Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATCATTGCAACCCCATCTTCAGAAAGCATAAGGAGGACATGGAGAAGGAGAAAATACCAGAGGTTAGGTAGTAGTAATGGCCCTACAAGATCAAGGAGTTTCAGGTTGGGGCGGCTATGGCGGATGAGAAGAGGCGCTCCAAGGCTGCGGTTTAAAATGGCATCGCCGTTGAAGCTTCTGGCGAGGTTCCACGATGCGTACGTCGAGATGATGATGAGGGTGGCGAACGGTGTCGGGAATATGTACGCGATCGGAGCGTTTGGTGGTGGTGGGAAGAGGAGGATGATCCCAAAACCAGGAAATCAAGTGTCCTTGGTTTCTTGTGGGGGAGAACAAGTTGATGCTAAATTGGTTTTGGAAATCTATAACAAACTTGCTGCCTCCAAGAAC
mRNA sequence
ATGGAGATCATTGCAACCCCATCTTCAGAAAGCATAAGGAGGACATGGAGAAGGAGAAAATACCAGAGGTTAGGTAGTAGTAATGGCCCTACAAGATCAAGGAGTTTCAGGTTGGGGCGGCTATGGCGGATGAGAAGAGGCGCTCCAAGGCTGCGGTTTAAAATGGCATCGCCGTTGAAGCTTCTGGCGAGGTTCCACGATGCGTACGTCGAGATGATGATGAGGGTGGCGAACGGTGTCGGGAATATGTACGCGATCGGAGCGTTTGGTGGTGGTGGGAAGAGGAGGATGATCCCAAAACCAGGAAATCAAGTGTCCTTGGTTTCTTGTGGGGGAGAACAAGTTGATGCTAAATTGGTTTTGGAAATCTATAACAAACTTGCTGCCTCCAAGAAC
Coding sequence (CDS)
ATGGAGATCATTGCAACCCCATCTTCAGAAAGCATAAGGAGGACATGGAGAAGGAGAAAATACCAGAGGTTAGGTAGTAGTAATGGCCCTACAAGATCAAGGAGTTTCAGGTTGGGGCGGCTATGGCGGATGAGAAGAGGCGCTCCAAGGCTGCGGTTTAAAATGGCATCGCCGTTGAAGCTTCTGGCGAGGTTCCACGATGCGTACGTCGAGATGATGATGAGGGTGGCGAACGGTGTCGGGAATATGTACGCGATCGGAGCGTTTGGTGGTGGTGGGAAGAGGAGGATGATCCCAAAACCAGGAAATCAAGTGTCCTTGGTTTCTTGTGGGGGAGAACAAGTTGATGCTAAATTGGTTTTGGAAATCTATAACAAACTTGCTGCCTCCAAGAAC
Protein sequence
MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLVLEIYNKLAASKN
Homology
BLAST of MC04g0932 vs. NCBI nr
Match:
XP_022152306.1 (uncharacterized protein LOC111020054 [Momordica charantia])
HSP 1 Score: 258 bits (659), Expect = 1.67e-86
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK
Sbjct: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
Query: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV
Sbjct: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
Query: 121 LEIYNKLAASKN 132
LEIYNKLAASKN
Sbjct: 121 LEIYNKLAASKN 132
BLAST of MC04g0932 vs. NCBI nr
Match:
KAG7016737.1 (hypothetical protein SDJN02_21847, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 201 bits (511), Expect = 6.31e-64
Identity = 104/132 (78.79%), Postives = 114/132 (86.36%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
M+IIATPS+ S++R WRRR+YQRLGS G RSRSFRLGRLWRMRR AP+LR KMASPLK
Sbjct: 1 MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRMRRRAPKLRLKMASPLK 60
Query: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
+LARFHDAYV+MM RVAN VGNMYAIG FG G + IPKP NQ+SLVSCGGEQVDAKLV
Sbjct: 61 VLARFHDAYVKMMTRVANNVGNMYAIGGFGNG---KRIPKPRNQISLVSCGGEQVDAKLV 120
Query: 121 LEIYNKLAASKN 132
LEIYNKLA SKN
Sbjct: 121 LEIYNKLAVSKN 129
BLAST of MC04g0932 vs. NCBI nr
Match:
KAG6579224.1 (hypothetical protein SDJN03_23672, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 200 bits (509), Expect = 1.27e-63
Identity = 104/132 (78.79%), Postives = 114/132 (86.36%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
M+IIATPS+ S++R WRRR+YQRLGS G RSRSFRLGRLWRMRR AP+LR KMASPLK
Sbjct: 1 MDIIATPSALSLKRLWRRRRYQRLGSGMGAARSRSFRLGRLWRMRRRAPKLRLKMASPLK 60
Query: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
+LARFHDAYV+MM RVAN VGNMYAIG FG G + IPKP NQ+SLVSCGGEQVDAKLV
Sbjct: 61 VLARFHDAYVKMMTRVANNVGNMYAIGGFGNG---KRIPKPRNQISLVSCGGEQVDAKLV 120
Query: 121 LEIYNKLAASKN 132
LEIYNKLA SKN
Sbjct: 121 LEIYNKLAVSKN 129
BLAST of MC04g0932 vs. NCBI nr
Match:
XP_023550637.1 (uncharacterized protein LOC111808720 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 196 bits (499), Expect = 3.61e-62
Identity = 103/132 (78.03%), Postives = 113/132 (85.61%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
M+IIATPS+ S++R WRRR+YQRLGS G RSRSF LGRLWRMRR AP+LR KMASPLK
Sbjct: 1 MDIIATPSALSLKRLWRRRRYQRLGSGTGAPRSRSFHLGRLWRMRRRAPKLRLKMASPLK 60
Query: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
+LARFHDAYV+MM RVAN VGNMYAIG FG G + IPK GNQVSLV CGGEQVDAKLV
Sbjct: 61 VLARFHDAYVKMMTRVANNVGNMYAIGGFGNG---KRIPKLGNQVSLVYCGGEQVDAKLV 120
Query: 121 LEIYNKLAASKN 132
LE+YNKLAASKN
Sbjct: 121 LEMYNKLAASKN 129
BLAST of MC04g0932 vs. NCBI nr
Match:
XP_022993314.1 (uncharacterized protein LOC111489358 [Cucurbita maxima])
HSP 1 Score: 195 bits (495), Expect = 1.57e-61
Identity = 100/132 (75.76%), Postives = 112/132 (84.85%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
M+IIATPS+ S++R WRRR+YQRLGS G RSRSFRLGRLWR+RR AP+LR KM SP K
Sbjct: 1 MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRIRRRAPKLRLKMVSPFK 60
Query: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
LARFHDAYV+MMMRVAN VG+MYAIG +G G + IPKP NQVSLVSCGGEQVD KLV
Sbjct: 61 ALARFHDAYVKMMMRVANSVGSMYAIGGYGNG---KRIPKPSNQVSLVSCGGEQVDTKLV 120
Query: 121 LEIYNKLAASKN 132
LE+YNKLAASKN
Sbjct: 121 LEMYNKLAASKN 129
BLAST of MC04g0932 vs. ExPASy TrEMBL
Match:
A0A6J1DHB4 (uncharacterized protein LOC111020054 OS=Momordica charantia OX=3673 GN=LOC111020054 PE=4 SV=1)
HSP 1 Score: 258 bits (659), Expect = 8.08e-87
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK
Sbjct: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
Query: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV
Sbjct: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
Query: 121 LEIYNKLAASKN 132
LEIYNKLAASKN
Sbjct: 121 LEIYNKLAASKN 132
BLAST of MC04g0932 vs. ExPASy TrEMBL
Match:
A0A6J1JZV2 (uncharacterized protein LOC111489358 OS=Cucurbita maxima OX=3661 GN=LOC111489358 PE=4 SV=1)
HSP 1 Score: 195 bits (495), Expect = 7.59e-62
Identity = 100/132 (75.76%), Postives = 112/132 (84.85%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
M+IIATPS+ S++R WRRR+YQRLGS G RSRSFRLGRLWR+RR AP+LR KM SP K
Sbjct: 1 MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFRLGRLWRIRRRAPKLRLKMVSPFK 60
Query: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
LARFHDAYV+MMMRVAN VG+MYAIG +G G + IPKP NQVSLVSCGGEQVD KLV
Sbjct: 61 ALARFHDAYVKMMMRVANSVGSMYAIGGYGNG---KRIPKPSNQVSLVSCGGEQVDTKLV 120
Query: 121 LEIYNKLAASKN 132
LE+YNKLAASKN
Sbjct: 121 LEMYNKLAASKN 129
BLAST of MC04g0932 vs. ExPASy TrEMBL
Match:
A0A6J1FGC7 (uncharacterized protein LOC111445168 OS=Cucurbita moschata OX=3662 GN=LOC111445168 PE=4 SV=1)
HSP 1 Score: 194 bits (494), Expect = 1.08e-61
Identity = 102/132 (77.27%), Postives = 111/132 (84.09%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
M+IIATPS+ S++R WRRR+YQRLGS G RSRSF LGRLWRMRR AP+LR KMA P K
Sbjct: 1 MDIIATPSALSLKRLWRRRRYQRLGSGTGAARSRSFHLGRLWRMRRRAPKLRLKMALPFK 60
Query: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
LARFHDAYV+MM RVAN VGNMYAIG FG G + IPKP NQVSLVSCGGEQVDAKLV
Sbjct: 61 ALARFHDAYVKMMTRVANKVGNMYAIGGFGNG---KRIPKPRNQVSLVSCGGEQVDAKLV 120
Query: 121 LEIYNKLAASKN 132
LE+YNKLAASKN
Sbjct: 121 LEMYNKLAASKN 129
BLAST of MC04g0932 vs. ExPASy TrEMBL
Match:
A0A6J1H4C2 (uncharacterized protein LOC111460357 OS=Cucurbita moschata OX=3662 GN=LOC111460357 PE=4 SV=1)
