MC04g0443 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g0443
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionCRM domain-containing protein
LocationMC04: 3545642 .. 3549277 (-)
RNA-Seq ExpressionMC04g0443
SyntenyMC04g0443
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAATGGGGTGTTGCGAGAATCGAACTCGCGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACACCCGTTCATGTTACCATTCGAAATATTAGTTTAATATTTTAATTTGACATTATCCGATTTCTCTGTTCTCAAATTTCTCGGTTTCTTTTGCGGCGAAGACGAAGGAAGCAAAATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGGTAACGTTGATTCTTGTAATGTTCTCTTCTCTGCTTCATTGATGTATTGTTTCGTTGTTTGATGCTCTCCGATTAGTCTTTATGGTACAAGAATTAGAGTTTCTTGGTCTAGTCTTCTTAATCCACTTGAAGGGAACAAGTGCATGGGACATCAATTGTCTGTATAAATTTTTATCTCCTGATTCTTATACAACTTGAATAGCAAGAACATTCTGCACCTAAAATGCTTGTGTGTTGTTTGGACAACAATTACCTGTTTCTTGGGCGGGAAATGTTAAAACTATGGTGAGAATGAACAGTTTGACGAATGATGAAATGATATCGTAACATTTGAATTTAAGGAAGTCTTATCTAGTTCAAAGATTCGAATGATACACTTCTCTTCAAATTTCATCCGTGAAGAGAGACTGCATATGGTTAAGCATTTGCATTATGTATGATTCTCTTCCCTGTCTTTTAAATGCACAAAAAACTTCAATAATCTTCATGTACTTGTGTTGTCAACTTGCTCTTCATTCATTTTCTGTATGTTTAAATACGATTTTCTCACAAAAGAGAGAGAAATTTGCAGTTCGTTCATTTTCTGTATGAAAAGTTTAACTAGTTCATAAAGTTTCACTAGTGACATTTCTTCTTGATTGGGTTTTGTTTATGAAGGAATATGTAGCCTCTGGAACTCAATTGTGATTTCTCTATTTGTAATCTTGACTAATGGCTCCAATTTATGCGTACTTTCTGATTTAAATGTCGAATATTGAGAAAGTCCAAACTAGAATAAAAGAAACTGAACCATGGGATACAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGGTATAGGAAATGGATTGGCATTCTTGATATTTTCTTGAAGGAACAAAAAAAAGTGTCAACATTCTATGACAAGGTCACTCTTGAATTTGAATTCTTCCAAACTATGCAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGATTTCAACTAGGATTCACATCTAGCAGGTTTTATGGTGGAGGAAAACAAGATTTTGAATTCCCATCCCATGTAAGTTTTGTCATACCATTCTAAATCTTTGTAGTTTTCATTTAGTTCATTAACTTTGAAATTTTACTCTGTTTCCACTTCACTGGTTTAGAGTTCAAACAAGATTGTATTGTTTGTGTGAGTTAGTAGGAGAAGTTCAAATTACAATTGTCATAGAACATGAGATCAGCCTCTGAAGATGAAGACATTGAATTTGAGTCTAGTTCCATGAATTCATCTTCCATTTGAAAAAGATTATACCCAAAAAAAAAAAAAAAAAAAAAAACTCTGTCTAGGAGAAATTATGATAAATTCTTTTCAGATTGATGATCATGCCATGGTGTCAAAGTGGCTGATATACAAAGAAAAAAAAATAAAATCAGAATGCATGTCTTAGATGTGCCACATCTATATTCGAGTGTGGTGACATGATTTTATTCTGTGTTTGGATTCATTGGTATTCACAGGTGGCATTTAGGGGTAGTTTGGTAACTATGTTGTTTCTTGTTTTTCATTTTTTAAAATATTTTCCAAATTTGCAAATTTCCTATTTTTTTCAACTAAATGTAGTACAGTCAGACAATTGTCCTGTGAAATTAGTCGAGGTTAGCGGATCTGGACACTCGGGATATCAAAAAGAAAAAAAGGCCCATAGTTCGGAGAAAGTGAATGCAGTTTTGGGATGGGGTAACCATACAATTTTAAATAGACAATTTCAAAAAATGGTCAAAAGACCCTCAGACGAACGACCCACTAAAAAATAGGAAGATATCTTCTCACTTTTTAAGTACCAAATTACTCCTCTCTAACTAAGTGTTATTTTTATTTTTCTTTCTTTCCTTTTTTATAGGATAATCCTAACCATATTTTCTCCAACCCTATTTATAGGATAATAAAAAATACAATGTATTTTTGTGTTGATACAAAATAAACAGATAGGATGTGTTTTTGTATGTAGCTCTAGATTACCAATCAAAAGGAAGAAATTCAAAGAATATACCTCTTCAGCCTAACACTACAATAGAAATTTCTATGCATTATTCATCGTATGAATTCGTGGTAAGAGAAAAATATAGAAGATAGAAGTATAACTTTTTAAACACAAATTAATAATACAAAAAGAATTTATAGTAGGTGTCTATATTTGTTATATTTGTTACTTTTTTTTAAATGACCAAATAGTTCTTATTAATAAAAATGTCAATCTGTATTTTTTCAACTATTTCATTAGGGTTGATTTTGACCTTTTGATTTTACTATTTTTATTATTATATTTAAAATAAAATATTAATATTTCTCCTAAATTCAATTTTTTTTTGTTATTTTTTTACTATATTATCTCAATATATGTACATATATAAACCGACCTCACGAGATACATTCATGGCGGCTAGTGGCAGAGGTTGAGAGAGAGGCCACTAAGGGACTATGGATGGCAGCGAGTAGAATTGGTGGAGGGTTGCGTCCATCGGAGGAGGAGGAGAAGGAGAAGGAGTGATGCAAGTAAAATTAGTTCAATTTATGTAATTTTTTTTAATTTGAAAAGAAAAAGTCTCGTAAATTCTATGATTATATGTTGACTTTAAATGTGACTAATTTTAAAAACGAGTATTTTATTTAAGAGGATGATTCAAAAT

mRNA sequence

CCAAAATGGGGTGTTGCGAGAATCGAACTCGCGACCTCTCGCACCCGAAGCGAGAATCATACCACTAGACCAAACACCCGTTCATGTTACCATTCGAAATATTAGTTTAATATTTTAATTTGACATTATCCGATTTCTCTGTTCTCAAATTTCTCGGTTTCTTTTGCGGCGAAGACGAAGGAAGCAAAATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGATTTCAACTAGGATTCACATCTAGCAGGTTTTATGGTGGAGGAAAACAAGATTTTGAATTCCCATCCCATTGGCAGAGGTTGAGAGAGAGGCCACTAAGGGACTATGGATGGCAGCGAGTAGAATTGGTGGAGGGTTGCGTCCATCGGAGGAGGAGGAGAAGGAGAAGGAGTGATGCAAGTAAAATTAGTTCAATTTATGTAATTTTTTTTAATTTGAAAAGAAAAAGTCTCGTAAATTCTATGATTATATGTTGACTTTAAATGTGACTAATTTTAAAAACGAGTATTTTATTTAAGAGGATGATTCAAAAT

Coding sequence (CDS)

ATGGGAGCTTCGATAATGTCCTCTCGCCCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTTCCCTTCTCCTCCTCCTCCTCCACCACCGCCGCTGCCCTCTCCACCGGTTGCTTCCGTCAATTCAGACCAAACAGTTCAATCTTCCTCATTCGTCGATCTCCTCATCGATTCCGGGATTTCGCTCCCTCCGCATCCGTTTCCGTCGCTCAATCCTTTTCCTCCGCCCTTTCTTGTCCCTCTGAGGTCGAATTCAATGAGGAGGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGGTGAAGTTCGAATCGTGGATTTCGAACTTGAGGAGGAGAGCATTGGGGGTGAATCGCAAGCTGATGCAGTTTCGCAGTTGTCTTCGTCGGTGGTGAATGGAAGTGAAGTGAAGAATCTTCCGAGCTTGACGGTTAAGGAGAAGAAAGAGTTAGCGTCATACGCTCATAGCCTCGGGAAGAAGCTGAAAACTCAGTTGGTGGGCAAGTCTGGCGTTACTCCTGGCTTGGCTATTTCTTTCGTCGAGACGCTTGAAGCCAACGAGCTTCTCAAGATCAAAATTCTCAGGAACTGTCCAGTGGAGCTGGATGATGCGGTGAGGCAATTGGAGGAATCAACTGGCTCTGTGGTGGTCAGTCAAATTGGCAGAACTGTTATTATTTACAGGCCCAGCATCTCAAAAATGAAAGCCGAGGAGAAAAAAAGGCAAGCACGGAAAATTTACGTGAGAAAAGAACCCGATCGGGTGAAATCCATTCTACAGAATAAAGTACAAACACCCGGGATCTCTAACTCCAACCGCGGTCGTCGTGGAAGCAGCAGGTTTTGA

Protein sequence

MGASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF
Homology
BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P54454 (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-07
Identity = 34/96 (35.42%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 144 LTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVEL 203
           LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L+NC  + 
Sbjct: 2   LTGKQKRFLRSKAHHLTPIFQ---VGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDK 61

Query: 204 DDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAE 240
           +D    L + + S +V  IG T+++Y+ S    + E
Sbjct: 62  NDVAEALVKGSRSQLVQTIGNTIVLYKESKENKQIE 94

BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P0AGK6 (RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 0

Query: 143 SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVE 202
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 203 LDDAVRQLEESTGSVVVSQIGRTVIIYRPS 233
               V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P0AGK5 (RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=yhbY PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 0

Query: 143 SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVE 202
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 203 LDDAVRQLEESTGSVVVSQIGRTVIIYRPS 233
               V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

BLAST of MC04g0443 vs. ExPASy Swiss-Prot
Match: P0AGK4 (RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 8.4e-05
Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 0

Query: 143 SLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVE 202
           +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI       
Sbjct: 2   NLSTKQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRET 61

Query: 203 LDDAVRQLEESTGSVVVSQIGRTVIIYRPS 233
               V  +   TG+  V  IG+T+++YRP+
Sbjct: 62  KTLIVEAIVRETGACNVQVIGKTLVLYRPT 88

BLAST of MC04g0443 vs. NCBI nr
Match: XP_022971306.1 (uncharacterized protein LOC111470060 [Cucurbita maxima])

HSP 1 Score: 353 bits (907), Expect = 1.79e-119
Identity = 208/287 (72.47%), Postives = 236/287 (82.23%), Query Frame = 0

Query: 1   MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASIMSS    HLIHSLLLRSVP S S+     +A +S  C  QF+PNSSIFLIR+SPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESI 120
           R R F PSASVS ++SFSS +S  S V F E+DD I+D+D+SDYE EV I DFELE+ ++
Sbjct: 61  RSRSFTPSASVSFSRSFSSIISGTSAVGF-EDDDVIDDDDESDYEDEVEIEDFELEDNTV 120

Query: 121 GGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPG 180
               +    S  SS+VV+ SEVK++PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPG
Sbjct: 121 EDGLETAVASDSSSAVVSRSEVKSIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPG 180

Query: 181 LAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKM 240
           LA SF+ETLEANELLKIK+L NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKM
Sbjct: 181 LATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSISKM 240

Query: 241 KAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           KAEE+KR+ARKIYVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Sbjct: 241 KAEEEKRRARKIYVRKEPDRVKLFLQNKVQTP--RSSNRGRRGSSRF 284

BLAST of MC04g0443 vs. NCBI nr
Match: KAG6588422.1 (hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352 bits (904), Expect = 5.10e-119
Identity = 207/287 (72.13%), Postives = 236/287 (82.23%), Query Frame = 0

Query: 1   MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASIMSS    HLIHSLLLRSVP S S+     +A +S  C  QF+PNSSIFLIR+SPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESI 120
           R R F PSASVS ++SFSS +S  S V F E+DD I+D+++SDYE EV I DFELE+ ++
Sbjct: 61  RSRSFTPSASVSFSRSFSSTISDTSAVGF-EDDDVIDDDEESDYEDEVEIEDFELEDNTV 120

Query: 121 GGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPG 180
               +    S  SS+VV+ SEVKN+PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPG
Sbjct: 121 EDGLETAVASDSSSAVVSISEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPG 180

Query: 181 LAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKM 240
           LA SF+ETLEANELLKIK+L NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKM
Sbjct: 181 LATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSISKM 240

Query: 241 KAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           KAEE+KR+ARK+YVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Sbjct: 241 KAEEEKRRARKMYVRKEPDRVKLFLQNKVQTP--RSSNRGRRGSSRF 284

