MC04g0385 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0385
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Trafficking protein particle complex subunit
Location	MC04: 3070549 .. 3074028 (-)
RNA-Seq Expression	MC04g0385
Synteny	MC04g0385

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACTTGTATTTAACAAAACTCAATCATCTACTAGGCCACGTAGGGGTAAGATAGCCATTTTCTCGAGGAAGATTTTTCTTTTTCTTTTAATTTTTCTTCACCCCTTTTGGAAGATCCGACCTTCTTCGCGGCAACGCAACCGTGAAATTCGCATTGCCCGAGTGGCCCAATCCCGCAGAAGAAAAACCCGCCGCCGTCGAAGATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGGTGCGACCTCCACGAACACCATATTTTATGGAACCCAAAGAAATTTCATATATGTTAATAAGAAAAGATTTGTGATCCTTTTTCGATTCGGCCGGAGCAAACAGAACAACCCGCTGTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCATCACATTGTCCATTGTTCGCTGGATGTCATCGAAGAGCGAGGTAGATTTCTTGTTTGCCTTAGTGTTTCATTGCTTGTAATTAATTGTATTTTTCACGAAGTTGAAGGACGATCAGATCTAGGAACGGCGCCTGGTGTTGCACTCAGTTAGTAGGGTTTATGATTTGGATATGTTTTTGCGATAATTTCCAAGCTTCAATAAGTTTAAGTGTCTTCCGGACCTAGCTAAAGTCTTCCCTCTGATATTGTCTATGGTGTTGCTGCCAGTGAACAATCCGAGAAAATCTGGACCAACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTATAAAGTGTGAGTATCATTGTTTCTGTGGACAAAGCAGTGTGGGCTATTTCCACATCAAGTAGGATCAGAATGTGTTCTTTTCAGTTTCTATTGGAGTGGATCTTAAATGATTCTGTATGATTGAAATCATGTCCAGGTATGGCTATTTGACTAATACCAAAGTGAAGTTTATTGTGGTGACCACAGATCTAGATGTCAGAGATGCCGATGTGAGAAGTGTGAGTACATTGTGAATTTGCAATTACGATAATCAAACTTTCTACAGTAGTACAGATCTTTAATTTTTCTATGTGAACTGTTACTTTTAGGTAACTCTGAAGATGAAAATTTTCAGGGTGTTGTCTATCTGTGAAGATGTTAGTGATACAAACATTTAAATGAGTTCCTCCTCTTATTCAGTTGTCTTTTACAAATTTTTCTTTCGACGATAAGGTGTAACCTTTCTCAAGCTAGCTGCTTTAGTAGTGATGTAAACGTGACATATTCCTAGGGAGGATTCCTATCATAAATGTTTATTCTTCCTTCACGGCCAGCTGAAACCATGATTGATATCCATTGGTATCTCAAACAAGCTTCTCATGCTCGAAATCCACATGCCTTTTGATCTCTAAATATGCATCATAGCAATAGGATATGAAGATGAGACATTTCAGGGTATTGCCACTGTCAAGATGTTTGTGGTGCAGACACCATAATATCTCCGTGTATTCAGTCTTCACATTTCTGCTTTCAATGATAAAACTCCTAACAGGGTAGCTGTTTTACTAAGATACTGATGTGAACATGACAGATTCTGGAGAGGTGCACTACCATTAATATTTATTCTCCCTTCACAACCAGCTGAAACCAGAATTGATGTCCATTGAAATCTCAGATATGCTTCTTAGAACACAACATATCAACAGAATATCAGAATAGTGTGCAATCATTGATTTTTGTCTTTTCTTCAAATACTAAGAAAGCATCGTTGTCTCTGATCATTTGCACTATATTCAAGTGTTGCTTGATTTTTCTTAAACAACCCTTGCTCCTTTAGAGAGCTTTGGTTCATGAATTTGATATGTTTGAGCTTGCATAGTTTGGATTAGGCAGTCTAGTATTGTGTGCCTCTGTTTGGATTGTGAGAACTGACCTTAGGAAGTTTGATAATTTGTATAGCTTATGTAGATGAGCTTTTAGAAGTACGAGTTTATGTAGTCTATGGAACTTGCAATCTTAGGATAAGCAAACACATATACCATAGCCAGGTTCAACTTCTCTGTAGTTTTGTAAGAATCTAACTGTTTGTGTGAAAACCGATGACCTTCTAAGGTGAGCATATAACCTACAAAAGAGAGAAAGCAAGTTGTGACGCTCAATTTGGTACTATCCAAGTTGTTTTCTAGACGAGCAATCAGTCACACATACCTGGATACATAGACAAGTTTCCAATTTATACCGTCGACAAGTGGGGTCCACTTAGTGGTTATCAAACACTACCGTGGGCATTCCAACATACGTTCCTCAATAGTGGAGTGATGGTGATAGAACCCAAACACTAAAGATATATTGAAATATAAAAAATATAACTACAATAACTACCAAGTAATTCGAGGTACTTGGATCCTCCTCCCTCTCTTGAGTATTCTTACTCTCGCCCAAACCATACTAACCAGTAACTGATTGTCTACTTTCATTCTTACCCCCTCACTGTATTTATAGTCAAACCCCAATCCAATTACTAATATACCCTTGATGCCCCAATAATAACCCTAATCGATCCTATGGATAGCAATCCTATCAGATGGTTGATTGAAGTTTACTTCAAAATACCTCGGCTCGGCCTTGGCTATTGCTGAGATCATGTTGGGTTCATGTTGAGGTCCAAGGTATTATTCCTCGACCTCTCCCAGTTCTCTCCTCTTCTGCCATGTGGAGCAGAGTCCGTAAGGTCTTACGCTATCCAACACTAGCCATAAGCCAAAATGCCCTCTTAGTTAGCTTTGTAAGAATCTACTTCCCAAGTGAGATCACTTTGTTCTCGTAATACATTCACTCTTTTTTCTGTCATACTTTATATTGTCTGCAATCATCAATTCTTTTGAAAAAGAATCACAAATTTAGGCAATTTTTGGTTCTGCCTTGCGCATTTATACACTATGTTGCATACACACAAACTCTATAATATGACATCTGATGTATTCCTCAAAATTTTCCAGTTTTTCAGGAGATTTCATGCTGCATACGTGGATGCAGTTTCAAATCCATTTCACGTGCCAGGTAAGAAAATTACTTCCAAAACTTTTGCAGAAAGTGTGAGCACCATCGTCAAGTCGTTTGGGTTCAGTTCAGCTGTTTGAGTGACCCACCAGGCAACCACTGACGTGTAGAACTGAAATTTTAATACCAAGTCTGAAGTCATCGACTGCCACACTTCATTTACTGCTGCGTCGACTCATCTTTCTTCTTGTTCTGGAAATATTTGAAATATTTTTTCTTGAGCTGTACTATGAAAGATGAAACCAACGGCTGTGCCTTTTTTCTCCTTTTTTCCTAGTTTTTCGAAAAACGATCCAACTTTTTTTATTGACATTTACTGTTTCTTTTTTATGATATTGTAACATGAGGATGTCAATAATTGGATTTTGTTTGCCAATGATCAATCTTATTAAAATATCATGAATCGATTCATAGAATTGAATAGTATTGTGGTCTTATAGAACGATAATTACTTAAATACTTCCATATTGCTAGAAAAGTAAAA

mRNA sequence

TAAACTTGTATTTAACAAAACTCAATCATCTACTAGGCCACGTAGGGGTAAGATAGCCATTTTCTCGAGGAAGATTTTTCTTTTTCTTTTAATTTTTCTTCACCCCTTTTGGAAGATCCGACCTTCTTCGCGGCAACGCAACCGTGAAATTCGCATTGCCCGAGTGGCCCAATCCCGCAGAAGAAAAACCCGCCGCCGTCGAAGATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGAACAACCCGCTGTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCATCACATTGTCCATTGTTCGCTGGATGTCATCGAAGAGCGAGTGAACAATCCGAGAAAATCTGGACCAACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTATAAAGTGTATGGCTATTTGACTAATACCAAAGTGAAGTTTATTGTGGTGACCACAGATCTAGATGTCAGAGATGCCGATGTGAGAAGTTTTTTCAGGAGATTTCATGCTGCATACGTGGATGCAGTTTCAAATCCATTTCACGTGCCAGGTAAGAAAATTACTTCCAAAACTTTTGCAGAAAGTGTGAGCACCATCGTCAAGTCGTTTGGGTTCAGTTCAGCTGTTTGAGTGACCCACCAGGCAACCACTGACGTGTAGAACTGAAATTTTAATACCAAGTCTGAAGTCATCGACTGCCACACTTCATTTACTGCTGCGTCGACTCATCTTTCTTCTTGTTCTGGAAATATTTGAAATATTTTTTCTTGAGCTGTACTATGAAAGATGAAACCAACGGCTGTGCCTTTTTTCTCCTTTTTTCCTAGTTTTTCGAAAAACGATCCAACTTTTTTTATTGACATTTACTGTTTCTTTTTTATGATATTGTAACATGAGGATGTCAATAATTGGATTTTGTTTGCCAATGATCAATCTTATTAAAATATCATGAATCGATTCATAGAATTGAATAGTATTGTGGTCTTATAGAACGATAATTACTTAAATACTTCCATATTGCTAGAAAAGTAAAA

