
MC04g0388 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.ATTTGATTCATATAGTTTTAAAAGTTTAAATTTAGCCTCTATAATTTTGAAAATTTCATCTAACACATTGACTTGGGTGTTTTGTACCCAAATTATAGGGAAGAAATAACCCACCACCACCCATGTGAGCTTTCTGCTGACTGACCACTATATAAGTCACTGGCATTGAGCTTTCTCCAGACTTTTTGGTGAGGATGAAAAAAATTCTCCTTTCATTATTAGCCATAAAAGCAACATTTAAAAATAGTGTAGGATCCATAAAATAAAAACAATATATTATTATCAAAACGTAAATGAAAATTGTAAAAATTTTCCTTATGATAAATAGTGTCCCACGCAGAAACGGAATCGCGTGGAAGCGAAACGACATCCCAAAAGTGCACTATTTAAAGGAAACCCCTCCGTTCTTCTCTTATTTCCCGTTTCTTCGCTTCCGAAATCTTCCAAATCGTCGCGCCTTAGGGTTTCCTTTTTTTCCTCCCAATTCCGATTCCCCAACCGGAGACAATGTCGTCGTCGAAGAAGATCGTCCTCAAGAGTTCCGACGGCGAAACTTTCGAGGTCGAGGAAGCCGTGGCGGTCGAGTCGCAGACCATCAAGCACATGATTGAGGACGATTGCGCCGATAATGTCATTCCCTTGCCCAATGTTAACAGTGCCATCCTCGCCAAGGTAATTGAGTATTGTAAGAAGCATGTCGAGACTGATGATAAGGATTCTAAAGCCGTCGATGATAGTCTCAAGACCTGGGATGCTGAATATGTCAAGGTTGATCAGAATACCCTATTTGATCTCATCCTGGTCAGTTTTTCTTTTCCCTTCTCTGTTTATGTTCATGATTCTCTTTATTTCTCCCCTGATTTTAAAAATTTTCATCTCCTTTCCGTGTGATTGTCTTGGAATGTAGGGAGTTGCTTTAGTTGTCGAGTTTCTTGTATGTTGGGGCTTTTAGATTATCTGTAGCATGCTATCCAAAGCTGTTATTGAGGGATTCATGTCTATTTCGTTGTTTTTTCTTGCGATTATGTTGACCCTTTTGCTCCATCCTTGGAATTCGATTTTGCTTCTTCTTTTTTTTTTGAAATCCCGTGTGTCGGGGCCAGCTTGCTCGCACCACTAACTAACTACATTTGGTTGAGAAAGGTAACTCCTAGGATATTAAATCCTAAGAAGGTGTCCACCATGGTTTGAACTCATTCCCTCCAAGTACTTTATACAAAGGCCCTCAAGTCCTATGACGGTTAATTCGATTTTGCTTCCTTGTTAGGCAAAACTTACAATTGAGGATTACTATGAATTAGTGACTTAGTATATCATCATGTATATTTGGTATGCTATATAATTACAATTGACTGTTTATTCTAGCATGATTTAGTCCTAATGGACCATTCCCGTATGCATTCTTTTATTGATTCAATTAACACACCTTGAATTTACTTTTAGTTGCCTTTAAAGTGGAAGATTATTAGGTCGGGTTCGGGATGACTTTTTGAACGTGAAAAGTGCTTTGAGCCCTTTAAAAACTTTTCTTTTTCTTTTCCTTAGAAATTTTCATAGTGTTTGTTCAGTTAATCAAAAGTGATTTTGAACAATTTGTAAAGGTCCTTTAGCTTTTAGGAAAAGCACCAGTGCTTCTTTCAAAAGTGAAGTTAAGTATACTAGACGATCTTATCAATTTGGTTCTCTTTTTACCATCTGGGCATGTTCTGGTTGCCACCCAAATACGCATCACAAGATTTCTGAACAGACTTTATTGTTAATTTCCCAGTTTTCAAATTATATCCAGTTAAATTACTGTCTATTGCATGAACTTTATTCTCTCTGGGTCTTTTCTTTGCTCTGCTTGTGAGTAATGGATATGCATTTTCTTCCCCCCAATTCAGGCAGCTAATTATTTGAACATCAAGGGCCTGCTGGATCTGACCTGCCAGACCGTGGCCGACATGATCAAGGGAAAGACTCCAGAGGAAATTCGAAAGACATTCAATATCAAGAATGATTTCACTCCAGAGGAGGAAGAGGAGGTTCGAAGGGAGAATCAATGGGCCTTTGAGTGAAGTCTGAAGATTGATTTAATTAACTGGTTTAGTAGTAATGTCTATACAGTTTAGGGACTTGGCGTTTTAGTTTTTGGGATGCTTATTTAGGCTTCCATCTCTCTGTTTTTCTATTCCCTTTTCTTGAGAATTTATCTTAGATTAATATATAGTCTTTCTAAAATCTAATGACAAAAGAGGATTGCATATATAAAGTTTCTTGAATCATTCTTTT ATTTGATTCATATAGTTTTAAAAGTTTAAATTTAGCCTCTATAATTTTGAAAATTTCATCTAACACATTGACTTGGGTGTTTTGTACCCAAATTATAGGGAAGAAATAACCCACCACCACCCATGTGAGCTTTCTGCTGACTGACCACTATATAAGTCACTGGCATTGAGCTTTCTCCAGACTTTTTGAAACGGAATCGCGTGGAAGCGAAACGACATCCCAAAAGTGCACTATTTAAAGGAAACCCCTCCGTTCTTCTCTTATTTCCCGTTTCTTCGCTTCCGAAATCTTCCAAATCGTCGCGCCTTAGGGTTTCCTTTTTTTCCTCCCAATTCCGATTCCCCAACCGGAGACAATGTCGTCGTCGAAGAAGATCGTCCTCAAGAGTTCCGACGGCGAAACTTTCGAGGTCGAGGAAGCCGTGGCGGTCGAGTCGCAGACCATCAAGCACATGATTGAGGACGATTGCGCCGATAATGTCATTCCCTTGCCCAATGTTAACAGTGCCATCCTCGCCAAGGTAATTGAGTATTGTAAGAAGCATGTCGAGACTGATGATAAGGATTCTAAAGCCGTCGATGATAGTCTCAAGACCTGGGATGCTGAATATGTCAAGGTTGATCAGAATACCCTATTTGATCTCATCCTGGCAGCTAATTATTTGAACATCAAGGGCCTGCTGGATCTGACCTGCCAGACCGTGGCCGACATGATCAAGGGAAAGACTCCAGAGGAAATTCGAAAGACATTCAATATCAAGAATGATTTCACTCCAGAGGAGGAAGAGGAGGTTCGAAGGGAGAATCAATGGGCCTTTGAGTGAAGTCTGAAGATTGATTTAATTAACTGGTTTAGTAGTAATGTCTATACAGTTTAGGGACTTGGCGTTTTAGTTTTTGGGATGCTTATTTAGGCTTCCATCTCTCTGTTTTTCTATTCCCTTTTCTTGAGAATTTATCTTAGATTAATATATAGTCTTTCTAAAATCTAATGACAAAAGAGGATTGCATATATAAAGTTTCTTGAATCATTCTTTT ATGTCGTCGTCGAAGAAGATCGTCCTCAAGAGTTCCGACGGCGAAACTTTCGAGGTCGAGGAAGCCGTGGCGGTCGAGTCGCAGACCATCAAGCACATGATTGAGGACGATTGCGCCGATAATGTCATTCCCTTGCCCAATGTTAACAGTGCCATCCTCGCCAAGGTAATTGAGTATTGTAAGAAGCATGTCGAGACTGATGATAAGGATTCTAAAGCCGTCGATGATAGTCTCAAGACCTGGGATGCTGAATATGTCAAGGTTGATCAGAATACCCTATTTGATCTCATCCTGGCAGCTAATTATTTGAACATCAAGGGCCTGCTGGATCTGACCTGCCAGACCGTGGCCGACATGATCAAGGGAAAGACTCCAGAGGAAATTCGAAAGACATTCAATATCAAGAATGATTTCACTCCAGAGGAGGAAGAGGAGGTTCGAAGGGAGAATCAATGGGCCTTTGAGTGA MSSSKKIVLKSSDGETFEVEEAVAVESQTIKHMIEDDCADNVIPLPNVNSAILAKVIEYCKKHVETDDKDSKAVDDSLKTWDAEYVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE Homology
BLAST of MC04g0388 vs. ExPASy Swiss-Prot
Match: Q9FHW7 (SKP1-like protein 1B OS=Arabidopsis thaliana OX=3702 GN=SKP1B PE=1 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 6.7e-65 Identity = 128/171 (74.85%), Postives = 141/171 (82.46%), Query Frame = 0
BLAST of MC04g0388 vs. ExPASy Swiss-Prot
Match: Q39255 (SKP1-like protein 1A OS=Arabidopsis thaliana OX=3702 GN=SKP1A PE=1 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 7.4e-64 Identity = 125/159 (78.62%), Postives = 138/159 (86.79%), Query Frame = 0
BLAST of MC04g0388 vs. ExPASy Swiss-Prot
Match: Q6PL11 (SKP1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP1 PE=1 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.1e-62 Identity = 129/166 (77.71%), Postives = 136/166 (81.93%), Query Frame = 0
BLAST of MC04g0388 vs. ExPASy Swiss-Prot
Match: Q651E8 (SKP1-like protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=SKP20 PE=1 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 1.5e-59 Identity = 123/165 (74.55%), Postives = 136/165 (82.42%), Query Frame = 0
BLAST of MC04g0388 vs. ExPASy Swiss-Prot
Match: Q9LNT9 (SKP1-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=ASK4 PE=1 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.2e-58 Identity = 118/160 (73.75%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of MC04g0388 vs. NCBI nr
Match: XP_022135870.1 (SKP1-like protein 1B [Momordica charantia]) HSP 1 Score: 303 bits (777), Expect = 7.98e-104 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of MC04g0388 vs. NCBI nr
Match: XP_004144851.1 (SKP1-like protein 1B [Cucumis sativus]) HSP 1 Score: 283 bits (724), Expect = 9.64e-96 Identity = 142/155 (91.61%), Postives = 149/155 (96.13%), Query Frame = 0
BLAST of MC04g0388 vs. NCBI nr