HSP 1 Score: 181 bits (460), Expect = 1.58e-56
Identity = 94/132 (71.21%), Postives = 108/132 (81.82%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRLGSSNGPTRSRSFRLGRLWRMRRGAPRLRFKMASPLK 60
M+IIATPS++ +RR WRRR YQ+LGS PTRSRSFRL RLW MRR A +++ K+ASPLK
Sbjct: 1 MDIIATPSAQGMRRLWRRRGYQKLGSDTRPTRSRSFRLRRLWHMRRQASKVQLKIASPLK 60
Query: 61 LLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVDAKLV 120
LLA+FHD YVEMMM+VAN VGN+YAIGAFG G + IPKP NQVSL +C GE VDAK V
Sbjct: 61 LLAKFHDTYVEMMMKVANSVGNIYAIGAFGNG---KRIPKPRNQVSLATCDGEHVDAKFV 120
Query: 121 LEIYNKLAASKN 132
LEIYNKLA SKN
Sbjct: 121 LEIYNKLAPSKN 129
BLAST of MC04g0932 vs. ExPASy TrEMBL
Match:
A0A5D3BKB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00020 PE=4 SV=1)
HSP 1 Score: 160 bits (406), Expect = 2.96e-48
Identity = 93/136 (68.38%), Postives = 110/136 (80.88%), Query Frame = 0
Query: 1 MEIIATPSSESIRRTWRRRKYQRL--GSSNGPTRS-RSFRLGRLWRMRRGA-PRLRFKMA 60
M+IIAT S++++RR WRRR YQRL GS+ PTRS RSFR+GR+ MRR A P+LR KM+
Sbjct: 1 MDIIATSSAQNLRRLWRRRTYQRLRSGSNTVPTRSLRSFRVGRMMIMRRRASPKLRLKMS 60
Query: 61 SPLKLLARFHDAYVEMMMRVANGVGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQVD 120
SPLK++A+ HDAYVEMMMR+AN VGNMYAIG FG R+ IPKP NQV L GGEQ+D
Sbjct: 61 SPLKVVAKIHDAYVEMMMRLANSVGNMYAIGGFG---NRKRIPKPQNQVPL---GGEQID 120
Query: 121 AKLVLEIYNKLAASKN 132
AKLVLEIYNKLA+SKN
Sbjct: 121 AKLVLEIYNKLASSKN 130
BLAST of MC04g0932 vs. TAIR 10
Match:
AT2G47485.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 48.1 bits (113), Expect = 6.2e-06
Identity = 47/133 (35.34%), Postives = 59/133 (44.36%), Query Frame = 0
Query: 14 RTWRR-RKYQRLGSS---------------NGPTRSRSFRLGRLWRMRRGAPRLR-FKMA 73
R WRR R YQRL S PTR R R WR++ P+LR K A
Sbjct: 4 RYWRRLRGYQRLDGSAKKASSGRRNVKRVKMDPTRKR-----RFWRIKI-VPKLRILKKA 63
Query: 74 SPLKLLARFHDAYVEMMMRVANG--VGNMYAIGAFGGGGKRRMIPKPGNQVSLVSCGGEQ 128
SP KLL DAYV MM+R+AN VG+ Y G +G G ++
Sbjct: 64 SPKKLLTWLRDAYVNMMLRLANSRVVGSSYGYGEYGYGS---------------GLASKE 115
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| XP_022152306.1 | 1.67e-86 | 100.00 | uncharacterized protein LOC111020054 [Momordica charantia] | [more] |
| KAG7016737.1 | 6.31e-64 | 78.79 | hypothetical protein SDJN02_21847, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6579224.1 | 1.27e-63 | 78.79 | hypothetical protein SDJN03_23672, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023550637.1 | 3.61e-62 | 78.03 | uncharacterized protein LOC111808720 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022993314.1 | 1.57e-61 | 75.76 | uncharacterized protein LOC111489358 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DHB4 | 8.08e-87 | 100.00 | uncharacterized protein LOC111020054 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
| A0A6J1JZV2 | 7.59e-62 | 75.76 | uncharacterized protein LOC111489358 OS=Cucurbita maxima OX=3661 GN=LOC111489358... | [more] |
| A0A6J1FGC7 | 1.08e-61 | 77.27 | uncharacterized protein LOC111445168 OS=Cucurbita moschata OX=3662 GN=LOC1114451... | [more] |
| A0A6J1H4C2 | 1.58e-56 | 71.21 | uncharacterized protein LOC111460357 OS=Cucurbita moschata OX=3662 GN=LOC1114603... | [more] |
| A0A5D3BKB9 | 2.96e-48 | 68.38 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G47485.1 | 6.2e-06 | 35.34 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
