MC04g0498 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0498
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	transcription termination factor MTEF1, chloroplastic
Location	MC04: 4183757 .. 4184587 (-)
RNA-Seq Expression	MC04g0498
Synteny	MC04g0498

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTGGAGCTCTCTCTCGGCCATTCGCCGCCATTTCTTCCTTCTCCCACTCCACCACTCGCCGTCGCGGACCTCGCCGTCTTCCCTCCTCCTTCATCAACTTCCGCACTGCACATCACCAAAACCTTCGCTACCTCAAATCCCTCGGCATCCTCGACCCTCCAGCTCGCAAGTTCCAATCCCCCGACGCAGTCGATCAGATCCTCGCCACCGTCGATTTCCTCAAATCCAAGGGCTTCTCCGACCACGACTTCGCCCGTCTCGCCTCCTCGTGCCCTAATCTCTTCTCCCCCGACTTCGATCCCACCGAAATTGCCCCCGTCTTCGACTTCCTCGCCGCCGATCTCTCCGCCTCGGTCCAAGAATCGCGCGGCCTGATCCTCCGGTGCCCTCAGATCCTCTGCTCCGACGCCGAGCTCTGCCTCCTCCCGACGCTCCGATTCCTCAAGCAATTAGGGATCCGGAATCTGAACTCGCCGAGCAATTTGAACTCGCACCTGCTGAACACTCGCGTGGAGAAATTACGAAGCAAGTTCAGATTCCTGCAGGACATTGGATTGACGCACGAGGAGGCGGCGAGGGTTTGCGCGAGAATGCCGGCGATATTCGGGTACAGTGTAGAGGAGAATCTGCAGCCGAAGATTGAGTATCTGATGAAGGAAATGGAGAGGGAAGTGGAGGAATTGAAAGGATTTCCGCAGTATTTTGCGTTCAGTTTGGAGAGACGAATCGCGCCAAGACATTTGCATCTCAAACAGAGGAACGTTCGAATTCCGCTCAACAGAATGCTGTTGTGGAGTGATAATAGATTTTACACGAAATGGAAA

mRNA sequence

ATGGCGGTTGGAGCTCTCTCTCGGCCATTCGCCGCCATTTCTTCCTTCTCCCACTCCACCACTCGCCGTCGCGGACCTCGCCGTCTTCCCTCCTCCTTCATCAACTTCCGCACTGCACATCACCAAAACCTTCGCTACCTCAAATCCCTCGGCATCCTCGACCCTCCAGCTCGCAAGTTCCAATCCCCCGACGCAGTCGATCAGATCCTCGCCACCGTCGATTTCCTCAAATCCAAGGGCTTCTCCGACCACGACTTCGCCCGTCTCGCCTCCTCGTGCCCTAATCTCTTCTCCCCCGACTTCGATCCCACCGAAATTGCCCCCGTCTTCGACTTCCTCGCCGCCGATCTCTCCGCCTCGGTCCAAGAATCGCGCGGCCTGATCCTCCGGTGCCCTCAGATCCTCTGCTCCGACGCCGAGCTCTGCCTCCTCCCGACGCTCCGATTCCTCAAGCAATTAGGGATCCGGAATCTGAACTCGCCGAGCAATTTGAACTCGCACCTGCTGAACACTCGCGTGGAGAAATTACGAAGCAAGTTCAGATTCCTGCAGGACATTGGATTGACGCACGAGGAGGCGGCGAGGGTTTGCGCGAGAATGCCGGCGATATTCGGGTACAGTGTAGAGGAGAATCTGCAGCCGAAGATTGAGTATCTGATGAAGGAAATGGAGAGGGAAGTGGAGGAATTGAAAGGATTTCCGCAGTATTTTGCGTTCAGTTTGGAGAGACGAATCGCGCCAAGACATTTGCATCTCAAACAGAGGAACGTTCGAATTCCGCTCAACAGAATGCTGTTGTGGAGTGATAATAGATTTTACACGAAATGGAAA

Coding sequence (CDS)

ATGGCGGTTGGAGCTCTCTCTCGGCCATTCGCCGCCATTTCTTCCTTCTCCCACTCCACCACTCGCCGTCGCGGACCTCGCCGTCTTCCCTCCTCCTTCATCAACTTCCGCACTGCACATCACCAAAACCTTCGCTACCTCAAATCCCTCGGCATCCTCGACCCTCCAGCTCGCAAGTTCCAATCCCCCGACGCAGTCGATCAGATCCTCGCCACCGTCGATTTCCTCAAATCCAAGGGCTTCTCCGACCACGACTTCGCCCGTCTCGCCTCCTCGTGCCCTAATCTCTTCTCCCCCGACTTCGATCCCACCGAAATTGCCCCCGTCTTCGACTTCCTCGCCGCCGATCTCTCCGCCTCGGTCCAAGAATCGCGCGGCCTGATCCTCCGGTGCCCTCAGATCCTCTGCTCCGACGCCGAGCTCTGCCTCCTCCCGACGCTCCGATTCCTCAAGCAATTAGGGATCCGGAATCTGAACTCGCCGAGCAATTTGAACTCGCACCTGCTGAACACTCGCGTGGAGAAATTACGAAGCAAGTTCAGATTCCTGCAGGACATTGGATTGACGCACGAGGAGGCGGCGAGGGTTTGCGCGAGAATGCCGGCGATATTCGGGTACAGTGTAGAGGAGAATCTGCAGCCGAAGATTGAGTATCTGATGAAGGAAATGGAGAGGGAAGTGGAGGAATTGAAAGGATTTCCGCAGTATTTTGCGTTCAGTTTGGAGAGACGAATCGCGCCAAGACATTTGCATCTCAAACAGAGGAACGTTCGAATTCCGCTCAACAGAATGCTGTTGTGGAGTGATAATAGATTTTACACGAAATGGAAA

Protein sequence

MAVGALSRPFAAISSFSHSTTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGILDPPARKFQSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSASVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKLRSKFRFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFSLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK

Homology

[Close]

BLAST of MC04g0498 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-34
Identity = 91/237 (38.40%), Postives = 138/237 (58.23%), Query Frame = 0


Query: 42  QNLRYLKSLGILDPPARKFQSPD----AVDQILATVDFLKSKGFSDHDFARLASSCPNLF 101
           + L YL+ L + DP      +P      +  +++    L S G S     R+    P+L 
Sbjct: 35  EKLIYLQDLNV-DPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLL 94

Query: 102 SPDFDPTEIAPVFDFLAADLSASVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRN 161
           + D   +EI PV  FL+ ++S S Q+    I RCP++L S  +  L P L FLK LG   
Sbjct: 95  TSD-PESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 154

Query: 162 LNSPSNLNSHLLNTRVEK-LRSKFRFLQD-IGLTHEEAARVCARMPAIFGYSVEENLQPK 221
            ++ ++ N+ LL + VE+ L  K  +L++ +G T EE A++  R PA+  YSV+ NL PK
Sbjct: 155 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 214

Query: 222 IEYLMKEMEREVEELKGFPQYFAFSLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRF 273
           +E+ ++EM  +V+ELK FPQYF+FSLER+I PRH  LK+  + +PL+ ML  SD +F
Sbjct: 215 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 269

[Close]

BLAST of MC04g0498 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.7e-15
Identity = 69/265 (26.04%), Postives = 124/265 (46.79%), Query Frame = 0


Query: 27  RRLPSSFINFRTAHHQNLRYLKSLGILDPPARK--FQSPDAV-----DQILATVDFLKSK 86
           R +PS  IN  +A  + L YL S+G+     ++   + P  +     + + A + FL   
Sbjct: 207 RHMPSLQINVFSA-QERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGL 266

Query: 87  GFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSASVQESRGLILRCPQILCSDA 146
           G  +    ++ ++ P+LFS   +   + P   +L  ++     +   ++   PQIL    
Sbjct: 267 GIPNSKIGQIVAATPSLFSYSVE-NSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRL 326

Query: 147 ELCLLPTLRFL-KQLGIRNLNSPSNLNSH--LLNTRVEK-LRSKFRFLQDIGLTHEEAAR 206
           ++       FL K+LG    +    +  H  LL+  ++     +  FL+ IG+ + +  +
Sbjct: 327 DITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILK 386

Query: 207 VCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFSLERRIAPRHLHL--- 266
           V   +  +   S+E+NL+PK  YL+ E+  EV  L  +P Y + SL++RI PRH  L   
Sbjct: 387 VLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVEL 446

Query: 267 -KQRNVRIPLNRMLLWSDNRFYTKW 277
            K R    PL+  L+ +D  F  +W
Sbjct: 447 KKVRKGPFPLS-SLVPNDESFCQQW 468

[Close]

BLAST of MC04g0498 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.7e-13
Identity = 64/239 (26.78%), Postives = 106/239 (44.35%), Query Frame = 0


Query: 73  VDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSASVQESRGLILRCP 132
           +++LK  G S  +  RL +  P+L     +     P+  +    L    +  + +++  P
Sbjct: 356 INYLKEFGLSTEEVGRLLAYKPHLMGCSIE-ERWKPLVKYFYY-LGIPKEGMKRILVVKP 415

Query: 133 QILCSDAELCLLPTLRFLKQLGIRNL---NSPSNLNSHLLNTRVEKLRSKFRF-LQDIGL 192
            + C D E  + P +RFL+++GI N    N      S L N+  +K+R    F L   G+
Sbjct: 416 ILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGV 475

Query: 193 THEEAARVCARMPAIFGYSV-----------------------------------EENLQ 252
           T ++  +V A  PA+ G S+                                    +NL+
Sbjct: 476 TQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLR 535

Query: 253 PKIEYLMKEMEREVEELKGFPQYFAFSLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRF 273
           PK  YL + M R +++L  FP++F++SLERRI PRH  + +  V   L  ML  +D  F
Sbjct: 536 PKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEF 592

[Close]

BLAST of MC04g0498 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-12
Identity = 55/207 (26.57%), Postives = 102/207 (49.28%), Query Frame = 0


Query: 67  DQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSASVQESRG 126
           D +  T+ FL++ G   + +A++ S  P + +  +   ++    +FL+   +   +E  G
Sbjct: 266 DNLKPTMAFLETLGIDKNQWAKIISRFPAILT--YSRQKLTSTVEFLSQ--TGLTEEQIG 325

Query: 127 LIL-RCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKLRSKFRFLQD 186
            IL RCP I+    E  L PT+ + + L +               +    L+    F  +
Sbjct: 326 RILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLE 385

Query: 187 IGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFSLERRI 246
            G   +E   + +R  A++ +S++EN+ PK +Y  + M+    EL  FPQ+F +SL+ RI
Sbjct: 386 KGFGLDEIGIMISRYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSLQERI 445

Query: 247 APRHLHLKQRNVRIPLNRMLLWSDNRF 273
            PR+  +++  VR+ LN++L  S   F
Sbjct: 446 KPRYELVQRSGVRLLLNQVLSLSGIEF 467

[Close]

BLAST of MC04g0498 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.2e-09
Identity = 53/215 (24.65%), Postives = 102/215 (47.44%), Query Frame = 0


Query: 67  DQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSASVQESRG 126
           +++   + F ++ G  +    ++    P L S   D T++  +  FLA+ L        G
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSID-TKLTVIVSFLAS-LGLDQDGMIG 171

Query: 127 LIL-RCPQILCSDAELCLLPTLRFLKQ---LGIRNLNSPSNLNSHLLNTRVEK-LRSKFR 186
            +L + P ++    +  L PT  FLK    L    + S       LL   V K L+  + 
Sbjct: 172 KVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYD 231

Query: 187 FLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFSL 246
           +L++ G    + A +    P I   SV+ +LQP+I +L++ M R ++E+  +P++F   L
Sbjct: 232 YLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGL 291

Query: 247 ERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKW 277
           ++++  R   +K+ N+   L  ML  +  +F+ K+
Sbjct: 292 KKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEKF 324

[Close]

BLAST of MC04g0498 vs. NCBI nr
Match: XP_022931610.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 427 bits (1099), Expect = 6.12e-149
Identity = 215/277 (77.62%), Postives = 237/277 (85.56%), Query Frame = 0


Query: 1   MAVGALSRPFAAISSFSHSTTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGILDPPARKF 60
           MAVGALSRPF  ISS SHS T    P   P  F+NFRTAH+ NLRYLKSL +LD  + KF
Sbjct: 1   MAVGALSRPFTTISSLSHSNTPTSRP---PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKF 60

Query: 61  QSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSAS 120
           +SPDAV  ILATV FLKSKGFSD DF  LA  CP LFSPDFDPT+IAPVFDFLAADLSAS
Sbjct: 61  RSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSAS 120

Query: 121 VQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKLRSKF 180
           +QESRG+ILRCP++L SD ELCL PTLRFLKQ+GI NLN+PSNL SHLLNTRVEKLR KF
Sbjct: 121 IQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKF 180

Query: 181 RFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFS 240
           RFLQ++G +HEEAA+VC RMPAIFGYSVEENL+PK EYL+ EMER+VEELK FP YFAFS
Sbjct: 181 RFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFS 240

Query: 241 LERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           LERRIAPRHLHLKQRN+RIPL+RMLLWSD +FYTKWK
Sbjct: 241 LERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK 274

[Close]

BLAST of MC04g0498 vs. NCBI nr
Match: KAG7022425.1 (Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426 bits (1095), Expect = 2.49e-148
Identity = 214/277 (77.26%), Postives = 237/277 (85.56%), Query Frame = 0


Query: 1   MAVGALSRPFAAISSFSHSTTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGILDPPARKF 60
           MAVGALSRPF  ISS SHS T    P   P  F+NFRTAH+ NLRYLKSL +LD  + KF
Sbjct: 1   MAVGALSRPFTTISSLSHSNTPTSRP---PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKF 60

Query: 61  QSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSAS 120
           +SPDAV  ILATV FLKSKGFSD DF  LA  CP LFSPDF+PT+IAPVFDFLAADLSAS
Sbjct: 61  RSPDAVHSILATVHFLKSKGFSDSDFPTLAFLCPQLFSPDFEPTDIAPVFDFLAADLSAS 120

Query: 121 VQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKLRSKF 180
           +QESRG+ILRCP++L SD ELCL PTLRFLKQ+GI NLN+PSNL SHLLNTRVEKLR KF
Sbjct: 121 IQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKF 180

Query: 181 RFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFS 240
           RFLQ++G +HEEAA+VC RMPAIFGYSVEENL+PK EYL+ EMER+VEELK FP YFAFS
Sbjct: 181 RFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFS 240

Query: 241 LERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           LERRIAPRHLHLKQRN+RIPL+RMLLWSD +FYTKWK
Sbjct: 241 LERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK 274

[Close]

BLAST of MC04g0498 vs. NCBI nr
Match: XP_023530124.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424 bits (1091), Expect = 1.17e-147
Identity = 214/278 (76.98%), Postives = 238/278 (85.61%), Query Frame = 0


Query: 1   MAVGALSRPFAAISSFSHSTT-RRRGPRRLPSSFINFRTAHHQNLRYLKSLGILDPPARK 60
           MAVGALSRPF  ISS SHS T   R P   P  F+NFRTAH+ NLRYLKSL +LD  + K
Sbjct: 1   MAVGALSRPFTTISSLSHSDTPTSRPPPPPPPPFLNFRTAHYHNLRYLKSLRLLDSHSTK 60

Query: 61  FQSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSA 120
            +SPDAV  ILATV FLKSKGFSD DF  LA  CP LFSPDF+PT+IAPVFDFLAADLSA
Sbjct: 61  LRSPDAVHSILATVHFLKSKGFSDSDFPTLAFLCPQLFSPDFEPTDIAPVFDFLAADLSA 120

Query: 121 SVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKLRSK 180
           S+QESRG+ILRCP++L SD ELCL PTLRFLKQ+GI NLN+PSNL SHLLNTRVEKLR K
Sbjct: 121 SIQESRGMILRCPKLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGK 180

Query: 181 FRFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAF 240
           FRFLQ++G +HEEAA+VC RMPA+FGYSVEENL+PK EYL+ EMER+VEELK FPQYFAF
Sbjct: 181 FRFLQELGFSHEEAAKVCRRMPALFGYSVEENLRPKYEYLVNEMERDVEELKEFPQYFAF 240

Query: 241 SLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           SLERRIAPRHLHLKQRN+RIPL+RMLLWSD +FYTKWK
Sbjct: 241 SLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK 278

[Close]

BLAST of MC04g0498 vs. NCBI nr
Match: KAG6588628.1 (Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 423 bits (1087), Expect = 4.74e-147
Identity = 213/278 (76.62%), Postives = 236/278 (84.89%), Query Frame = 0


Query: 1   MAVGALSRPFAAISSFSHSTT-RRRGPRRLPSSFINFRTAHHQNLRYLKSLGILDPPARK 60
           MA GALSRPF  ISS SHS T   R P   P  F+NFRTAH+ NLRYLKSL +LD  + K
Sbjct: 1   MAAGALSRPFTTISSLSHSNTPTSRPPPPPPPPFLNFRTAHYHNLRYLKSLHLLDSRSTK 60

Query: 61  FQSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSA 120
           F+SPDAV  IL TV FLKSKGFSD DF  LA  CP LFSPDF+PT+IAPVFDFLAADLSA
Sbjct: 61  FRSPDAVHSILTTVHFLKSKGFSDSDFPTLAFLCPQLFSPDFEPTDIAPVFDFLAADLSA 120

Query: 121 SVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKLRSK 180
           S+QESRG+ILRCP++L SD ELCL PTLRFLKQ+GI NLN+PSNL SHLLNTRVEKLR K
Sbjct: 121 SIQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGK 180

Query: 181 FRFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAF 240
           FRFLQ++G +HEEAA+VC RMPAIFGYSVEENL+PK EYL+ EMER+VEELK FP YFAF
Sbjct: 181 FRFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAF 240

Query: 241 SLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           SLERRIAPRHLHLKQRN+RIPL+RMLLWSD +FYTKWK
Sbjct: 241 SLERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK 278

[Close]

BLAST of MC04g0498 vs. NCBI nr
Match: XP_022988882.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 422 bits (1085), Expect = 1.06e-146
Identity = 215/281 (76.51%), Postives = 238/281 (84.70%), Query Frame = 0


Query: 1   MAVGALSRPFAAISSFSHST--TRRRGPRRLPSS--FINFRTAHHQNLRYLKSLGILDPP 60
           MAVGALS PF  ISS SHS   T R  P   PS   F+NFRTAH  NLRYLKSL +LD  
Sbjct: 1   MAVGALSHPFTTISSLSHSNSPTSRPPPSPPPSPPPFLNFRTAHSHNLRYLKSLRLLDSH 60

Query: 61  ARKFQSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAAD 120
           + KF+SPDAV  ILATV FLKSKGFSD DF  LA  CP LFSPDFDPT+IAPVFDFLAAD
Sbjct: 61  STKFRSPDAVHSILATVHFLKSKGFSDSDFPTLAFLCPQLFSPDFDPTDIAPVFDFLAAD 120

Query: 121 LSASVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKL 180
           LSAS+QESRG+ILRCP++L SD ELCL PTLRFLKQ+G+ NLN+PSNL SHLLNTRVEKL
Sbjct: 121 LSASIQESRGMILRCPKLLFSDVELCLRPTLRFLKQIGLENLNTPSNLKSHLLNTRVEKL 180

Query: 181 RSKFRFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQY 240
           R KFRFLQ++G +HEEAA+VC RMPA+FGYSVEENL+PK EYL+ EMER++EELK FPQY
Sbjct: 181 RGKFRFLQELGFSHEEAAKVCRRMPALFGYSVEENLRPKYEYLVNEMERDLEELKEFPQY 240

Query: 241 FAFSLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           FAFSLERRIAPRHLHLKQRN+RIPLNRMLLWSD +FYTKWK
Sbjct: 241 FAFSLERRIAPRHLHLKQRNLRIPLNRMLLWSDQKFYTKWK 281

[Close]

BLAST of MC04g0498 vs. ExPASy TrEMBL
Match: A0A6J1EZY9 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111437777 PE=3 SV=1)

HSP 1 Score: 427 bits (1099), Expect = 2.96e-149
Identity = 215/277 (77.62%), Postives = 237/277 (85.56%), Query Frame = 0


Query: 1   MAVGALSRPFAAISSFSHSTTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGILDPPARKF 60
           MAVGALSRPF  ISS SHS T    P   P  F+NFRTAH+ NLRYLKSL +LD  + KF
Sbjct: 1   MAVGALSRPFTTISSLSHSNTPTSRP---PPPFLNFRTAHYHNLRYLKSLHLLDSRSTKF 60

Query: 61  QSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSAS 120
           +SPDAV  ILATV FLKSKGFSD DF  LA  CP LFSPDFDPT+IAPVFDFLAADLSAS
Sbjct: 61  RSPDAVHSILATVHFLKSKGFSDSDFPSLAILCPQLFSPDFDPTDIAPVFDFLAADLSAS 120

Query: 121 VQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKLRSKF 180
           +QESRG+ILRCP++L SD ELCL PTLRFLKQ+GI NLN+PSNL SHLLNTRVEKLR KF
Sbjct: 121 IQESRGMILRCPRLLFSDVELCLRPTLRFLKQIGIENLNTPSNLKSHLLNTRVEKLRGKF 180

Query: 181 RFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFS 240
           RFLQ++G +HEEAA+VC RMPAIFGYSVEENL+PK EYL+ EMER+VEELK FP YFAFS
Sbjct: 181 RFLQELGFSHEEAAKVCRRMPAIFGYSVEENLRPKYEYLVNEMERDVEELKEFPHYFAFS 240

Query: 241 LERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           LERRIAPRHLHLKQRN+RIPL+RMLLWSD +FYTKWK
Sbjct: 241 LERRIAPRHLHLKQRNLRIPLHRMLLWSDQKFYTKWK 274

[Close]

BLAST of MC04g0498 vs. ExPASy TrEMBL
Match: A0A6J1JEA2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486102 PE=3 SV=1)

HSP 1 Score: 422 bits (1085), Expect = 5.15e-147
Identity = 215/281 (76.51%), Postives = 238/281 (84.70%), Query Frame = 0


Query: 1   MAVGALSRPFAAISSFSHST--TRRRGPRRLPSS--FINFRTAHHQNLRYLKSLGILDPP 60
           MAVGALS PF  ISS SHS   T R  P   PS   F+NFRTAH  NLRYLKSL +LD  
Sbjct: 1   MAVGALSHPFTTISSLSHSNSPTSRPPPSPPPSPPPFLNFRTAHSHNLRYLKSLRLLDSH 60

Query: 61  ARKFQSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAAD 120
           + KF+SPDAV  ILATV FLKSKGFSD DF  LA  CP LFSPDFDPT+IAPVFDFLAAD
Sbjct: 61  STKFRSPDAVHSILATVHFLKSKGFSDSDFPTLAFLCPQLFSPDFDPTDIAPVFDFLAAD 120

Query: 121 LSASVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKL 180
           LSAS+QESRG+ILRCP++L SD ELCL PTLRFLKQ+G+ NLN+PSNL SHLLNTRVEKL
Sbjct: 121 LSASIQESRGMILRCPKLLFSDVELCLRPTLRFLKQIGLENLNTPSNLKSHLLNTRVEKL 180

Query: 181 RSKFRFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQY 240
           R KFRFLQ++G +HEEAA+VC RMPA+FGYSVEENL+PK EYL+ EMER++EELK FPQY
Sbjct: 181 RGKFRFLQELGFSHEEAAKVCRRMPALFGYSVEENLRPKYEYLVNEMERDLEELKEFPQY 240

Query: 241 FAFSLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           FAFSLERRIAPRHLHLKQRN+RIPLNRMLLWSD +FYTKWK
Sbjct: 241 FAFSLERRIAPRHLHLKQRNLRIPLNRMLLWSDQKFYTKWK 281

[Close]

BLAST of MC04g0498 vs. ExPASy TrEMBL
Match: A0A5D3C479 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00020 PE=3 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 4.17e-137
Identity = 210/284 (73.94%), Postives = 233/284 (82.04%), Query Frame = 0


Query: 1   MAVGA--LSRPFAAISSFSH-----STTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGIL 60
           MAVGA  LS  F  +SSFSH      TTR R P   P S INFRT+H QNLRYLKSL I+
Sbjct: 1   MAVGAPVLSHSFPIVSSFSHFTTPTPTTRSRHPHLHPPS-INFRTSHQQNLRYLKSLNII 60

Query: 61  DPPARKFQSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFL 120
           DP  R F+SPDAVDQIL TV FLKSKGFSD DF RLA  CPNLF+ +FD T+IAPVF FL
Sbjct: 61  DPQTR-FRSPDAVDQILTTVHFLKSKGFSDSDFPRLAFFCPNLFTSNFDTTDIAPVFHFL 120

Query: 121 AADLSASVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRV 180
           AAD+SAS+QESRGLILRCP+IL SD ELCL PT RFLKQLGI NL SPSNLNSHLLNTRV
Sbjct: 121 AADISASIQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRV 180

Query: 181 EKLRSKFRFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGF 240
           EKLR+K RFLQ+IG ++EEA++VC RMPAIFGYSV+ENL+PK EYL+K MER++EELKGF
Sbjct: 181 EKLRNKIRFLQEIGFSYEEASKVCGRMPAIFGYSVKENLRPKYEYLVKVMERDLEELKGF 240

Query: 241 PQYFAFSLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           PQYF FSLE RI PRHLHLKQR + IPLN MLLWS NRFY+KWK
Sbjct: 241 PQYFGFSLEGRIMPRHLHLKQRGLHIPLNSMLLWSHNRFYSKWK 282

[Close]

BLAST of MC04g0498 vs. ExPASy TrEMBL
Match: A0A1S3BZK0 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495186 PE=3 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 4.17e-137
Identity = 210/284 (73.94%), Postives = 233/284 (82.04%), Query Frame = 0


Query: 1   MAVGA--LSRPFAAISSFSH-----STTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGIL 60
           MAVGA  LS  F  +SSFSH      TTR R P   P S INFRT+H QNLRYLKSL I+
Sbjct: 1   MAVGAPVLSHSFPIVSSFSHFTTPTPTTRSRHPHLHPPS-INFRTSHQQNLRYLKSLNII 60

Query: 61  DPPARKFQSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFL 120
           DP  R F+SPDAVDQIL TV FLKSKGFSD DF RLA  CPNLF+ +FD T+IAPVF FL
Sbjct: 61  DPQTR-FRSPDAVDQILTTVHFLKSKGFSDSDFPRLAFFCPNLFTSNFDTTDIAPVFHFL 120

Query: 121 AADLSASVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRV 180
           AAD+SAS+QESRGLILRCP+IL SD ELCL PT RFLKQLGI NL SPSNLNSHLLNTRV
Sbjct: 121 AADISASIQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRV 180

Query: 181 EKLRSKFRFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGF 240
           EKLR+K RFLQ+IG ++EEA++VC RMPAIFGYSV+ENL+PK EYL+K MER++EELKGF
Sbjct: 181 EKLRNKIRFLQEIGFSYEEASKVCGRMPAIFGYSVKENLRPKYEYLVKVMERDLEELKGF 240

Query: 241 PQYFAFSLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           PQYF FSLE RI PRHLHLKQR + IPLN MLLWS NRFY+KWK
Sbjct: 241 PQYFGFSLEGRIMPRHLHLKQRGLHIPLNSMLLWSHNRFYSKWK 282

[Close]

BLAST of MC04g0498 vs. ExPASy TrEMBL
Match: A0A0A0K870 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075660 PE=3 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 9.77e-136
Identity = 206/284 (72.54%), Postives = 229/284 (80.63%), Query Frame = 0


Query: 1   MAVG--ALSRPFAAISSFSH-----STTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGIL 60
           MAVG   LS  F A+ SFSH      TTR R P   P S INFRT+HHQN+RYLKSL ++
Sbjct: 1   MAVGPPVLSHSFLALYSFSHFTTPTPTTRSRHPHLHPPS-INFRTSHHQNIRYLKSLNVI 60

Query: 61  DPPARKFQSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFL 120
           DP  R F SPDAV QIL TV FLKSKGFSD DF RLA  CPNLF+ +FD T+IAPVF FL
Sbjct: 61  DPQTR-FHSPDAVHQILTTVHFLKSKGFSDSDFPRLAFLCPNLFTSNFDTTDIAPVFQFL 120

Query: 121 AADLSASVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRV 180
           A D+SAS+QESRGLILRCP+IL SD ELCL PT RFLKQLGI NL SPSNLNSHLLNTRV
Sbjct: 121 ATDISASLQESRGLILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRV 180

Query: 181 EKLRSKFRFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGF 240
           EKLRSK RF Q+IG +HEEA++VC RMPA+FGYSV+ENL+PK EY +KEMER++EELKGF
Sbjct: 181 EKLRSKIRFFQEIGFSHEEASKVCGRMPAMFGYSVKENLKPKYEYFVKEMERDLEELKGF 240

Query: 241 PQYFAFSLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 277
           PQYF FSLE RI PRHLHLKQR + IPLN MLLWS NRFY+KWK
Sbjct: 241 PQYFGFSLEGRIMPRHLHLKQRGLHIPLNSMLLWSHNRFYSKWK 282

[Close]

BLAST of MC04g0498 vs. TAIR 10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 313.9 bits (803), Expect = 1.3e-85
Identity = 159/277 (57.40%), Postives = 200/277 (72.20%), Query Frame = 0


Query: 1   MAVGALSRPFAAISSFSHSTTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGILDPPARKF 60
           MAV A       +SSFS   +    P      ++ F+T+H +NLR+L SLGI+    R  
Sbjct: 1   MAVIASLHHLQPLSSFSSPPS----PSSSKPLYLKFQTSHRENLRHLSSLGIVPQNPRLA 60

Query: 61  QSPDAVDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSAS 120
              + +  IL+ V+ LKSKG SD DF RL   CP LFSP FD +++ PVFDFL  +L AS
Sbjct: 61  PPANDLSVILSAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGAS 120

Query: 121 VQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVEKLRSKF 180
            +ESRGLI+ CP IL SD E CL PTL +LK+LG+RNLN  S  N+H+LNTRVEKLR+K 
Sbjct: 121 AEESRGLIVNCPNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVEKLRAKM 180

Query: 181 RFLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFS 240
           RFL+ IG  HEEAARVC R+PAIFGYSVE+NL+PK E+L+ +MERE+EELK FPQYFAFS
Sbjct: 181 RFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFS 240

Query: 241 LERRIAPRHLHLKQRNVRIPLNRMLLWSDNRFYTKWK 278
           L +RI PRH HLK++NVR+ L+RML+W D +FY+KWK
Sbjct: 241 LGKRIRPRHWHLKKKNVRVSLSRMLMWGDQKFYSKWK 273

[Close]

BLAST of MC04g0498 vs. TAIR 10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.4e-38
Identity = 86/208 (41.35%), Postives = 129/208 (62.02%), Query Frame = 0


Query: 66  VDQILATVDFLKSKGFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSASVQESR 125
           +D I + + FL+SKG   +D  R+   CP + + D   TE+ PVF FL+ DL       R
Sbjct: 84  LDSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSDV-RTELYPVFMFLSNDLHVPENAFR 143

Query: 126 GLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVE-KLRSKFRFLQ 185
            +I +CP++L S  E  L P L +L++LG+++L + +  +  LL + VE  L  K RFL+
Sbjct: 144 RVIKKCPRLLISSVEDQLKPALFYLQRLGLKDLEALAYQDPILLVSSVEHTLIPKLRFLE 203

Query: 186 DIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFSLERR 245
            IG +  EA  +  R PA+F +S+E N +PK++Y M E++ ++E LK FPQYFAFSLE+R
Sbjct: 204 SIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKR 263

Query: 246 IAPRHLHLKQRNVRIPLNRMLLWSDNRF 273
           I PRHL   +R + +PL+ ML  +D  F
Sbjct: 264 IKPRHLESMERGLELPLSLMLKSTDEEF 290

[Close]

BLAST of MC04g0498 vs. TAIR 10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 148.3 bits (373), Expect = 9.2e-36
Identity = 91/237 (38.40%), Postives = 138/237 (58.23%), Query Frame = 0


Query: 42  QNLRYLKSLGILDPPARKFQSPD----AVDQILATVDFLKSKGFSDHDFARLASSCPNLF 101
           + L YL+ L + DP      +P      +  +++    L S G S     R+    P+L 
Sbjct: 34  EKLIYLQDLNV-DPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLL 93

Query: 102 SPDFDPTEIAPVFDFLAADLSASVQESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRN 161
           + D   +EI PV  FL+ ++S S Q+    I RCP++L S  +  L P L FLK LG   
Sbjct: 94  TSD-PESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVG 153

Query: 162 LNSPSNLNSHLLNTRVEK-LRSKFRFLQD-IGLTHEEAARVCARMPAIFGYSVEENLQPK 221
            ++ ++ N+ LL + VE+ L  K  +L++ +G T EE A++  R PA+  YSV+ NL PK
Sbjct: 154 RDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPK 213

Query: 222 IEYLMKEMEREVEELKGFPQYFAFSLERRIAPRHLHLKQRNVRIPLNRMLLWSDNRF 273
           +E+ ++EM  +V+ELK FPQYF+FSLER+I PRH  LK+  + +PL+ ML  SD +F
Sbjct: 214 VEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 268

[Close]

BLAST of MC04g0498 vs. TAIR 10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-28
Identity = 93/271 (34.32%), Postives = 138/271 (50.92%), Query Frame = 0


Query: 13  ISSFSHSTTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGI-------LDPPARKFQSPDA 72
           I S S +TT       L SS        H+ L YL SLGI         PP        A
Sbjct: 53  IPSLSSTTTTTTTTETLESSI-------HEKLIYLDSLGIDFLTLINRHPPLLS----TA 112

Query: 73  VDQILATVDFLKSK--GFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSA-SVQ 132
           +  + + VD++ +    F+  DF RL S CP L +       I PV  FL  ++   S+ 
Sbjct: 113 LSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTI-PVITFLLREVGVDSIF 172

Query: 133 ESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVE-KLRSKFR 192
           + R  + R P++L    +  L PTL FL+++GI +     + +++LL+  V+ KL  +  
Sbjct: 173 DLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILD----PHKHTYLLSCSVDNKLVPRID 232

Query: 193 FLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFSL 252
           + + +G +   A  +  R P +F YS+ EN +PK++YLM EM R+V E+  FPQYF+FSL
Sbjct: 233 YFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSL 292

Query: 253 ERRIAPRHLHLKQRNVRIPLNRMLLWSDNRF 273
           E RI PRH     + VR PL  ML  ++  F
Sbjct: 293 ENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307

[Close]

BLAST of MC04g0498 vs. TAIR 10
Match: AT2G36000.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-28
Identity = 93/271 (34.32%), Postives = 138/271 (50.92%), Query Frame = 0


Query: 13  ISSFSHSTTRRRGPRRLPSSFINFRTAHHQNLRYLKSLGI-------LDPPARKFQSPDA 72
           I S S +TT       L SS        H+ L YL SLGI         PP        A
Sbjct: 53  IPSLSSTTTTTTTTETLESSI-------HEKLIYLDSLGIDFLTLINRHPPLLS----TA 112

Query: 73  VDQILATVDFLKSK--GFSDHDFARLASSCPNLFSPDFDPTEIAPVFDFLAADLSA-SVQ 132
           +  + + VD++ +    F+  DF RL S CP L +       I PV  FL  ++   S+ 
Sbjct: 113 LSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTI-PVITFLLREVGVDSIF 172

Query: 133 ESRGLILRCPQILCSDAELCLLPTLRFLKQLGIRNLNSPSNLNSHLLNTRVE-KLRSKFR 192
           + R  + R P++L    +  L PTL FL+++GI +     + +++LL+  V+ KL  +  
Sbjct: 173 DLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILD----PHKHTYLLSCSVDNKLVPRID 232

Query: 193 FLQDIGLTHEEAARVCARMPAIFGYSVEENLQPKIEYLMKEMEREVEELKGFPQYFAFSL 252
           + + +G +   A  +  R P +F YS+ EN +PK++YLM EM R+V E+  FPQYF+FSL
Sbjct: 233 YFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSL 292

Query: 253 ERRIAPRHLHLKQRNVRIPLNRMLLWSDNRF 273
           E RI PRH     + VR PL  ML  ++  F
Sbjct: 293 ENRIKPRHEACAAKGVRFPLPVMLKTNEAGF 307

The following BLAST results are available for this feature:

BLAST of MC04g0498 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84X53	1.3e-34	38.40	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9FM80	8.7e-15	26.04	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	3.7e-13	26.78	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4JVI3	4.1e-12	26.57	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	7.2e-09	24.65	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]

BLAST of MC04g0498 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931610.1	6.12e-149	77.62	transcription termination factor MTEF1, chloroplastic [Cucurbita moschata]	[more]
KAG7022425.1	2.49e-148	77.26	Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyro...	[more]
XP_023530124.1	1.17e-147	76.98	transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pep...	[more]
KAG6588628.1	4.74e-147	76.62	Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyro...	[more]
XP_022988882.1	1.06e-146	76.51	transcription termination factor MTEF1, chloroplastic [Cucurbita maxima]	[more]

BLAST of MC04g0498 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZY9	2.96e-149	77.62	transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3...	[more]
A0A6J1JEA2	5.15e-147	76.51	transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366...	[more]
A0A5D3C479	4.17e-137	73.94	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BZK0	4.17e-137	73.94	transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0K870	9.77e-136	72.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075660 PE=3 SV=1	[more]

BLAST of MC04g0498 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18870.1	1.3e-85	57.40	Mitochondrial transcription termination factor family protein	[more]
AT2G34620.1	3.4e-38	41.35	Mitochondrial transcription termination factor family protein	[more]
AT2G03050.1	9.2e-36	38.40	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.1	1.1e-28	34.32	Mitochondrial transcription termination factor family protein	[more]
AT2G36000.2	1.1e-28	34.32	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 194..226 e-value: 4.7E-6 score: 36.1 coord: 161..189 e-value: 330.0 score: 7.7 coord: 227..258 e-value: 3.4 score: 16.6 coord: 125..156 e-value: 0.0029 score: 26.8 coord: 87..120 e-value: 340.0 score: 7.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 107..272 e-value: 3.6E-30 score: 105.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 19..277
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 38..277 e-value: 7.7E-46 score: 158.4
None	No IPR available	PANTHER	PTHR13068:SF139	TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC	coord: 19..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0498.1	MC04g0498.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003690	double-stranded DNA binding