MC04g0937 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0937
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	E3 ubiquitin-protein ligase RHA2A
Location	MC04: 17133051 .. 17133386 (-)
RNA-Seq Expression	MC04g0937
Synteny	MC04g0937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTACAGAGCCAACTCAACGACTTCTCCTCCGATTCCCTTCCCCTCTTCTTCCTCTCCCTCATCGCCTCTTCCCTCTCCCATCTCCGCTCCTTCCTCTTCCCACGCTCCCCACGCGCCTCCCACAGCCGCCTCGACCTCAACCCAGTCCTCTCCTACCGCCACCCCCACGACGGGGCCTCCTCCGCCTCCGATTGCGTCGTCTGCCTCTCCCCGCTCTCCGCCGGCGACCGCGTCTCCCGCCTCCCCTGCCGCCACGTCTTCCACACCCACTGCTTCCACGCCTGCCTCCGTCATCTCAACTTCAACTGCCCTCTCTGCCGCTCTCCCATC

mRNA sequence

ATGGGTTTACAGAGCCAACTCAACGACTTCTCCTCCGATTCCCTTCCCCTCTTCTTCCTCTCCCTCATCGCCTCTTCCCTCTCCCATCTCCGCTCCTTCCTCTTCCCACGCTCCCCACGCGCCTCCCACAGCCGCCTCGACCTCAACCCAGTCCTCTCCTACCGCCACCCCCACGACGGGGCCTCCTCCGCCTCCGATTGCGTCGTCTGCCTCTCCCCGCTCTCCGCCGGCGACCGCGTCTCCCGCCTCCCCTGCCGCCACGTCTTCCACACCCACTGCTTCCACGCCTGCCTCCGTCATCTCAACTTCAACTGCCCTCTCTGCCGCTCTCCCATC

Coding sequence (CDS)

ATGGGTTTACAGAGCCAACTCAACGACTTCTCCTCCGATTCCCTTCCCCTCTTCTTCCTCTCCCTCATCGCCTCTTCCCTCTCCCATCTCCGCTCCTTCCTCTTCCCACGCTCCCCACGCGCCTCCCACAGCCGCCTCGACCTCAACCCAGTCCTCTCCTACCGCCACCCCCACGACGGGGCCTCCTCCGCCTCCGATTGCGTCGTCTGCCTCTCCCCGCTCTCCGCCGGCGACCGCGTCTCCCGCCTCCCCTGCCGCCACGTCTTCCACACCCACTGCTTCCACGCCTGCCTCCGTCATCTCAACTTCAACTGCCCTCTCTGCCGCTCTCCCATC

Protein sequence

MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLFPRSPRASHSRLDLNPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLCRSPI

Homology

[Close]

BLAST of MC04g0937 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-24
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRS-FLFPRSP---------RASHSRLDLNP 60
           MGLQ QL+D SSDS+PL  L+L+A+   H+RS  LFP S               +L+LN 
Sbjct: 1   MGLQGQLSDVSSDSIPLMLLALLATFFRHVRSLLLFPSSAPVVVVTSNLSVLADQLNLNR 60

Query: 61  VLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLCRS 113
           + SYR+     ++ASDC+VCLS L  G+ V +L CRHVFH  C    L+HLNFNCPLCRS
Sbjct: 61  LFSYRY---SDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRS 119

[Close]

BLAST of MC04g0937 vs. ExPASy Swiss-Prot
Match: Q9ZT50 (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 59/132 (44.70%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLFPRSPRASHS---------------- 60
           MGLQ QL+D SSDS+PL  LSL+A  ++HLRSFL   + +++ +                
Sbjct: 1   MGLQGQLSDVSSDSIPLMLLSLLAVFINHLRSFLLRLTSKSNPNLPVDDVSIASGLANII 60

Query: 61  ----RLDLNPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRH 113
               +L LN + SYR   DG    SDCVVCLS L  G+ V +L CRHVFH  C    L  
Sbjct: 61  VLADQLSLNRLFSYR-CGDGGGGGSDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQ 120

[Close]

BLAST of MC04g0937 vs. ExPASy Swiss-Prot
Match: Q9Y252 (E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens OX=9606 GN=RNF6 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 6.7e-06
Identity = 22/59 (37.29%), Postives = 30/59 (50.85%), Query Frame = 0


Query: 54  YRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLCRSPI 113
           Y H    +     C VC+S    G+++ +LPC H FH HC    L   N  CP+CR P+
Sbjct: 619 YEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE-NCTCPICRQPV 676

[Close]

BLAST of MC04g0937 vs. ExPASy Swiss-Prot
Match: Q9DBU5 (E3 ubiquitin-protein ligase RNF6 OS=Mus musculus OX=10090 GN=Rnf6 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.5e-05
Identity = 24/59 (40.68%), Postives = 32/59 (54.24%), Query Frame = 0


Query: 56  HPHDGASS--ASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLCRSPI 113
           +  DG  S     C VC+S   AG+++ +LPC H FH HC    L   N  CP+CR P+
Sbjct: 601 YEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSE-NCTCPVCRRPV 658

[Close]

BLAST of MC04g0937 vs. ExPASy Swiss-Prot
Match: Q8RXD3 (E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.3e-05
Identity = 25/75 (33.33%), Postives = 39/75 (52.00%), Query Frame = 0


Query: 36  PRSPRASHSRLDLNPVLSYRHP-HDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCF 95
           PR+P AS   ++  PV+ +         + ++C +C   L  GD++  LPC+H FH  C 
Sbjct: 198 PRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCL 257

Query: 96  HACLRHLNFNCPLCR 110
              L   N +CP+CR
Sbjct: 258 KPWLDEHN-SCPICR 271

[Close]

BLAST of MC04g0937 vs. NCBI nr
Match: KAG7032532.1 (E3 ubiquitin-protein ligase RHA2B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 134 bits (337), Expect = 8.46e-38
Identity = 76/119 (63.87%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLR-SFLFPRSPRAS------HSRLDLNPVLS 60
           MGLQSQLNDFSSDSLPLFFLSL+A+ LS LR SFL   +P         H  L LN +LS
Sbjct: 1   MGLQSQLNDFSSDSLPLFFLSLLANFLSLLRRSFLSSTAPSPDSDISPLHQHLHLNRLLS 60

Query: 61  YRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLCRSPI 112
           +R+  D  S+ASDCVVCL PLSAG+ V RLPC H+FH  C    L HLNFNCPLCRSPI
Sbjct: 61  HRYYAD--SAASDCVVCLCPLSAGNPVRRLPCNHIFHKDCLDGWLHHLNFNCPLCRSPI 117

[Close]

BLAST of MC04g0937 vs. NCBI nr
Match: KAG2302105.1 (hypothetical protein Bca52824_030756 [Brassica carinata])

HSP 1 Score: 122 bits (306), Expect = 5.17e-33
Identity = 65/127 (51.18%), Postives = 80/127 (62.99%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFL--FPRSPRASHS-------------R 60
           MGLQ QL+D SSDS+PL  L+L+A+   HLRSF   F  S  AS S             +
Sbjct: 1   MGLQGQLSDVSSDSIPLMLLALLATLFKHLRSFFLRFSASDDASPSVYSGLANLAILADQ 60

Query: 61  LDLNPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNC 112
           L LN + SYRH  D  ++ASDC+VCLS L  G+ V +L CRHVFH  C    ++HLNFNC
Sbjct: 61  LKLNRLFSYRHADDNTAAASDCIVCLSALKGGEEVRKLDCRHVFHKQCLEGWIQHLNFNC 120

[Close]

BLAST of MC04g0937 vs. NCBI nr
Match: XP_010096722.1 (E3 ubiquitin-protein ligase RHA2A [Morus notabilis] >EXB65574.1 E3 ubiquitin-protein ligase RHA2A [Morus notabilis])

HSP 1 Score: 119 bits (298), Expect = 1.42e-31
Identity = 65/132 (49.24%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLFPRSPR-------------------- 60
           MGLQSQLND SSDS+PL  +++IA+ +S++RS L    P+                    
Sbjct: 1   MGLQSQLNDVSSDSIPLLLVAIIANCVSYVRSVLLGLLPQRFGPEPVDDGLLGSGLAGLI 60

Query: 61  ASHSRLDLNPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRH 112
               +L+LN V SYR+   GA   SDCVVCLS L+ GD+V RL CRHVFH  CF   L H
Sbjct: 61  VLAEQLNLNRVFSYRYSDGGAGGGSDCVVCLSTLTPGDQVRRLSCRHVFHKDCFDGWLGH 120

[Close]

BLAST of MC04g0937 vs. NCBI nr
Match: XP_022006424.1 (E3 ubiquitin-protein ligase RHA2B [Helianthus annuus] >KAF5777337.1 putative transcription factor C2H2 family [Helianthus annuus])

HSP 1 Score: 117 bits (293), Expect = 5.76e-31
Identity = 65/124 (52.42%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLF------------PRSPRASHSRLDL 60
           MGLQ+ L D SSDSLPL  L+ IA+++S+LRS  F            P     SH  L+L
Sbjct: 1   MGLQNHLTDVSSDSLPLLLLATIATAVSYLRSLFFTFLGISPYPSDDPMLLTLSH-HLNL 60

Query: 61  NPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLC 112
           N +LSY+H  D   S  DCVVCL+ L+AG+ V +LPC HVFH  CF   L HLNFNCPLC
Sbjct: 61  NSLLSYKHDPDPVDS--DCVVCLNRLTAGEHVRKLPCHHVFHKECFDGWLHHLNFNCPLC 120

[Close]

BLAST of MC04g0937 vs. NCBI nr
Match: KAF8096272.1 (hypothetical protein N665_0313s0038 [Sinapis alba])

HSP 1 Score: 115 bits (289), Expect = 2.14e-30
Identity = 65/128 (50.78%), Postives = 80/128 (62.50%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFL--FPRSPRASHS-------------R 60
           MGLQ QL+D SSDS+PL  L+LIA+   H+RSF   F  S  AS S             +
Sbjct: 1   MGLQGQLSDASSDSIPLMLLALIATLFKHIRSFFLRFSTSDDASSSVYSGLANVAVLADQ 60

Query: 61  LDLNPVLSYRH-PHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFN 112
           L LN + SYR+   D A++ASDC+VCLS L  G+ V +L CRHVFH  C    + HLNFN
Sbjct: 61  LKLNRLFSYRYNAADNAAAASDCIVCLSTLKRGEEVRKLDCRHVFHKQCLEGWIEHLNFN 120

[Close]

BLAST of MC04g0937 vs. ExPASy TrEMBL
Match: W9RAQ2 (E3 ubiquitin-protein ligase RHA2A OS=Morus notabilis OX=981085 GN=L484_025840 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 6.86e-32
Identity = 65/132 (49.24%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLFPRSPR-------------------- 60
           MGLQSQLND SSDS+PL  +++IA+ +S++RS L    P+                    
Sbjct: 1   MGLQSQLNDVSSDSIPLLLVAIIANCVSYVRSVLLGLLPQRFGPEPVDDGLLGSGLAGLI 60

Query: 61  ASHSRLDLNPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRH 112
               +L+LN V SYR+   GA   SDCVVCLS L+ GD+V RL CRHVFH  CF   L H
Sbjct: 61  VLAEQLNLNRVFSYRYSDGGAGGGSDCVVCLSTLTPGDQVRRLSCRHVFHKDCFDGWLGH 120

[Close]

BLAST of MC04g0937 vs. ExPASy TrEMBL
Match: A0A251SN01 (Putative zinc finger, RING/FYVE/PHD-type OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0459201 PE=4 SV=1)

HSP 1 Score: 117 bits (293), Expect = 2.79e-31
Identity = 65/124 (52.42%), Postives = 79/124 (63.71%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLF------------PRSPRASHSRLDL 60
           MGLQ+ L D SSDSLPL  L+ IA+++S+LRS  F            P     SH  L+L
Sbjct: 1   MGLQNHLTDVSSDSLPLLLLATIATAVSYLRSLFFTFLGISPYPSDDPMLLTLSH-HLNL 60

Query: 61  NPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLC 112
           N +LSY+H  D   S  DCVVCL+ L+AG+ V +LPC HVFH  CF   L HLNFNCPLC
Sbjct: 61  NSLLSYKHDPDPVDS--DCVVCLNRLTAGEHVRKLPCHHVFHKECFDGWLHHLNFNCPLC 120

[Close]

BLAST of MC04g0937 vs. ExPASy TrEMBL
Match: A0A0N9WV24 (RING finger protein OS=Raphanus sativus OX=3726 GN=RHA2b PE=2 SV=1)

HSP 1 Score: 114 bits (286), Expect = 3.49e-30
Identity = 60/131 (45.80%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLFPRSPRAS------------------ 60
           MGLQ QL+D SSDS+PL  ++L+A+   H+RSF    S  +S                  
Sbjct: 1   MGLQGQLSDVSSDSIPLMLVALLATLFKHVRSFFLRFSSSSSVVEDASLSISSGFANIAV 60