Coding sequence (CDS)

ATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGAACAACCCGCTGTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCATCACATTGTCCATTGTTCGCTGGATGTCATCGAAGAGCGAGTGAACAATCCGAGAAAATCTGGACCAACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTATAAAGTGTATGGCTATTTGACTAATACCAAAGTGAAGTTTATTGTGGTGACCACAGATCTAGATGTCAGAGATGCCGATGTGAGAAGTTTTTTCAGGAGATTTCATGCTGCATACGTGGATGCAGTTTCAAATCCATTTCACGTGCCAGGTAAGAAAATTACTTCCAAAACTTTTGCAGAAAGTGTGAGCACCATCGTCAAGTCGTTTGGGTTCAGTTCAGCTGTTTGA

Protein sequence

MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAV

Homology

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BLAST of MC04g0385 vs. ExPASy Swiss-Prot
Match: Q54CU7 (Trafficking protein particle complex subunit 2-like protein OS=Dictyostelium discoideum OX=44689 GN=trappc2l PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.7e-35
Identity = 70/139 (50.36%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 2   IVCVAVVGHQNNPLYIQSFTEA---DDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETF 61
           IVCVA+VG  NNPL+IQ F+ +   ++ LKLH+IVHCSLD+IE++  + +K     ++ +
Sbjct: 4   IVCVAIVGKGNNPLFIQDFSSSITDENKLKLHYIVHCSLDIIEDKPGSNKK---LPSDMY 63

Query: 62  LGLLYPTENYKVYGYLTNTKVKFIVVTTDL-DVRDADVRSFFRRFHAAYVDAVSNPFHVP 121
           LGLLYPTE+YKVYGYLTNTK+KFI+V  D  D++D+D++ FF+R    +++  SNPF+ P
Sbjct: 64  LGLLYPTEDYKVYGYLTNTKIKFIIVVLDTSDIKDSDLKLFFKRLQTLFINTTSNPFYKP 123

Query: 122 GKKITSKTFAESVSTIVKS 137
             K+ SK F + V+ +V S
Sbjct: 124 NSKVESKKFLQEVTNLVPS 139

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BLAST of MC04g0385 vs. ExPASy Swiss-Prot
Match: Q5M8X5 (Trafficking protein particle complex subunit 2-like protein OS=Xenopus tropicalis OX=8364 GN=trappc2l PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.7e-31
Identity = 64/136 (47.06%), Postives = 98/136 (72.06%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           M VCVAV+  +N PLYI+S T  ++ LK H+ VH SLDV++E+++   K+     E +LG
Sbjct: 1   MAVCVAVIAKENYPLYIRS-TPTENQLKFHYTVHTSLDVVDEKISAMGKAVMDQRELYLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVV--TTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPG 120
           LLYPTE+YKVYGY+TN+KVKF++V  +++  +RD ++RS FR+ H +Y D + NPF+ PG
Sbjct: 61  LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTSLRDNEIRSMFRKLHNSYTDVMCNPFYNPG 120

Query: 121 KKITSKTFAESVSTIV 135
             I S+ F  +V++++
Sbjct: 121 DPIQSRAFDNTVTSMM 135

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BLAST of MC04g0385 vs. ExPASy Swiss-Prot
Match: B2RYU6 (Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-30
Identity = 63/136 (46.32%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           M VC+AV+  +N PLYI+S T  ++ LK H++VH SLDV++E+++   K+     E +LG
Sbjct: 1   MAVCIAVIAKENYPLYIRS-TPTENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVV--TTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPG 120
           LLYPTE+YKVYGY+TN+KVKF++V  +++  +RD ++RS FR+ H +Y D + NPF+ PG
Sbjct: 61  LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 120

