MC04g0425 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0425
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	auxin-responsive protein SAUR50-like
Location	MC04: 3397860 .. 3398054 (+)
RNA-Seq Expression	MC04g0425
Synteny	MC04g0425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCCGAAGGGGCACTTCGCCGTCTACGTCGGGGAGAATCGGAGCCGACATGTCGTCCCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGAGGAGGAGTTCGGCTTCCACCACCACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAA

mRNA sequence

GTTCCGAAGGGGCACTTCGCCGTCTACGTCGGGGAGAATCGGAGCCGACATGTCGTCCCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGAGGAGGAGTTCGGCTTCCACCACCACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAA

Coding sequence (CDS)

GTTCCGAAGGGGCACTTCGCCGTCTACGTCGGGGAGAATCGGAGCCGACATGTCGTCCCGATCTCGCTGCTGACTCACCCCGATTTCCAGTGCCTCCTCCGCCTCGCCGAGGAGGAGTTCGGCTTCCACCACCACATGGGCCTCACCATCCCCTGTGAAGAACTCGTTTTCCGCTCTCTCACCGCCGCCCTCAAA

Protein sequence

VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSLTAALK

Homology

[Close]

BLAST of MC04g0425 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 5.4e-24
Identity = 48/65 (73.85%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHF VYVGENRSR++VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+ELVF++L
Sbjct: 43  VPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTL 102

Query: 61  TAALK 66
           T+ ++
Sbjct: 103 TSMIR 107

[Close]

BLAST of MC04g0425 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-21
Identity = 46/65 (70.77%), Postives = 53/65 (81.54%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHF VYVG NRSR++VPIS L H +FQ LLRLAEEEFGF H MGLTIPC+E+ FRSL
Sbjct: 48  VPKGHFPVYVGPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSL 107

Query: 61  TAALK 66
            +  +
Sbjct: 108 ISMFR 112

[Close]

BLAST of MC04g0425 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.5e-18
Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 1  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRS 60
          VPKGHF VYVGE R+R++VPIS L HP FQ LL+ +EEEFGF+H MG+ IPC+E+ F S
Sbjct: 39 VPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLS 97

[Close]

BLAST of MC04g0425 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.7e-14
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 2  PKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEELVFRSL 61
          PKG+ AVYVGE   R V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +
Sbjct: 18 PKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCI 77

Query: 62 TAAL 65
          T+ L
Sbjct: 78 TSCL 81

[Close]

BLAST of MC04g0425 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-14
Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 2  PKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEELVFRSL 61
          PKG+ AVYVGE   R V+P+S +  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +
Sbjct: 18 PKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77

Query: 62 TAAL 65
          T  L
Sbjct: 78 TCCL 81

[Close]

BLAST of MC04g0425 vs. NCBI nr
Match: XP_022952665.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata])

HSP 1 Score: 139 bits (350), Expect = 4.09e-41
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
          VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSL
Sbjct: 35 VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL 94

Query: 61 TAALK 65
          TAALK
Sbjct: 95 TAALK 99

[Close]

BLAST of MC04g0425 vs. NCBI nr
Match: XP_038887253.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 139 bits (350), Expect = 4.22e-41
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSL
Sbjct: 36  VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL 95

Query: 61  TAALK 65
           TAALK
Sbjct: 96  TAALK 100

[Close]

BLAST of MC04g0425 vs. NCBI nr
Match: KAG6588978.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139 bits (350), Expect = 4.34e-41
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSL
Sbjct: 37  VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL 96

Query: 61  TAALK 65
           TAALK
Sbjct: 97  TAALK 101

[Close]

BLAST of MC04g0425 vs. NCBI nr
Match: XP_022989149.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 139 bits (350), Expect = 5.06e-41
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSL
Sbjct: 42  VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL 101

Query: 61  TAALK 65
           TAALK
Sbjct: 102 TAALK 106

[Close]

BLAST of MC04g0425 vs. NCBI nr
Match: XP_022969389.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_022975693.1 auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 138 bits (347), Expect = 1.17e-40
Identity = 62/65 (95.38%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
          VPKGHFAVYVG+NRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSL
Sbjct: 35 VPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL 94

Query: 61 TAALK 65
          TAALK
Sbjct: 95 TAALK 99

[Close]

BLAST of MC04g0425 vs. ExPASy TrEMBL
Match: A0A6J1GME7 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111455291 PE=3 SV=1)

HSP 1 Score: 139 bits (350), Expect = 1.98e-41
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
          VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSL
Sbjct: 35 VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL 94

Query: 61 TAALK 65
          TAALK
Sbjct: 95 TAALK 99

[Close]

BLAST of MC04g0425 vs. ExPASy TrEMBL
Match: A0A6J1JNJ6 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111486307 PE=3 SV=1)

HSP 1 Score: 139 bits (350), Expect = 2.45e-41
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSL
Sbjct: 42  VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL 101

Query: 61  TAALK 65
           TAALK
Sbjct: 102 TAALK 106

[Close]

BLAST of MC04g0425 vs. ExPASy TrEMBL
Match: A0A6J1I2G2 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411 PE=3 SV=1)

HSP 1 Score: 138 bits (347), Expect = 5.68e-41
Identity = 62/65 (95.38%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
          VPKGHFAVYVG+NRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSL
Sbjct: 35 VPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL 94

Query: 61 TAALK 65
          TAALK
Sbjct: 95 TAALK 99

[Close]

BLAST of MC04g0425 vs. ExPASy TrEMBL
Match: A0A6J1EKI0 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111435304 PE=3 SV=1)

HSP 1 Score: 137 bits (346), Expect = 2.34e-40
Identity = 62/65 (95.38%), Postives = 65/65 (100.00%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHFAVYVGENRSR+VVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEE+VFRSL
Sbjct: 70  VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSL 129

Query: 61  TAALK 65
           TAAL+
Sbjct: 130 TAALQ 134

[Close]

BLAST of MC04g0425 vs. ExPASy TrEMBL
Match: A0A0A0K5S8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1)

HSP 1 Score: 135 bits (339), Expect = 9.43e-40
Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 1  VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
          VPKGHFAVYVG+NRSR+VVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEE+VFRSL
Sbjct: 35 VPKGHFAVYVGQNRSRYVVPISLLTHPDFQCLLRLAEEEFGFRHHMGLTIPCEEVVFRSL 94

Query: 61 TAALK 65
          TAALK
Sbjct: 95 TAALK 99

[Close]

BLAST of MC04g0425 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 3.8e-25
Identity = 48/65 (73.85%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHF VYVGENRSR++VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+ELVF++L
Sbjct: 43  VPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTL 102

Query: 61  TAALK 66
           T+ ++
Sbjct: 103 TSMIR 107

[Close]

BLAST of MC04g0425 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 8.5e-25
Identity = 50/65 (76.92%), Postives = 56/65 (86.15%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHF VYVGENR R+VVPIS LT P+FQ LL+ AEEEFGF H MGLTIPCEE+VFRSL
Sbjct: 44  VPKGHFVVYVGENRVRYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSL 103

Query: 61  TAALK 66
           T+ L+
Sbjct: 104 TSMLR 108

[Close]

BLAST of MC04g0425 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 2.5e-24
Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHF VYVGE RSR++VPIS LTHP F+ LL+ AEEEFGF+H MGLTIPCEE+VFRSL
Sbjct: 40  VPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSL 99

Query: 61  TAAL 65
           T+ +
Sbjct: 100 TSMI 103

[Close]

BLAST of MC04g0425 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.1 bits (266), Expect = 5.5e-24
Identity = 47/65 (72.31%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHF VYVG NRSR++VPIS LT+ DFQCLLR AEEEFGF H MGLTIPC+EL F+ L
Sbjct: 44  VPKGHFPVYVGHNRSRYIVPISFLTNLDFQCLLRRAEEEFGFDHDMGLTIPCDELFFQDL 103

Query: 61  TAALK 66
           T+ ++
Sbjct: 104 TSMIR 108

[Close]

BLAST of MC04g0425 vs. TAIR 10
Match: AT4G36110.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.2 bits (256), Expect = 8.0e-23
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 1   VPKGHFAVYVGENRSRHVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEELVFRSL 60
           VPKGHF VYVG++RSR+VVPIS L H +FQ LL+LAEEEFGF H MGLTIPC+E+VFRSL
Sbjct: 40  VPKGHFPVYVGQHRSRYVVPISWLDHHEFQSLLQLAEEEFGFEHEMGLTIPCDEVVFRSL 99

Query: 61  TAALK 66
            +  +
Sbjct: 100 ISMFR 104

The following BLAST results are available for this feature:

BLAST of MC04g0425 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	5.4e-24	73.85	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	1.9e-21	70.77	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	7.5e-18	66.10	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33081	1.7e-14	59.38	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33082	2.3e-14	57.81	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of MC04g0425 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952665.1	4.09e-41	96.92	auxin-responsive protein SAUR50-like [Cucurbita moschata]	[more]
XP_038887253.1	4.22e-41	96.92	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
KAG6588978.1	4.34e-41	96.92	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022989149.1	5.06e-41	96.92	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
XP_022969389.1	1.17e-40	95.38	auxin-responsive protein SAUR50-like [Cucurbita maxima] >XP_022975693.1 auxin-re...	[more]

BLAST of MC04g0425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GME7	1.98e-41	96.92	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A6J1JNJ6	2.45e-41	96.92	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111486307...	[more]
A0A6J1I2G2	5.68e-41	95.38	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111468411...	[more]
A0A6J1EKI0	2.34e-40	95.38	auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114353...	[more]
A0A0A0K5S8	9.43e-40	93.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008430 PE=3 SV=1	[more]

BLAST of MC04g0425 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34760.1	3.8e-25	73.85	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	8.5e-25	76.92	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	2.5e-24	75.00	SAUR-like auxin-responsive protein family	[more]
AT2G16580.1	5.5e-24	72.31	SAUR-like auxin-responsive protein family	[more]
AT4G36110.1	8.0e-23	70.77	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 1..63 e-value: 5.0E-25 score: 87.5
None	No IPR available	PANTHER	PTHR31374:SF311	SMALL AUXIN-UP RNA-RELATED	coord: 1..64
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0425.1	MC04g0425.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin