MC04g0475 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0475
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	organ-specific protein P4-like
Location	MC04: 3975545 .. 3975847 (-)
RNA-Seq Expression	MC04g0475
Synteny	MC04g0475

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCAAGTACAATAGAGTCGAGACACGAGCCAGGAGATCGTCAATGGAGAAATGTGATGAAAGACGAGTCATTTCCTGAAGCAATTAAAAGCCTTCTTATTCCTTCCGAGAAGGAAATGGATTGTAATGAAACTTTGAAGCCTGAAGATCATGAAAAGCTTTTCGCTAAGGATATCGAGCCTCGACCACAAATCTCATTTTATCCAAACGACATCAAAACGAAAGAGTCTGGCAGTGGCACCAATGAGAAGCCATTTGCTGAAGATTTTGAGCCAAGACCTAATATCTCTATCTACAACAAC

mRNA sequence

TTTGCAAGTACAATAGAGTCGAGACACGAGCCAGGAGATCGTCAATGGAGAAATGTGATGAAAGACGAGTCATTTCCTGAAGCAATTAAAAGCCTTCTTATTCCTTCCGAGAAGGAAATGGATTGTAATGAAACTTTGAAGCCTGAAGATCATGAAAAGCTTTTCGCTAAGGATATCGAGCCTCGACCACAAATCTCATTTTATCCAAACGACATCAAAACGAAAGAGTCTGGCAGTGGCACCAATGAGAAGCCATTTGCTGAAGATTTTGAGCCAAGACCTAATATCTCTATCTACAACAAC

Coding sequence (CDS)

TTTGCAAGTACAATAGAGTCGAGACACGAGCCAGGAGATCGTCAATGGAGAAATGTGATGAAAGACGAGTCATTTCCTGAAGCAATTAAAAGCCTTCTTATTCCTTCCGAGAAGGAAATGGATTGTAATGAAACTTTGAAGCCTGAAGATCATGAAAAGCTTTTCGCTAAGGATATCGAGCCTCGACCACAAATCTCATTTTATCCAAACGACATCAAAACGAAAGAGTCTGGCAGTGGCACCAATGAGAAGCCATTTGCTGAAGATTTTGAGCCAAGACCTAATATCTCTATCTACAACAAC

Protein sequence

FASTIESRHEPGDRQWRNVMKDESFPEAIKSLLIPSEKEMDCNETLKPEDHEKLFAKDIEPRPQISFYPNDIKTKESGSGTNEKPFAEDFEPRPNISIYNN

Homology

[Close]

BLAST of MC04g0475 vs. ExPASy Swiss-Prot
Match: P17772 (Organ-specific protein S2 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.7e-05
Identity = 36/103 (34.95%), Postives = 49/103 (47.57%), Query Frame = 0


Query: 3   STIESRHEPGDRQWRNVMKDESFPEAIKSLLIPSEKEMDCNETLKPEDHEKL---FAKDI 62
           + +ESR + G+  W+ VMKD+  PE I+ LL       D +     + H K       + 
Sbjct: 19  ANVESRKDVGE-YWKLVMKDQDMPEEIQGLL-------DASNIKNSKTHAKENMGAIGEF 78

Query: 63  EPRPQISFY-PNDIKTKESGSGTNEKPFAEDFEPRPNISIYNN 102
           EPRP  S Y  N+I  KE+     E      FEPRPN S Y +
Sbjct: 79  EPRPYASAYGDNEIHAKENMGAIGE------FEPRPNASAYGD 107

[Close]

BLAST of MC04g0475 vs. ExPASy Swiss-Prot
Match: P17771 (Organ-specific protein P4 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-04
Identity = 36/115 (31.30%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 3   STIESRHEPGDRQWRNVMKDESFPEAIKSLLIPSEKEMDCNETLKPEDHEKLFAKDIEPR 62
           + +ESR + G+  W+ VMKD+  PE I+ LL  S  +   N     ++++     + EP 
Sbjct: 20  ANVESRKDVGE-YWKLVMKDQDMPEEIQGLLDASNIK---NSKTHAKENKGAIG-EFEPC 79

Query: 63  PQISFYPN-------------DIKTKESGS--GTNE--KPFAEDFEPRPNISIYN 101
           P  S Y +             + +T+ +GS  G NE    F +DFEPRP+++ YN
Sbjct: 80  PNASAYGDNEIHANENKGAIGEFETRPNGSAYGDNEIGAEFTDDFEPRPSMTKYN 129

[Close]

BLAST of MC04g0475 vs. NCBI nr
Match: XP_022136081.1 (organ-specific protein P4-like [Momordica charantia])

HSP 1 Score: 181 bits (459), Expect = 7.19e-57
Identity = 90/102 (88.24%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLL-IPSEKEMDCNETLKPEDHEKLFAKDI 60
           FASTIESRHEPGDRQWRNV++DES PEAIKSLL I SEKEMDCNETLKP+D EK F KDI
Sbjct: 15  FASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNETLKPKD-EKPFVKDI 74

Query: 61  EPRPQISFYPNDIKTKESGSGTNEKPFAEDFEPRPNISIYNN 101
           EPRPQ SFYPNDIKTKESGS TNEKPFAEDFEPRPN+SIYNN
Sbjct: 75  EPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN 115

[Close]

BLAST of MC04g0475 vs. NCBI nr
Match: XP_022136084.1 (uncharacterized protein LOC111007863 [Momordica charantia])

HSP 1 Score: 154 bits (389), Expect = 3.17e-46
Identity = 79/101 (78.22%), Postives = 85/101 (84.16%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLLIPSEKEMDCNETLKPEDHEKLFAKDIE 60
           FAS IESR EPGD+Q RN++KDE+  EAIK LL  SEK MDCNETLKPED EKLF KDIE
Sbjct: 16  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNMDCNETLKPED-EKLFVKDIE 75

Query: 61  PRPQISFYPNDIKTKESGSGTNEKPFAEDFEPRPNISIYNN 101
           PRPQ +FYPNDIKTKESG   NEKPFAEDFEPR N+SIYNN
Sbjct: 76  PRPQATFYPNDIKTKESGR--NEKPFAEDFEPRSNLSIYNN 113

[Close]

BLAST of MC04g0475 vs. NCBI nr
Match: PON84897.1 (Organ specific protein [Trema orientale])

HSP 1 Score: 99.4 bits (246), Expect = 4.21e-24
Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLLIPS-------EKEMDCNETLKPEDHEK 60
           FAS+IESR +P    WRNVMKDE  PEAI+ L+  S       +++ +C+E+    DH  
Sbjct: 33  FASSIESRKDPAGEYWRNVMKDEPMPEAIQGLISSSSSPSRDSDEKTNCHESKHSHDH-- 92

Query: 61  LFAKDIEPRPQISFYPNDIK---TKESGSGTNE--KPFAEDFEPRPNISIYN 100
           +F ++ EP P +S YP+D     TK++   TN+  KP+AEDFEPRPN+S YN
Sbjct: 93  VFTENFEPTPNVSAYPDDTSAQTTKDNQVATNKENKPYAEDFEPRPNVSAYN 142

[Close]

BLAST of MC04g0475 vs. NCBI nr
Match: PON33933.1 (Organ specific protein [Parasponia andersonii])

HSP 1 Score: 94.7 bits (234), Expect = 1.79e-22
Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLLIPS-------EKEMDCNETLKPEDHEK 60
           FA +IESR  P    W NVMKDE  PEAI+ L+  S       +++ +C+E+    DH  
Sbjct: 17  FAGSIESRKVPAGEYWTNVMKDEPMPEAIQGLISSSSSPSRDSDEKTNCHESKHIHDH-- 76

Query: 61  LFAKDIEPRPQISFYPNDIK---TKESGSGTNE--KPFAEDFEPRPNISIYN 100
           +F K+ EP P +S YP+D     TK++   TN+  KP+AEDFEPRPN+S YN
Sbjct: 77  VFTKNFEPTPNVSAYPDDTSAETTKDNQVATNKENKPYAEDFEPRPNVSAYN 126

[Close]

BLAST of MC04g0475 vs. NCBI nr
Match: XP_022952153.1 (organ-specific protein S2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 89.7 bits (221), Expect = 1.37e-19
Identity = 59/140 (42.14%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLL------IPSEKEM-DCNETLKPEDHE- 60
            A+TIESRHEPGD  WRN + ++   E I+  +      + SEKE  DC ETLK ED + 
Sbjct: 15  LANTIESRHEPGDHHWRNFIDNKLLHEDIEEFIHSDPNSLLSEKETEDCTETLKIEDGKL 74

Query: 61  --------------------KLFAKDIEPRPQISFYPNDIKTK---------ESGS---- 99
                               KLF+KDIEPRP +SFYP+ +KTK          S S    
Sbjct: 75  FVKNLEPRPQATFDSDVVKTKLFSKDIEPRPNLSFYPDVVKTKLFSKDIEPRPSASFYPD 134

[Close]

BLAST of MC04g0475 vs. ExPASy TrEMBL
Match: A0A6J1C2I2 (organ-specific protein P4-like OS=Momordica charantia OX=3673 GN=LOC111007861 PE=4 SV=1)

HSP 1 Score: 181 bits (459), Expect = 3.48e-57
Identity = 90/102 (88.24%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLL-IPSEKEMDCNETLKPEDHEKLFAKDI 60
           FASTIESRHEPGDRQWRNV++DES PEAIKSLL I SEKEMDCNETLKP+D EK F KDI
Sbjct: 15  FASTIESRHEPGDRQWRNVIEDESLPEAIKSLLPIHSEKEMDCNETLKPKD-EKPFVKDI 74

Query: 61  EPRPQISFYPNDIKTKESGSGTNEKPFAEDFEPRPNISIYNN 101
           EPRPQ SFYPNDIKTKESGS TNEKPFAEDFEPRPN+SIYNN
Sbjct: 75  EPRPQASFYPNDIKTKESGSDTNEKPFAEDFEPRPNLSIYNN 115

[Close]

BLAST of MC04g0475 vs. ExPASy TrEMBL
Match: A0A6J1C3A3 (uncharacterized protein LOC111007863 OS=Momordica charantia OX=3673 GN=LOC111007863 PE=4 SV=1)

HSP 1 Score: 154 bits (389), Expect = 1.54e-46
Identity = 79/101 (78.22%), Postives = 85/101 (84.16%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLLIPSEKEMDCNETLKPEDHEKLFAKDIE 60
           FAS IESR EPGD+Q RN++KDE+  EAIK LL  SEK MDCNETLKPED EKLF KDIE
Sbjct: 16  FASRIESRPEPGDQQGRNLIKDEALLEAIKGLLSHSEKNMDCNETLKPED-EKLFVKDIE 75

Query: 61  PRPQISFYPNDIKTKESGSGTNEKPFAEDFEPRPNISIYNN 101
           PRPQ +FYPNDIKTKESG   NEKPFAEDFEPR N+SIYNN
Sbjct: 76  PRPQATFYPNDIKTKESGR--NEKPFAEDFEPRSNLSIYNN 113

[Close]

BLAST of MC04g0475 vs. ExPASy TrEMBL
Match: A0A2P5EH75 (Organ specific protein OS=Trema orientale OX=63057 GN=TorRG33x02_192950 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.04e-24
Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLLIPS-------EKEMDCNETLKPEDHEK 60
           FAS+IESR +P    WRNVMKDE  PEAI+ L+  S       +++ +C+E+    DH  
Sbjct: 33  FASSIESRKDPAGEYWRNVMKDEPMPEAIQGLISSSSSPSRDSDEKTNCHESKHSHDH-- 92

Query: 61  LFAKDIEPRPQISFYPNDIK---TKESGSGTNE--KPFAEDFEPRPNISIYN 100
           +F ++ EP P +S YP+D     TK++   TN+  KP+AEDFEPRPN+S YN
Sbjct: 93  VFTENFEPTPNVSAYPDDTSAQTTKDNQVATNKENKPYAEDFEPRPNVSAYN 142

[Close]

BLAST of MC04g0475 vs. ExPASy TrEMBL
Match: A0A2P5ABL6 (Organ specific protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_348670 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.66e-23
Identity = 51/112 (45.54%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLLIPS-------EKEMDCNETLKPEDHEK 60
           FA +IESR  P    W NVMKDE  PEAI+ L+  S       +++ +C+E+    DH  
Sbjct: 17  FAGSIESRKVPAGEYWTNVMKDEPMPEAIQGLISSSSSPSRDSDEKTNCHESKHIHDH-- 76

Query: 61  LFAKDIEPRPQISFYPNDIK---TKESGSGTNE--KPFAEDFEPRPNISIYN 100
           +F K+ EP P +S YP+D     TK++   TN+  KP+AEDFEPRPN+S YN
Sbjct: 77  VFTKNFEPTPNVSAYPDDTSAETTKDNQVATNKENKPYAEDFEPRPNVSAYN 126

[Close]

BLAST of MC04g0475 vs. ExPASy TrEMBL
Match: A0A6J1GJQ3 (organ-specific protein S2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111454914 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.65e-20
Identity = 59/140 (42.14%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 1   FASTIESRHEPGDRQWRNVMKDESFPEAIKSLL------IPSEKEM-DCNETLKPEDHE- 60
            A+TIESRHEPGD  WRN + ++   E I+  +      + SEKE  DC ETLK ED + 
Sbjct: 15  LANTIESRHEPGDHHWRNFIDNKLLHEDIEEFIHSDPNSLLSEKETEDCTETLKIEDGKL 74

Query: 61  --------------------KLFAKDIEPRPQISFYPNDIKTK---------ESGS---- 99
                               KLF+KDIEPRP +SFYP+ +KTK          S S    
Sbjct: 75  FVKNLEPRPQATFDSDVVKTKLFSKDIEPRPNLSFYPDVVKTKLFSKDIEPRPSASFYPD 134

The following BLAST results are available for this feature:

BLAST of MC04g0475 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P17772	6.7e-05	34.95	Organ-specific protein S2 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P17771	2.5e-04	31.30	Organ-specific protein P4 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of MC04g0475 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136081.1	7.19e-57	88.24	organ-specific protein P4-like [Momordica charantia]	[more]
XP_022136084.1	3.17e-46	78.22	uncharacterized protein LOC111007863 [Momordica charantia]	[more]
PON84897.1	4.21e-24	46.43	Organ specific protein [Trema orientale]	[more]
PON33933.1	1.79e-22	45.54	Organ specific protein [Parasponia andersonii]	[more]
XP_022952153.1	1.37e-19	42.14	organ-specific protein S2-like isoform X3 [Cucurbita moschata]	[more]

BLAST of MC04g0475 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2I2	3.48e-57	88.24	organ-specific protein P4-like OS=Momordica charantia OX=3673 GN=LOC111007861 PE...	[more]
A0A6J1C3A3	1.54e-46	78.22	uncharacterized protein LOC111007863 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A2P5EH75	2.04e-24	46.43	Organ specific protein OS=Trema orientale OX=63057 GN=TorRG33x02_192950 PE=4 SV=...	[more]
A0A2P5ABL6	8.66e-23	45.54	Organ specific protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_348670 PE=...	[more]
A0A6J1GJQ3	6.65e-20	42.14	organ-specific protein S2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of MC04g0475 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024489	Organ specific protein	PFAM	PF10950	Organ_specific	coord: 11..100 e-value: 5.5E-15 score: 56.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..101
None	No IPR available	PANTHER	PTHR33731	PROTEIN, PUTATIVE-RELATED	coord: 1..101
None	No IPR available	PANTHER	PTHR33731:SF2	PROTEIN, PUTATIVE-RELATED	coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0475.1	MC04g0475.1	mRNA