MC04g0612 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0612
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA polymerase kappa
Location	MC04: 5403652 .. 5411172 (-)
RNA-Seq Expression	MC04g0612
Synteny	MC04g0612

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGAAGCTTCGGCTTCGGGACCTGAAGATTCATGGAAAGCAGCGAGACCGCCGGCGATGCCGATTGTCCATGGCAATCTTACCACACTGTCTATACCAATGCGAAAGCCGGTATTTATTCTCTCTCCAGTCCTCACGGACTGTTACAAATCTAGGGTTCTCTTTTGATTGTTCTGTTTAAAGTGTCGACTGTCGGACGTTAGTTTCAATTCACGGTGTCACTTTGATTTTACTTTGGAGGATTTAAATATAAAATTTATTTAGAGATAAATTCTAGTAATTGATGAGCCCGTCTGATCAATTGAAATAGTGTTTGAGTTGCTTAATCTTGATCAATTATATTGTTCCTGATCGAAAGAGAAAAATAATTAGGGAATGAGTTTATTTTTAGAGAAATCATAGCAAATATCTGATATTGATGATATAATTGCAAAAAAGGAAAGGTTTACTTTCTACAGATATAAAGCTCGATGTCTGTTGAATTCTGTTTATAAAAAATAATGAAATATGACGGATATATTTTGATATCCAATAATCTTAATTCTCCCTTTCTCTTCTTCTGCTGGTAAGGTATGGAAGGAGTTGACAAGGAAAGAGTGCAAAGAATTGTTTATGAAATGAGTAAAGGGTCAAAATATTTTGAAAATGAGGAACGTAAAGAGGCCATTATCAGAGAAAAGATTGAGAAGATGCGAGCTAGGTGTGTACAACTTACTGCTACGGATCTTTCTCACTATGAAAAGGTAGATTTAGTTGTGAACCCTCCCCCTTACCCTAGGCAGTAGGCGCATTGACATGCTTATTCATTTATGCTTTATTTACGTTCTTTATTCTATAGAAATTTTGTCCCGCTTCCTGGTTTATTTATTACTTATAATATAACTTTGGCTGCTTTTTGCCTCTTGAAAAATTGCATGTTCAGGGATTAGAACTGCCAACTATTATTTCCTAGTTAGAAAAACACCAAACCTGGAAGCTTTTATTCTCACTTTACATCCCATGAAATAGTGAGGGGATCAATTATGTAGTTAGATCTGCATTCTGTAGAGAGGTCGGTTCAATTGCCCAAAAAAGGATGATTATTATTTTTTTCCCCTACCTTTTTCCATTTCTTTATTATTGCCCACAGTTTGGCGATTTCCATGAAAATGGAAGATATCGAATCATACCATGCAAAGACTCGTGAAACATTAGGATTTATTTGTGTGTCTTCCTTACCACATCCATGAGTAATCACAACCTAGAGATCTGAAACAAACAAGACAACTGGGTAGTGGTCCCATGCTCAAATCTTGTTGAAGGATGAGTTCACTCTTAATTTTTGCCACAGCTATTTTAAGAACCTGATATTTTAGGCTGATCAGTATATTTCCTGATTCTTGCTGTATGGTCTTCATATTTGCTTATAATATCAGTTTAGCCAAGAGCTTTGTTCTCTTGTGAGCAGGTTGCAGATAAAAGAACTTTTGAGCTAGAAAGTACACGAGACCTATCAAGGATATGGTTGCATGTAGATATGGATGCTTTCTATGCCGCTGTTGAAACTTTAAGCAATTCTTCATTAGAGGGCAAGCCGATGGCTGTTGGTAGTATGTCTATGATTTCCACAGCTAACTATGAGGTTTATTATCTATATTGAATCATTGAATCATAAGTTACTGGTAGCATCATTTTTGTAACTTGTTACTTATACTGGACTAGGCTCGAAGATATGGTGTTCGAGCTGCAATGCCTGGTTTTATTGCACGTAGATTATGTCCAGAGTTAATCTTTGTTCCTGTAGATTTCAAAAAGTACACTTATTACAGTGATTTAACTAGGAAAGGTAAGAAATTGTGCTTCAAGGCGCTCCAAATGTATTTTGTATGTTTTGTCCCCATCCTTTAGTATTTACTCGTTTGTCTTGTCAGTATTCCATAGGTATGATCCCAACTTCTTGGCTGCTAGTCTGGATGAAGCATACCTCGATATAACTGAAGTCTGCAAAGAAAGAGGCCTAACAAGTGAAGAAGTAATCGCATATTATTTTTTTACTTTATCTAAAAAATTGATGTTTCGGTATTTAGTTGTGGCAGACACGTCTTTAAATCATACTATATGGTCTATATTAGATCCTTTTTAATTTATACTTTCAGTATATTCTAGAGAACCCAGAAACAGCATTAAAGGATGTTATTATGTAGTTACGGAAGTTATTTACATCGAGATTATATATTTCTGGATAAGAAATGAATGGTATCACATGCCGCAGATAATCCTTTGGTAGCAGTCTCTTTAATCATTTGATACTAAAGTTTTCCTCTTGCCATTTTGGTTAGATTGCTAGTGATCTCAGAACCAGTATTTATGAAGAGACTGGTCTTACGTGTAGTGCTGGGGTTGCTGCCAACCGGCTACTTGCCAAGGTTTTATAATCACTCTCAAGATCTATTGCATATATGAATCTCTTGTGGAAAAAAGAATACAAGTTTATTCATGTTTTGGCGACCGTGACCTGCTAATTGGCAGCATGTTTATTTTACTATATATGGGATGAAAAGAGTAGAATGTACGATTCCATTTCTCTTCTGTTGTATGGTTAATTGTGGTCCTGGTAGATGCAAACGAAATCACAAGAAATATTGTTCTTAAATATTCAAGTCAGTACAGAACAACTGAATTTCCCCACCATCTTGTTATTCAGGTCTGCTCGGACATTAACAAACCAAATGGACAATTCATTTTACCAAATGACCGGAGAGCTATATTGGCATTTATATCATCACTACCCATAAGAAAGGTATGTAGTTATTGCCTTTACATTGGAACAGAACTCAGGCTTTTATTCACAAAGATGTTATCAAATATCAAAGTTACGTAGATCCTCATGAATATTCCTAAGTTCTATCTTGTGGATGAAATGAATTAAAGAAATTATTATTTTGAGATTGGTGGCATTGGAAAGGTCACAGAACATATCTTAAGGGATGCTTTTGGAATTAATACATGTGAGGACATGCTGCAGAAAGGTGGACACCTCTGTGCGTTGTTTTCTCAATCCTCAGCAGGTTGGTGTGCTATAGTACAATATATTGCATCCCACAGATATTATATATTTGTCTTGATGACTTGAAGTCACTTGTTCTCTCTGTGTTTATTTTTATTTTTATCAATACAACTTTTTATCTTTTATGCTCATATTTTGATTTGTTTGAGTCCTATCTACTTTTTCTTTTTATTTATTAAATGAGATGCAAGTTTGTGGTTCTTGGTTTTTATTTAGTCTTTTATTGTTGCGTAAGCTGGCCCGGACATTCACGGATATAAAAAAAAAAAAATTATTTATTTTATTTGAACCACTAATGTTCTGCTATTAGTACAATGATGTACATTTTTTCAACAACCATGAAGGTCCAAGCTAGCATACACATACTTCGATCATAAAACAATTGCTTGATGTCACAATATCTGATATGGGAGAACTTTAGGTAGACGGTCACTATTATGTTAACACGTGGTGGTCGTTGTGCATCATTTTTTTTTGTATTGCATATAGTTGTGGTTTTTTTTAATGAGAAAGTGTTTTGCTTAAAAATGCGTATTAATTAGTTATTAATGCCTAATAGAATTTTTTTAAGAACTAAAGAAAAATAAATAATGAATTTCATATAAACTGAACTTCAGATCCAGTCAGGTTTCCATGATCTAAGGGAGGACCTAATATCAGTATTTTGTGTAACTGCTATAACTGAATGCTTACCGCACTACAATTCACATTACTCACGAGATTTTTTTGTTCTTTTCAAGCAAGCAATCAAATGGGCATATTGAATTGAAACATTGGAATATTGTACGGGGGAGAATATATTCTCCTTTTTGCTGACGACATCTTTATGTTGATAAATTATGGAAGATGGTCTCTAGAGAGCCAATTGTCAAGAACATGATATGACATGTTATTAAGATATCAACAATATATGAGGTATTTTTTTGGCTTACTGTCGAAAACGTTGTCTACTATTAAGAAAAAAGAAAATTACTTCAATAGATTTGACATGCTGTTGTTTGTCATGCCAAACGATGGCAGCGGCCATATGCATGAGTGAGATGGACAAATTATTTTGTCGGTCCCTCTTTATTACATTGATGTGGATGCATCAAGACAGAAGCTCTATTTTTGATATGCAAGACAGAGCTTCAAGACTGAAGCTCTATTGGAGTAGTTATGGATTTGGATATTGTGATTTACCAAGAGGAGATAATACAACTATATAAGGTGTTGTAAAGGTCCATTGCAAGCGGATGAAATCTGTCAATAAGGGATGAATCAGTTTCCTGCTCCAAGACAGAAAAATCTCTTCAATGTAGATGTAGTTATGCATTTTGGATTTTGTGCCATACCAATTACATATAGATGAATGTTAGAATACAAAAAATAAAGGTCATGTAAAGGGGACTACCCTGTCGACATTATCTAAATCCTCTGCCATTCTAGTTTTTGTATCTCTTGTTGAATGTGGTAGTTGTGGACCTGTGGTTCAATTCTATTAATTACTTAATTGAATGTCTTGTGAATTTTTTCTGCTTGTTTTGATTTATAAGATTTAACATCAATATCCAGAACTTCTATTATTATGTCGTGTTATGGTCTCTTCATCTTGTGCTGCTCTTTAGTTATTGATTGTTGTATCACTTTGTCCAATCTTTTTAGTTTAACCTATGCTTGCAGATTTTTTCTTGTCGGTTGGGCTTGGCCTTGGGAGCACTGATACTCCCCCGGTGAGATTGCGAAAGAGCATCAGTAATGAAAGAACGTTTGCAGCCACCGCTGATGAAAGATTAATTTTCCAGAAACTTGGTAACTGCTCCTTTTTTTTCTTTTTTATTTATTTATTTTATTTATAAAAACATTACCGTTATTTGAACTTTTACTGCATGAGCATGATAGTCTGGGTTGCTAGTTTGACATTCTATTGAAATTTTCCTCCAAACTCAAATTCCAAATTTTCCCTCAGCTTTATCTTCAGAGTTTATTCATGGATATTGAGTTTGAATATACCTCCCTTATGCTTGGACTTTGTCCTCCTTTATACGGGTTTGATGTATTTTTATTTCACTATTTTTTCTTGTTGATTAAATTTGAGAAAACAATATGATGATAGGTGACGTTTTTATTATTTTGGTCATCATTTAGAAGACTGGCAGTAGAGAGAGACTAGTATTTGCTTTGGGAGCAGGAAAATGAATATGCTGTAATTAACTTCTTCAACCAAAGCACTAGAAAATCGAACAGTTGCCCAAAGATTACTCTGTAAATTATTGTGGTAACAAATACCTTGAATGTTAGTATTTTTTACCAGTAATCTTGTAAATCTTGTATAAATTGCAGCTGACCTTGCGGAGATGCTATCTATGGACATGCAAAAGGAAGGTCTTAGTGGGCGGACACTGACTGTTAAACTAAAAACTGCATCCTTTGAGGTACATATTAGCCTGAATTCTGTTTAGTCTGCTCAGATCGAATAGTGTAGAAGAAAATCCTCATTTTTAATATGTTGTTGAGATTTCAGTACCCACATGTTAAGTTGTGAATTCATTAACTCTACTCTGTCTTTCTTCTCGCCATTCTTGATTTGATTTTACTGCTCGAATTTACTTGTATAATCTACAGGTTAGAACCAGAGCTGTAACTTTGCAAAAATATATTTGCTCCAGCAGTGACATCTTACAACATGCATCAAAGCTGCTAAAGGCTGAACTGCCTATTTCTCTGAGATTAATCGGTTAGTTCTTGATTTTATAACTTGTTTCCTTCTTAAAAAGTGCTGATAAAATAACTTAGAGTTCATTTTTCACTAAAGTAGATCTCGTTTGCTTGGTTTTCTATGTACTTATATGCTCATAATATGATCCACTGTATATCTGGCTTATGGTGAAGAGTAAACTTTGAAATTCTTGATCTTGCACCATGTATTATTTACATTATACAGAGGAATTTTACTTCTTCAGGGCTGCGGATATCTCACTTCAACGAAGACAAGGCCATTGTTGAGTCTGATCCGACCCAGAGATCTATTACTAGATTTATTATATCGGGAGATGCTACCAGAAAGAGTGTGGGTGATTGTTGCTCCCTAAATCCTGACTCCGACGACCACGGCTTCATGAACGACAATGAAATTGATGTATTCATCAACGGTACTGAAACACACCATCAGGATTGTGGCGATCCAAGAATTGGCAACAATTTCTTGAATATGGATGACAGTAACTGTACATTTGGCAATGATGTCGAGTTGGAGAAATTTAAGAATCTTTCAAGCAACGTCAGTACTGATCAGGTATGTACAGATCAAAGACTGGATTATGGATCATCATCTTTCTTGCTACTGGCACTAAATTGAAACGTAACTAAAATGTATTCCATGAAGTATGTTTACGGCTCTACCTCTACAGATAGCTTTGATGTAATTACAATACGTGTAGGTGGACAATCTTAATGCTATAGAAAGCATTTCGAATTGCTCTGCTGCCTCCGTCTCGGAAGCACCCATAGCGGCATGTGCTTCTCTTCCTGGAAACCTCGAGGGCAAGTACGATAATAATGTGGCTGCCAGAACTCATGTCAATGAGGTAAGATCACCGGATAACGATGGACAGATATGGTGGATCGATGACTACAAATGTACAATCTGTGGTGCTGAATTACCAGTGAGTTTTGTTGACGAAAGACAAGAGCACATAGATTTTCACATTGCGGAAAAACTTCAGGAAGAAGAATCTGGCATTCGCTCGAGAACCCTTATGCCAAGGCAAAGGTAAAATTCTAGATTGTAGTGTTGGTGATCTTATTTTATACTCTGGGATTGAGTTGGAATTTTGTTTTAACTACAACTGAGTCGGCTATTACGCCCATTCTTAATACGGTGTCCATATCATTACGTGAATTGGAATATGATGAGAGAATCTTCAGCTGAAATCATTGAGAAAAAGGATTGAATGATTTGTGAAGTTGAAATCTAAATTCTTAAAAGGTAATAGTGGGCAAACCGTAAACGAACATCGCAAAGACCCTTGGTATATGGATTAATGTCGGGTTGAACGTCGAGGATGCTTGATGCATGTATTTTTAGAAAACAAACATTTTAGATGTGTTTTTATCAAATAATAGGTGATCAAGGCTTGAAGACATGTTTTTATTATCATGGTTGTACTATTCCTTGTAATTTGCGTTGTTCTAACAAGTCTAAATCTACCAGGATTGCTGACAAGACTCAACTGTCAAGTCAAAGGAAGCAGAAAAAGCAAAAGTCAACTCCGAAGAAAGAGGTCAAACATATTCCTATTGACTTATTCTTCGTGAAGAGCAATCAGAACTTATAATATTTTAAAATTTATTTGTTGTATATATTTGTTCATATGCCATGAGATTCAAATTTTTATTTTTCTTATGCAGCATCATAAATTTGTACACAAGTATAGTAAAAATATATTGTCTTGCCGAATATCCTAATAATTAATCAGTTTTTTTTTCATTTATTA