Query: 61  -HSRLDLNPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHL 112
              +L LN + SY + H  A++ASDC+VCLS L  G+ V +L CRHVFH  C    L+HL
Sbjct: 61  LADQLKLNRLFSYPYDHKAAAAASDCIVCLSTLKTGEEVRKLGCRHVFHKQCLEGWLQHL 120

[Close]

BLAST of MC04g0937 vs. ExPASy TrEMBL
Match: M4DLT4 (RING-type domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 6.27e-30
Identity = 63/131 (48.09%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLFPRSPR--------ASHS-------- 60
           MGLQ QL+D SSDS+PL  ++LIA+   HLRSF    S          AS S        
Sbjct: 1   MGLQGQLSDVSSDSIPLMLVALIATFFKHLRSFFLRFSSSSVVVVEEDASASSVYSGLAN 60

Query: 61  ---RLDLNPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHL 112
              +L LN +LSY +  + AS++SDC+VCLS L  G++V +L CRHVFH  C    ++HL
Sbjct: 61  LADQLKLNRLLSYLYADNAASASSDCIVCLSTLKTGEQVRKLDCRHVFHKQCLEGWIQHL 120

[Close]

BLAST of MC04g0937 vs. ExPASy TrEMBL
Match: A0A6J0JMU8 (E3 ubiquitin-protein ligase RHA2B-like OS=Raphanus sativus OX=3726 GN=LOC108809342 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 7.22e-30
Identity = 59/132 (44.70%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLFPRSPRAS------------------ 60
           MGLQ QL+D SSDS+PL  ++L+A+   H+RSF    S  +S                  
Sbjct: 1   MGLQGQLSDVSSDSIPLMLVALLATLFKHVRSFFLRFSSSSSVVEDASSLSISSGFANIA 60

Query: 61  --HSRLDLNPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRH 112
               +L LN + SY + H+ A+++SDC+VCLS L  G+ V +L CRHVFH  C    L+H
Sbjct: 61  VLADQLKLNRLFSYPYDHNAAAASSDCIVCLSTLKTGEEVRKLGCRHVFHKQCLEGWLQH 120

[Close]

BLAST of MC04g0937 vs. TAIR 10
Match: AT2G01150.1 (RING-H2 finger protein 2B )

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-25
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRS-FLFPRSP---------RASHSRLDLNP 60
           MGLQ QL+D SSDS+PL  L+L+A+   H+RS  LFP S               +L+LN 
Sbjct: 1   MGLQGQLSDVSSDSIPLMLLALLATFFRHVRSLLLFPSSAPVVVVTSNLSVLADQLNLNR 60

Query: 61  VLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLCRS 113
           + SYR+     ++ASDC+VCLS L  G+ V +L CRHVFH  C    L+HLNFNCPLCRS
Sbjct: 61  LFSYRY---SDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRS 119

[Close]

BLAST of MC04g0937 vs. TAIR 10
Match: AT1G15100.1 (RING-H2 finger A2A )

HSP 1 Score: 104.0 bits (258), Expect = 8.1e-23
Identity = 59/132 (44.70%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 1   MGLQSQLNDFSSDSLPLFFLSLIASSLSHLRSFLFPRSPRASHS---------------- 60
           MGLQ QL+D SSDS+PL  LSL+A  ++HLRSFL   + +++ +                
Sbjct: 1   MGLQGQLSDVSSDSIPLMLLSLLAVFINHLRSFLLRLTSKSNPNLPVDDVSIASGLANII 60

Query: 61  ----RLDLNPVLSYRHPHDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRH 113
               +L LN + SYR   DG    SDCVVCLS L  G+ V +L CRHVFH  C    L  
Sbjct: 61  VLADQLSLNRLFSYR-CGDGGGGGSDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQ 120

[Close]

BLAST of MC04g0937 vs. TAIR 10
Match: AT5G54990.1 (RING/U-box superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06
Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0


Query: 64  ASDCVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLCRS 111
           A DC +CL+ LS+G    +LPC HVFH  C    L+  N +CP+CR+
Sbjct: 171 ALDCPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKK-NPSCPICRT 216

[Close]

BLAST of MC04g0937 vs. TAIR 10
Match: AT5G20910.1 (RING/U-box superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06
Identity = 25/75 (33.33%), Postives = 39/75 (52.00%), Query Frame = 0


Query: 36  PRSPRASHSRLDLNPVLSYRHP-HDGASSASDCVVCLSPLSAGDRVSRLPCRHVFHTHCF 95
           PR+P AS   ++  PV+ +         + ++C +C   L  GD++  LPC+H FH  C 
Sbjct: 198 PRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCL 257

Query: 96  HACLRHLNFNCPLCR 110
              L   N +CP+CR
Sbjct: 258 KPWLDEHN-SCPICR 271

[Close]

BLAST of MC04g0937 vs. TAIR 10
Match: AT3G30460.1 (RING/U-box superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 5.2e-06
Identity = 20/43 (46.51%), Postives = 26/43 (60.47%), Query Frame = 0


Query: 67  CVVCLSPLSAGDRVSRLPCRHVFHTHCFHACLRHLNFNCPLCR 110
           C +C   L+A +R+S LPCRH +H  C    L + N  CPLCR
Sbjct: 97  CAICREELAANERLSELPCRHYYHKECISNWLSNRN-TCPLCR 138

The following BLAST results are available for this feature:

BLAST of MC04g0937 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU51	2.4e-24	50.00	E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 ...	[more]
Q9ZT50	1.1e-21	44.70	E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 ...	[more]
Q9Y252	6.7e-06	37.29	E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens OX=9606 GN=RNF6 PE=1 SV=1	[more]
Q9DBU5	1.5e-05	40.68	E3 ubiquitin-protein ligase RNF6 OS=Mus musculus OX=10090 GN=Rnf6 PE=1 SV=1	[more]
Q8RXD3	4.3e-05	33.33	E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana OX=3702 GN=AIP2 PE=1 SV...	[more]

BLAST of MC04g0937 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032532.1	8.46e-38	63.87	E3 ubiquitin-protein ligase RHA2B, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG2302105.1	5.17e-33	51.18	hypothetical protein Bca52824_030756 [Brassica carinata]	[more]
XP_010096722.1	1.42e-31	49.24	E3 ubiquitin-protein ligase RHA2A [Morus notabilis] >EXB65574.1 E3 ubiquitin-pro...	[more]
XP_022006424.1	5.76e-31	52.42	E3 ubiquitin-protein ligase RHA2B [Helianthus annuus] >KAF5777337.1 putative tra...	[more]
KAF8096272.1	2.14e-30	50.78	hypothetical protein N665_0313s0038 [Sinapis alba]	[more]

BLAST of MC04g0937 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
W9RAQ2	6.86e-32	49.24	E3 ubiquitin-protein ligase RHA2A OS=Morus notabilis OX=981085 GN=L484_025840 PE...	[more]
A0A251SN01	2.79e-31	52.42	Putative zinc finger, RING/FYVE/PHD-type OS=Helianthus annuus OX=4232 GN=HannXRQ...	[more]
A0A0N9WV24	3.49e-30	45.80	RING finger protein OS=Raphanus sativus OX=3726 GN=RHA2b PE=2 SV=1	[more]
M4DLT4	6.27e-30	48.09	RING-type domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 ...	[more]
A0A6J0JMU8	7.22e-30	44.70	E3 ubiquitin-protein ligase RHA2B-like OS=Raphanus sativus OX=3726 GN=LOC1088093...	[more]

BLAST of MC04g0937 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01150.1	1.7e-25	50.00	RING-H2 finger protein 2B	[more]
AT1G15100.1	8.1e-23	44.70	RING-H2 finger A2A	[more]
AT5G54990.1	3.1e-06	46.81	RING/U-box superfamily protein	[more]
AT5G20910.1	3.1e-06	33.33	RING/U-box superfamily protein	[more]
AT3G30460.1	5.2e-06	46.51	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 67..108 e-value: 8.8E-4 score: 28.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 66..109 e-value: 1.5E-10 score: 41.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 67..109 score: 11.530333
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 32..112 e-value: 3.7E-17 score: 63.8
None	No IPR available	PANTHER	PTHR45969	RING ZINC FINGER PROTEIN-RELATED	coord: 44..112
None	No IPR available	PANTHER	PTHR45969:SF5	E3 UBIQUITIN-PROTEIN LIGASE RHA2A	coord: 44..112
None	No IPR available	PANTHER	PTHR45969	RING ZINC FINGER PROTEIN-RELATED	coord: 1..35
None	No IPR available	PANTHER	PTHR45969:SF5	E3 UBIQUITIN-PROTEIN LIGASE RHA2A	coord: 1..35
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 60..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0937.1	MC04g0937.1	mRNA