MC04g0940 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0940
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	(R)-mandelonitrile lyase-like
Location	MC04: 17179286 .. 17179513 (+)
RNA-Seq Expression	MC04g0940
Synteny	MC04g0940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGTGGGGCCTGCATTGCCCGTTGATCAATCAAATGATCGGCTGATGGGAGAGTTTTGCCGTCTCACAGTGAGTACTATATGGCACTACCATGGTGGATGCCTTGTGGGCAAGGTAGTTGATCGCAATTTCAGGGTTATTGGGATTGATGCTCTCCGAGTCGTTGATGGTTCGATATTCACTGTATCACCAGGGACCAATCCCCAGTCCCCTCTTTTGATGCTTGGA

mRNA sequence

TACGTGGGGCCTGCATTGCCCGTTGATCAATCAAATGATCGGCTGATGGGAGAGTTTTGCCGTCTCACAGTGAGTACTATATGGCACTACCATGGTGGATGCCTTGTGGGCAAGGTAGTTGATCGCAATTTCAGGGTTATTGGGATTGATGCTCTCCGAGTCGTTGATGGTTCGATATTCACTGTATCACCAGGGACCAATCCCCAGTCCCCTCTTTTGATGCTTGGA

Coding sequence (CDS)

TACGTGGGGCCTGCATTGCCCGTTGATCAATCAAATGATCGGCTGATGGGAGAGTTTTGCCGTCTCACAGTGAGTACTATATGGCACTACCATGGTGGATGCCTTGTGGGCAAGGTAGTTGATCGCAATTTCAGGGTTATTGGGATTGATGCTCTCCGAGTCGTTGATGGTTCGATATTCACTGTATCACCAGGGACCAATCCCCAGTCCCCTCTTTTGATGCTTGGA

Protein sequence

YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG

Homology

[Close]

BLAST of MC04g0940 vs. ExPASy Swiss-Prot
Match: Q9SSM2 ((R)-mandelonitrile lyase-like OS=Arabidopsis thaliana OX=3702 GN=At1g73050 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.7e-27
Identity = 52/76 (68.42%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           +VG  LPVDQSND +M +FCR TVSTIWHYHGG +VGKVVD + +VIG+++LR+VDGS F
Sbjct: 464 FVGAPLPVDQSNDLVMADFCRRTVSTIWHYHGGAVVGKVVDSDLKVIGVNSLRLVDGSTF 523

Query: 61  TVSPGTNPQSPLLMLG 77
            +SPGTNPQ+ L+MLG
Sbjct: 524 NISPGTNPQATLMMLG 539

[Close]

BLAST of MC04g0940 vs. ExPASy Swiss-Prot
Match: P52706 ((R)-mandelonitrile lyase 1 OS=Prunus serotina OX=23207 GN=MDL1 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 2   VGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFT 61
           +G  LP DQ++D     FCR +V++ WHYHGGCLVGKV+D +FRV GIDALRVVDGS F 
Sbjct: 459 LGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGIDALRVVDGSTFP 518

Query: 62  VSPGTNPQSPLLMLG 77
            +P ++PQ   LMLG
Sbjct: 519 YTPASHPQGFYLMLG 533

[Close]

BLAST of MC04g0940 vs. ExPASy Swiss-Prot
Match: Q9S746 (Protein HOTHEAD OS=Arabidopsis thaliana OX=3702 GN=HTH PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.2e-20
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 7   PVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGT 66
           P   ++ + M +FC+ TV TIWHYHGGCLVGKVV  N +V+G+D LRV+DGS F  SPGT
Sbjct: 507 PKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGT 566

Query: 67  NPQSPLLMLG 77
           NPQ+ ++M+G
Sbjct: 567 NPQATMMMMG 576

[Close]

BLAST of MC04g0940 vs. ExPASy Swiss-Prot
Match: Q945K2 ((R)-mandelonitrile lyase 2 OS=Prunus dulcis OX=3755 GN=MDL2 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.2e-20
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 2   VGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFT 61
           +G  LP DQ++D     FCR +V++ WHYHGGCLVGKV+D +FRV GI+ALRVVDGS F 
Sbjct: 459 LGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGSTFP 518

Query: 62  VSPGTNPQSPLLMLG 77
            +P ++PQ   LMLG
Sbjct: 519 YTPASHPQGFYLMLG 533

[Close]

BLAST of MC04g0940 vs. ExPASy Swiss-Prot
Match: O82784 ((R)-mandelonitrile lyase 4 OS=Prunus serotina OX=23207 GN=MDL4 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.5e-20
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 2   VGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFT 61
           +G  LP +Q++D    +FCR TV++ WHYHGG +VGKV+D NFRV GI+ALRVVDGS F 
Sbjct: 461 LGTPLPENQTDDAAFEKFCRDTVASYWHYHGGAIVGKVIDGNFRVTGINALRVVDGSTFP 520

Query: 62  VSPGTNPQSPLLMLG 77
            +P ++PQ   LMLG
Sbjct: 521 ATPASHPQGFYLMLG 535

[Close]

BLAST of MC04g0940 vs. NCBI nr
Match: KAA8541557.1 (hypothetical protein F0562_022709 [Nyssa sinensis])

HSP 1 Score: 150 bits (380), Expect = 5.77e-41
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           YVGPALPVDQSND LMGEFCR TVSTIWHYHGGCLVGKVVDRNFRVIGID+LR+VDGS F
Sbjct: 465 YVGPALPVDQSNDLLMGEFCRRTVSTIWHYHGGCLVGKVVDRNFRVIGIDSLRIVDGSTF 524

Query: 61  TVSPGTNPQSPLLMLG 76
           TVSPGTNPQ+ LLMLG
Sbjct: 525 TVSPGTNPQATLLMLG 540

[Close]

BLAST of MC04g0940 vs. NCBI nr
Match: XP_027168687.1 ((R)-mandelonitrile lyase-like [Coffea eugenioides])

HSP 1 Score: 147 bits (372), Expect = 5.06e-40
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           Y+GP LPVD SNDRLMGEFCR TV+TIWHYHGGCLVGKVVDRNFRV+GI ALRVVDGSIF
Sbjct: 426 YIGPPLPVDLSNDRLMGEFCRRTVNTIWHYHGGCLVGKVVDRNFRVLGIQALRVVDGSIF 485

Query: 61  TVSPGTNPQSPLLMLG 76
           TVSPGTNPQ+ LLMLG
Sbjct: 486 TVSPGTNPQATLLMLG 501

[Close]

BLAST of MC04g0940 vs. NCBI nr
Match: XP_027122611.1 ((R)-mandelonitrile lyase-like [Coffea arabica] >XP_027126715.1 (R)-mandelonitrile lyase-like [Coffea arabica] >CDO97767.1 unnamed protein product [Coffea canephora])

HSP 1 Score: 147 bits (372), Expect = 7.68e-40
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           Y+GP LPVD SNDRLMGEFCR TV+TIWHYHGGCLVGKVVDRNFRV+GI ALRVVDGSIF
Sbjct: 460 YIGPPLPVDLSNDRLMGEFCRRTVNTIWHYHGGCLVGKVVDRNFRVLGIQALRVVDGSIF 519

Query: 61  TVSPGTNPQSPLLMLG 76
           TVSPGTNPQ+ LLMLG
Sbjct: 520 TVSPGTNPQATLLMLG 535

[Close]

BLAST of MC04g0940 vs. NCBI nr
Match: PSS07264.1 ((R)-mandelonitrile lyase-like [Actinidia chinensis var. chinensis])

HSP 1 Score: 141 bits (356), Expect = 1.23e-39
Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           YVGPALPVDQSND LMG+FCR TVSTIWHYHGGCLVGKVVDR FRVIGI +LRVVDGS F
Sbjct: 187 YVGPALPVDQSNDLLMGDFCRRTVSTIWHYHGGCLVGKVVDRRFRVIGIGSLRVVDGSTF 246

Query: 61  TVSPGTNPQSPLLMLG 76
            VSPGTNPQ+ +LMLG
Sbjct: 247 PVSPGTNPQATVLMLG 262

[Close]

BLAST of MC04g0940 vs. NCBI nr
Match: THG00223.1 (hypothetical protein TEA_020656 [Camellia sinensis var. sinensis])

HSP 1 Score: 142 bits (357), Expect = 1.09e-37
Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           +VGPALPVDQSND LMGEFCR TVSTIWHYHGGCLVGKVVDR+ RVIGID LRVVDGS F
Sbjct: 450 FVGPALPVDQSNDVLMGEFCRRTVSTIWHYHGGCLVGKVVDRHLRVIGIDGLRVVDGSTF 509

Query: 61  TVSPGTNPQSPLLMLG 76
           T SPGTNPQ+ +LMLG
Sbjct: 510 TTSPGTNPQATVLMLG 525

[Close]

BLAST of MC04g0940 vs. ExPASy TrEMBL
Match: A0A5J5BIC5 (GMC_OxRdtase_N domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_022709 PE=3 SV=1)

HSP 1 Score: 150 bits (380), Expect = 2.79e-41
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           YVGPALPVDQSND LMGEFCR TVSTIWHYHGGCLVGKVVDRNFRVIGID+LR+VDGS F
Sbjct: 465 YVGPALPVDQSNDLLMGEFCRRTVSTIWHYHGGCLVGKVVDRNFRVIGIDSLRIVDGSTF 524

Query: 61  TVSPGTNPQSPLLMLG 76
           TVSPGTNPQ+ LLMLG
Sbjct: 525 TVSPGTNPQATLLMLG 540

[Close]

BLAST of MC04g0940 vs. ExPASy TrEMBL
Match: A0A6P6X6P1 ((R)-mandelonitrile lyase-like OS=Coffea arabica OX=13443 GN=LOC113739561 PE=3 SV=1)

HSP 1 Score: 147 bits (372), Expect = 3.72e-40
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           Y+GP LPVD SNDRLMGEFCR TV+TIWHYHGGCLVGKVVDRNFRV+GI ALRVVDGSIF
Sbjct: 460 YIGPPLPVDLSNDRLMGEFCRRTVNTIWHYHGGCLVGKVVDRNFRVLGIQALRVVDGSIF 519

Query: 61  TVSPGTNPQSPLLMLG 76
           TVSPGTNPQ+ LLMLG
Sbjct: 520 TVSPGTNPQATLLMLG 535

[Close]

BLAST of MC04g0940 vs. ExPASy TrEMBL
Match: A0A068TP29 (GMC_OxRdtase_N domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T00021661001 PE=3 SV=1)

HSP 1 Score: 147 bits (372), Expect = 3.72e-40
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           Y+GP LPVD SNDRLMGEFCR TV+TIWHYHGGCLVGKVVDRNFRV+GI ALRVVDGSIF
Sbjct: 460 YIGPPLPVDLSNDRLMGEFCRRTVNTIWHYHGGCLVGKVVDRNFRVLGIQALRVVDGSIF 519

Query: 61  TVSPGTNPQSPLLMLG 76
           TVSPGTNPQ+ LLMLG
Sbjct: 520 TVSPGTNPQATLLMLG 535

[Close]

BLAST of MC04g0940 vs. ExPASy TrEMBL
Match: A0A2R6QF72 ((R)-mandelonitrile lyase-like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17603 PE=4 SV=1)

HSP 1 Score: 141 bits (356), Expect = 5.95e-40
Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           YVGPALPVDQSND LMG+FCR TVSTIWHYHGGCLVGKVVDR FRVIGI +LRVVDGS F
Sbjct: 187 YVGPALPVDQSNDLLMGDFCRRTVSTIWHYHGGCLVGKVVDRRFRVIGIGSLRVVDGSTF 246

Query: 61  TVSPGTNPQSPLLMLG 76
            VSPGTNPQ+ +LMLG
Sbjct: 247 PVSPGTNPQATVLMLG 262

[Close]

BLAST of MC04g0940 vs. ExPASy TrEMBL
Match: A0A4S4DCA1 (GMC_OxRdtase_N domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_020656 PE=3 SV=1)

HSP 1 Score: 142 bits (357), Expect = 5.29e-38
Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           +VGPALPVDQSND LMGEFCR TVSTIWHYHGGCLVGKVVDR+ RVIGID LRVVDGS F
Sbjct: 450 FVGPALPVDQSNDVLMGEFCRRTVSTIWHYHGGCLVGKVVDRHLRVIGIDGLRVVDGSTF 509

Query: 61  TVSPGTNPQSPLLMLG 76
           T SPGTNPQ+ +LMLG
Sbjct: 510 TTSPGTNPQATVLMLG 525

[Close]

BLAST of MC04g0940 vs. TAIR 10
Match: AT1G73050.1 (Glucose-methanol-choline (GMC) oxidoreductase family protein )

HSP 1 Score: 122.1 bits (305), Expect = 1.9e-28
Identity = 52/76 (68.42%), Postives = 65/76 (85.53%), Query Frame = 0


Query: 1   YVGPALPVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIF 60
           +VG  LPVDQSND +M +FCR TVSTIWHYHGG +VGKVVD + +VIG+++LR+VDGS F
Sbjct: 464 FVGAPLPVDQSNDLVMADFCRRTVSTIWHYHGGAVVGKVVDSDLKVIGVNSLRLVDGSTF 523

Query: 61  TVSPGTNPQSPLLMLG 77
            +SPGTNPQ+ L+MLG
Sbjct: 524 NISPGTNPQATLMMLG 539

[Close]

BLAST of MC04g0940 vs. TAIR 10
Match: AT1G72970.1 (Glucose-methanol-choline (GMC) oxidoreductase family protein )

HSP 1 Score: 98.6 bits (244), Expect = 2.3e-21
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 7   PVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGT 66
           P   ++ + M +FC+ TV TIWHYHGGCLVGKVV  N +V+G+D LRV+DGS F  SPGT
Sbjct: 507 PKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGT 566

Query: 67  NPQSPLLMLG 77
           NPQ+ ++M+G
Sbjct: 567 NPQATMMMMG 576

[Close]

BLAST of MC04g0940 vs. TAIR 10
Match: AT1G72970.2 (Glucose-methanol-choline (GMC) oxidoreductase family protein )

HSP 1 Score: 98.6 bits (244), Expect = 2.3e-21
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 7   PVDQSNDRLMGEFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGT 66
           P   ++ + M +FC+ TV TIWHYHGGCLVGKVV  N +V+G+D LRV+DGS F  SPGT
Sbjct: 480 PKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGT 539

Query: 67  NPQSPLLMLG 77
           NPQ+ ++M+G
Sbjct: 540 NPQATMMMMG 549

[Close]

BLAST of MC04g0940 vs. TAIR 10
Match: AT5G51950.1 (Glucose-methanol-choline (GMC) oxidoreductase family protein )

HSP 1 Score: 97.8 bits (242), Expect = 3.9e-21
Identity = 41/59 (69.49%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 18  EFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG 77
           +FC  TV TIWHYHGGC VG+VVD+N+RV+GID+LRV+DGS F  SPGTNPQ+ ++MLG
Sbjct: 507 QFCIDTVMTIWHYHGGCQVGRVVDKNYRVLGIDSLRVIDGSTFLKSPGTNPQATVMMLG 565

[Close]

BLAST of MC04g0940 vs. TAIR 10
Match: AT5G51950.2 (Glucose-methanol-choline (GMC) oxidoreductase family protein )

HSP 1 Score: 97.8 bits (242), Expect = 3.9e-21
Identity = 41/59 (69.49%), Postives = 51/59 (86.44%), Query Frame = 0


Query: 18  EFCRLTVSTIWHYHGGCLVGKVVDRNFRVIGIDALRVVDGSIFTVSPGTNPQSPLLMLG 77
           +FC  TV TIWHYHGGC VG+VVD+N+RV+GID+LRV+DGS F  SPGTNPQ+ ++MLG
Sbjct: 474 QFCIDTVMTIWHYHGGCQVGRVVDKNYRVLGIDSLRVIDGSTFLKSPGTNPQATVMMLG 532

The following BLAST results are available for this feature:

BLAST of MC04g0940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSM2	2.7e-27	68.42	(R)-mandelonitrile lyase-like OS=Arabidopsis thaliana OX=3702 GN=At1g73050 PE=2 ...	[more]
P52706	1.1e-20	60.00	(R)-mandelonitrile lyase 1 OS=Prunus serotina OX=23207 GN=MDL1 PE=1 SV=1	[more]
Q9S746	3.2e-20	58.57	Protein HOTHEAD OS=Arabidopsis thaliana OX=3702 GN=HTH PE=1 SV=1	[more]
Q945K2	4.2e-20	58.67	(R)-mandelonitrile lyase 2 OS=Prunus dulcis OX=3755 GN=MDL2 PE=1 SV=1	[more]
O82784	5.5e-20	57.33	(R)-mandelonitrile lyase 4 OS=Prunus serotina OX=23207 GN=MDL4 PE=2 SV=1	[more]

BLAST of MC04g0940 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA8541557.1	5.77e-41	90.79	hypothetical protein F0562_022709 [Nyssa sinensis]	[more]
XP_027168687.1	5.06e-40	88.16	(R)-mandelonitrile lyase-like [Coffea eugenioides]	[more]
XP_027122611.1	7.68e-40	88.16	(R)-mandelonitrile lyase-like [Coffea arabica] >XP_027126715.1 (R)-mandelonitril...	[more]
PSS07264.1	1.23e-39	85.53	(R)-mandelonitrile lyase-like [Actinidia chinensis var. chinensis]	[more]
THG00223.1	1.09e-37	85.53	hypothetical protein TEA_020656 [Camellia sinensis var. sinensis]	[more]

BLAST of MC04g0940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5J5BIC5	2.79e-41	90.79	GMC_OxRdtase_N domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_02...	[more]
A0A6P6X6P1	3.72e-40	88.16	(R)-mandelonitrile lyase-like OS=Coffea arabica OX=13443 GN=LOC113739561 PE=3 SV...	[more]
A0A068TP29	3.72e-40	88.16	GMC_OxRdtase_N domain-containing protein OS=Coffea canephora OX=49390 GN=GSCOC_T...	[more]
A0A2R6QF72	5.95e-40	85.53	(R)-mandelonitrile lyase-like OS=Actinidia chinensis var. chinensis OX=1590841 G...	[more]
A0A4S4DCA1	5.29e-38	85.53	GMC_OxRdtase_N domain-containing protein OS=Camellia sinensis var. sinensis OX=5...	[more]

BLAST of MC04g0940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73050.1	1.9e-28	68.42	Glucose-methanol-choline (GMC) oxidoreductase family protein	[more]
AT1G72970.1	2.3e-21	58.57	Glucose-methanol-choline (GMC) oxidoreductase family protein	[more]
AT1G72970.2	2.3e-21	58.57	Glucose-methanol-choline (GMC) oxidoreductase family protein	[more]
AT5G51950.1	3.9e-21	69.49	Glucose-methanol-choline (GMC) oxidoreductase family protein	[more]
AT5G51950.2	3.9e-21	69.49	Glucose-methanol-choline (GMC) oxidoreductase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007867	Glucose-methanol-choline oxidoreductase, C-terminal	PFAM	PF05199	GMC_oxred_C	coord: 15..76 e-value: 1.2E-16 score: 61.5
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 27..76 e-value: 5.6E-27 score: 96.8
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 28..76
None	No IPR available	GENE3D	3.30.410.40		coord: 5..26 e-value: 5.6E-27 score: 96.8
None	No IPR available	PANTHER	PTHR45968:SF2	(R)-MANDELONITRILE LYASE-LIKE	coord: 1..76
None	No IPR available	PANTHER	PTHR45968	OSJNBA0019K04.7 PROTEIN	coord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0940.1	MC04g0940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors