MC04g0497 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g0497
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 4172512 .. 4172703 (-)
RNA-Seq ExpressionMC04g0497
SyntenyMC04g0497
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTTTATTTTTAAAAATGCTATAAAGGCAGTTTTTCATAACATTTGGAATGAAAGAAACCAAAGATTATTTCAAGAAAGGGTTTCGGAGTGGGTGGATAGAATGAGTTCGGAAAAAAGACATGTTGCCTTTTGGAGTCTGGCCTCAAGTTGCTTTAGTAATTACTCTCTCGGGGCAACTCCTTCAAGTTGG

mRNA sequence

GATTTTATTTTTAAAAATGCTATAAAGGCAGTTTTTCATAACATTTGGAATGAAAGAAACCAAAGATTATTTCAAGAAAGGGTTTCGGAGTGGGTGGATAGAATGAGTTCGGAAAAAAGACATGTTGCCTTTTGGAGTCTGGCCTCAAGTTGCTTTAGTAATTACTCTCTCGGGGCAACTCCTTCAAGTTGG

Coding sequence (CDS)

GATTTTATTTTTAAAAATGCTATAAAGGCAGTTTTTCATAACATTTGGAATGAAAGAAACCAAAGATTATTTCAAGAAAGGGTTTCGGAGTGGGTGGATAGAATGAGTTCGGAAAAAAGACATGTTGCCTTTTGGAGTCTGGCCTCAAGTTGCTTTAGTAATTACTCTCTCGGGGCAACTCCTTCAAGTTGG

Protein sequence

DFIFKNAIKAVFHNIWNERNQRLFQERVSEWVDRMSSEKRHVAFWSLASSCFSNYSLGATPSSW
Homology
BLAST of MC04g0497 vs. NCBI nr
Match: XP_038903695.1 (uncharacterized protein LOC120090219 [Benincasa hispida])

HSP 1 Score: 48.5 bits (114), Expect = 1.91e-04
Identity = 22/59 (37.29%), Postives = 34/59 (57.63%), Query Frame = 0

Query: 6   NAIKAVFHNIWNERNQRLFQERVSEWVDRMSSEKRHVAFWSLASSCFSNYSLGATPSSW 64
           NA+KA+  ++W ERNQR+F  + +   DR+ + +R  + W L S  F  YSL     +W
Sbjct: 252 NAVKALLADLWFERNQRIFYNKATSCQDRLEAARRQASSWCLLSDPFRAYSLSDFNLNW 310

BLAST of MC04g0497 vs. NCBI nr
Match: TYK28784.1 (GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 47.0 bits (110), Expect = 6.94e-04
Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0

Query: 3   IFKNAIKAVFHNIWNERNQRLFQERVSEWVDRMSSEKRHVAFWSLASSCFSNYSLGATPS 62
           I+ N  KA+  +IW E NQR+F+ +V  W +R+   KR+ A W + +  F +YS+     
Sbjct: 586 IWGNMSKALLSDIWFECNQRIFRGKVMHWSERLDIAKRNAATWCMLNKEFIDYSIQDLSV 645

Query: 63  SW 64
           +W
Sbjct: 646 NW 647

BLAST of MC04g0497 vs. NCBI nr
Match: KAA0062564.1 (GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 47.0 bits (110), Expect = 6.96e-04
Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0

Query: 3   IFKNAIKAVFHNIWNERNQRLFQERVSEWVDRMSSEKRHVAFWSLASSCFSNYSLGATPS 62
           I+ N  KA+  +IW E NQR+F+ +V  W +R+   KR+ A W + +  F +YS+     
Sbjct: 633 IWGNMSKALLSDIWFECNQRIFRGKVMHWSERLDIAKRNAATWCMLNKEFIDYSIQDLSV 692

Query: 63  SW 64
           +W
Sbjct: 693 NW 694

BLAST of MC04g0497 vs. ExPASy TrEMBL
Match: A0A5D3DZ52 (GPI-anchor transamidase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001490 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.36e-04
Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0

Query: 3   IFKNAIKAVFHNIWNERNQRLFQERVSEWVDRMSSEKRHVAFWSLASSCFSNYSLGATPS 62
           I+ N  KA+  +IW E NQR+F+ +V  W +R+   KR+ A W + +  F +YS+     
Sbjct: 586 IWGNMSKALLSDIWFECNQRIFRGKVMHWSERLDIAKRNAATWCMLNKEFIDYSIQDLSV 645

Query: 63  SW 64
           +W
Sbjct: 646 NW 647

BLAST of MC04g0497 vs. ExPASy TrEMBL
Match: A0A5A7V5N8 (GPI-anchor transamidase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00520 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.37e-04
Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0

Query: 3   IFKNAIKAVFHNIWNERNQRLFQERVSEWVDRMSSEKRHVAFWSLASSCFSNYSLGATPS 62
           I+ N  KA+  +IW E NQR+F+ +V  W +R+   KR+ A W + +  F +YS+     
Sbjct: 633 IWGNMSKALLSDIWFECNQRIFRGKVMHWSERLDIAKRNAATWCMLNKEFIDYSIQDLSV 692

Query: 63  SW 64
           +W
Sbjct: 693 NW 694

BLAST of MC04g0497 vs. ExPASy TrEMBL
Match: A0A200PTF6 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1513g8 PE=4 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 9.94e-04
Identity = 17/43 (39.53%), Postives = 25/43 (58.14%), Query Frame = 0

Query: 3  IFKNAIKAVFHNIWNERNQRLFQERVSEWVDRMSSEKRHVAFW 45
          +FK    A+F N+W ERN+R+F+E+   W+  M   K   A W
Sbjct: 33 LFKLFPTAIFWNVWTERNERIFEEKACSWIQVMEKIKLMAATW 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038903695.11.91e-0437.29uncharacterized protein LOC120090219 [Benincasa hispida][more]
TYK28784.16.94e-0435.48GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa][more]
KAA0062564.16.96e-0435.48GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5D3DZ523.36e-0435.48GPI-anchor transamidase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A5A7V5N83.37e-0435.48GPI-anchor transamidase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
A0A200PTF69.94e-0439.53Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1513g8 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g0497.1MC04g0497.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity