Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTACTGGTATGGTAAGAATGTGAAGCCTCAACCAAGCAACCGTGACCTCTACTGGTATGGTAAGGATGCAAAGGCTCAACCAAACACCCGCGACCTCTATTGGTATGGTAAGGATGCAAAGCCTCAACCAAACATCCGTGACCTCTACTGGTATAGTAAAGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAGGATACAAAGGCTCAACCAAGCAGTCGCGGCCTCTACTGGTATGGTAAGGACGATGCAAAGCCTCAACCAAACACCCGCGACCTCTATTGGTATGGTGACGATGTAAAGACCCAACCAAACACTGGCGATCTCTATTGGTATGGTAAGGATACAAAGCCTCAACCAAATGCCCGCGATCTCTATTGGTATGGTAAGGATGCAAAGGCTCAACCAAACACCCGCGACCTCTATTGGTATGGTAAGGATGCAAAGACTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAATATACAAAGGCTCAAGCAAGCAGTCGTGACCTCTATTGGTACGGTAATGATGCAAAGCCTCAACCAAACACTCTCGATCTCTACTGGTATGGTAAGGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTAT
mRNA sequence
CTCTACTGGTATGGTAAGAATGTGAAGCCTCAACCAAGCAACCGTGACCTCTACTGGTATGGTAAGGATGCAAAGGCTCAACCAAACACCCGCGACCTCTATTGGTATGGTAAGGATGCAAAGCCTCAACCAAACATCCGTGACCTCTACTGGTATAGTAAAGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAGGATACAAAGGCTCAACCAAGCAGTCGCGGCCTCTACTGGTATGGTAAGGACGATGCAAAGCCTCAACCAAACACCCGCGACCTCTATTGGTATGGTGACGATGTAAAGACCCAACCAAACACTGGCGATCTCTATTGGTATGGTAAGGATACAAAGCCTCAACCAAATGCCCGCGATCTCTATTGGTATGGTAAGGATGCAAAGGCTCAACCAAACACCCGCGACCTCTATTGGTATGGTAAGGATGCAAAGACTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAATATACAAAGGCTCAAGCAAGCAGTCGTGACCTCTATTGGTACGGTAATGATGCAAAGCCTCAACCAAACACTCTCGATCTCTACTGGTATGGTAAGGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTAT
Coding sequence (CDS)
CTCTACTGGTATGGTAAGAATGTGAAGCCTCAACCAAGCAACCGTGACCTCTACTGGTATGGTAAGGATGCAAAGGCTCAACCAAACACCCGCGACCTCTATTGGTATGGTAAGGATGCAAAGCCTCAACCAAACATCCGTGACCTCTACTGGTATAGTAAAGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAGGATACAAAGGCTCAACCAAGCAGTCGCGGCCTCTACTGGTATGGTAAGGACGATGCAAAGCCTCAACCAAACACCCGCGACCTCTATTGGTATGGTGACGATGTAAAGACCCAACCAAACACTGGCGATCTCTATTGGTATGGTAAGGATACAAAGCCTCAACCAAATGCCCGCGATCTCTATTGGTATGGTAAGGATGCAAAGGCTCAACCAAACACCCGCGACCTCTATTGGTATGGTAAGGATGCAAAGACTCAACAAAACACTCGCGACCTCTATTGGTATGGTAAATATACAAAGGCTCAAGCAAGCAGTCGTGACCTCTATTGGTACGGTAATGATGCAAAGCCTCAACCAAACACTCTCGATCTCTACTGGTATGGTAAGGATGCAAAGCCTCAACAAAACACTCGCGACCTCTATTGGTAT
Protein sequence
LYWYGKNVKPQPSNRDLYWYGKDAKAQPNTRDLYWYGKDAKPQPNIRDLYWYSKDAKPQQNTRDLYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYGKDAKAQPNTRDLYWYGKDAKTQQNTRDLYWYGKYTKAQASSRDLYWYGNDAKPQPNTLDLYWYGKDAKPQQNTRDLYWY
Homology
BLAST of MC04g0480 vs. NCBI nr
Match:
XP_022135997.1 (BURP domain-containing protein BNM2C-like [Momordica charantia])
HSP 1 Score: 193 bits (490), Expect = 9.04e-56
Identity = 84/111 (75.68%), Postives = 89/111 (80.18%), Query Frame = 0
Query: 103 DDVKTQPNTGDLYWYGKDTKPQPNARDLYWYGKDAKAQPNTRDLYWYGKDAKTQQNTRDL 162
+D+K QPNT DLYWYG + K QPN DLYWYG D K QPNTRDLYWYGKDAK Q N R+L
Sbjct: 56 EDIKPQPNTRDLYWYGDNVKSQPNIHDLYWYGDDVKLQPNTRDLYWYGKDAKLQSNARNL 115
Query: 163 YWYGKYTKAQASSRDLYWYGNDAKPQPNTLDLYWYGKDAKPQQNTRDLYWY 213
YWYGK K Q S+RDLYWYG DAKPQPNT DLYWYGKD KPQ N RDLYWY
Sbjct: 116 YWYGKNVKPQPSNRDLYWYGKDAKPQPNTRDLYWYGKDVKPQPNIRDLYWY 166
BLAST of MC04g0480 vs. NCBI nr
Match:
XP_001585398.1 (hypothetical protein SS1G_13637 [Sclerotinia sclerotiorum 1980 UF-70] >APA15020.1 hypothetical protein sscle_14g097900 [Sclerotinia sclerotiorum 1980 UF-70] >EDN98778.1 hypothetical protein SS1G_13637 [Sclerotinia sclerotiorum 1980 UF-70])
HSP 1 Score: 89.4 bits (220), Expect = 2.07e-17
Identity = 71/214 (33.18%), Postives = 88/214 (41.12%), Query Frame = 0
Query: 3 WYGKNVKPQPSNRD-LYWYGKDAKAQPNTRD-LYWYGKDAKPQPNIRD-LYWYSKDAKPQ 62
W K VKP RD + W K K RD + W K KP RD + W K KP
Sbjct: 61 WTEKYVKPAVEARDDVVWTEKYVKPAVEARDDVVWTEKYVKPAVEARDDVVWTEKYVKPA 120
Query: 63 QNTRD-LYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYG 122
RD + W K K +R + + KP RD+ W VK P D+ W
Sbjct: 121 VEARDDVVWTEKYVKPAVEARDDVVWTEKYVKPAVAARDVEWTEKYVK--PEARDVEWTE 180
Query: 123 KDTKPQPNARDLYWYGKDAKAQPNTRDLYWYGKDAKTQQNTRDLYWYGKYTKAQASSRDL 182
K KP ARD+ W K K RD+ W K K RD+ W KY K +RD+
Sbjct: 181 KYVKPAVEARDVEWTEKYVKPAVEARDVEWTEKYVKPAVEARDVEWTEKYVKPAVEARDV 240
Query: 183 YWYGNDAKPQPNTLDLYWYGKDAKPQQNTRDLYW 212
W KP D+ W K KP+ RD+ W
Sbjct: 241 EWTEKYVKPAVEARDVEWTEKYVKPE--ARDVEW 270
BLAST of MC04g0480 vs. NCBI nr
Match:
CAD6447312.1 (ad24d203-13b3-4b3f-a0de-3881ebd8f28c [Sclerotinia trifoliorum])
HSP 1 Score: 68.9 bits (167), Expect = 5.75e-10
Identity = 53/190 (27.89%), Postives = 96/190 (50.53%), Query Frame = 0
Query: 25 KAQPNTRDLYWYGKDAKPQPNIRDLYWYSKDAKPQQNTRD--LYWYGKDTKAQPSSRGLY 84
KA+ LY YG++ + + LY Y ++ + + T LY YG++ + + + LY
Sbjct: 42 KAETPAPLLYGYGQEKREETPAPLLYGYGQEKREESTTPAPLLYGYGQEKREETPAPLLY 101
Query: 85 WYGKDD-AKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYGKDAKAQP 144
YG++ A+ T LY YG + + + LY YG++ + + A LY YG++ + +
Sbjct: 102 GYGQEKRAEAVVPTPLLYGYGQEKREETPAPLLYGYGQEKREETPAPLLYGYGQEKREET 161
Query: 145 NTRDLYWYGKDAKTQQNTRDLYWYGKYTKAQASSRD--LYWYGNDAKPQPNTLD--LYWY 204
LY YG++ + + LY YG+ +A+A + LY YG + + + T LY Y
Sbjct: 162 PAPLLYGYGQEKREETPAPLLYGYGQEKRAEAETPAPLLYGYGQEKRAEAETPAPLLYGY 221
Query: 205 GKDAKPQQNT 207
G++ + + T
Sbjct: 222 GQEKRTEAET 231
BLAST of MC04g0480 vs. NCBI nr
Match:
MBR5888389.1 (SEL1-like repeat protein [Akkermansia sp.])
HSP 1 Score: 53.5 bits (127), Expect = 2.65e-04
Identity = 57/193 (29.53%), Postives = 80/193 (41.45%), Query Frame = 0
Query: 24 AKAQPNTRDLYWYGKDAKPQPNIRDLYWYSKDAKP-----QQNTRDLYWYGKDTKAQPSS 83
A AQ N D Y+YG + Q + + W+ K A Q N D Y+YG Q +
Sbjct: 229 APAQCNLGDCYYYGHGVQ-QDYTQAVVWFQKAANQGNSYAQYNLGDCYYYGHGVMLQDYT 288
Query: 84 RGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYGKDTKPQPNARDLYWYGK--- 143
+ WY K A Q + R Q + G Y YG + Q + + WY K
Sbjct: 289 IAVEWYKK--AAEQGHAR----------AQNDLGVCYEYGLGVQ-QDYTKAVEWYKKAAN 348
Query: 144 --DAKAQPNTRDLYWYGKDAKTQQNTRDLYWYGK-----YTKAQASSRDLYWYGNDAKPQ 201
A+AQ N D Y+YG Q T+ + WY K + +AQ + Y G+ + Q
Sbjct: 349 QGHARAQCNLGDCYYYGHGVVQQDYTKAVEWYKKAAEQGHARAQFNLGHCYKNGHGVQ-Q 406
BLAST of MC04g0480 vs. ExPASy TrEMBL
Match:
A0A6J1C4C0 (BURP domain-containing protein BNM2C-like OS=Momordica charantia OX=3673 GN=LOC111007806 PE=4 SV=1)
HSP 1 Score: 193 bits (490), Expect = 4.38e-56
Identity = 84/111 (75.68%), Postives = 89/111 (80.18%), Query Frame = 0
Query: 103 DDVKTQPNTGDLYWYGKDTKPQPNARDLYWYGKDAKAQPNTRDLYWYGKDAKTQQNTRDL 162
+D+K QPNT DLYWYG + K QPN DLYWYG D K QPNTRDLYWYGKDAK Q N R+L
Sbjct: 56 EDIKPQPNTRDLYWYGDNVKSQPNIHDLYWYGDDVKLQPNTRDLYWYGKDAKLQSNARNL 115
Query: 163 YWYGKYTKAQASSRDLYWYGNDAKPQPNTLDLYWYGKDAKPQQNTRDLYWY 213
YWYGK K Q S+RDLYWYG DAKPQPNT DLYWYGKD KPQ N RDLYWY
Sbjct: 116 YWYGKNVKPQPSNRDLYWYGKDAKPQPNTRDLYWYGKDVKPQPNIRDLYWY 166
BLAST of MC04g0480 vs. ExPASy TrEMBL
Match:
A0A1D9QJB2 (Uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=sscle_14g097900 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.00e-17
Identity = 71/214 (33.18%), Postives = 88/214 (41.12%), Query Frame = 0
Query: 3 WYGKNVKPQPSNRD-LYWYGKDAKAQPNTRD-LYWYGKDAKPQPNIRD-LYWYSKDAKPQ 62
W K VKP RD + W K K RD + W K KP RD + W K KP
Sbjct: 61 WTEKYVKPAVEARDDVVWTEKYVKPAVEARDDVVWTEKYVKPAVEARDDVVWTEKYVKPA 120
Query: 63 QNTRD-LYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYG 122
RD + W K K +R + + KP RD+ W VK P D+ W
Sbjct: 121 VEARDDVVWTEKYVKPAVEARDDVVWTEKYVKPAVAARDVEWTEKYVK--PEARDVEWTE 180
Query: 123 KDTKPQPNARDLYWYGKDAKAQPNTRDLYWYGKDAKTQQNTRDLYWYGKYTKAQASSRDL 182
K KP ARD+ W K K RD+ W K K RD+ W KY K +RD+
Sbjct: 181 KYVKPAVEARDVEWTEKYVKPAVEARDVEWTEKYVKPAVEARDVEWTEKYVKPAVEARDV 240
Query: 183 YWYGNDAKPQPNTLDLYWYGKDAKPQQNTRDLYW 212
W KP D+ W K KP+ RD+ W
Sbjct: 241 EWTEKYVKPAVEARDVEWTEKYVKPE--ARDVEW 270
BLAST of MC04g0480 vs. ExPASy TrEMBL
Match:
A7F7Q7 (Uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=SS1G_13637 PE=4 SV=1)
HSP 1 Score: 89.4 bits (220), Expect = 1.00e-17
Identity = 71/214 (33.18%), Postives = 88/214 (41.12%), Query Frame = 0
Query: 3 WYGKNVKPQPSNRD-LYWYGKDAKAQPNTRD-LYWYGKDAKPQPNIRD-LYWYSKDAKPQ 62
W K VKP RD + W K K RD + W K KP RD + W K KP
Sbjct: 61 WTEKYVKPAVEARDDVVWTEKYVKPAVEARDDVVWTEKYVKPAVEARDDVVWTEKYVKPA 120
Query: 63 QNTRD-LYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNTGDLYWYG 122
RD + W K K +R + + KP RD+ W VK P D+ W
Sbjct: 121 VEARDDVVWTEKYVKPAVEARDDVVWTEKYVKPAVAARDVEWTEKYVK--PEARDVEWTE 180
Query: 123 KDTKPQPNARDLYWYGKDAKAQPNTRDLYWYGKDAKTQQNTRDLYWYGKYTKAQASSRDL 182
K KP ARD+ W K K RD+ W K K RD+ W KY K +RD+
Sbjct: 181 KYVKPAVEARDVEWTEKYVKPAVEARDVEWTEKYVKPAVEARDVEWTEKYVKPAVEARDV 240
Query: 183 YWYGNDAKPQPNTLDLYWYGKDAKPQQNTRDLYW 212
W KP D+ W K KP+ RD+ W
Sbjct: 241 EWTEKYVKPAVEARDVEWTEKYVKPE--ARDVEW 270
BLAST of MC04g0480 vs. ExPASy TrEMBL
Match:
A0A080KFV7 (TPR repeat, SEL1 subfamily protein OS=Gilliamella apicola SCGC AB-598-I20 OX=1445514 GN=GASC598I20_005730 PE=4 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 7.49e-13
Identity = 70/221 (31.67%), Postives = 97/221 (43.89%), Query Frame = 0
Query: 2 YWYGKNVKPQPSNRDLYWYGKDAK-----AQPNTRDLYWYGKDAKPQPNIRDLYWYSKDA 61
Y++G V+ Q + YW+ K A+ AQ N +Y G+D K Q + YWY+K A
Sbjct: 201 YYFGDGVE-QDKQKAFYWFTKAAEQGLAIAQYNVGFMYGEGEDIK-QDKQKAFYWYTKAA 260
Query: 62 KP-----QQNTRDLYWYGKDTKAQPSSRGLYWYGKDDAKPQPNTRDLYWYGDDVKTQPNT 121
+ Q N ++ G + Q + YWY K N + + N
Sbjct: 261 EQGQSGAQNNLAYMFDNGNGIE-QDKQKAFYWY----TKAAENGSSI--------AKKNL 320
Query: 122 GDLYWYGKDTKPQPNARDLYWYGK-----DAKAQPNTRDLYWYGKDAKTQQNTRDLYWYG 181
GD Y+YG+D K Q + YWY K D AQ N D Y+YG+D K Q + LYWY
Sbjct: 321 GDKYYYGEDVK-QDKKKAFYWYTKAAEQGDVNAQFNLADKYYYGEDVK-QDKQKALYWYT 380
Query: 182 KYTK-----AQASSRDLYWYGNDAKPQPNTLDLYWYGKDAK 202
K + AQ +Y G D K +YWY K A+
Sbjct: 381 KAAEQDNANAQYHLALMYNKGKDIKKDKQKA-IYWYTKSAE 403
BLAST of MC04g0480 vs. ExPASy TrEMBL
Match:
A0A080K6C6 (Sel1 repeat protein OS=Gilliamella apicola SCGC AB-598-I20 OX=1445514 GN=GASC598I20_001900 PE=4 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 1.11e-09
Identity = 45/126 (35.71%), Postives = 61/126 (48.41%), Query Frame = 0
Query: 11 QPSNRDLYWYGKDAK-----AQPNTRDLYWYGKDAKPQPNIRDLYWYSK-----DAKPQQ 70
Q + YWY K A+ A+ N D Y+YG+D K Q + YWY+K D Q
Sbjct: 10 QDKQKAFYWYTKAAENGSSIAKKNLGDKYYYGEDVK-QDKKKAFYWYTKAAEQGDVNAQF 69
Query: 71 NTRDLYWYGKDTKAQPSSRGLYWYGK----DDAKPQPNTRDLYWYGDDVKTQPNTGDLYW 122
N D Y+YG+D K Q + LYWY K D+A Q + +Y G D+K +YW
Sbjct: 70 NLADKYYYGEDVK-QDKQKALYWYTKAAEQDNANAQYHLALMYNKGKDIKKDKQKA-IYW 129
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022135997.1 | 9.04e-56 | 75.68 | BURP domain-containing protein BNM2C-like [Momordica charantia] | [more] |
XP_001585398.1 | 2.07e-17 | 33.18 | hypothetical protein SS1G_13637 [Sclerotinia sclerotiorum 1980 UF-70] >APA15020.... | [more] |
CAD6447312.1 | 5.75e-10 | 27.89 | ad24d203-13b3-4b3f-a0de-3881ebd8f28c [Sclerotinia trifoliorum] | [more] |
MBR5888389.1 | 2.65e-04 | 29.53 | SEL1-like repeat protein [Akkermansia sp.] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1C4C0 | 4.38e-56 | 75.68 | BURP domain-containing protein BNM2C-like OS=Momordica charantia OX=3673 GN=LOC1... | [more] |
A0A1D9QJB2 | 1.00e-17 | 33.18 | Uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / ... | [more] |
A7F7Q7 | 1.00e-17 | 33.18 | Uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / ... | [more] |
A0A080KFV7 | 7.49e-13 | 31.67 | TPR repeat, SEL1 subfamily protein OS=Gilliamella apicola SCGC AB-598-I20 OX=144... | [more] |
A0A080K6C6 | 1.11e-09 | 35.71 | Sel1 repeat protein OS=Gilliamella apicola SCGC AB-598-I20 OX=1445514 GN=GASC598... | [more] |
Match Name | E-value | Identity | Description | |