MC04g0582 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0582
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ATP synthase subunit 9, mitochondrial
Location	MC04: 5144483 .. 5144578 (+)
RNA-Seq Expression	MC04g0582
Synteny	MC04g0582

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTCAGTGGGTATTGAAAATGTGTTCAGTTATTTGATCCATTATGTAGTGCGAAATCCATCATTGGCTAAACAATCATTTGATTATGTCATTTTG

mRNA sequence

GCTTCAGTGGGTATTGAAAATGTGTTCAGTTATTTGATCCATTATGTAGTGCGAAATCCATCATTGGCTAAACAATCATTTGATTATGTCATTTTG

Coding sequence (CDS)

GCTTCAGTGGGTATTGAAAATGTGTTCAGTTATTTGATCCATTATGTAGTGCGAAATCCATCATTGGCTAAACAATCATTTGATTATGTCATTTTG

Protein sequence

ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL

Homology

[Close]

BLAST of MC04g0582 vs. ExPASy Swiss-Prot
Match: P60113 (ATP synthase subunit 9, mitochondrial OS=Brassica napus OX=3708 GN=ATP9 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.5e-06
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 33
          A++GI NVFS LIH V RNPSLAKQSF Y IL
Sbjct: 20 AAIGIGNVFSSLIHSVARNPSLAKQSFGYAIL 51

[Close]

BLAST of MC04g0582 vs. ExPASy Swiss-Prot
Match: Q37550 (ATP synthase subunit 9, mitochondrial OS=Malus domestica OX=3750 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.5e-06
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 33
          A++GI NVFS LIH V RNPSLAKQSF Y IL
Sbjct: 20 AAIGIGNVFSSLIHSVARNPSLAKQSFGYAIL 51

[Close]

BLAST of MC04g0582 vs. ExPASy Swiss-Prot
Match: P00840 (ATP synthase subunit 9, mitochondrial OS=Zea mays OX=4577 GN=ATP9 PE=2 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 3.6e-05
Identity = 24/32 (75.00%), Postives = 25/32 (78.12%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 33
          A+VGI NVFS LIH V RNPSLAKQ F Y IL
Sbjct: 20 AAVGIGNVFSSLIHSVARNPSLAKQLFGYAIL 51

[Close]

BLAST of MC04g0582 vs. ExPASy Swiss-Prot
Match: P0C518 (ATP synthase subunit 9, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=ATP9 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.6e-05
Identity = 24/32 (75.00%), Postives = 25/32 (78.12%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 33
          A+VGI NVFS LIH V RNPSLAKQ F Y IL
Sbjct: 20 AAVGIGNVFSSLIHSVARNPSLAKQLFGYAIL 51

[Close]

BLAST of MC04g0582 vs. ExPASy Swiss-Prot
Match: P0C519 (ATP synthase subunit 9, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=ATP9 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.6e-05
Identity = 24/32 (75.00%), Postives = 25/32 (78.12%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 33
          A+VGI NVFS LIH V RNPSLAKQ F Y IL
Sbjct: 20 AAVGIGNVFSSLIHSVARNPSLAKQLFGYAIL 51

[Close]

BLAST of MC04g0582 vs. NCBI nr
Match: XP_037489052.1 (ATP synthase subunit 9, mitochondrial-like [Triticum dicoccoides])

HSP 1 Score: 52.4 bits (124), Expect = 1.60e-07
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+VGI NV SYLIH VVRNPSLAKQSF Y IL
Sbjct: 20 AAVGIGNVLSYLIHSVVRNPSLAKQSFGYAIL 51

[Close]

BLAST of MC04g0582 vs. NCBI nr
Match: KAF7008507.1 (hypothetical protein CFC21_023250 [Triticum aestivum] >VAH46065.1 unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 52.4 bits (124), Expect = 3.30e-07
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+VGI NV SYLIH VVRNPSLAKQSF Y IL
Sbjct: 53 ATVGIGNVLSYLIHSVVRNPSLAKQSFGYAIL 84

[Close]

BLAST of MC04g0582 vs. NCBI nr
Match: XP_007132774.1 (hypothetical protein PHAVU_011G124000g [Phaseolus vulgaris] >ESW04768.1 hypothetical protein PHAVU_011G124000g [Phaseolus vulgaris])

HSP 1 Score: 50.8 bits (120), Expect = 5.63e-07
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+VGI NVFS LIHYV RNPSLAKQ F Y IL
Sbjct: 20 AAVGIGNVFSSLIHYVARNPSLAKQLFGYAIL 51

[Close]

BLAST of MC04g0582 vs. NCBI nr
Match: QYK19223.1 (ATP synthase subunit 9, partial [Pabstiella mirabilis])

HSP 1 Score: 49.7 bits (117), Expect = 1.02e-06
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+VGI NVFS LIH V RNPSLAKQSF Y IL
Sbjct: 20 AAVGIGNVFSSLIHSVARNPSLAKQSFGYAIL 51

[Close]

BLAST of MC04g0582 vs. NCBI nr
Match: KAA0036914.1 (ATP synthase subunit 9 [Cucumis melo var. makuwa])

HSP 1 Score: 50.8 bits (120), Expect = 1.10e-06
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+V I NVFS LIH+VVRNPSLAKQSF Y IL
Sbjct: 27 ATVSIGNVFSSLIHFVVRNPSLAKQSFGYAIL 58

[Close]

BLAST of MC04g0582 vs. ExPASy TrEMBL
Match: A0A446M874 (ATP-synt_C domain-containing protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_2Bv1G119610 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.60e-07
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+VGI NV SYLIH VVRNPSLAKQSF Y IL
Sbjct: 53 ATVGIGNVLSYLIHSVVRNPSLAKQSFGYAIL 84

[Close]

BLAST of MC04g0582 vs. ExPASy TrEMBL
Match: A0A3B6C553 (ATP-synt_C domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.60e-07
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+VGI NV SYLIH VVRNPSLAKQSF Y IL
Sbjct: 53 ATVGIGNVLSYLIHSVVRNPSLAKQSFGYAIL 84

[Close]

BLAST of MC04g0582 vs. ExPASy TrEMBL
Match: V7AIT6 (ATP-synt_C domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G124000g PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.73e-07
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+VGI NVFS LIHYV RNPSLAKQ F Y IL
Sbjct: 20 AAVGIGNVFSSLIHYVARNPSLAKQLFGYAIL 51

[Close]

BLAST of MC04g0582 vs. ExPASy TrEMBL
Match: A0A5A7T080 (ATP synthase subunit 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9475G00040 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 5.31e-07
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+V I NVFS LIH+VVRNPSLAKQSF Y IL
Sbjct: 27 ATVSIGNVFSSLIHFVVRNPSLAKQSFGYAIL 58

[Close]

BLAST of MC04g0582 vs. ExPASy TrEMBL
Match: Q5MFC3 (ATP synthase F0 subunit 9 (Fragment) OS=Amborella trichopoda OX=13333 GN=atp9 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 5.54e-07
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 32
          A+VGI NVFS LIH V RNPSLAKQSF Y IL
Sbjct: 12 AAVGIGNVFSSLIHSVARNPSLAKQSFGYAIL 43

[Close]

BLAST of MC04g0582 vs. TAIR 10
Match: AT2G07671.1 (ATP synthase subunit C family protein )

HSP 1 Score: 49.3 bits (116), Expect = 6.7e-07
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 33
          A++GI NVFS LIH V RNPSLAKQSF Y IL
Sbjct: 31 AAIGIGNVFSSLIHSVARNPSLAKQSFGYAIL 62

[Close]

BLAST of MC04g0582 vs. TAIR 10
Match: ATMG01080.1 (mitochondrial F0-ATPase subunit 9 )

HSP 1 Score: 49.3 bits (116), Expect = 6.7e-07
Identity = 24/32 (75.00%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 1  ASVGIENVFSYLIHYVVRNPSLAKQSFDYVIL 33
          A++GI NVFS LIH V RNPSLAKQSF Y IL
Sbjct: 31 AAIGIGNVFSSLIHSVARNPSLAKQSFGYAIL 62

The following BLAST results are available for this feature:

BLAST of MC04g0582 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P60113	9.5e-06	75.00	ATP synthase subunit 9, mitochondrial OS=Brassica napus OX=3708 GN=ATP9 PE=2 SV=...	[more]
Q37550	9.5e-06	75.00	ATP synthase subunit 9, mitochondrial OS=Malus domestica OX=3750 GN=ATP9 PE=3 SV...	[more]
P00840	3.6e-05	75.00	ATP synthase subunit 9, mitochondrial OS=Zea mays OX=4577 GN=ATP9 PE=2 SV=2	[more]
P0C518	3.6e-05	75.00	ATP synthase subunit 9, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
P0C519	3.6e-05	75.00	ATP synthase subunit 9, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of MC04g0582 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_037489052.1	1.60e-07	81.25	ATP synthase subunit 9, mitochondrial-like [Triticum dicoccoides]	[more]
KAF7008507.1	3.30e-07	81.25	hypothetical protein CFC21_023250 [Triticum aestivum] >VAH46065.1 unnamed protei...	[more]
XP_007132774.1	5.63e-07	78.13	hypothetical protein PHAVU_011G124000g [Phaseolus vulgaris] >ESW04768.1 hypothet...	[more]
QYK19223.1	1.02e-06	78.13	ATP synthase subunit 9, partial [Pabstiella mirabilis]	[more]
KAA0036914.1	1.10e-06	78.13	ATP synthase subunit 9 [Cucumis melo var. makuwa]	[more]

BLAST of MC04g0582 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A446M874	1.60e-07	81.25	ATP-synt_C domain-containing protein OS=Triticum turgidum subsp. durum OX=4567 G...	[more]
A0A3B6C553	1.60e-07	81.25	ATP-synt_C domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1	[more]
V7AIT6	2.73e-07	78.13	ATP-synt_C domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G...	[more]
A0A5A7T080	5.31e-07	78.13	ATP synthase subunit 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9...	[more]
Q5MFC3	5.54e-07	78.13	ATP synthase F0 subunit 9 (Fragment) OS=Amborella trichopoda OX=13333 GN=atp9 PE...	[more]

BLAST of MC04g0582 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07671.1	6.7e-07	75.00	ATP synthase subunit C family protein	[more]
ATMG01080.1	6.7e-07	75.00	mitochondrial F0-ATPase subunit 9	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038662	F1F0 ATP synthase subunit C superfamily	GENE3D	1.20.20.10	F1F0 ATP synthase subunit C	coord: 1..32 e-value: 2.7E-6 score: 29.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0582.1	MC04g0582.1	mRNA