MC04g0443 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0443
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	CRM domain-containing protein
Location	MC04: 3545642 .. 3549277 (-)
RNA-Seq Expression	MC04g0443
Synteny	MC04g0443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAATGGGGTGTTGCGAGAATCGAACTCGCGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACACCCGTTCATGTTACCATTCGAAATATTAGTTTAATATTTTAATTTGACATTATCCGATTTCTCTGTTCTCAAATTTCTCGGTTTCTTTTGCGGCGAAGACGAAGGAAGCAAAATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGGTAACGTTGATTCTTGTAATGTTCTCTTCTCTGCTTCATTGATGTATTGTTTCGTTGTTTGATGCTCTCCGATTAGTCTTTATGGTACAAGAATTAGAGTTTCTTGGTCTAGTCTTCTTAATCCACTTGAAGGGAACAAGTGCATGGGACATCAATTGTCTGTATAAATTTTTATCTCCTGATTCTTATACAACTTGAATAGCAAGAACATTCTGCACCTAAAATGCTTGTGTGTTGTTTGGACAACAATTACCTGTTTCTTGGGCGGGAAATGTTAAAACTATGGTGAGAATGAACAGTTTGACGAATGATGAAATGATATCGTAACATTTGAATTTAAGGAAGTCTTATCTAGTTCAAAGATTCGAATGATACACTTCTCTTCAAATTTCATCCGTGAAGAGAGACTGCATATGGTTAAGCATTTGCATTATGTATGATTCTCTTCCCTGTCTTTTAAATGCACAAAAAACTTCAATAATCTTCATGTACTTGTGTTGTCAACTTGCTCTTCATTCATTTTCTGTATGTTTAAATACGATTTTCTCACAAAAGAGAGAGAAATTTGCAGTTCGTTCATTTTCTGTATGAAAAGTTTAACTAGTTCATAAAGTTTCACTAGTGACATTTCTTCTTGATTGGGTTTTGTTTATGAAGGAATATGTAGCCTCTGGAACTCAATTGTGATTTCTCTATTTGTAATCTTGACTAATGGCTCCAATTTATGCGTACTTTCTGATTTAAATGTCGAATATTGAGAAAGTCCAAACTAGAATAAAAGAAACTGAACCATGGGATACAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGGTATAGGAAATGGATTGGCATTCTTGATATTTTCTTGAAGGAACAAAAAAAAGTGTCAACATTCTATGACAAGGTCACTCTTGAATTTGAATTCTTCCAAACTATGCAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGATTTCAACTAGGATTCACATCTAGCAGGTTTTATGGTGGAGGAAAACAAGATTTTGAATTCCCATCCCATGTAAGTTTTGTCATACCATTCTAAATCTTTGTAGTTTTCATTTAGTTCATTAACTTTGAAATTTTACTCTGTTTCCACTTCACTGGTTTAGAGTTCAAACAAGATTGTATTGTTTGTGTGAGTTAGTAGGAGAAGTTCAAATTACAATTGTCATAGAACATGAGATCAGCCTCTGAAGATGAAGACATTGAATTTGAGTCTAGTTCCATGAATTCATCTTCCATTTGAAAAAGATTATACCCAAAAAAAAAAAAAAAAAAAAAAACTCTGTCTAGGAGAAATTATGATAAATTCTTTTCAGATTGATGATCATGCCATGGTGTCAAAGTGGCTGATATACAAAGAAAAAAAAATAAAATCAGAATGCATGTCTTAGATGTGCCACATCTATATTCGAGTGTGGTGACATGATTTTATTCTGTGTTTGGATTCATTGGTATTCACAGGTGGCATTTAGGGGTAGTTTGGTAACTATGTTGTTTCTTGTTTTTCATTTTTTAAAATATTTTCCAAATTTGCAAATTTCCTATTTTTTTCAACTAAATGTAGTACAGTCAGACAATTGTCCTGTGAAATTAGTCGAGGTTAGCGGATCTGGACACTCGGGATATCAAAAAGAAAAAAAGGCCCATAGTTCGGAGAAAGTGAATGCAGTTTTGGGATGGGGTAACCATACAATTTTAAATAGACAATTTCAAAAAATGGTCAAAAGACCCTCAGACGAACGACCCACTAAAAAATAGGAAGATATCTTCTCACTTTTTAAGTACCAAATTACTCCTCTCTAACTAAGTGTTATTTTTATTTTTCTTTCTTTCCTTTTTTATAGGATAATCCTAACCATATTTTCTCCAACCCTATTTATAGGATAATAAAAAATACAATGTATTTTTGTGTTGATACAAAATAAACAGATAGGATGTGTTTTTGTATGTAGCTCTAGATTACCAATCAAAAGGAAGAAATTCAAAGAATATACCTCTTCAGCCTAACACTACAATAGAAATTTCTATGCATTATTCATCGTATGAATTCGTGGTAAGAGAAAAATATAGAAGATAGAAGTATAACTTTTTAAACACAAATTAATAATACAAAAAGAATTTATAGTAGGTGTCTATATTTGTTATATTTGTTACTTTTTTTTAAATGACCAAATAGTTCTTATTAATAAAAATGTCAATCTGTATTTTTTCAACTATTTCATTAGGGTTGATTTTGACCTTTTGATTTTACTATTTTTATTATTATATTTAAAATAAAATATTAATATTTCTCCTAAATTCAATTTTTTTTTGTTATTTTTTTACTATATTATCTCAATATATGTACATATATAAACCGACCTCACGAGATACATTCATGGCGGCTAGTGGCAGAGGTTGAGAGAGAGGCCACTAAGGGACTATGGATGGCAGCGAGTAGAATTGGTGGAGGGTTGCGTCCATCGGAGGAGGAGGAGAAGGAGAAGGAGTGATGCAAGTAAAATTAGTTCAATTTATGTAATTTTTTTTAATTTGAAAAGAAAAAGTCTCGTAAATTCTATGATTATATGTTGACTTTAAATGTGACTAATTTTAAAAACGAGTATTTTATTTAAGAGGATGATTCAAAAT

mRNA sequence

CCAAAATGGGGTGTTGCGAGAATCGAACTCGCGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACACCCGTTCATGTTACCATTCGAAATATTAGTTTAATATTTTAATTTGACATTATCCGATTTCTCTGTTCTCAAATTTCTCGGTTTCTTTTGCGGCGAAGACGAAGGAAGCAAAATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGATTTCAACTAGGATTCACATCTAGCAGGTTTTATGGTGGAGGAAAACAAGATTTTGAATTCCCATCCCATTGGCAGAGGTTGAGAGAGAGGCCACTAAGGGACTATGGATGGCAGCGAGTAGAATTGGTGGAGGGTTGCGTCCATCGGAGGAGGAGGAGAAGGAGAAGGAGTGATGCAAGTAAAATTAGTTCAATTTATGTAATTTTTTTTAATTTGAAAAGAAAAAGTCTCGTAAATTCTATGATTATATGTTGACTTTAAATGTGACTAATTTTAAAAACGAGTATTTTATTTAAGAGGATGATTCAAAAT

Coding sequence (CDS)

ATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGA

Protein sequence

MGASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF

Homology

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BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 0


Query: 144 LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVEL 203
           LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L+NC  + 
Sbjct: 2   LTGKQKRFLRSKAHHLTPIFQ---VGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDK 61

Query: 204 DDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAE 240
           +D    L + + S +V  IG T+++Y+ S    + E
Sbjct: 62  NDVAEALVKGSRSQLVQTIGNTIVLYKESKENKQIE 94

[Close]

BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 143 SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVE 202
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 203 LDDAVRQLEESTGSVVVSQIGRTVIIYRPS 233
               V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

[Close]

BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 143 SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVE 202
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 203 LDDAVRQLEESTGSVVVSQIGRTVIIYRPS 233
               V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

[Close]

BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 143 SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVE 202
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 203 LDDAVRQLEESTGSVVVSQIGRTVIIYRPS 233
               V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

[Close]

BLAST of MC04g0443 vs. NCBI nr
Match: XP_022971306.1 (uncharacterized protein LOC111470060 [Cucurbita maxima])

HSP 1 Score: 353 bits (907), Expect = 1.79e-119
Identity = 208/287 (72.47%), Postives = 236/287 (82.23%), Query Frame = 0


Query: 1   MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASIMSS    HLIHSLLLRSVP S S+     +A +S  C  QF+PNSSIFLIR+SPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESI 120
           R R F PSASVS ++SFSS +S  S V F E+DD I+D+D+SDYE EV I DFELE+ ++
Sbjct: 61  RSRSFTPSASVSFSRSFSSIISGTSAVGF-EDDDVIDDDDESDYEDEVEIEDFELEDNTV 120

Query: 121 GGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPG 180
               +    S  SS+VV+ SEVK++PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPG
Sbjct: 121 EDGLETAVASDSSSAVVSRSEVKSIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPG 180

Query: 181 LAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKM 240
           LA SF+ETLEANELLKIK+L NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKM
Sbjct: 181 LATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSISKM 240

Query: 241 KAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           KAEE+KR+ARKIYVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Sbjct: 241 KAEEEKRRARKIYVRKEPDRVKLFLQNKVQTP--RSSNRGRRGSSRF 284

[Close]

BLAST of MC04g0443 vs. NCBI nr
Match: KAG6588422.1 (hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352 bits (904), Expect = 5.10e-119
Identity = 207/287 (72.13%), Postives = 236/287 (82.23%), Query Frame = 0


Query: 1   MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASIMSS    HLIHSLLLRSVP S S+     +A +S  C  QF+PNSSIFLIR+SPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESI 120
           R R F PSASVS ++SFSS +S  S V F E+DD I+D+++SDYE EV I DFELE+ ++
Sbjct: 61  RSRSFTPSASVSFSRSFSSTISDTSAVGF-EDDDVIDDDEESDYEDEVEIEDFELEDNTV 120

Query: 121 GGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPG 180
               +    S  SS+VV+ SEVKN+PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPG
Sbjct: 121 EDGLETAVASDSSSAVVSISEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPG 180

Query: 181 LAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKM 240
           LA SF+ETLEANELLKIK+L NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKM
Sbjct: 181 LATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSISKM 240

Query: 241 KAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           KAEE+KR+ARK+YVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Sbjct: 241 KAEEEKRRARKMYVRKEPDRVKLFLQNKVQTP--RSSNRGRRGSSRF 284

[Close]

BLAST of MC04g0443 vs. NCBI nr
Match: XP_023529380.1 (uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351 bits (900), Expect = 2.54e-118
Identity = 209/293 (71.33%), Postives = 239/293 (81.57%), Query Frame = 0


Query: 1   MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASIMSS    HLIHSLLLRSVP S S+  S  +AA+S  C  QF+PNSSIFLIR+SPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVD------FE 120
           R R F+PSASVS ++SFSS +S  S V F E+DD I+D+D+SDYE EV I D      FE
Sbjct: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGF-EDDDVIDDDDESDYEDEVEIEDEVEIEDFE 120

Query: 121 LEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGK 180
           LE+ ++    +    S  SS+VV+ SEVKN+PSLTVKEKKELASYAHSLGKKLK+QLVGK
Sbjct: 121 LEDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGK 180

Query: 181 SGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYR 240
           SGVTPGLA SF+ETLEANELLKIK+L NCP EL+D V+QLEESTGSVVVS+IGRTVIIYR
Sbjct: 181 SGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYR 240

Query: 241 PSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           PSISKMKAEE+KR+ARK+YVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Sbjct: 241 PSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTP--RSSNRGRRGSSRF 290

[Close]

BLAST of MC04g0443 vs. NCBI nr
Match: XP_022135882.1 (uncharacterized protein LOC111007723 [Momordica charantia])

HSP 1 Score: 344 bits (882), Expect = 5.03e-117
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 97  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 156
           DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA
Sbjct: 9   DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 68

Query: 157 HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 216
           HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS
Sbjct: 69  HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 128