mRNA sequence

CAGGAAGCTTCGGCTTCGGGACCTGAAGATTCATGGAAAGCAGCGAGACCGCCGGCGATGCCGATTGTCCATGGCAATCTTACCACACTGTCTATACCAATGCGAAAGCCGGTATGGAAGGAGTTGACAAGGAAAGAGTGCAAAGAATTGTTTATGAAATGAGTAAAGGGTCAAAATATTTTGAAAATGAGGAACGTAAAGAGGCCATTATCAGAGAAAAGATTGAGAAGATGCGAGCTAGGTGTGTACAACTTACTGCTACGGATCTTTCTCACTATGAAAAGGTTGCAGATAAAAGAACTTTTGAGCTAGAAAGTACACGAGACCTATCAAGGATATGGTTGCATGTAGATATGGATGCTTTCTATGCCGCTGTTGAAACTTTAAGCAATTCTTCATTAGAGGGCAAGCCGATGGCTGTTGGTAGTATGTCTATGATTTCCACAGCTAACTATGAGGCTCGAAGATATGGTGTTCGAGCTGCAATGCCTGGTTTTATTGCACGTAGATTATGTCCAGAGTTAATCTTTGTTCCTGTAGATTTCAAAAAGTACACTTATTACAGTGATTTAACTAGGAAAGTATTCCATAGGTATGATCCCAACTTCTTGGCTGCTAGTCTGGATGAAGCATACCTCGATATAACTGAAGTCTGCAAAGAAAGAGGCCTAACAAGTGAAGAAATTGCTAGTGATCTCAGAACCAGTATTTATGAAGAGACTGGTCTTACGTGTAGTGCTGGGGTTGCTGCCAACCGGCTACTTGCCAAGGTCTGCTCGGACATTAACAAACCAAATGGACAATTCATTTTACCAAATGACCGGAGAGCTATATTGGCATTTATATCATCACTACCCATAAGAAAGATTGGTGGCATTGGAAAGGTCACAGAACATATCTTAAGGGATGCTTTTGGAATTAATACATGTGAGGACATGCTGCAGAAAGGTGGACACCTCTGTGCGTTGTTTTCTCAATCCTCAGCAGATTTTTTCTTGTCGGTTGGGCTTGGCCTTGGGAGCACTGATACTCCCCCGGTGAGATTGCGAAAGAGCATCAGTAATGAAAGAACGTTTGCAGCCACCGCTGATGAAAGATTAATTTTCCAGAAACTTGCTGACCTTGCGGAGATGCTATCTATGGACATGCAAAAGGAAGGTCTTAGTGGGCGGACACTGACTGTTAAACTAAAAACTGCATCCTTTGAGGTTAGAACCAGAGCTGTAACTTTGCAAAAATATATTTGCTCCAGCAGTGACATCTTACAACATGCATCAAAGCTGCTAAAGGCTGAACTGCCTATTTCTCTGAGATTAATCGGGCTGCGGATATCTCACTTCAACGAAGACAAGGCCATTGTTGAGTCTGATCCGACCCAGAGATCTATTACTAGATTTATTATATCGGGAGATGCTACCAGAAAGAGTGTGGGTGATTGTTGCTCCCTAAATCCTGACTCCGACGACCACGGCTTCATGAACGACAATGAAATTGATGTATTCATCAACGGTACTGAAACACACCATCAGGATTGTGGCGATCCAAGAATTGGCAACAATTTCTTGAATATGGATGACAGTAACTGTACATTTGGCAATGATGTCGAGTTGGAGAAATTTAAGAATCTTTCAAGCAACGTCAGTACTGATCAGGTGGACAATCTTAATGCTATAGAAAGCATTTCGAATTGCTCTGCTGCCTCCGTCTCGGAAGCACCCATAGCGGCATGTGCTTCTCTTCCTGGAAACCTCGAGGGCAAGTACGATAATAATGTGGCTGCCAGAACTCATGTCAATGAGGTAAGATCACCGGATAACGATGGACAGATATGGTGGATCGATGACTACAAATGTACAATCTGTGGTGCTGAATTACCAGTGAGTTTTGTTGACGAAAGACAAGAGCACATAGATTTTCACATTGCGGAAAAACTTCAGGAAGAAGAATCTGGCATTCGCTCGAGAACCCTTATGCCAAGGCAAAGGATTGCTGACAAGACTCAACTGTCAAGTCAAAGGAAGCAGAAAAAGCAAAAGTCAACTCCGAAGAAAGAGGTCAAACATATTCCTATTGACTTATTCTTCGTGAAGAGCAATCAGAACTTATAATATTTTAAAATTTATTTGTTGTATATATTTGTTCATATGCCATGAGATTCAAATTTTTATTTTTCTTATGCAGCATCATAAATTTGTACACAAGTATAGTAAAAATATATTGTCTTGCCGAATATCCTAATAATTAATCAGTTTTTTTTTCATTTATTA

Coding sequence (CDS)

ATGGAAAGCAGCGAGACCGCCGGCGATGCCGATTGTCCATGGCAATCTTACCACACTGTCTATACCAATGCGAAAGCCGGTATGGAAGGAGTTGACAAGGAAAGAGTGCAAAGAATTGTTTATGAAATGAGTAAAGGGTCAAAATATTTTGAAAATGAGGAACGTAAAGAGGCCATTATCAGAGAAAAGATTGAGAAGATGCGAGCTAGGTGTGTACAACTTACTGCTACGGATCTTTCTCACTATGAAAAGGTTGCAGATAAAAGAACTTTTGAGCTAGAAAGTACACGAGACCTATCAAGGATATGGTTGCATGTAGATATGGATGCTTTCTATGCCGCTGTTGAAACTTTAAGCAATTCTTCATTAGAGGGCAAGCCGATGGCTGTTGGTAGTATGTCTATGATTTCCACAGCTAACTATGAGGCTCGAAGATATGGTGTTCGAGCTGCAATGCCTGGTTTTATTGCACGTAGATTATGTCCAGAGTTAATCTTTGTTCCTGTAGATTTCAAAAAGTACACTTATTACAGTGATTTAACTAGGAAAGTATTCCATAGGTATGATCCCAACTTCTTGGCTGCTAGTCTGGATGAAGCATACCTCGATATAACTGAAGTCTGCAAAGAAAGAGGCCTAACAAGTGAAGAAATTGCTAGTGATCTCAGAACCAGTATTTATGAAGAGACTGGTCTTACGTGTAGTGCTGGGGTTGCTGCCAACCGGCTACTTGCCAAGGTCTGCTCGGACATTAACAAACCAAATGGACAATTCATTTTACCAAATGACCGGAGAGCTATATTGGCATTTATATCATCACTACCCATAAGAAAGATTGGTGGCATTGGAAAGGTCACAGAACATATCTTAAGGGATGCTTTTGGAATTAATACATGTGAGGACATGCTGCAGAAAGGTGGACACCTCTGTGCGTTGTTTTCTCAATCCTCAGCAGATTTTTTCTTGTCGGTTGGGCTTGGCCTTGGGAGCACTGATACTCCCCCGGTGAGATTGCGAAAGAGCATCAGTAATGAAAGAACGTTTGCAGCCACCGCTGATGAAAGATTAATTTTCCAGAAACTTGCTGACCTTGCGGAGATGCTATCTATGGACATGCAAAAGGAAGGTCTTAGTGGGCGGACACTGACTGTTAAACTAAAAACTGCATCCTTTGAGGTTAGAACCAGAGCTGTAACTTTGCAAAAATATATTTGCTCCAGCAGTGACATCTTACAACATGCATCAAAGCTGCTAAAGGCTGAACTGCCTATTTCTCTGAGATTAATCGGGCTGCGGATATCTCACTTCAACGAAGACAAGGCCATTGTTGAGTCTGATCCGACCCAGAGATCTATTACTAGATTTATTATATCGGGAGATGCTACCAGAAAGAGTGTGGGTGATTGTTGCTCCCTAAATCCTGACTCCGACGACCACGGCTTCATGAACGACAATGAAATTGATGTATTCATCAACGGTACTGAAACACACCATCAGGATTGTGGCGATCCAAGAATTGGCAACAATTTCTTGAATATGGATGACAGTAACTGTACATTTGGCAATGATGTCGAGTTGGAGAAATTTAAGAATCTTTCAAGCAACGTCAGTACTGATCAGGTGGACAATCTTAATGCTATAGAAAGCATTTCGAATTGCTCTGCTGCCTCCGTCTCGGAAGCACCCATAGCGGCATGTGCTTCTCTTCCTGGAAACCTCGAGGGCAAGTACGATAATAATGTGGCTGCCAGAACTCATGTCAATGAGGTAAGATCACCGGATAACGATGGACAGATATGGTGGATCGATGACTACAAATGTACAATCTGTGGTGCTGAATTACCAGTGAGTTTTGTTGACGAAAGACAAGAGCACATAGATTTTCACATTGCGGAAAAACTTCAGGAAGAAGAATCTGGCATTCGCTCGAGAACCCTTATGCCAAGGCAAAGGATTGCTGACAAGACTCAACTGTCAAGTCAAAGGAAGCAGAAAAAGCAAAAGTCAACTCCGAAGAAAGAGGTCAAACATATTCCTATTGACTTATTCTTCGTGAAGAGCAATCAGAACTTATAA

Protein sequence

MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAIIREKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSNSSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCEDMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQKLADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHGFMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIWWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSSQRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL

Homology

[Close]

BLAST of MC04g0612 vs. ExPASy Swiss-Prot
Match: Q6JDV7 (DNA polymerase kappa OS=Arabidopsis thaliana OX=3702 GN=POLK PE=1 SV=1)

HSP 1 Score: 776.2 bits (2003), Expect = 3.2e-223
Identity = 420/705 (59.57%), Postives = 516/705 (73.19%), Query Frame = 0


Query: 2   ESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAIIR 61
           ESS T  ++  PW+SY+TV+TNAKAGMEGVDKE+VQR+VYEMSKGSKYF+NEERKEA+++
Sbjct: 5   ESSST-NNSSRPWESYNTVFTNAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEALMK 64

Query: 62  EKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSNS 121
           +KIE MR RC +L++ DLS+Y+KV DKR  ELE+TRDLSRIWLHVDMDAFYAAVETLS+ 
Sbjct: 65  QKIEHMRDRCAKLSSLDLSNYQKVVDKRILELEATRDLSRIWLHVDMDAFYAAVETLSDP 124

Query: 122 SLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDLT 181
           S++GKPMAVG +SMISTANYEAR++GVRAAMPGFIAR+LCP+LIFVPVDF KYT+YSDLT
Sbjct: 125 SIKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLT 184

Query: 182 RKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAAN 241
           RKVF  YDP+F+A SLDEAYLDITEVC+ERGL+  EIA +LR+S+Y ETGLTCSAGVAAN
Sbjct: 185 RKVFRNYDPHFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGVAAN 244

Query: 242 RLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCED 301
           RLLAKVCSDINKPNGQF+L NDR  ++ F+S LP+RKIGGIGKVTEHIL+DA GI TCE+
Sbjct: 245 RLLAKVCSDINKPNGQFVLQNDRSTVMTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEE 304

Query: 302 MLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQKL 361
           M+QKG  L ALFSQSSADFFLSVGLGLG T+TP VR RKSIS+ERTFAAT DERL++ KL
Sbjct: 305 MVQKGSLLYALFSQSSADFFLSVGLGLGGTNTPQVRSRKSISSERTFAATGDERLLYSKL 364

Query: 362 ADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKAE 421
            +LAEMLS DM+KEGL+ RTLT+KLKTASFE+R+RAV+LQ+Y CSS DIL+HA+KLLKAE
Sbjct: 365 DELAEMLSHDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKAE 424

Query: 422 LPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKS--VGDCCSLNPDSDDH 481
           LP+S+RLIGLR+S F E+  I  SDP+Q +IT+FI+  D++R++  + D  S + D++ +
Sbjct: 425 LPVSVRLIGLRMSQFVEE--IRNSDPSQGTITKFIVQKDSSRQAQDLDDNDSFDLDANKN 484

Query: 482 GFMNDNEIDVFINGTETHHQ--------------DCGDPRIGNNFLNMDDSNCTFGNDVE 541
              ND   +V     ET                 D G        +  ++       D  
Sbjct: 485 CLSNDESGNVSFGSHETSSAHLKDVVEYEERSQIDSGKVIPNQECMKKEERLQILEGDSL 544

Query: 542 LEKFKNLSSNVSTDQVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAART 601
           L+K+K    + S    DN NA E++S                             V  +T
Sbjct: 545 LKKYKECKPDTSHSMNDNSNATEAVS-----------------------------VFPQT 604

Query: 602 HVNEVRSPDNDGQIWWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRT 661
                        ++WID YKC +CG ELP SFV+ERQEH DFH+A++LQ EE+G  S T
Sbjct: 605 E-----------PLYWIDGYKCVLCGIELPPSFVEERQEHSDFHLAQRLQNEETGSSSST 664

Query: 662 LMPRQRIADKTQLSSQRKQKKQKSTPKKEVKHIPIDLFFVKSNQN 691
              ++RI  K +++S  K KKQK   K   KHIPI  FF KSNQN
Sbjct: 665 TPSKRRILGKEKVNS--KPKKQKPDQKDSSKHIPIHAFFTKSNQN 664

[Close]

BLAST of MC04g0612 vs. ExPASy Swiss-Prot
Match: Q9QUG2 (DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=1 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-99
Identity = 216/525 (41.14%), Postives = 302/525 (57.52%), Query Frame = 0


Query: 25  KAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAIIREKIEKMRARCVQLTATDLSHYEK 84
           KAGMEG+DKE++ +I+ E +KGS+++ NE +KE  + ++IE M  +  Q+T+  L   + 
Sbjct: 24  KAGMEGLDKEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQL 83

Query: 85  VADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSNSSLEGKPMAVGSMSMISTANYEAR 144
             DK   ELE  R+L+   +HVDMDAFYAAVE   N  L+ KP+AVGSMSM++T+NY AR
Sbjct: 84  QVDKFAMELERNRNLNNTIVHVDMDAFYAAVEMRDNPELKDKPIAVGSMSMLATSNYHAR 143

Query: 145 RYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDI 204
           R+GVRAAMPGFIA+RLCP+LI VP +F KY   S   +++   YDPNF+A SLDEAYL+I
Sbjct: 144 RFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNI 203

Query: 205 TEVCKER----------------------------------------------------- 264
           T+  +ER                                                     
Sbjct: 204 TQHLQERQDWPEDKRRYFIKMGNYLKIDTPRQEANELTEYERSISPLLFEDSPPDLQPQG 263

Query: 265 ----------------------GLTSEEIASDLRTSIYEETGLTCSAGVAANRLLAKVCS 324
                                 G ++EE+  ++R  I ++T LT SAG+A N +LAKVCS
Sbjct: 264 SPFQLNSEEQNNPQIAQNSVVFGTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCS 323

Query: 325 DINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCEDMLQKGGHL 384
           D NKPNGQ+ +   R A++ FI  LPIRK+ GIGKVTE +L  A GI TC ++ Q+   L
Sbjct: 324 DKNKPNGQYQILPSRSAVMDFIKDLPIRKVSGIGKVTEKMLM-ALGIVTCTELYQQRALL 383

Query: 385 CALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQKLADLAEMLS 444
             LFS++S  +FL + LGLGSTD      RKS+S ERTF+  +     +    +L   L+
Sbjct: 384 SLLFSETSWHYFLHIALGLGSTDLARDGERKSMSVERTFSEISKTEEQYSLCQELCAELA 443

Query: 445 MDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKAEL------P 469
            D+QKEGL GRT+T+KLK  +FEV+TRA T+   I ++ +I   A +LL+ E+      P
Sbjct: 444 HDLQKEGLKGRTVTIKLKNVNFEVKTRASTVPAAISTAEEIFAIAKELLRTEVNVGSPHP 503

[Close]

BLAST of MC04g0612 vs. ExPASy Swiss-Prot
Match: Q9UBT6 (DNA polymerase kappa OS=Homo sapiens OX=9606 GN=POLK PE=1 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.2e-98
Identity = 219/535 (40.93%), Postives = 307/535 (57.38%), Query Frame = 0


Query: 25  KAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAIIREKIEKMRARCVQLTATDLSHYEK 84
           KAGMEG+DKE++ +I+ E +KGS+++ NE +KE  + ++IE M  +  Q+T+  L   + 
Sbjct: 25  KAGMEGLDKEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQL 84

Query: 85  VADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSNSSLEGKPMAVGSMSMISTANYEAR 144
             D+   ELE +R+LS   +H+DMDAFYAAVE   N  L+ KP+AVGSMSM+ST+NY AR
Sbjct: 85  QVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHAR 144

Query: 145 RYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDI 204
           R+GVRAAMPGFIA+RLCP+LI VP +F KY   S   +++   YDPNF+A SLDEAYL+I
Sbjct: 145 RFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNI 204

Query: 205 TEVCKER----------------------------------------------------- 264
           T+  +ER                                                     
Sbjct: 205 TKHLEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPG 264

Query: 265 ----------------------GLTSEEIASDLRTSIYEETGLTCSAGVAANRLLAKVCS 324
                                 G +++E+  ++R  I ++T LT SAG+A N +LAKVCS
Sbjct: 265 DPFQVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCS 324

Query: 325 DINKPNGQF-ILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCEDMLQKGGH 384
           D NKPNGQ+ ILPN R+A++ FI  LPIRK+ GIGKVTE +L+ A GI TC ++ Q+   
Sbjct: 325 DKNKPNGQYQILPN-RQAVMDFIKDLPIRKVSGIGKVTEKMLK-ALGIITCTELYQQRAL 384

Query: 385 LCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQKLADLAEML 444
           L  LFS++S  +FL + LGLGST       RKS+S ERTF+        +    +L   L
Sbjct: 385 LSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSEL 444

Query: 445 SMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKAEL------ 478
           + D+QKE L GRT+T+KLK  +FEV+TRA T+   + ++ +I   A +LLK E+      
Sbjct: 445 AQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPH 504

[Close]

BLAST of MC04g0612 vs. ExPASy Swiss-Prot
Match: P34409 (DNA polymerase kappa OS=Caenorhabditis elegans OX=6239 GN=polk-1 PE=3 SV=3)

HSP 1 Score: 295.0 bits (754), Expect = 2.1e-78
Identity = 182/489 (37.22%), Postives = 275/489 (56.24%), Query Frame = 0


Query: 21  YTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAIIREKIEKMRARCVQLTATDLS 80
           + + KAGM G+DKE++ +++ E +  S Y    +++++ I EK+ +++ R    T  +  
Sbjct: 4   FNDNKAGMNGLDKEKITKVIEENTSAS-YSSFSKKQQSRIEEKVLEIKNRLQTATREERQ 63

Query: 81  HYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSNSSLEGKPMAVGSMSMISTAN 140
             E + +    +LES+RDLSR  + +DMDA++AAVE   N +L   PMAVGS +M+ST+N
Sbjct: 64  KSEILMENLEMKLESSRDLSRDCVCIDMDAYFAAVEMRDNPALRTVPMAVGSSAMLSTSN 123

Query: 141 YEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEA 200
           Y ARR+GVRA MPGFI+ +LCP L  VP ++ KYT  S    ++F  YD +    SLDEA
Sbjct: 124 YLARRFGVRAGMPGFISNKLCPSLTIVPGNYPKYTKVSRQFSQIFMEYDSDVGMMSLDEA 183

Query: 201 YLDITE------------------------------------------VCK--------- 260
           ++D+T+                                          +C          
Sbjct: 184 FIDLTDYVASNTEKKTFKRHRFGGDCPCWLPRFDENENTLEDLKIEESICPKCEKSRKIY 243

Query: 261 ----ERGLTSEEIASDLRTSIYEETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRR 320
               E G   EE   ++R  + + TGLTCSAG+A+N +LAK+CSD+NKPNGQ++L ND+ 
Sbjct: 244 YDHVEFGTGREEAVREIRFRVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQYVLENDKN 303

Query: 321 AILAFISSLPIRKIGGIGKVTEHILRDAFGINTCEDMLQKGGHLCALFSQSSADFFLSVG 380
           AI+ F+  LPIRK+GGIG+V E  L+ A  I T  DM  K       F+  S + FL   
Sbjct: 304 AIMEFLKDLPIRKVGGIGRVCEAQLK-AMDIQTVGDMNLKKNLYPLCFTPLSQESFLRTA 363

Query: 381 LGLGSTDTPPVRLRKSISNERTFAATADERLIFQKLADLAEMLSMDMQKEGL-SGRTLTV 440
           LGL    +     RKSIS ERTF+ T+D  ++ ++  ++  ML  D++K G+  G+T+T+
Sbjct: 364 LGLPGRPSESDPRRKSISVERTFSPTSDFNILLEEHQEICRMLEEDVRKSGIVGGKTVTL 423

Query: 441 KLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKAELPISLRLIGLRISHFNEDKAIVE 454
           KLK +SF+V TR++T    + S  DI + + +LL+ E    +RL+G+R+S     + I E
Sbjct: 424 KLKLSSFDVLTRSLTPSDVVKSLEDIQKFSLELLEKEKGKEIRLLGVRLS-----QLIFE 483

[Close]

BLAST of MC04g0612 vs. ExPASy Swiss-Prot
Match: O74944 (DNA polymerase kappa OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mug40 PE=1 SV=3)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-71
Identity = 159/425 (37.41%), Postives = 256/425 (60.24%), Query Frame = 0


Query: 25  KAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAIIREKIEKM---------RARCVQLT 84
           K+G E V+++++  I+YE SKGSK+FE E++++  +R +IEK+         + R  +  
Sbjct: 45  KSGQENVNQKKINEIIYEASKGSKFFEAEQKRDRELRLRIEKVQVEVEKYQSKLRFDKAF 104

Query: 85  ATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSNSSLEGKPMAVGSMSM 144
             + +  ++  D    +  + RDL++I +HVD DAFYA++E L N  L+  PMAVG  S+
Sbjct: 105 QREWTIRQESVDTTVEDFRAKRDLTQIIVHVDCDAFYASIEELKNPKLKSLPMAVGK-SV 164

Query: 145 ISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDLTRKVFHRYDPNFLAA 204
           + TANY AR++GVR+AMP FIAR++CP+L+ +P++  +Y   S   + V  +YD N   A
Sbjct: 165 LCTANYVARKFGVRSAMPEFIARKICPDLVVIPLNLSEYAIKSKEIQNVLAQYDSNLCPA 224

Query: 205 SLDEAYLDITEVCK--ERGLTSEEI---ASDLRTSIYEETGLTCSAGVAANRLLAKVCSD 264
           S+DE Y+++T   +  E   T E I      +R  ++EETG+T S G+AAN+LLAK+ S+
Sbjct: 225 SIDEFYMNLTSHLRLQELAFTVENITMVVEKIRKQVHEETGVTVSCGIAANKLLAKIASN 284

Query: 265 INKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCEDMLQKGGHLC 324
             KPN QF +P D   I  F++ LP+R++ GIG+V E  L     I TC D+ +    L 
Sbjct: 285 KRKPNNQFFIPFDEIGISKFMNDLPVREVSGIGRVLEQQLL-GLEIKTCGDIQRNLVILS 344

Query: 325 ALFSQSSADFFLSVGLGLGST--DTPPVRLRKSISNERTFAAT-ADERLIFQKLADLAEM 384
            +F   S    L    G G+T  D      RK+I +E TF++  +   +I  KL  L + 
Sbjct: 345 YIFLPKSFQNLLRCSYGFGTTILDEYGESKRKTIGSEATFSSNLSSPSIIEYKLRLLVQN 404

Query: 385 LSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKAELPISLR 433
           +S ++QK GL   ++ +K KT+ F+V T+  ++ ++I S SD+L+ A +LL+   P+++R
Sbjct: 405 VSENLQKRGLVTNSIAIKYKTSEFQVHTKQKSIGQFIHSESDLLKPALQLLRQSYPMTIR 464

[Close]

BLAST of MC04g0612 vs. NCBI nr
Match: XP_022148769.1 (DNA polymerase kappa isoform X1 [Momordica charantia])

HSP 1 Score: 1353 bits (3503), Expect = 0.0
Identity = 691/691 (100.00%), Postives = 691/691 (100.00%), Query Frame = 0


Query: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60
           MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII
Sbjct: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60

Query: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120
           REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN
Sbjct: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120

Query: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180
           SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL
Sbjct: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180

Query: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240
           TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA
Sbjct: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240

Query: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE 300
           NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE
Sbjct: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE 300

Query: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360
           DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK
Sbjct: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360

Query: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420
           LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA
Sbjct: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420

Query: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480
           ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG
Sbjct: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480

Query: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540
           FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ
Sbjct: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540

Query: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600
           VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW
Sbjct: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600

Query: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660
           WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS
Sbjct: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660

Query: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691
           QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL
Sbjct: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691

[Close]

BLAST of MC04g0612 vs. NCBI nr
Match: XP_022148771.1 (DNA polymerase kappa isoform X2 [Momordica charantia])

HSP 1 Score: 1335 bits (3455), Expect = 0.0
Identity = 685/691 (99.13%), Postives = 685/691 (99.13%), Query Frame = 0


Query: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60
           MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII
Sbjct: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60

Query: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120
           REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN
Sbjct: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120

Query: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180
           SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL
Sbjct: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180

Query: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240
           TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA
Sbjct: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240

Query: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE 300
           NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRK      VTEHILRDAFGINTCE
Sbjct: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRK------VTEHILRDAFGINTCE 300

Query: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360
           DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK
Sbjct: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360

Query: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420
           LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA
Sbjct: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420

Query: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480
           ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG
Sbjct: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480

Query: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540
           FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ
Sbjct: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540

Query: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600
           VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW
Sbjct: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600

Query: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660
           WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS
Sbjct: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660

Query: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691
           QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL
Sbjct: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 685

[Close]

BLAST of MC04g0612 vs. NCBI nr
Match: XP_022148772.1 (DNA polymerase kappa isoform X3 [Momordica charantia])

HSP 1 Score: 1286 bits (3328), Expect = 0.0
Identity = 665/691 (96.24%), Postives = 665/691 (96.24%), Query Frame = 0


Query: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60
           MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII
Sbjct: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60

Query: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120
           REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN
Sbjct: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120

Query: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180
           SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL
Sbjct: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180

Query: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240
           TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA
Sbjct: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240

Query: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE 300
           NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRK                      
Sbjct: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRK---------------------- 300

Query: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360
               KGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK
Sbjct: 301 ----KGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360

Query: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420
           LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA
Sbjct: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420

Query: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480
           ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG
Sbjct: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480

Query: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540
           FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ
Sbjct: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540

Query: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600
           VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW
Sbjct: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600

Query: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660
           WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS
Sbjct: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660

Query: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691
           QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL
Sbjct: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 665

[Close]

BLAST of MC04g0612 vs. NCBI nr
Match: XP_022148773.1 (DNA polymerase kappa isoform X4 [Momordica charantia])

HSP 1 Score: 1145 bits (2961), Expect = 0.0
Identity = 584/584 (100.00%), Postives = 584/584 (100.00%), Query Frame = 0


Query: 108 MDAFYAAVETLSNSSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFV 167
           MDAFYAAVETLSNSSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFV
Sbjct: 1   MDAFYAAVETLSNSSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFV 60

Query: 168 PVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIY 227
           PVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIY
Sbjct: 61  PVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIY 120

Query: 228 EETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTE 287
           EETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTE
Sbjct: 121 EETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTE 180

Query: 288 HILRDAFGINTCEDMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERT 347
           HILRDAFGINTCEDMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERT
Sbjct: 181 HILRDAFGINTCEDMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERT 240

Query: 348 FAATADERLIFQKLADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSS 407
           FAATADERLIFQKLADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSS
Sbjct: 241 FAATADERLIFQKLADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSS 300

Query: 408 SDILQHASKLLKAELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVG 467
           SDILQHASKLLKAELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVG
Sbjct: 301 SDILQHASKLLKAELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVG 360

Query: 468 DCCSLNPDSDDHGFMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELE 527
           DCCSLNPDSDDHGFMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELE
Sbjct: 361 DCCSLNPDSDDHGFMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELE 420

Query: 528 KFKNLSSNVSTDQVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHV 587
           KFKNLSSNVSTDQVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHV
Sbjct: 421 KFKNLSSNVSTDQVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHV 480

Query: 588 NEVRSPDNDGQIWWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLM 647
           NEVRSPDNDGQIWWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLM
Sbjct: 481 NEVRSPDNDGQIWWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLM 540

Query: 648 PRQRIADKTQLSSQRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691
           PRQRIADKTQLSSQRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL
Sbjct: 541 PRQRIADKTQLSSQRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 584

[Close]

BLAST of MC04g0612 vs. NCBI nr
Match: XP_023553787.1 (DNA polymerase kappa isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1115 bits (2885), Expect = 0.0
Identity = 577/690 (83.62%), Postives = 615/690 (89.13%), Query Frame = 0


Query: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60
           M   +  GD D PWQSY+TVYTNAKAGMEGVDKE+VQRIVYEMSKGSKYFENEERKE II
Sbjct: 1   MGKKQIDGDGDRPWQSYNTVYTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEERKEVII 60

Query: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120
           REKIEKMRARC+QLTATDLS Y+KVADKR  ELESTRDLSRIWLHVDMDAFYAAVETLSN
Sbjct: 61  REKIEKMRARCMQLTATDLSQYQKVADKRILELESTRDLSRIWLHVDMDAFYAAVETLSN 120

Query: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180
             LEGKPMAVGSMSMISTANYEAR+YGVRAAMPGFIARRLCPELIFVP DFKKY YYSDL
Sbjct: 121 PLLEGKPMAVGSMSMISTANYEARKYGVRAAMPGFIARRLCPELIFVPTDFKKYNYYSDL 180

Query: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240
            RKVF RYDPNFLAASLDEAYLDITEVCK+RGLTSE+IA DLRTSIYEETGLTCSAGVAA
Sbjct: 181 ARKVFRRYDPNFLAASLDEAYLDITEVCKDRGLTSEQIAMDLRTSIYEETGLTCSAGVAA 240

Query: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE 300
           NRLLAKVCSDINKPNGQFILPNDRRAI+ F+SSLPIRKIGGIGKVTEHIL+DA GINTCE
Sbjct: 241 NRLLAKVCSDINKPNGQFILPNDRRAIVTFVSSLPIRKIGGIGKVTEHILKDALGINTCE 300

Query: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360
           +MLQKGGHLCALFS SSADFFLSVGLGLGSTDTP VRLRKSISNERTFAATA+E+LIFQK
Sbjct: 301 EMLQKGGHLCALFSISSADFFLSVGLGLGSTDTPQVRLRKSISNERTFAATAEEKLIFQK 360

Query: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420
           LADLAEMLSMDM+KEGLSGRTLT+KLKTASFEVRTRAVTLQ+YICSSSDILQHASKLLKA
Sbjct: 361 LADLAEMLSMDMEKEGLSGRTLTLKLKTASFEVRTRAVTLQQYICSSSDILQHASKLLKA 420

Query: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480
           ELPISLRLIGLRISHFNED AI  SDP Q  ITRFI SGDATRK++GDCC+L+PD + H 
Sbjct: 421 ELPISLRLIGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNMGDCCTLSPDPNVHS 480

Query: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVEL-EKFKNLSSNVSTD 540
           FM+++EIDVFINGTETHHQD   PR+GNN  NMDD NCT  ND E  EKFKNLSSNVSTD
Sbjct: 481 FMDESEIDVFINGTETHHQDSSHPRVGNNPSNMDDRNCTSSNDAEKSEKFKNLSSNVSTD 540

Query: 541 QVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQI 600
           QVDN+N            V  A   ACAS P N+EG ++NNV ARTHV E RSPDN+GQ 
Sbjct: 541 QVDNVNGF----------VPRASGTACASSPRNIEGIHNNNVEARTHV-EARSPDNNGQN 600

Query: 601 WWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLS 660
            WIDDYKC ICGAE+P SF+DERQEH+DFHIAEKLQEEESGIRSRTL P +R  DK QL+
Sbjct: 601 LWIDDYKCAICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLT 660

Query: 661 SQRKQKKQKSTPKKEVKHIPIDLFFVKSNQ 689
           SQRKQK+QKSTPKKEVKHIPIDLFFVK+NQ
Sbjct: 661 SQRKQKRQKSTPKKEVKHIPIDLFFVKNNQ 679

[Close]

BLAST of MC04g0612 vs. ExPASy TrEMBL
Match: A0A6J1D4Z5 (DNA polymerase kappa OS=Momordica charantia OX=3673 GN=LOC111017350 PE=3 SV=1)

HSP 1 Score: 1353 bits (3503), Expect = 0.0
Identity = 691/691 (100.00%), Postives = 691/691 (100.00%), Query Frame = 0


Query: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60
           MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII
Sbjct: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60

Query: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120
           REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN
Sbjct: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120

Query: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180
           SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL
Sbjct: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180

Query: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240
           TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA
Sbjct: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240

Query: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE 300
           NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE
Sbjct: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE 300

Query: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360
           DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK
Sbjct: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360

Query: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420
           LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA
Sbjct: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420

Query: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480
           ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG
Sbjct: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480

Query: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540
           FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ
Sbjct: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540

Query: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600
           VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW
Sbjct: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600

Query: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660
           WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS
Sbjct: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660

Query: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691
           QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL
Sbjct: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691

[Close]

BLAST of MC04g0612 vs. ExPASy TrEMBL
Match: A0A6J1D6E2 (DNA polymerase kappa OS=Momordica charantia OX=3673 GN=LOC111017350 PE=4 SV=1)

HSP 1 Score: 1335 bits (3455), Expect = 0.0
Identity = 685/691 (99.13%), Postives = 685/691 (99.13%), Query Frame = 0


Query: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60
           MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII
Sbjct: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60

Query: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120
           REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN
Sbjct: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120

Query: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180
           SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL
Sbjct: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180

Query: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240
           TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA
Sbjct: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240

Query: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE 300
           NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRK      VTEHILRDAFGINTCE
Sbjct: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRK------VTEHILRDAFGINTCE 300

Query: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360
           DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK
Sbjct: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360

Query: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420
           LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA
Sbjct: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420

Query: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480
           ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG
Sbjct: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480

Query: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540
           FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ
Sbjct: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540

Query: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600
           VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW
Sbjct: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600

Query: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660
           WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS
Sbjct: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660

Query: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691
           QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL
Sbjct: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 685

[Close]

BLAST of MC04g0612 vs. ExPASy TrEMBL
Match: A0A6J1D5Z0 (DNA polymerase kappa OS=Momordica charantia OX=3673 GN=LOC111017350 PE=4 SV=1)

HSP 1 Score: 1286 bits (3328), Expect = 0.0
Identity = 665/691 (96.24%), Postives = 665/691 (96.24%), Query Frame = 0


Query: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60
           MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII
Sbjct: 1   MESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAII 60

Query: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120
           REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN
Sbjct: 61  REKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSN 120

Query: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180
           SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL
Sbjct: 121 SSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDL 180

Query: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240
           TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA
Sbjct: 181 TRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAA 240

Query: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCE 300
           NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRK                      
Sbjct: 241 NRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRK---------------------- 300

Query: 301 DMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360
               KGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK
Sbjct: 301 ----KGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQK 360

Query: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420
           LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA
Sbjct: 361 LADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKA 420

Query: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480
           ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG
Sbjct: 421 ELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHG 480

Query: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540
           FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ
Sbjct: 481 FMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELEKFKNLSSNVSTDQ 540

Query: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600
           VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW
Sbjct: 541 VDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIW 600

Query: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660
           WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS
Sbjct: 601 WIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSS 660

Query: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691
           QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL
Sbjct: 661 QRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 665

[Close]

BLAST of MC04g0612 vs. ExPASy TrEMBL
Match: A0A6J1D516 (DNA polymerase kappa OS=Momordica charantia OX=3673 GN=LOC111017350 PE=4 SV=1)

HSP 1 Score: 1145 bits (2961), Expect = 0.0
Identity = 584/584 (100.00%), Postives = 584/584 (100.00%), Query Frame = 0


Query: 108 MDAFYAAVETLSNSSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFV 167
           MDAFYAAVETLSNSSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFV
Sbjct: 1   MDAFYAAVETLSNSSLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFV 60

Query: 168 PVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIY 227
           PVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIY
Sbjct: 61  PVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIY 120

Query: 228 EETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTE 287
           EETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTE
Sbjct: 121 EETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTE 180

Query: 288 HILRDAFGINTCEDMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERT 347
           HILRDAFGINTCEDMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERT
Sbjct: 181 HILRDAFGINTCEDMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERT 240

Query: 348 FAATADERLIFQKLADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSS 407
           FAATADERLIFQKLADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSS
Sbjct: 241 FAATADERLIFQKLADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSS 300

Query: 408 SDILQHASKLLKAELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVG 467
           SDILQHASKLLKAELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVG
Sbjct: 301 SDILQHASKLLKAELPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVG 360

Query: 468 DCCSLNPDSDDHGFMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELE 527
           DCCSLNPDSDDHGFMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELE
Sbjct: 361 DCCSLNPDSDDHGFMNDNEIDVFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVELE 420

Query: 528 KFKNLSSNVSTDQVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHV 587
           KFKNLSSNVSTDQVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHV
Sbjct: 421 KFKNLSSNVSTDQVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHV 480

Query: 588 NEVRSPDNDGQIWWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLM 647
           NEVRSPDNDGQIWWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLM
Sbjct: 481 NEVRSPDNDGQIWWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLM 540

Query: 648 PRQRIADKTQLSSQRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 691
           PRQRIADKTQLSSQRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL
Sbjct: 541 PRQRIADKTQLSSQRKQKKQKSTPKKEVKHIPIDLFFVKSNQNL 584

[Close]

BLAST of MC04g0612 vs. ExPASy TrEMBL
Match: A0A6J1GMD5 (DNA polymerase kappa OS=Cucurbita moschata OX=3662 GN=LOC111455591 PE=3 SV=1)

HSP 1 Score: 1109 bits (2868), Expect = 0.0
Identity = 574/682 (84.16%), Postives = 609/682 (89.30%), Query Frame = 0


Query: 9   DADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAIIREKIEKMR 68
           D D PWQSY+TVYTNAKAGMEGVDKE+VQRIVYEMSKGSKYFENEERKEAIIREKIEKMR
Sbjct: 7   DGDRPWQSYNTVYTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEERKEAIIREKIEKMR 66

Query: 69  ARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSNSSLEGKPM 128
           ARC+QLTATDLS Y+KVADKR  ELE TRDLSRIWLHVDMDAFYAAVETLSN  LEGKPM
Sbjct: 67  ARCMQLTATDLSQYQKVADKRILELEGTRDLSRIWLHVDMDAFYAAVETLSNPLLEGKPM 126

Query: 129 AVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDLTRKVFHRY 188
           AVGSMSMISTANYEAR+YGVRAAMPGFIARRLCPELIFVP DFKKY YYSDL RKVF RY
Sbjct: 127 AVGSMSMISTANYEARKYGVRAAMPGFIARRLCPELIFVPTDFKKYNYYSDLARKVFRRY 186

Query: 189 DPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAANRLLAKVC 248
           DPNFLAASLDEAYLDITEVCK+RGLTSE+IA DLRTSIYEETGLTCSAGVAANRLLAKVC
Sbjct: 187 DPNFLAASLDEAYLDITEVCKDRGLTSEQIAMDLRTSIYEETGLTCSAGVAANRLLAKVC 246

Query: 249 SDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCEDMLQKGGH 308
           SDINKPNGQFILPNDRRAI+ F+SSLPIRKIGGIGKVTEHIL+D  GINTCE+MLQKGGH
Sbjct: 247 SDINKPNGQFILPNDRRAIVTFVSSLPIRKIGGIGKVTEHILKDGLGINTCEEMLQKGGH 306

Query: 309 LCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQKLADLAEML 368
           LCALFS SSADFFLSVGLGLGSTDTP VRLRKSISNERTFAATA+E+LIFQKLADLAEML
Sbjct: 307 LCALFSISSADFFLSVGLGLGSTDTPQVRLRKSISNERTFAATAEEKLIFQKLADLAEML 366

Query: 369 SMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKAELPISLRL 428
           SMDM+KEGLSGRTLT+KLKTASFEVRTRAVTLQ+YICSSSDILQHASKLLKAELPISLRL
Sbjct: 367 SMDMEKEGLSGRTLTLKLKTASFEVRTRAVTLQQYICSSSDILQHASKLLKAELPISLRL 426

Query: 429 IGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKSVGDCCSLNPDSDDHGFMNDNEID 488
           IGLRISHFNED AI  SDP Q  ITRFI SGDATRK++GDCC+ +PD + H FM+++EID
Sbjct: 427 IGLRISHFNEDGAIAGSDPAQTPITRFITSGDATRKNMGDCCTSSPDPNVHSFMDESEID 486

Query: 489 VFINGTETHHQDCGDPRIGNNFLNMDDSNCTFGNDVEL-EKFKNLSSNVSTDQVDNLNAI 548
           VFINGTETHHQD   PR+GNN  NMDD NCT  NDVE  EKFKNLSSNVSTDQVDNLN  
Sbjct: 487 VFINGTETHHQDSSHPRVGNNLSNMDDRNCTSSNDVEKSEKFKNLSSNVSTDQVDNLNGF 546

Query: 549 ESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAARTHVNEVRSPDNDGQIWWIDDYKC 608
                     V      ACAS P NLEG  +NNV ART+V E RSPDN+GQ  WIDDYKC
Sbjct: 547 ----------VPRVSGTACASSPRNLEGNQNNNVEARTNV-EARSPDNNGQNLWIDDYKC 606

Query: 609 TICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRTLMPRQRIADKTQLSSQRKQKKQ 668
            ICGAE+P SF+DERQEH+DFHIAEKLQEEESGIRSRTL P +R  DK QL+SQRKQK+Q
Sbjct: 607 AICGAEVPESFIDERQEHMDFHIAEKLQEEESGIRSRTLTPIRRTPDKNQLASQRKQKRQ 666

Query: 669 KSTPKKEVKHIPIDLFFVKSNQ 689
           KSTPKKEVKHIPIDLFFVK+NQ
Sbjct: 667 KSTPKKEVKHIPIDLFFVKNNQ 677

[Close]

BLAST of MC04g0612 vs. TAIR 10
Match: AT1G49980.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 776.2 bits (2003), Expect = 2.2e-224
Identity = 420/705 (59.57%), Postives = 516/705 (73.19%), Query Frame = 0


Query: 2   ESSETAGDADCPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEAIIR 61
           ESS T  ++  PW+SY+TV+TNAKAGMEGVDKE+VQR+VYEMSKGSKYF+NEERKEA+++
Sbjct: 5   ESSST-NNSSRPWESYNTVFTNAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEALMK 64

Query: 62  EKIEKMRARCVQLTATDLSHYEKVADKRTFELESTRDLSRIWLHVDMDAFYAAVETLSNS 121
           +KIE MR RC +L++ DLS+Y+KV DKR  ELE+TRDLSRIWLHVDMDAFYAAVETLS+ 
Sbjct: 65  QKIEHMRDRCAKLSSLDLSNYQKVVDKRILELEATRDLSRIWLHVDMDAFYAAVETLSDP 124

Query: 122 SLEGKPMAVGSMSMISTANYEARRYGVRAAMPGFIARRLCPELIFVPVDFKKYTYYSDLT 181
           S++GKPMAVG +SMISTANYEAR++GVRAAMPGFIAR+LCP+LIFVPVDF KYT+YSDLT
Sbjct: 125 SIKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLT 184

Query: 182 RKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEEIASDLRTSIYEETGLTCSAGVAAN 241
           RKVF  YDP+F+A SLDEAYLDITEVC+ERGL+  EIA +LR+S+Y ETGLTCSAGVAAN
Sbjct: 185 RKVFRNYDPHFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGVAAN 244

Query: 242 RLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIRKIGGIGKVTEHILRDAFGINTCED 301
           RLLAKVCSDINKPNGQF+L NDR  ++ F+S LP+RKIGGIGKVTEHIL+DA GI TCE+
Sbjct: 245 RLLAKVCSDINKPNGQFVLQNDRSTVMTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEE 304

Query: 302 MLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPPVRLRKSISNERTFAATADERLIFQKL 361
           M+QKG  L ALFSQSSADFFLSVGLGLG T+TP VR RKSIS+ERTFAAT DERL++ KL
Sbjct: 305 MVQKGSLLYALFSQSSADFFLSVGLGLGGTNTPQVRSRKSISSERTFAATGDERLLYSKL 364

Query: 362 ADLAEMLSMDMQKEGLSGRTLTVKLKTASFEVRTRAVTLQKYICSSSDILQHASKLLKAE 421
            +LAEMLS DM+KEGL+ RTLT+KLKTASFE+R+RAV+LQ+Y CSS DIL+HA+KLLKAE
Sbjct: 365 DELAEMLSHDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKAE 424

Query: 422 LPISLRLIGLRISHFNEDKAIVESDPTQRSITRFIISGDATRKS--VGDCCSLNPDSDDH 481
           LP+S+RLIGLR+S F E+  I  SDP+Q +IT+FI+  D++R++  + D  S + D++ +
Sbjct: 425 LPVSVRLIGLRMSQFVEE--IRNSDPSQGTITKFIVQKDSSRQAQDLDDNDSFDLDANKN 484

Query: 482 GFMNDNEIDVFINGTETHHQ--------------DCGDPRIGNNFLNMDDSNCTFGNDVE 541
              ND   +V     ET                 D G        +  ++       D  
Sbjct: 485 CLSNDESGNVSFGSHETSSAHLKDVVEYEERSQIDSGKVIPNQECMKKEERLQILEGDSL 544

Query: 542 LEKFKNLSSNVSTDQVDNLNAIESISNCSAASVSEAPIAACASLPGNLEGKYDNNVAART 601
           L+K+K    + S    DN NA E++S                             V  +T
Sbjct: 545 LKKYKECKPDTSHSMNDNSNATEAVS-----------------------------VFPQT 604

Query: 602 HVNEVRSPDNDGQIWWIDDYKCTICGAELPVSFVDERQEHIDFHIAEKLQEEESGIRSRT 661
                        ++WID YKC +CG ELP SFV+ERQEH DFH+A++LQ EE+G  S T
Sbjct: 605 E-----------PLYWIDGYKCVLCGIELPPSFVEERQEHSDFHLAQRLQNEETGSSSST 664

Query: 662 LMPRQRIADKTQLSSQRKQKKQKSTPKKEVKHIPIDLFFVKSNQN 691
              ++RI  K +++S  K KKQK   K   KHIPI  FF KSNQN
Sbjct: 665 TPSKRRILGKEKVNS--KPKKQKPDQKDSSKHIPIHAFFTKSNQN 664

[Close]

BLAST of MC04g0612 vs. TAIR 10
Match: AT5G44750.1 (DNA-directed DNA polymerases )

HSP 1 Score: 131.0 bits (328), Expect = 3.8e-30
Identity = 92/298 (30.87%), Postives = 150/298 (50.34%), Query Frame = 0


Query: 104 LHVDMDAFYAAVETLSNSSLEGKPMAV------GSMSMISTANYEARRYGVRAAMPGFIA 163
           +H+D+D F+ +V   +   L  KP+AV         + IS+ANY AR YGV+A M    A
Sbjct: 376 IHIDLDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVRHA 435

Query: 164 RRLCPELIFVPVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEE 223
           + LCP+L+ VP +F+ Y   +D    + HR+     A S DEA+LD++++     + +E 
Sbjct: 436 KDLCPQLVIVPYNFEAYEEVADQFYDILHRHCRKVQALSCDEAFLDVSDL---SDVETEV 495

Query: 224 IASDLRTSIYEETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIR 283
           +AS +R  I E TG + SAG+    L+A++ + + KP GQ  +  ++  +  F+  LP+ 
Sbjct: 496 LASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLYISAEK--VEEFLDQLPVG 555

Query: 284 KIGGIGKVTEHILRDAFGINTC-------EDMLQKGGHLCALFSQSSADFFLSVGLGLGS 343
            + G+G V +  L     I TC       +D LQK       F   + +   S   GL  
Sbjct: 556 TLPGVGSVLKEKLVKQ-NIQTCGQLRLISKDSLQKD------FGVKTGEMLWSYSRGLDL 615

Query: 344 TDTPPVRLRKSISNERTFAAT-ADERLIFQKLADLAEMLSMDMQKEGLSGRTLTVKLK 388
                V+  KSI  E  +     D++ +   L  L + +S+ +Q   + GRT T+K+K
Sbjct: 616 RSVTAVQESKSIGAEVNWGVRFRDQQDVQHFLQCLCKEVSLRLQGCEMIGRTFTLKIK 661

[Close]

BLAST of MC04g0612 vs. TAIR 10
Match: AT5G44750.2 (DNA-directed DNA polymerases )

HSP 1 Score: 129.0 bits (323), Expect = 1.4e-29
Identity = 92/302 (30.46%), Postives = 150/302 (49.67%), Query Frame = 0


Query: 104 LHVDMDAFYAAVETLSNSSLEGKPMAV------GSMSMISTANYEARRYGVRAAMPGFIA 163
           +H+D+D F+ +V   +   L  KP+AV         + IS+ANY AR YGV+A M    A
Sbjct: 376 IHIDLDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVRHA 435

Query: 164 RRLCPELIFVPVDFKKYTYYSDLTRKVFHRYDPNFLAASLDEAYLDITEVCKERGLTSEE 223
           + LCP+L+ VP +F+ Y   +D    + HR+     A S DEA+LD++++     + +E 
Sbjct: 436 KDLCPQLVIVPYNFEAYEEVADQFYDILHRHCRKVQALSCDEAFLDVSDL---SDVETEV 495

Query: 224 IASDLRTSIYEETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIR 283
           +AS +R  I E TG + SAG+    L+A++ + + KP GQ  +  ++  +  F+  LP+ 
Sbjct: 496 LASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLYISAEK--VEEFLDQLPVG 555

Query: 284 KIGGIGKVTEHILRDAFGINTC-------EDMLQKGGHLCALFSQSSADFFLSVGLGLGS 343
            + G+G V +  L     I TC       +D LQK       F   + +   S   GL  
Sbjct: 556 TLPGVGSVLKEKLVKQ-NIQTCGQLRLISKDSLQKD------FGVKTGEMLWSYSRGLDL 615

Query: 344 TDTPPVRLRKSISNERTFAATADER-----LIFQKLADLAEMLSMDMQKEGLSGRTLTVK 388
                V+  KSI  E  +     ++     L+   L  L + +S+ +Q   + GRT T+K
Sbjct: 616 RSVTAVQESKSIGAEVNWGVRFRDQQDVFILVQHFLQCLCKEVSLRLQGCEMIGRTFTLK 665

[Close]

BLAST of MC04g0612 vs. TAIR 10
Match: AT5G44740.2 (Y-family DNA polymerase H )

HSP 1 Score: 100.9 bits (250), Expect = 4.2e-21
Identity = 92/356 (25.84%), Postives = 153/356 (42.98%), Query Frame = 0


Query: 100 SRIWLHVDMDAFYAAVETLSNSSLEGKPMAVGSMSM-----ISTANYEARRYGVRAAMPG 159
           +R+  HVDMD FY  VE      L G P AV   +      +   +YEAR+ GV+ +M G
Sbjct: 11  ARVIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRG 70

Query: 160 FIARRLCPELIFVPVDFKKYTYYSDLTRKVFHRYDPNFLA-------ASLDEAYLDITE- 219
             A+  CP++  V V   +     +L R        + LA       AS+DE YLD+T+ 
Sbjct: 71  DEAKAACPQIQLVQVPVARGKADLNLYRSAGSEV-VSILAKSGKCERASIDEVYLDLTDA 130

Query: 220 -------------------------------------------VCKERGLTSEE------ 279
                                                      +C+E     ++      
Sbjct: 131 AESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADRRDKLLSCGI 190

Query: 280 -IASDLRTSIYEETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPI 339
            I ++LR  + +ET  TCSAG+A N++LAK+ S +NKP  Q ++P    A+   +SSLPI
Sbjct: 191 IIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVP--YAAVQELLSSLPI 250

Query: 340 RKIGGIGKVTEHILRDAFGINTCEDMLQ-KGGHLCALFSQSSADFFLSVGLGLGSTDTPP 385
           +K+  +G      L+   G++T  D+LQ     L   +  ++  +  ++  G+   +   
Sbjct: 251 KKMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIARGISGEEVQG 310

[Close]

BLAST of MC04g0612 vs. TAIR 10
Match: AT5G44740.1 (Y-family DNA polymerase H )

HSP 1 Score: 73.6 bits (179), Expect = 7.2e-13
Identity = 50/175 (28.57%), Postives = 90/175 (51.43%), Query Frame = 0


Query: 218 IASDLRTSIYEETGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAILAFISSLPIR 277
           I ++LR  + +ET  TCSAG+A N++LAK+ S +NKP  Q ++P    A+   +SSLPI+
Sbjct: 107 IVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQTVVP--YAAVQELLSSLPIK 166

Query: 278 KIGGIGKVTEHILRDAFGINTCEDMLQ-KGGHLCALFSQSSADFFLSVGLGLGSTDTPPV 337
           K+  +G      L+   G++T  D+LQ     L   +  ++  +  ++  G+   +    
Sbjct: 167 KMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWLWNIARGISGEEVQGR 226

Query: 338 RLRKSISNERTF-------AATADERLIFQKLADLAEMLSMDMQKEGLSGRTLTV 385
            L KS  + +TF       + +  +  + Q   +L+E L  D+++      TLT+
Sbjct: 227 LLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLEQNKRIASTLTL 279

The following BLAST results are available for this feature:

BLAST of MC04g0612 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6JDV7	3.2e-223	59.57	DNA polymerase kappa OS=Arabidopsis thaliana OX=3702 GN=POLK PE=1 SV=1	[more]
Q9QUG2	1.3e-99	41.14	DNA polymerase kappa OS=Mus musculus OX=10090 GN=Polk PE=1 SV=1	[more]
Q9UBT6	3.2e-98	40.93	DNA polymerase kappa OS=Homo sapiens OX=9606 GN=POLK PE=1 SV=1	[more]
P34409	2.1e-78	37.22	DNA polymerase kappa OS=Caenorhabditis elegans OX=6239 GN=polk-1 PE=3 SV=3	[more]
O74944	1.9e-71	37.41	DNA polymerase kappa OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2...	[more]

BLAST of MC04g0612 vs. NCBI nr


Match Name	Identity	Description
XP_022148769.1	100.00	DNA polymerase kappa isoform X1 [Momordica charantia]	[more]
XP_022148771.1	99.13	DNA polymerase kappa isoform X2 [Momordica charantia]	[more]
XP_022148772.1	96.24	DNA polymerase kappa isoform X3 [Momordica charantia]	[more]
XP_022148773.1	100.00	DNA polymerase kappa isoform X4 [Momordica charantia]	[more]
XP_023553787.1	83.62	DNA polymerase kappa isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC04g0612 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1D4Z5	100.00	DNA polymerase kappa OS=Momordica charantia OX=3673 GN=LOC111017350 PE=3 SV=1	[more]
A0A6J1D6E2	99.13	DNA polymerase kappa OS=Momordica charantia OX=3673 GN=LOC111017350 PE=4 SV=1	[more]
A0A6J1D5Z0	96.24	DNA polymerase kappa OS=Momordica charantia OX=3673 GN=LOC111017350 PE=4 SV=1	[more]
A0A6J1D516	100.00	DNA polymerase kappa OS=Momordica charantia OX=3673 GN=LOC111017350 PE=4 SV=1	[more]
A0A6J1GMD5	84.16	DNA polymerase kappa OS=Cucurbita moschata OX=3662 GN=LOC111455591 PE=3 SV=1	[more]

BLAST of MC04g0612 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49980.1	2.2e-224	59.57	DNA/RNA polymerases superfamily protein	[more]
AT5G44750.1	3.8e-30	30.87	DNA-directed DNA polymerases	[more]
AT5G44750.2	1.4e-29	30.46	DNA-directed DNA polymerases	[more]
AT5G44740.2	4.2e-21	25.84	Y-family DNA polymerase H	[more]
AT5G44740.1	7.2e-13	28.57	Y-family DNA polymerase H	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 50..70
None	No IPR available	GENE3D	1.10.150.810		coord: 259..332 e-value: 1.5E-21 score: 78.6
None	No IPR available	GENE3D	3.40.1170.60		coord: 120..168 e-value: 1.6E-58 score: 199.0
None	No IPR available	PIRSF	PIRSF036603	DNA_pol_eta	coord: 212..427 e-value: 1.2E-17 score: 61.7 coord: 489..688 e-value: 0.0016 score: 15.0 coord: 95..216 e-value: 8.2E-16 score: 55.6
None	No IPR available	GENE3D	1.10.150.810		coord: 21..107 e-value: 1.2E-24 score: 89.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 639..674
None	No IPR available	PANTHER	PTHR11076	DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER	coord: 7..666
None	No IPR available	PANTHER	PTHR11076:SF33	DNA POLYMERASE KAPPA	coord: 7..666
IPR036775	DNA polymerase, Y-family, little finger domain superfamily	GENE3D	3.30.1490.100		coord: 337..442 e-value: 2.4E-30 score: 107.1
IPR036775	DNA polymerase, Y-family, little finger domain superfamily	SUPERFAMILY	100879	Lesion bypass DNA polymerase (Y-family), little finger domain	coord: 337..434
IPR001126	UmuC domain	PFAM	PF00817	IMS	coord: 106..249 e-value: 2.5E-45 score: 154.1
IPR001126	UmuC domain	PROSITE	PS50173	UMUC	coord: 103..283 score: 54.082733
IPR017961	DNA polymerase, Y-family, little finger domain	PFAM	PF11799	IMS_C	coord: 336..439 e-value: 6.2E-16 score: 59.2
IPR041298	DNA polymerase eta, ubiquitin-binding zinc finger	PFAM	PF18439	zf_UBZ	coord: 603..637 e-value: 2.1E-7 score: 30.5
IPR041298	DNA polymerase eta, ubiquitin-binding zinc finger	PROSITE	PS51907	ZF_UBZ3	coord: 600..637 score: 20.981537
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 108..258 e-value: 1.6E-58 score: 199.0
IPR022880	DNA polymerase IV	HAMAP	MF_01113	DNApol_IV	coord: 100..452 score: 28.721167
IPR022880	DNA polymerase IV	CDD	cd03586	PolY_Pol_IV_kappa	coord: 104..436 e-value: 6.64561E-141 score: 413.456
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 77..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0612.1	MC04g0612.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042276	error-prone translesion synthesis
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0003697	single-stranded DNA binding