Query: 121 KKITSKTFAESVSTIV 135
            +I S+ F   V++++
Sbjct: 121 DRIQSRAFDTMVTSMM 135

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BLAST of MC04g0385 vs. ExPASy Swiss-Prot
Match: Q9JME7 (Trafficking protein particle complex subunit 2-like protein OS=Mus musculus OX=10090 GN=Trappc2l PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30
Identity = 63/136 (46.32%), Postives = 98/136 (72.06%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           M VC+AV+  +N PLYI+S T  +  LK H++VH SLDV++E+++   K+     E +LG
Sbjct: 1   MAVCIAVIAKENYPLYIRS-TPTESELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVV--TTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPG 120
           LLYPTE+YKVYGY+TN+KVKF++V  +++  +RD ++RS FR+ H +Y D + NPF+ PG
Sbjct: 61  LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 120

Query: 121 KKITSKTFAESVSTIV 135
            +I S+ F   V++++
Sbjct: 121 DRIQSRAFDTMVTSMM 135

[Close]

BLAST of MC04g0385 vs. ExPASy Swiss-Prot
Match: B5XGE7 (Trafficking protein particle complex subunit 2-like protein OS=Salmo salar OX=8030 GN=trappc2l PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30
Identity = 64/136 (47.06%), Postives = 94/136 (69.12%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           M VC+AV+  +N PLYI+S     + LK H+ VH SLDV+EE+++   K+     E +LG
Sbjct: 1   MAVCIAVIAKENYPLYIRS-VPVQNELKFHYTVHTSLDVVEEKISAVGKAMADQRELYLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVV--TTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPG 120
           LLYPTE+YKVYGY+TN+KVKF++V  +++  +RD ++RS FR+ H ++ D + NPF+ PG
Sbjct: 61  LLYPTEDYKVYGYVTNSKVKFVIVVDSSNTSLRDNEIRSMFRKLHNSFTDVMCNPFYNPG 120

Query: 121 KKITSKTFAESVSTIV 135
             I SK F   VS ++
Sbjct: 121 DTIQSKAFDSMVSAMM 135

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BLAST of MC04g0385 vs. NCBI nr
Match: XP_022136317.1 (trafficking protein particle complex subunit 2-like protein [Momordica charantia])

HSP 1 Score: 288 bits (738), Expect = 2.87e-98
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 143
           ITSKTFAESVSTIVKSFGFSSAV
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAV 143

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BLAST of MC04g0385 vs. NCBI nr
Match: XP_004144858.1 (trafficking protein particle complex subunit 2-like protein [Cucumis sativus] >XP_008447943.1 PREDICTED: trafficking protein particle complex subunit 2-like protein [Cucumis melo] >XP_038887443.1 trafficking protein particle complex subunit 2-like protein [Benincasa hispida] >KGN43262.1 hypothetical protein Csa_020365 [Cucumis sativus])

HSP 1 Score: 285 bits (730), Expect = 4.76e-97
Identity = 139/143 (97.20%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 143
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of MC04g0385 vs. NCBI nr
Match: XP_022928280.1 (trafficking protein particle complex subunit 2-like protein [Cucurbita moschata] >XP_022989273.1 trafficking protein particle complex subunit 2-like protein [Cucurbita maxima] >XP_023529813.1 trafficking protein particle complex subunit 2-like protein [Cucurbita pepo subsp. pepo] >KAG7015283.1 Trafficking protein particle complex subunit 2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284 bits (727), Expect = 1.37e-96
Identity = 138/143 (96.50%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 143
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of MC04g0385 vs. NCBI nr
Match: XP_031127945.1 (trafficking protein particle complex subunit 2-like protein [Ipomoea triloba])

HSP 1 Score: 278 bits (712), Expect = 2.56e-94
Identity = 135/142 (95.07%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNP+KSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSA 142
           ITS+TFAESVSTIVKSFG SSA
Sbjct: 121 ITSRTFAESVSTIVKSFGLSSA 142

[Close]

BLAST of MC04g0385 vs. NCBI nr
Match: XP_023872854.1 (trafficking protein particle complex subunit 2-like protein [Quercus suber])

HSP 1 Score: 278 bits (710), Expect = 5.35e-94
Identity = 135/142 (95.07%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNP+KSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSA 142
           ITSKTFAE VSTIVKSFG SSA
Sbjct: 121 ITSKTFAERVSTIVKSFGLSSA 142

[Close]

BLAST of MC04g0385 vs. ExPASy TrEMBL
Match: A0A6J1C584 (trafficking protein particle complex subunit 2-like protein OS=Momordica charantia OX=3673 GN=LOC111008034 PE=4 SV=1)

HSP 1 Score: 288 bits (738), Expect = 1.39e-98
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 143
           ITSKTFAESVSTIVKSFGFSSAV
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAV 143

[Close]

BLAST of MC04g0385 vs. ExPASy TrEMBL
Match: A0A0A0K4Q0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014480 PE=4 SV=1)