BLAST of MC04g0443 vs. NCBI nr
Match: XP_023529380.1 (uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351 bits (900), Expect = 2.54e-118
Identity = 209/293 (71.33%), Postives = 239/293 (81.57%), Query Frame = 0

Query: 1   MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASIMSS    HLIHSLLLRSVP S S+  S  +AA+S  C  QF+PNSSIFLIR+SPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLSRPSAAISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVD------FE 120
           R R F+PSASVS ++SFSS +S  S V F E+DD I+D+D+SDYE EV I D      FE
Sbjct: 61  RSRSFSPSASVSFSRSFSSTISDTSAVGF-EDDDVIDDDDESDYEDEVEIEDEVEIEDFE 120

Query: 121 LEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGK 180
           LE+ ++    +    S  SS+VV+ SEVKN+PSLTVKEKKELASYAHSLGKKLK+QLVGK
Sbjct: 121 LEDNTVEDGLETAVASDSSSAVVSRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGK 180

Query: 181 SGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYR 240
           SGVTPGLA SF+ETLEANELLKIK+L NCP EL+D V+QLEESTGSVVVS+IGRTVIIYR
Sbjct: 181 SGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVKQLEESTGSVVVSKIGRTVIIYR 240

Query: 241 PSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           PSISKMKAEE+KR+ARK+YVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Sbjct: 241 PSISKMKAEEEKRRARKMYVRKEPDRVKLFLQNKVQTP--RSSNRGRRGSSRF 290

BLAST of MC04g0443 vs. NCBI nr
Match: XP_022135882.1 (uncharacterized protein LOC111007723 [Momordica charantia])

HSP 1 Score: 344 bits (882), Expect = 5.03e-117
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0

Query: 97  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 156
           DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA
Sbjct: 9   DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 68

Query: 157 HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 216
           HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS
Sbjct: 69  HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 128

Query: 217 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 276
           VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG
Sbjct: 129 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 188

Query: 277 RRGSSRF 283
           RRGSSRF
Sbjct: 189 RRGSSRF 195

BLAST of MC04g0443 vs. NCBI nr
Match: XP_008448058.1 (PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo])

HSP 1 Score: 335 bits (859), Expect = 3.51e-112
Identity = 194/288 (67.36%), Postives = 232/288 (80.56%), Query Frame = 0

Query: 1   MGASIMSSRPHL-IHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSP 60
           M ASI+SS  H   HSLLLRSVP S S+     +  AA ST CF QF+P+SS FL R+SP
Sbjct: 1   MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAFSTVCFHQFKPSSSTFLTRKSP 60

Query: 61  HRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEES 120
           H  R F PS S+S ++ FSS +S PSEV F+E DDEIED+D+SDYE EV +      E+S
Sbjct: 61  HYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEM------EDS 120

Query: 121 IGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTP 180
           +G  ++    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTP
Sbjct: 121 VGDGTENGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTP 180

Query: 181 GLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISK 240
           GLA SF+ETLEANELLKIKIL NCP +L+D VR+LEESTGSVVV+QIGRTVIIYRPSI+K
Sbjct: 181 GLATSFIETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVIIYRPSITK 240

Query: 241 MKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           MKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Sbjct: 241 MKAEEEKRRSRKIYIRKEPDRVKSILQKKVETP--RSSNRGRRGTSRY 280

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A6J1I2Z3 (uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060 PE=4 SV=1)

HSP 1 Score: 353 bits (907), Expect = 8.65e-120
Identity = 208/287 (72.47%), Postives = 236/287 (82.23%), Query Frame = 0

Query: 1   MGASIMSS--RPHLIHSLLLRSVPFSSSS--STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASIMSS    HLIHSLLLRSVP S S+     +A +S  C  QF+PNSSIFLIR+SPH
Sbjct: 1   MGASIMSSPSHSHLIHSLLLRSVPSSLSTFLCRPSAVISAACSHQFKPNSSIFLIRQSPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESI 120
           R R F PSASVS ++SFSS +S  S V F E+DD I+D+D+SDYE EV I DFELE+ ++
Sbjct: 61  RSRSFTPSASVSFSRSFSSIISGTSAVGF-EDDDVIDDDDESDYEDEVEIEDFELEDNTV 120

Query: 121 GGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPG 180
               +    S  SS+VV+ SEVK++PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPG
Sbjct: 121 EDGLETAVASDSSSAVVSRSEVKSIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPG 180

Query: 181 LAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKM 240
           LA SF+ETLEANELLKIK+L NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSISKM
Sbjct: 181 LATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSISKM 240

Query: 241 KAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           KAEE+KR+ARKIYVRKEPDRVK  LQNKVQTP   +SNRGRRGSSRF
Sbjct: 241 KAEEEKRRARKIYVRKEPDRVKLFLQNKVQTP--RSSNRGRRGSSRF 284

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A6J1C409 (uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007723 PE=4 SV=1)

HSP 1 Score: 344 bits (882), Expect = 2.43e-117
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0

Query: 97  DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 156
           DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA
Sbjct: 9   DSDYEGEVRIVDFELEEESIGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYA 68

Query: 157 HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 216
           HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS
Sbjct: 69  HSLGKKLKTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGS 128

Query: 217 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 276
           VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG
Sbjct: 129 VVVSQIGRTVIIYRPSISKMKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRG 188

Query: 277 RRGSSRF 283
           RRGSSRF
Sbjct: 189 RRGSSRF 195

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A1S3BJF7 (uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=4 SV=1)

HSP 1 Score: 335 bits (859), Expect = 1.70e-112
Identity = 194/288 (67.36%), Postives = 232/288 (80.56%), Query Frame = 0

Query: 1   MGASIMSSRPHL-IHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSP 60
           M ASI+SS  H   HSLLLRSVP S S+     +  AA ST CF QF+P+SS FL R+SP
Sbjct: 1   MRASIISSHSHSHSHSLLLRSVPSSFSTFFSKPSATAAFSTVCFHQFKPSSSTFLTRKSP 60

Query: 61  HRFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEES 120
           H  R F PS S+S ++ FSS +S PSEV F+E DDEIED+D+SDYE EV +      E+S
Sbjct: 61  HYSRPFTPSTSLSFSRFFSSTVSGPSEVRFDEGDDEIEDKDESDYEDEVEM------EDS 120

Query: 121 IGGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTP 180
           +G  ++    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTP
Sbjct: 121 VGDGTENGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTP 180

Query: 181 GLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISK 240
           GLA SF+ETLEANELLKIKIL NCP +L+D VR+LEESTGSVVV+QIGRTVIIYRPSI+K
Sbjct: 181 GLATSFIETLEANELLKIKILGNCPEDLEDVVRKLEESTGSVVVNQIGRTVIIYRPSITK 240

Query: 241 MKAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           MKAEE+KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Sbjct: 241 MKAEEEKRRSRKIYIRKEPDRVKSILQKKVETP--RSSNRGRRGTSRY 280

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A0A0K2C3 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV=1)

HSP 1 Score: 332 bits (852), Expect = 1.66e-111
Identity = 190/286 (66.43%), Postives = 231/286 (80.77%), Query Frame = 0

Query: 1   MGASIMSSRPHLIHSLLLRSVPFSSSS----STTAAALSTGCFRQFRPNSSIFLIRRSPH 60
           MGASI+SS  H   SLLLRS+P S S+     + AAA+ST CF QF+P+SS  L R SPH
Sbjct: 1   MGASIISSHSH---SLLLRSLPSSFSTFFSKPSAAAAISTVCFHQFKPSSSTLLTRESPH 60

Query: 61  RFRDFAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESI 120
            +R F PSA +S ++SFSS +S PSEV F+E DDEIED+D+SDYE EV +      E+ +
Sbjct: 61  HYRPFTPSAPLSFSRSFSSTISDPSEVIFDEADDEIEDKDESDYEDEVEM------EDEV 120

Query: 121 GGESQADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPG 180
           G  ++    S+LSS +++ +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPG
Sbjct: 121 GDGTETGVASELSSPIMSRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPG 180

Query: 181 LAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKM 240
           LA SF+ETLEANELLKIKIL NCP EL+D VR+L ESTGSVVV+QIGRTVIIYRPSI+KM
Sbjct: 181 LATSFIETLEANELLKIKILGNCPEELEDVVRKLAESTGSVVVNQIGRTVIIYRPSITKM 240

Query: 241 KAEEKKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSR 282
           KAEE+KR+ARK+Y+RKEPDRVKSILQ K++TP   +SNRGRRG+SR
Sbjct: 241 KAEEEKRRARKVYMRKEPDRVKSILQKKIETP--QSSNRGRRGTSR 275

BLAST of MC04g0443 vs. ExPASy TrEMBL
Match: A0A5D3DFJ1 (Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1428G00840 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 1.69e-77
Identity = 128/163 (78.53%), Postives = 148/163 (90.80%), Query Frame = 0

Query: 121 QADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAIS 180
           +    S+LSS V+N +EVKN+PSLT+KEKKELASYAH LGKKLK+QLVGKSGVTPGLA S
Sbjct: 2   ETGVASELSSPVMNRNEVKNIPSLTIKEKKELASYAHGLGKKLKSQLVGKSGVTPGLATS 61

Query: 181 FVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEE 240
           F+ETLEANELLKIKIL NCP EL+D VR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE
Sbjct: 62  FIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEE 121

Query: 241 KKRQARKIYVRKEPDRVKSILQNKVQTPGISNSNRGRRGSSRF 283
           +KR++RKIY+RKEPDRVKSILQ KV+TP   +SNRGRRG+SR+
Sbjct: 122 EKRRSRKIYIRKEPDRVKSILQKKVETP--RSSNRGRRGTSRY 162

BLAST of MC04g0443 vs. TAIR 10
Match: AT4G39040.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-35
Identity = 128/304 (42.11%), Postives = 162/304 (53.29%), Query Frame = 0

Query: 3   ASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA 62
           AS   S  HLIH+LL    P     S     L   CF      S+     R+  RF+ F+
Sbjct: 6   ASASCSSTHLIHNLLRHPKP----PSPVCLFLRPFCFSASVSQSN----HRNKPRFQSFS 65

Query: 63  ----PSASVS-VAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEES-- 122
               P  S S V +SFSS      E +  EED+E EDED S  E E    + E E++S  
Sbjct: 66  SKPLPCHSASLVVKSFSSI----DEPDL-EEDEESEDEDFSAEEYEYEDEEEEDEQDSGV 125

Query: 123 ------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKL 182
                 I     ++ VS++          K   S      L++KEKKELASYAHSLG KL
Sbjct: 126 VVSERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKL 185

Query: 183 KTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIG 242
           K QLVGKSGVT  +  SF+ETLE NELLK+KI +  P EL+DAV+ LEE+TGSV V QIG
Sbjct: 186 KCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIG 245

Query: 243 RTVIIYRPSISKMKAEEKKRQARKIYVRKEPD-----RVKSILQNKVQTPGISNSNRGRR 283
           RTVI+YRPS +KMKAE KK++  ++ + +          K   +   + P      RGRR
Sbjct: 246 RTVILYRPSPTKMKAEAKKKEVERMSITRRQKYANTRPTKPFRREYSERP----DGRGRR 292

BLAST of MC04g0443 vs. TAIR 10
Match: AT4G39040.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-35
Identity = 119/269 (44.24%), Postives = 151/269 (56.13%), Query Frame = 0

Query: 3   ASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRDFA 62
           AS   S  HLIH+LL    P     S     L   CF      S+     R+  RF+ F+
Sbjct: 6   ASASCSSTHLIHNLLRHPKP----PSPVCLFLRPFCFSASVSQSN----HRNKPRFQSFS 65

Query: 63  ----PSASVS-VAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEES-- 122
               P  S S V +SFSS      E +  EED+E EDED S  E E    + E E++S  
Sbjct: 66  SKPLPCHSASLVVKSFSSI----DEPDL-EEDEESEDEDFSAEEYEYEDEEEEDEQDSGV 125

Query: 123 ------IGGESQADAVSQLSSSVVNGSEVKNLPS------LTVKEKKELASYAHSLGKKL 182
                 I     ++ VS++          K   S      L++KEKKELASYAHSLG KL
Sbjct: 126 VVSERGIEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKL 185

Query: 183 KTQLVGKSGVTPGLAISFVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIG 242
           K QLVGKSGVT  +  SF+ETLE NELLK+KI +  P EL+DAV+ LEE+TGSV V QIG
Sbjct: 186 KCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIG 245

Query: 243 RTVIIYRPSISKMKAEEKKRQARKIYVRK 253
           RTVI+YRPS +KMKAE KK++  ++ + +
Sbjct: 246 RTVILYRPSPTKMKAEAKKKEVERMSITR 261

BLAST of MC04g0443 vs. TAIR 10
Match: AT2G21350.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-28
Identity = 98/244 (40.16%), Postives = 135/244 (55.33%), Query Frame = 0

Query: 1   MGASIMSSRPHLIHSLLLRSVPFSSSSSTTAAALSTGCFRQFRPNSSIFLIRRSPHRFRD 60
           M  +  S+  +LIH LL    P      T+   L        RP S   L R+S H    
Sbjct: 1   MATAKSSTLTNLIHHLLRHRKP------TSPVCLF------LRPFSVSLLGRKSSHH--- 60

Query: 61  FAPSASVSVAQSFSSALSCPSEVEFNEEDDEIEDEDDSDYEGEVRIVDFELEEESIGGES 120
              S+S+ + + + S         F+  D+  +DED+         V        I  + 
Sbjct: 61  AWISSSLPLPRPYISFSPLLVPKSFSSVDESEQDEDN---------VSLVASLNEINDDG 120

Query: 121 QADAVSQLSSSVVNGSEVKNLPSLTVKEKKELASYAHSLGKKLKTQLVGKSGVTPGLAIS 180
           Q D  S+L+   +  +   +   L+ KEK++LASYAH LG KLK+QLVGKSGVT  + +S
Sbjct: 121 QEDG-SELTMVSMRENRRSSALELSAKEKRKLASYAHHLGDKLKSQLVGKSGVTDSVVLS 180

Query: 181 FVETLEANELLKIKILRNCPVELDDAVRQLEESTGSVVVSQIGRTVIIYRPSISKMKAEE 240
           FVETLE NELLK+KI R CP EL+D + +LEE+TGSV V QI RTVI+YRPS +K+KA+E
Sbjct: 181 FVETLEKNELLKVKIHRTCPGELEDMILRLEEATGSVSVGQIARTVILYRPSPTKLKADE 219

Query: 241 KKRQ 245
            K++
Sbjct: 241 DKKR 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P544541.1e-0735.42Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN... [more]
P0AGK68.4e-0532.22RNA-binding protein YhbY OS=Escherichia coli O157:H7 OX=83334 GN=yhbY PE=4 SV=1[more]
P0AGK58.4e-0532.22RNA-binding protein YhbY OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 ... [more]
P0AGK48.4e-0532.22RNA-binding protein YhbY OS=Escherichia coli (strain K12) OX=83333 GN=yhbY PE=1 ... [more]
Match NameE-valueIdentityDescription
XP_022971306.11.79e-11972.47uncharacterized protein LOC111470060 [Cucurbita maxima][more]
KAG6588422.15.10e-11972.13hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023529380.12.54e-11871.33uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo][more]
XP_022135882.15.03e-117100.00uncharacterized protein LOC111007723 [Momordica charantia][more]
XP_008448058.13.51e-11267.36PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1I2Z38.65e-12072.47uncharacterized protein LOC111470060 OS=Cucurbita maxima OX=3661 GN=LOC111470060... [more]
A0A6J1C4092.43e-117100.00uncharacterized protein LOC111007723 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A1S3BJF71.70e-11267.36uncharacterized protein LOC103490350 OS=Cucumis melo OX=3656 GN=LOC103490350 PE=... [more]
A0A0A0K2C31.66e-11166.43CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G004710 PE=4 SV... [more]
A0A5D3DFJ11.69e-7778.53Putative RNA-binding CRS1 / YhbY domain protein OS=Cucumis melo var. makuwa OX=1... [more]
Match NameE-valueIdentityDescription
AT4G39040.12.1e-3542.11RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT4G39040.22.7e-3544.24RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT2G21350.11.5e-2840.16RNA-binding CRS1 / YhbY (CRM) domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 144..230
e-value: 8.1E-24
score: 95.1
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 144..230
e-value: 2.9E-15
score: 56.2
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 142..241
score: 16.94384
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 143..244
e-value: 4.0E-27
score: 96.1
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 143..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..283
NoneNo IPR availablePANTHERPTHR47714:SF1CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 4..283
NoneNo IPR availablePANTHERPTHR47714CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 4..283

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g0443.1MC04g0443.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding