MC04g0683 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0683
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	CACTA en-spm transposon protein
Location	MC04: 6439167 .. 6439630 (+)
RNA-Seq Expression	MC04g0683
Synteny	MC04g0683

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACCAATAACTATCAAATATGAAGATGGCAAGCCAGTTTGTAGAAATTGCTCGAAGCTGGCAACTCAAATTGGTATTTGTGTGCGGAATAACGTTCCTCTGGAATGTGCACAATGGTTGGATGTTAAACAGGAGACAAAAAATGAGATATTACAAAGAATTTGCGTAAGTTTTGATTTAATGGCTTTTTTTCTAAATATATTTATTTCGTAGATCGTTAACACATTCTTTTGGTTGTTTATTATTAGAACCACTTCAATCTCGATATGAACGACCATATTGTCATGCGATACTTGGACCACGAGATGAGTACTAGGTATAAGGATTTTCGCTACCGATTGCACAAATGGTACAAGGTATCTGATCCCACTGAGGCACGAAACAATCGACATGAAGATGTATTGCTAGATGAAGATTGGAATCGCTTGTGCGATCAATGGGAATCGGAGAAGTTTAAGGTATGT

mRNA sequence

ATACCAATAACTATCAAATATGAAGATGGCAAGCCAGTTTGTAGAAATTGCTCGAAGCTGGCAACTCAAATTGGTATTTGTGTGCGGAATAACGTTCCTCTGGAATGTGCACAATGGTTGGATGTTAAACAGGAGACAAAAAATGAGATATTACAAAGAATTTGCAACCACTTCAATCTCGATATGAACGACCATATTGTCATGCGATACTTGGACCACGAGATGAGTACTAGGTATAAGGATTTTCGCTACCGATTGCACAAATGGTACAAGGTATCTGATCCCACTGAGGCACGAAACAATCGACATGAAGATGTATTGCTAGATGAAGATTGGAATCGCTTGTGCGATCAATGGGAATCGGAGAAGTTTAAGGTATGT

Coding sequence (CDS)

ATACCAATAACTATCAAATATGAAGATGGCAAGCCAGTTTGTAGAAATTGCTCGAAGCTGGCAACTCAAATTGGTATTTGTGTGCGGAATAACGTTCCTCTGGAATGTGCACAATGGTTGGATGTTAAACAGGAGACAAAAAATGAGATATTACAAAGAATTTGCAACCACTTCAATCTCGATATGAACGACCATATTGTCATGCGATACTTGGACCACGAGATGAGTACTAGGTATAAGGATTTTCGCTACCGATTGCACAAATGGTACAAGGTATCTGATCCCACTGAGGCACGAAACAATCGACATGAAGATGTATTGCTAGATGAAGATTGGAATCGCTTGTGCGATCAATGGGAATCGGAGAAGTTTAAGGTATGT

Protein sequence

IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNLDMNDHIVMRYLDHEMSTRYKDFRYRLHKWYKVSDPTEARNNRHEDVLLDEDWNRLCDQWESEKFKVC

Homology

[Close]

BLAST of MC04g0683 vs. NCBI nr
Match: XP_022156301.1 (uncharacterized protein LOC111023227 [Momordica charantia])

HSP 1 Score: 122 bits (307), Expect = 4.41e-32
Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           I I I+ ED KPVC +  KL +QIG+ VR+ V L C  W DV Q+ KN I+ R+ N F L
Sbjct: 102 IEINIEEEDDKPVCSHSLKLVSQIGVWVRSIVSLNCEHWSDVNQDDKNSIINRLSNQFIL 161

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWYKVSDPTEARNNRHEDVLLDED 111
           ++ND IV RYL+HEMS+R+ DFRYRLHK Y    P EAR+++H+DV   ED
Sbjct: 162 NLNDPIVYRYLEHEMSSRHIDFRYRLHKHYMQYSPKEARHHKHKDVARGED 212

[Close]

BLAST of MC04g0683 vs. NCBI nr
Match: RVW17742.1 (hypothetical protein CK203_071777 [Vitis vinifera])

HSP 1 Score: 94.7 bits (234), Expect = 1.83e-21
Identity = 50/127 (39.37%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           +PITIK  DGK   + C KL+ +IG+ +R + P+   +W  + +   N +L RI   F L
Sbjct: 26  LPITIKPSDGKQTGKYCEKLSNEIGLTMRQHAPVRVEKWKQMPRAEINTMLDRIKEKFAL 85

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWYKVSDPT--EARNNRHEDVLLDEDWNRLCDQ 120
           D+    V + L+ ++S R++++R  LHK +K   PT  EA+ N HE V   EDW+ LCD+
Sbjct: 86  DLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKF-PTMVEAKRNPHESVSNQEDWDYLCDR 145

Query: 121 WESEKFK 125
           + SE+FK
Sbjct: 146 FSSEEFK 151

[Close]

BLAST of MC04g0683 vs. NCBI nr
Match: XP_019080375.1 (PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera])

HSP 1 Score: 95.9 bits (237), Expect = 1.14e-20
Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           +PITIK  DGK   + C KL+ +IG+ VR + P+   +W  + +   N +L RI   F L
Sbjct: 30  LPITIKPSDGKQTGKYCEKLSNEIGLTVRQHAPVRVEKWKQMPRAEINTMLDRIKEKFAL 89

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWYKVSDPT--EARNNRHEDVLLDEDWNRLCDQ 120
           D+    V + L+ ++S R++++R  LHK +K   PT  EA+ N HE V   EDW+ LCD+
Sbjct: 90  DLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKF-PTVVEAKRNPHESVSNQEDWDYLCDR 149

Query: 121 WESEKFK 125
           + SE+FK
Sbjct: 150 FSSEEFK 155

[Close]

BLAST of MC04g0683 vs. NCBI nr
Match: KAA0032076.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 3.91e-20
Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           + I I  E+GKPV     K+A  IG  VRN + L C  W  +  + K  ++ R   HF  
Sbjct: 206 VKIEINEEEGKPVTTFAPKIALGIGTAVRNTILLSCENWKAIPMDVKELMIDRSETHFEF 265

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWY-KVSDPTEARNNRHEDVLLDEDWNRLCDQW 120
           D    IV +YLD +M   +++FR  LHK+Y K  D  EAR N   D +  EDWN +CD+W
Sbjct: 266 DPTTMIVRKYLDEKMQNIFREFRAGLHKYYCKFDDFIEARANP-PDKITHEDWNMMCDRW 325

Query: 121 ESEKFK 125
           E++ +K
Sbjct: 326 ETDAWK 330

[Close]

BLAST of MC04g0683 vs. NCBI nr
Match: KAA0040145.1 (transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 6.95e-20
Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           I I I  E+GKPV     K+A  IG  +RN +PL C  W  V    +  ++ R+  HF  
Sbjct: 695 IKIEINEEEGKPVTTFAPKIALGIGTALRNTIPLSCENWKAVPMGVRELVIDRLETHFEF 754

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWY-KVSDPTEARNNRHEDVLLDEDWNRLCDQW 120
           D  + +V +YL+ +M   +++FR  LHK+Y +  D  EAR N    +   EDWN +CD+W
Sbjct: 755 DPTNMVVRKYLEEKMQNIFREFRADLHKYYCQFDDSVEARANPPNRITY-EDWNMMCDRW 814

Query: 121 ESEKFK 125
           E++ +K
Sbjct: 815 ETDAWK 819

[Close]

BLAST of MC04g0683 vs. ExPASy TrEMBL
Match: A0A6J1DUJ0 (uncharacterized protein LOC111023227 OS=Momordica charantia OX=3673 GN=LOC111023227 PE=4 SV=1)

HSP 1 Score: 122 bits (307), Expect = 2.14e-32
Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           I I I+ ED KPVC +  KL +QIG+ VR+ V L C  W DV Q+ KN I+ R+ N F L
Sbjct: 102 IEINIEEEDDKPVCSHSLKLVSQIGVWVRSIVSLNCEHWSDVNQDDKNSIINRLSNQFIL 161

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWYKVSDPTEARNNRHEDVLLDED 111
           ++ND IV RYL+HEMS+R+ DFRYRLHK Y    P EAR+++H+DV   ED
Sbjct: 162 NLNDPIVYRYLEHEMSSRHIDFRYRLHKHYMQYSPKEARHHKHKDVARGED 212

[Close]

BLAST of MC04g0683 vs. ExPASy TrEMBL
Match: A0A438C3A8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_071777 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.86e-22
Identity = 50/127 (39.37%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           +PITIK  DGK   + C KL+ +IG+ +R + P+   +W  + +   N +L RI   F L
Sbjct: 26  LPITIKPSDGKQTGKYCEKLSNEIGLTMRQHAPVRVEKWKQMPRAEINTMLDRIKEKFAL 85

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWYKVSDPT--EARNNRHEDVLLDEDWNRLCDQ 120
           D+    V + L+ ++S R++++R  LHK +K   PT  EA+ N HE V   EDW+ LCD+
Sbjct: 86  DLTQEHVKKSLEKQLSDRFRNWRCDLHKHFKKF-PTMVEAKRNPHESVSNQEDWDYLCDR 145

Query: 121 WESEKFK 125
           + SE+FK
Sbjct: 146 FSSEEFK 151

[Close]

BLAST of MC04g0683 vs. ExPASy TrEMBL
Match: A0A5A7SPZ3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.89e-20
Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           + I I  E+GKPV     K+A  IG  VRN + L C  W  +  + K  ++ R   HF  
Sbjct: 206 VKIEINEEEGKPVTTFAPKIALGIGTAVRNTILLSCENWKAIPMDVKELMIDRSETHFEF 265

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWY-KVSDPTEARNNRHEDVLLDEDWNRLCDQW 120
           D    IV +YLD +M   +++FR  LHK+Y K  D  EAR N   D +  EDWN +CD+W
Sbjct: 266 DPTTMIVRKYLDEKMQNIFREFRAGLHKYYCKFDDFIEARANP-PDKITHEDWNMMCDRW 325

Query: 121 ESEKFK 125
           E++ +K
Sbjct: 326 ETDAWK 330

[Close]

BLAST of MC04g0683 vs. ExPASy TrEMBL
Match: A0A0A0LM17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G294860 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.10e-20
Identity = 54/126 (42.86%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           IPI I+ +D KP+C++ SK  +QIG                 K+           N+F L
Sbjct: 41  IPIKIELKDRKPICKDSSKSNSQIG-----------------KE-----------NYFIL 100

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWYKVSD-PTEARNNRHEDVLLDEDWNRLCDQW 120
           D++D +V  YLDHEMS  Y+DF   LHK YK  D PTEAR +  + V  D DW RLCD+W
Sbjct: 101 DLDDPLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVAQDSDWARLCDRW 138

Query: 121 ESEKFK 125
           E E FK
Sbjct: 161 EREGFK 138

[Close]

BLAST of MC04g0683 vs. ExPASy TrEMBL
Match: A0A5A7TFG0 (Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold768G00210 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.36e-20
Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 1   IPITIKYEDGKPVCRNCSKLATQIGICVRNNVPLECAQWLDVKQETKNEILQRICNHFNL 60
           I I I  E+GKPV     K+A  IG  +RN +PL C  W  V    +  ++ R+  HF  
Sbjct: 695 IKIEINEEEGKPVTTFAPKIALGIGTALRNTIPLSCENWKAVPMGVRELVIDRLETHFEF 754

Query: 61  DMNDHIVMRYLDHEMSTRYKDFRYRLHKWY-KVSDPTEARNNRHEDVLLDEDWNRLCDQW 120
           D  + +V +YL+ +M   +++FR  LHK+Y +  D  EAR N    +   EDWN +CD+W
Sbjct: 755 DPTNMVVRKYLEEKMQNIFREFRADLHKYYCQFDDSVEARANPPNRITY-EDWNMMCDRW 814

Query: 121 ESEKFK 125
           E++ +K
Sbjct: 815 ETDAWK 819

The following BLAST results are available for this feature:

BLAST of MC04g0683 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g0683 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156301.1	4.41e-32	54.05	uncharacterized protein LOC111023227 [Momordica charantia]	[more]
RVW17742.1	1.83e-21	39.37	hypothetical protein CK203_071777 [Vitis vinifera]	[more]
XP_019080375.1	1.14e-20	40.16	PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera]	[more]
KAA0032076.1	3.91e-20	39.68	transposase [Cucumis melo var. makuwa]	[more]
KAA0040145.1	6.95e-20	37.30	transposon protein, putative, CACTA, En/Spm sub-class [Cucumis melo var. makuwa]	[more]

BLAST of MC04g0683 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUJ0	2.14e-32	54.05	uncharacterized protein LOC111023227 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A438C3A8	8.86e-22	39.37	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_071777 PE=4 SV=1	[more]
A0A5A7SPZ3	1.89e-20	39.68	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE...	[more]
A0A0A0LM17	3.10e-20	42.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G294860 PE=4 SV=1	[more]
A0A5A7TFG0	3.36e-20	37.30	Transposon protein, putative, CACTA, En/Spm sub-class OS=Cucumis melo var. makuw...	[more]

BLAST of MC04g0683 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33499	FAMILY NOT NAMED	coord: 11..125
None	No IPR available	PANTHER	PTHR33499:SF17	OS12G0231700 PROTEIN	coord: 11..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0683.1	MC04g0683.1	mRNA