HSP 1 Score: 285 bits (730), Expect = 2.31e-97
Identity = 139/143 (97.20%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 143
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of MC04g0385 vs. ExPASy TrEMBL
Match: A0A1S3BJH9 (trafficking protein particle complex subunit 2-like protein OS=Cucumis melo OX=3656 GN=LOC103490277 PE=4 SV=1)

HSP 1 Score: 285 bits (730), Expect = 2.31e-97
Identity = 139/143 (97.20%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 143
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of MC04g0385 vs. ExPASy TrEMBL
Match: A0A6J1JPT4 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111486394 PE=3 SV=1)

HSP 1 Score: 284 bits (727), Expect = 6.61e-97
Identity = 138/143 (96.50%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 143
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of MC04g0385 vs. ExPASy TrEMBL
Match: A0A6J1ERA2 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111435157 PE=3 SV=1)

HSP 1 Score: 284 bits (727), Expect = 6.61e-97
Identity = 138/143 (96.50%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 143
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]

BLAST of MC04g0385 vs. TAIR 10
Match: AT2G20930.1 (SNARE-like superfamily protein )

HSP 1 Score: 258.8 bits (660), Expect = 2.5e-69
Identity = 124/140 (88.57%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFT+ADDALKLHHIVHCSLDVIEERVNNP+KSG TLNE FLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTDADDALKLHHIVHCSLDVIEERVNNPKKSGTTLNEAFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPT NYKVYGYLTNTKVKFI+VTTDLDVRD DVRSFFR+FHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTVNYKVYGYLTNTKVKFILVTTDLDVRDTDVRSFFRKFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFS 141
           ITS+TFA++VS IV S+G +
Sbjct: 121 ITSRTFAQTVSNIVGSYGLN 140

The following BLAST results are available for this feature:

BLAST of MC04g0385 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54CU7	8.7e-35	50.36	Trafficking protein particle complex subunit 2-like protein OS=Dictyostelium dis...	[more]
Q5M8X5	7.7e-31	47.06	Trafficking protein particle complex subunit 2-like protein OS=Xenopus tropicali...	[more]
B2RYU6	1.3e-30	46.32	Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus...	[more]
Q9JME7	1.7e-30	46.32	Trafficking protein particle complex subunit 2-like protein OS=Mus musculus OX=1...	[more]
B5XGE7	1.7e-30	47.06	Trafficking protein particle complex subunit 2-like protein OS=Salmo salar OX=80...	[more]

BLAST of MC04g0385 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136317.1	2.87e-98	100.00	trafficking protein particle complex subunit 2-like protein [Momordica charantia...	[more]
XP_004144858.1	4.76e-97	97.20	trafficking protein particle complex subunit 2-like protein [Cucumis sativus] >X...	[more]
XP_022928280.1	1.37e-96	96.50	trafficking protein particle complex subunit 2-like protein [Cucurbita moschata]...	[more]
XP_031127945.1	2.56e-94	95.07	trafficking protein particle complex subunit 2-like protein [Ipomoea triloba]	[more]
XP_023872854.1	5.35e-94	95.07	trafficking protein particle complex subunit 2-like protein [Quercus suber]	[more]

BLAST of MC04g0385 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C584	1.39e-98	100.00	trafficking protein particle complex subunit 2-like protein OS=Momordica charant...	[more]
A0A0A0K4Q0	2.31e-97	97.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014480 PE=4 SV=1	[more]
A0A1S3BJH9	2.31e-97	97.20	trafficking protein particle complex subunit 2-like protein OS=Cucumis melo OX=3...	[more]
A0A6J1JPT4	6.61e-97	96.50	Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1ERA2	6.61e-97	96.50	Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MC04g0385 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20930.1	2.5e-69	88.57	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006722	Trafficking protein particle complex subunit 2	PFAM	PF04628	Sedlin_N	coord: 7..135 e-value: 1.7E-33 score: 115.5
IPR006722	Trafficking protein particle complex subunit 2	PANTHER	PTHR12403	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2	coord: 1..138
None	No IPR available	GENE3D	3.30.450.70		coord: 1..140 e-value: 7.8E-46 score: 157.1
None	No IPR available	PANTHER	PTHR12403:SF26	BNAA06G40850D PROTEIN	coord: 1..138
IPR044760	Trafficking protein particle complex subunit 2-like	CDD	cd14854	TRAPPC2L	coord: 3..134 e-value: 3.97876E-69 score: 202.82
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 2..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0385.1	MC04g0385.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030008	TRAPP complex