Match: XP_008447950.1 (PREDICTED: SKP1-like protein 1B [Cucumis melo] >KAA0049758.1 SKP1-like protein 1B [Cucumis melo var. makuwa] >TYK12120.1 SKP1-like protein 1B [Cucumis melo var. makuwa]) HSP 1 Score: 281 bits (719), Expect = 5.58e-95 Identity = 140/155 (90.32%), Postives = 148/155 (95.48%), Query Frame = 0
BLAST of MC04g0388 vs. NCBI nr
Match: KAG7015279.1 (SKP1-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 268 bits (686), Expect = 5.99e-90 Identity = 135/155 (87.10%), Postives = 145/155 (93.55%), Query Frame = 0
BLAST of MC04g0388 vs. NCBI nr
Match: XP_023529806.1 (SKP1-like protein 1A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268 bits (684), Expect = 1.21e-89 Identity = 134/155 (86.45%), Postives = 145/155 (93.55%), Query Frame = 0
BLAST of MC04g0388 vs. ExPASy TrEMBL
Match: A0A6J1C297 (SKP1-like protein OS=Momordica charantia OX=3673 GN=LOC111007712 PE=3 SV=1) HSP 1 Score: 303 bits (777), Expect = 3.86e-104 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of MC04g0388 vs. ExPASy TrEMBL
Match: A0A0A0K4P4 (SKP1-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G012950 PE=3 SV=1) HSP 1 Score: 283 bits (724), Expect = 4.67e-96 Identity = 142/155 (91.61%), Postives = 149/155 (96.13%), Query Frame = 0
BLAST of MC04g0388 vs. ExPASy TrEMBL
Match: A0A5A7U3D8 (SKP1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00540 PE=3 SV=1) HSP 1 Score: 281 bits (719), Expect = 2.70e-95 Identity = 140/155 (90.32%), Postives = 148/155 (95.48%), Query Frame = 0
BLAST of MC04g0388 vs. ExPASy TrEMBL
Match: A0A1S3BI15 (SKP1-like protein OS=Cucumis melo OX=3656 GN=LOC103490282 PE=3 SV=1) HSP 1 Score: 281 bits (719), Expect = 2.70e-95 Identity = 140/155 (90.32%), Postives = 148/155 (95.48%), Query Frame = 0
BLAST of MC04g0388 vs. ExPASy TrEMBL
Match: A0A6J1EKE0 (SKP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435156 PE=3 SV=1) HSP 1 Score: 268 bits (684), Expect = 5.86e-90 Identity = 134/155 (86.45%), Postives = 146/155 (94.19%), Query Frame = 0
BLAST of MC04g0388 vs. TAIR 10
Match: AT5G42190.1 (E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein ) HSP 1 Score: 248.1 bits (632), Expect = 4.8e-66 Identity = 128/171 (74.85%), Postives = 141/171 (82.46%), Query Frame = 0
BLAST of MC04g0388 vs. TAIR 10
Match: AT1G75950.1 (S phase kinase-associated protein 1 ) HSP 1 Score: 244.6 bits (623), Expect = 5.3e-65 Identity = 125/159 (78.62%), Postives = 138/159 (86.79%), Query Frame = 0
BLAST of MC04g0388 vs. TAIR 10
Match: AT1G20140.1 (SKP1-like 4 ) HSP 1 Score: 227.3 bits (578), Expect = 8.7e-60 Identity = 118/160 (73.75%), Postives = 133/160 (83.12%), Query Frame = 0
BLAST of MC04g0388 vs. TAIR 10
Match: AT2G25700.1 (SKP1-like 3 ) HSP 1 Score: 217.2 bits (552), Expect = 9.0e-57 Identity = 113/160 (70.62%), Postives = 128/160 (80.00%), Query Frame = 0
BLAST of MC04g0388 vs. TAIR 10
Match: AT4G34210.1 (SKP1-like 11 ) HSP 1 Score: 210.3 bits (534), Expect = 1.1e-54 Identity = 107/153 (69.93%), Postives = 127/153 (83.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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