Query: 217 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 276
           VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG
Sbjct: 129 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 188

Query: 277 RRGSSRF 283
           RRGSSRF
Sbjct: 189 RRGSSRF 195

[Close]

BLAST of MC04g0443 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo])

HSP 1 Score: 335 bits (859), Expect = 3.51e-112
Identity = 194/288 (67.36%), Postives = 232/288 (80.56%), Query Frame = 0


Query: 1   MGASIMSSRPHL-IHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSP 60
           M ASI+SS  H   HSLLLRSVP S S+     +  AA ST CF QF+P+SS FL R+SP
Sbjct: 1   MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAFSTVCFHQFKPSSSTFLTRKSP 60

Query: 61  HRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEES 120
           H  R F PS S+S ++ FSS +S PSEV F+E DDEIED+D+SDYE EV +      E+S
Sbjct: 61  HYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEM------EDS 120

Query: 121 IGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTP 180
           +G  ++    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTP
Sbjct: 121 VGDGTENGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTP 180

Query: 181 GLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISK 240
           GLA SF+ETLEANELLKIKIL NCP +L+D VR+LEESTGSVVV+QIGRTVIIYRPSI+K
Sbjct: 181 GLATSFIETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVIIYRPSITK 240

Query: 241 MKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           MKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Sbjct: 241 MKAEEEKRRSRKIYIRKEPDRVKSILQKKVETP--RSSNRGRRGTSRY 280

[Close]

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1)

HSP 1 Score: 353 bits (907), Expect = 8.65e-120
Identity = 208/287 (72.47%), Postives = 236/287 (82.23%), Query Frame = 0


Query: 1   MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASIMSS    HLIHSLLLRSVP S S+     +A +S  C  QF+PNSSIFLIR+SPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESI 120
           R R F PSASVS ++SFSS +S  S V F E+DD I+D+D+SDYE EV I DFELE+ ++
Sbjct: 61  RSRSFTPSASVSFSRSFSSIISGTSAVGF-EDDDVIDDDDESDYEDEVEIEDFELEDNTV 120

Query: 121 GGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPG 180
               +    S  SS+VV+ SEVK++PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPG
Sbjct: 121 EDGLETAVASDSSSAVVSRSEVKSIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPG 180

Query: 181 LAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKM 240
           LA SF+ETLEANELLKIK+L NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKM
Sbjct: 181 LATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSISKM 240

Query: 241 KAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           KAEE+KR+ARKIYVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Sbjct: 241 KAEEEKRRARKIYVRKEPDRVKLFLQNKVQTP--RSSNRGRRGSSRF 284

[Close]

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A6J1C409 (uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007723 PE=4 SV=1)

HSP 1 Score: 344 bits (882), Expect = 2.43e-117
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 97  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 156
           DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA
Sbjct: 9   DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 68

Query: 157 HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 216
           HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS
Sbjct: 69  HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 128

Query: 217 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 276
           VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG
Sbjct: 129 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 188

Query: 277 RRGSSRF 283
           RRGSSRF
Sbjct: 189 RRGSSRF 195

[Close]

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1)

HSP 1 Score: 335 bits (859), Expect = 1.70e-112
Identity = 194/288 (67.36%), Postives = 232/288 (80.56%), Query Frame = 0


Query: 1   MGASIMSSRPHL-IHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSP 60
           M ASI+SS  H   HSLLLRSVP S S+     +  AA ST CF QF+P+SS FL R+SP
Sbjct: 1   MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAFSTVCFHQFKPSSSTFLTRKSP 60

Query: 61  HRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEES 120
           H  R F PS S+S ++ FSS +S PSEV F+E DDEIED+D+SDYE EV +      E+S
Sbjct: 61  HYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEM------EDS 120

Query: 121 IGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTP 180
           +G  ++    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTP
Sbjct: 121 VGDGTENGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTP 180

Query: 181 GLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISK 240
           GLA SF+ETLEANELLKIKIL NCP +L+D VR+LEESTGSVVV+QIGRTVIIYRPSI+K
Sbjct: 181 GLATSFIETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVIIYRPSITK 240

Query: 241 MKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           MKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Sbjct: 241 MKAEEEKRRSRKIYIRKEPDRVKSILQKKVETP--RSSNRGRRGTSRY 280

[Close]

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1)

HSP 1 Score: 332 bits (852), Expect = 1.66e-111
Identity = 190/286 (66.43%), Postives = 231/286 (80.77%), Query Frame = 0


Query: 1   MGASIMSSRPHLIHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASI+SS  H   SLLLRS+P S S+     + AAA+ST CF QF+P+SS  L R SPH
Sbjct: 1   MGASIISSHSH---SLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTLLTRESPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESI 120
            +R F PSA +S ++SFSS +S PSEV F+E DDEIED+D+SDYE EV +      E+ +
Sbjct: 61  HYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYEDEVEM------EDEV 120

Query: 121 GGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPG 180
           G  ++    S+LSS +++ +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPG
Sbjct: 121 GDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPG 180

Query: 181 LAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKM 240
           LA SF+ETLEANELLKIKIL NCP EL+D VR+L ESTGSVVV+QIGRTVIIYRPSI+KM
Sbjct: 181 LATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKM 240

Query: 241 KAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSR 282
           KAEE+KR+ARK+Y+RKEPDRVKSILQ K++TP   +SNRGRRG+SR
Sbjct: 241 KAEEEKRRARKVYMRKEPDRVKSILQKKIETP--QSSNRGRRGTSR 275

[Close]

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 1.69e-77
Identity = 128/163 (78.53%), Postives = 148/163 (90.80%), Query Frame = 0


Query: 121 QADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAIS 180
           +    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA S
Sbjct: 2   ETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATS 61

Query: 181 FVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEE 240
           F+ETLEANELLKIKIL NCP EL+D VR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE
Sbjct: 62  FIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEE 121

Query: 241 KKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           +KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Sbjct: 122 EKRRSRKIYIRKEPDRVKSILQKKVETP--RSSNRGRRGTSRY 162

[Close]

BLAST of MC04g0443 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-35
Identity = 128/304 (42.11%), Postives = 162/304 (53.29%), Query Frame = 0


Query: 3   ASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA 62
           AS   S  HLIH+LL    P     S     L   CF      S+     R+  RF+ F+
Sbjct: 6   ASASCSSTHLIHNLLRHPKP----PSPVCLFLRPFCFSASVSQSN----HRNKPRFQSFS 65

Query: 63  ----PSASVS-VAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEES-- 122
               P  S S V +SFSS      E +  EED+E EDED S  E E    + E E++S  
Sbjct: 66  SKPLPCHSASLVVKSFSSI----DEPDL-EEDEESEDEDFSAEEYEYEDEEEEDEQDSGV 125

Query: 123 ------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKL 182
                 I     ++ VS++          K   S      L++KEKKELASYAHSLG KL
Sbjct: 126 VVSERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKL 185

Query: 183 KTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIG 242
           K QLVGKSGVT  +  SF+ETLE NELLK+KI +  P EL+DAV+ LEE+TGSV V QIG
Sbjct: 186 KCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIG 245

Query: 243 RTVIIYRPSISKMKAEEKKRQARKIYVRKEPD-----RVKSILQNKVQTPGISNSNRGRR 283
           RTVI+YRPS +KMKAE KK++  ++ + +          K   +   + P      RGRR
Sbjct: 246 RTVILYRPSPTKMKAEAKKKEVERMSITRRQKYANTRPTKPFRREYSERP----DGRGRR 292

[Close]

BLAST of MC04g0443 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-35
Identity = 119/269 (44.24%), Postives = 151/269 (56.13%), Query Frame = 0


Query: 3   ASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA 62
           AS   S  HLIH+LL    P     S     L   CF      S+     R+  RF+ F+
Sbjct: 6   ASASCSSTHLIHNLLRHPKP----PSPVCLFLRPFCFSASVSQSN----HRNKPRFQSFS 65

Query: 63  ----PSASVS-VAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEES-- 122
               P  S S V +SFSS      E +  EED+E EDED S  E E    + E E++S  
Sbjct: 66  SKPLPCHSASLVVKSFSSI----DEPDL-EEDEESEDEDFSAEEYEYEDEEEEDEQDSGV 125

Query: 123 ------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKL 182
                 I     ++ VS++          K   S      L++KEKKELASYAHSLG KL
Sbjct: 126 VVSERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKL 185

Query: 183 KTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIG 242
           K QLVGKSGVT  +  SF+ETLE NELLK+KI +  P EL+DAV+ LEE+TGSV V QIG
Sbjct: 186 KCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIG 245

Query: 243 RTVIIYRPSISKMKAEEKKRQARKIYVRK 253
           RTVI+YRPS +KMKAE KK++  ++ + +
Sbjct: 246 RTVILYRPSPTKMKAEAKKKEVERMSITR 261

[Close]

BLAST of MC04g0443 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-28
Identity = 98/244 (40.16%), Postives = 135/244 (55.33%), Query Frame = 0


Query: 1   MGASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRD 60
           M  +  S+  +LIH LL    P      T+   L        RP S   L R+S H    
Sbjct: 1   MATAKSSTLTNLIHHLLRHRKP------TSPVCLF------LRPFSVSLLGRKSSHH--- 60

Query: 61  FAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESIGGES 120
              S+S+ + + + S         F+  D+  +DED+         V        I  + 
Sbjct: 61  AWISSSLPLPRPYISFSPLLVPKSFSSVDESEQDEDN---------VSLVASLNEINDDG 120

Query: 121 QADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAIS 180
           Q D  S+L+   +  +   +   L+ KEK++LASYAH LG KLK+QLVGKSGVT  + +S
Sbjct: 121 QEDG-SELTMVSMRENRRSSALELSAKEKRKLASYAHHLGDKLKSQLVGKSGVTDSVVLS 180

Query: 181 FVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEE 240
           FVETLE NELLK+KI R CP EL+D + +LEE+TGSV V QI RTVI+YRPS +K+KA+E
Sbjct: 181 FVETLEKNELLKVKIHRTCPGELEDMILRLEEATGSVSVGQIARTVILYRPSPTKLKADE 219

Query: 241 KKRQ 245
            K++
Sbjct: 241 DKKR 219

The following BLAST results are available for this feature:

BLAST of MC04g0443 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P54454	1.1e-07	35.42	Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN...	[more]
P0AGK6	8.4e-05	32.22	RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1	[more]
P0AGK5	8.4e-05	32.22	RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 ...	[more]
P0AGK4	8.4e-05	32.22	RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 ...	[more]

BLAST of MC04g0443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971306.1	1.79e-119	72.47	uncharacterized protein LOC111470060 [Cucurbita maxima]	[more]
KAG6588422.1	5.10e-119	72.13	hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023529380.1	2.54e-118	71.33	uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]	[more]
XP_022135882.1	5.03e-117	100.00	uncharacterized protein LOC111007723 [Momordica charantia]	[more]
XP_008448058.1	3.51e-112	67.36	PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]	[more]

BLAST of MC04g0443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2Z3	8.65e-120	72.47	uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060...	[more]
A0A6J1C409	2.43e-117	100.00	uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A1S3BJF7	1.70e-112	67.36	uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=...	[more]
A0A0A0K2C3	1.66e-111	66.43	CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV...	[more]
A0A5D3DFJ1	1.69e-77	78.53	Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of MC04g0443 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39040.1	2.1e-35	42.11	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT4G39040.2	2.7e-35	44.24	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT2G21350.1	1.5e-28	40.16	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 144..230 e-value: 8.1E-24 score: 95.1
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 144..230 e-value: 2.9E-15 score: 56.2
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 142..241 score: 16.94384
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 143..244 e-value: 4.0E-27 score: 96.1
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 143..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..283
None	No IPR available	PANTHER	PTHR47714:SF1	CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 4..283
None	No IPR available	PANTHER	PTHR47714	CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 4..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0443.1	MC04g0443.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding