036747	Histone chaperone ASF1-like superfamily	GENE3D	2.60.40.1490		coord: 1..157 e-value: 7.2E-77 score: 258.5
IPR036747	Histone chaperone ASF1-like superfamily	SUPERFAMILY	101546	ASF1-like	coord: 1..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..188
None	No IPR available	PANTHER	PTHR12040:SF18	HISTONE CHAPERONE ASF1B-RELATED	coord: 1..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0945.1	MC04g0945.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006335	DNA replication-dependent chromatin assembly
biological_process	GO:0006336	DNA replication-independent chromatin assembly
biological_process	GO:0006333	chromatin assembly or disassembly
cellular_component	GO:0005634	nucleus
molecular_function	GO:0042393	histone binding