MC04g0443 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAATGGGGTGTTGCGAGAATCGAACTCGCGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACACCCGTTCATGTTACCATTCGAAATATTAGTTTAATATTTTAATTTGACATTATCCGATTTCTCTGTTCTCAAATTTCTCGGTTTCTTTTGCGGCGAAGACGAAGGAAGCAAAATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGGTAACGTTGATTCTTGTAATGTTCTCTTCTCTGCTTCATTGATGTATTGTTTCGTTGTTTGATGCTCTCCGATTAGTCTTTATGGTACAAGAATTAGAGTTTCTTGGTCTAGTCTTCTTAATCCACTTGAAGGGAACAAGTGCATGGGACATCAATTGTCTGTATAAATTTTTATCTCCTGATTCTTATACAACTTGAATAGCAAGAACATTCTGCACCTAAAATGCTTGTGTGTTGTTTGGACAACAATTACCTGTTTCTTGGGCGGGAAATGTTAAAACTATGGTGAGAATGAACAGTTTGACGAATGATGAAATGATATCGTAACATTTGAATTTAAGGAAGTCTTATCTAGTTCAAAGATTCGAATGATACACTTCTCTTCAAATTTCATCCGTGAAGAGAGACTGCATATGGTTAAGCATTTGCATTATGTATGATTCTCTTCCCTGTCTTTTAAATGCACAAAAAACTTCAATAATCTTCATGTACTTGTGTTGTCAACTTGCTCTTCATTCATTTTCTGTATGTTTAAATACGATTTTCTCACAAAAGAGAGAGAAATTTGCAGTTCGTTCATTTTCTGTATGAAAAGTTTAACTAGTTCATAAAGTTTCACTAGTGACATTTCTTCTTGATTGGGTTTTGTTTATGAAGGAATATGTAGCCTCTGGAACTCAATTGTGATTTCTCTATTTGTAATCTTGACTAATGGCTCCAATTTATGCGTACTTTCTGATTTAAATGTCGAATATTGAGAAAGTCCAAACTAGAATAAAAGAAACTGAACCATGGGATACAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGGTATAGGAAATGGATTGGCATTCTTGATATTTTCTTGAAGGAACAAAAAAAAGTGTCAACATTCTATGACAAGGTCACTCTTGAATTTGAATTCTTCCAAACTATGCAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGATTTCAACTAGGATTCACATCTAGCAGGTTTTATGGTGGAGGAAAACAAGATTTTGAATTCCCATCCCATGTAAGTTTTGTCATACCATTCTAAATCTTTGTAGTTTTCATTTAGTTCATTAACTTTGAAATTTTACTCTGTTTCCACTTCACTGGTTTAGAGTTCAAACAAGATTGTATTGTTTGTGTGAGTTAGTAGGAGAAGTTCAAATTACAATTGTCATAGAACATGAGATCAGCCTCTGAAGATGAAGACATTGAATTTGAGTCTAGTTCCATGAATTCATCTTCCATTTGAAAAAGATTATACCCAAAAAAAAAAAAAAAAAAAAAAACTCTGTCTAGGAGAAATTATGATAAATTCTTTTCAGATTGATGATCATGCCATGGTGTCAAAGTGGCTGATATACAAAGAAAAAAAAATAAAATCAGAATGCATGTCTTAGATGTGCCACATCTATATTCGAGTGTGGTGACATGATTTTATTCTGTGTTTGGATTCATTGGTATTCACAGGTGGCATTTAGGGGTAGTTTGGTAACTATGTTGTTTCTTGTTTTTCATTTTTTAAAATATTTTCCAAATTTGCAAATTTCCTATTTTTTTCAACTAAATGTAGTACAGTCAGACAATTGTCCTGTGAAATTAGTCGAGGTTAGCGGATCTGGACACTCGGGATATCAAAAAGAAAAAAAGGCCCATAGTTCGGAGAAAGTGAATGCAGTTTTGGGATGGGGTAACCATACAATTTTAAATAGACAATTTCAAAAAATGGTCAAAAGACCCTCAGACGAACGACCCACTAAAAAATAGGAAGATATCTTCTCACTTTTTAAGTACCAAATTACTCCTCTCTAACTAAGTGTTATTTTTATTTTTCTTTCTTTCCTTTTTTATAGGATAATCCTAACCATATTTTCTCCAACCCTATTTATAGGATAATAAAAAATACAATGTATTTTTGTGTTGATACAAAATAAACAGATAGGATGTGTTTTTGTATGTAGCTCTAGATTACCAATCAAAAGGAAGAAATTCAAAGAATATACCTCTTCAGCCTAACACTACAATAGAAATTTCTATGCATTATTCATCGTATGAATTCGTGGTAAGAGAAAAATATAGAAGATAGAAGTATAACTTTTTAAACACAAATTAATAATACAAAAAGAATTTATAGTAGGTGTCTATATTTGTTATATTTGTTACTTTTTTTTAAATGACCAAATAGTTCTTATTAATAAAAATGTCAATCTGTATTTTTTCAACTATTTCATTAGGGTTGATTTTGACCTTTTGATTTTACTATTTTTATTATTATATTTAAAATAAAATATTAATATTTCTCCTAAATTCAATTTTTTTTTGTTATTTTTTTACTATATTATCTCAATATATGTACATATATAAACCGACCTCACGAGATACATTCATGGCGGCTAGTGGCAGAGGTTGAGAGAGAGGCCACTAAGGGACTATGGATGGCAGCGAGTAGAATTGGTGGAGGGTTGCGTCCATCGGAGGAGGAGGAGAAGGAGAAGGAGTGATGCAAGTAAAATTAGTTCAATTTATGTAATTTTTTTTAATTTGAAAAGAAAAAGTCTCGTAAATTCTATGATTATATGTTGACTTTAAATGTGACTAATTTTAAAAACGAGTATTTTATTTAAGAGGATGATTCAAAAT CCAAAATGGGGTGTTGCGAGAATCGAACTCGCGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACACCCGTTCATGTTACCATTCGAAATATTAGTTTAATATTTTAATTTGACATTATCCGATTTCTCTGTTCTCAAATTTCTCGGTTTCTTTTGCGGCGAAGACGAAGGAAGCAAAATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGATTTCAACTAGGATTCACATCTAGCAGGTTTTATGGTGGAGGAAAACAAGATTTTGAATTCCCATCCCATTGGCAGAGGTTGAGAGAGAGGCCACTAAGGGACTATGGATGGCAGCGAGTAGAATTGGTGGAGGGTTGCGTCCATCGGAGGAGGAGGAGAAGGAGAAGGAGTGATGCAAGTAAAATTAGTTCAATTTATGTAATTTTTTTTAATTTGAAAAGAAAAAGTCTCGTAAATTCTATGATTATATGTTGACTTTAAATGTGACTAATTTTAAAAACGAGTATTTTATTTAAGAGGATGATTCAAAAT ATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGA MGASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF Homology
BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07 Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05 Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05 Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05 Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 0
BLAST of MC04g0443 vs. NCBI nr
Match: XP_022971306.1 (uncharacterized protein LOC111470060 [Cucurbita maxima]) HSP 1 Score: 353 bits (907), Expect = 1.79e-119 Identity = 208/287 (72.47%), Postives = 236/287 (82.23%), Query Frame = 0
BLAST of MC04g0443 vs. NCBI nr
Match: KAG6588422.1 (hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 352 bits (904), Expect = 5.10e-119 Identity = 207/287 (72.13%), Postives = 236/287 (82.23%), Query Frame = 0
BLAST of MC04g0443 vs. NCBI nr
Match: XP_023529380.1 (uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 351 bits (900), Expect = 2.54e-118 Identity = 209/293 (71.33%), Postives = 239/293 (81.57%), Query Frame = 0
BLAST of MC04g0443 vs. NCBI nr
Match: XP_022135882.1 (uncharacterized protein LOC111007723 [Momordica charantia]) HSP 1 Score: 344 bits (882), Expect = 5.03e-117 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of MC04g0443 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]) HSP 1 Score: 335 bits (859), Expect = 3.51e-112 Identity = 194/288 (67.36%), Postives = 232/288 (80.56%), Query Frame = 0
BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1) HSP 1 Score: 353 bits (907), Expect = 8.65e-120 Identity = 208/287 (72.47%), Postives = 236/287 (82.23%), Query Frame = 0
BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A6J1C409 (uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007723 PE=4 SV=1) HSP 1 Score: 344 bits (882), Expect = 2.43e-117 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1) HSP 1 Score: 335 bits (859), Expect = 1.70e-112 Identity = 194/288 (67.36%), Postives = 232/288 (80.56%), Query Frame = 0
BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1) HSP 1 Score: 332 bits (852), Expect = 1.66e-111 Identity = 190/286 (66.43%), Postives = 231/286 (80.77%), Query Frame = 0
BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1) HSP 1 Score: 242 bits (617), Expect = 1.69e-77 Identity = 128/163 (78.53%), Postives = 148/163 (90.80%), Query Frame = 0
BLAST of MC04g0443 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 147.1 bits (370), Expect = 2.1e-35 Identity = 128/304 (42.11%), Postives = 162/304 (53.29%), Query Frame = 0
BLAST of MC04g0443 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 146.7 bits (369), Expect = 2.7e-35 Identity = 119/269 (44.24%), Postives = 151/269 (56.13%), Query Frame = 0
BLAST of MC04g0443 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein ) HSP 1 Score: 124.4 bits (311), Expect = 1.5e-28 Identity = 98/244 (40.16%), Postives = 135/244 (55.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|